sourcePath
the working dir base path
targetPath
the final graph path
Action failed, error message[${wf:errorMessage(wf:lastErrorNode())}]
yarn
cluster
Import JSONRDD to Dataset kryo
eu.dnetlib.dhp.sx.graph.SparkConvertRDDtoDataset
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.shuffle.partitions=3000
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--masteryarn
--sourcePath${sourcePath}
--targetPath${targetPath}
yarn
cluster
Convert Entities to summaries
eu.dnetlib.dhp.sx.graph.SparkCreateSummaryObject
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.shuffle.partitions=5000
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--masteryarn
--sourcePath${targetPath}/entities
--targetPath${targetPath}/provision/summaries
yarn
cluster
Generate Scholix Dataset
eu.dnetlib.dhp.sx.graph.SparkCreateScholix
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.shuffle.partitions=6000
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--masteryarn
--summaryPath${targetPath}/provision/summaries
--targetPath${targetPath}/provision/scholix
--relationPath${targetPath}/relation
yarn
cluster
Serialize scholix to JSON
eu.dnetlib.dhp.sx.graph.SparkConvertObjectToJson
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.shuffle.partitions=6000
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--masteryarn
--sourcePath${targetPath}/provision/scholix/scholix
--targetPath${targetPath}/index/scholix_json
--objectTypescholix
yarn
cluster
Serialize summary to JSON
eu.dnetlib.dhp.sx.graph.SparkConvertObjectToJson
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.shuffle.partitions=6000
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--masteryarn
--sourcePath${targetPath}/provision/summaries_filtered
--targetPath${targetPath}/index/summaries_json
--objectTypesummary