export PYTHON_EGG_CACHE=/home/$(whoami)/.python-eggs export link_folder=/tmp/impala-shell-python-egg-cache-$(whoami) if ! [ -L $link_folder ] then rm -Rf "$link_folder" ln -sfn ${PYTHON_EGG_CACHE}${link_folder} ${link_folder} fi #export HADOOP_USER_NAME=$2 function copydb() { export HADOOP_USER="dimitris.pierrakos" export HADOOP_USER_NAME='dimitris.pierrakos' db=$1 FILE=("hive_wf_tmp_"$RANDOM) hdfs dfs -mkdir hdfs://impala-cluster-mn1.openaire.eu:8020/tmp/$FILE/ # change ownership to impala # hdfs dfs -conf /etc/impala_cluster/hdfs-site.xml -chmod -R 777 /tmp/$FILE/${db}.db hdfs dfs -conf /etc/impala_cluster/hdfs-site.xml -chmod -R 777 /tmp/$FILE/ # copy the databases from ocean to impala echo "copying $db" hadoop distcp -Dmapreduce.map.memory.mb=6144 -pb hdfs://nameservice1/user/hive/warehouse/${db}.db hdfs://impala-cluster-mn1.openaire.eu:8020/tmp/$FILE/ hdfs dfs -conf /etc/impala_cluster/hdfs-site.xml -chmod -R 777 /tmp/$FILE/${db}.db # drop tables from db for i in `impala-shell -i impala-cluster-dn1.openaire.eu -d ${db} --delimited -q "show tables"`; do `impala-shell -i impala-cluster-dn1.openaire.eu -d ${db} -q "drop table $i;"`; done # drop views from db for i in `impala-shell -i impala-cluster-dn1.openaire.eu -d ${db} --delimited -q "show tables"`; do `impala-shell -i impala-cluster-dn1.openaire.eu -d ${db} -q "drop view $i;"`; done # delete the database impala-shell -i impala-cluster-dn1.openaire.eu -q "drop database if exists ${db} cascade"; # create the databases impala-shell -i impala-cluster-dn1.openaire.eu -q "create database ${db}"; impala-shell -q "INVALIDATE METADATA" echo "creating schema for ${db}" for (( k = 0; k < 5; k ++ )); do for i in `impala-shell -d ${db} --delimited -q "show tables"`; do impala-shell -d ${db} --delimited -q "show create table $i"; done | sed 's/"$/;/' | sed 's/^"//' | sed 's/[[:space:]]\date[[:space:]]/`date`/g' | impala-shell --user $HADOOP_USER_NAME -i impala-cluster-dn1.openaire.eu -c -f - done # load the data from /tmp in the respective tables echo "copying data in tables and computing stats" for i in `impala-shell -i impala-cluster-dn1.openaire.eu -d ${db} --delimited -q "show tables"`; do impala-shell -i impala-cluster-dn1.openaire.eu -d ${db} -q "load data inpath '/tmp/$FILE/${db}.db/$i' into table $i"; impala-shell -i impala-cluster-dn1.openaire.eu -d ${db} -q "compute stats $i"; done # deleting the remaining directory from hdfs hdfs dfs -conf /etc/impala_cluster/hdfs-site.xml -rm -R /tmp/$FILE/${db}.db } MONITOR_DB=$1 #HADOOP_USER_NAME=$2 copydb $MONITOR_DB'_institutions' copydb $MONITOR_DB