Graph Construction [PROD] Data Provision 30 reuse cached content from the aggregation system reuseContent true set the aggregator content path contentPath /tmp/beta_aggregator Set the path containing the AGGREGATOR graph aggregatorGraphPath /tmp/beta_provision/graph/00_graph_aggregator Set the target path to store the RAW graph rawGraphPath /tmp/beta_provision/graph/01_graph_raw Set the target path to store the first CLEANED graph firstCleanedGraphPath /tmp/prod_provision/graph/02_graph_first_cleaned Set the target path to store the DEDUPED graph dedupGraphPath /tmp/beta_provision/graph/03_graph_dedup Set the target path to store the INFERRED graph inferredGraphPath /tmp/beta_provision/graph/04_graph_inferred Set the target path to store the CONSISTENCY graph consistentGraphPath /tmp/beta_provision/graph/05_graph_consistent Set the target path to store the ORCID enriched graph orcidGraphPath /tmp/beta_provision/graph/06_graph_orcid Set the target path to store the BULK TAGGED graph bulkTaggingGraphPath /tmp/beta_provision/graph/07_graph_bulktagging Set the target path to store the AFFILIATION from INSTITUTIONAL REPOS graph affiliationGraphPath /tmp/beta_provision/graph/08_graph_affiliation Set the target path to store the COMMUNITY from SELECTED SOURCES graph communityOrganizationGraphPath /tmp/beta_provision/graph/09_graph_comunity_organization Set the target path to store the FUNDING from SEMANTIC RELATION graph fundingGraphPath /tmp/beta_provision/graph/10_graph_funding Set the target path to store the COMMUNITY from SEMANTIC RELATION graph communitySemRelGraphPath /tmp/beta_provision/graph/11_graph_comunity_sem_rel Set the target path to store the COUNTRY enriched graph countryGraphPath /tmp/beta_provision/graph/12_graph_country Set the target path to store the CLEANED graph cleanedGraphPath /tmp/beta_provision/graph/13_graph_cleaned Set the target path to store the blacklisted graph blacklistedGraphPath /tmp/beta_provision/graph/14_graph_blacklisted Set the lookup address isLookUpUrl http://beta.services.openaire.eu:8280/is/services/isLookUp?wsdl Set the map of paths for the Bulk Tagging bulkTaggingPathMap {"author" : "$['author'][*]['fullname']", "title" : "$['title'][*]['value']", "orcid" : "$['author'][*]['pid'][*][?(@['key']=='ORCID')]['value']", "contributor" : "$['contributor'][*]['value']", "description" : "$['description'][*]['value']"} Set the map of associations organization, community list for the propagation of community to result through organization propagationOrganizationCommunityMap {"20|corda__h2020::3fb05a9524c3f790391261347852f638":["mes","euromarine"], "20|corda__h2020::e8dbe14cca9bf6fce09d468872f813f8":["mes","euromarine"], "20|snsf________::9b253f265e3bef5cae6d881fdf61aceb":["mes","euromarine"],"20|rcuk________::e054eea0a47665af8c3656b5785ccf76":["mes","euromarine"],"20|corda__h2020::edc18d67c9b11fb616ca9f6e1db1b151":["mes","euromarine"],"20|rcuk________::d5736d9da90521ddcdc7828a05a85e9a":["mes","euromarine"],"20|corda__h2020::f5d418d3aa1cf817ddefcc3fdc039f27":["mes","euromarine"],"20|snsf________::8fa091f8f25a846779acb4ea97b50aef":["mes","euromarine"],"20|corda__h2020::81e020977211c2c40fae2e1a50bffd71":["mes","euromarine"],"20|corda_______::81e020977211c2c40fae2e1a50bffd71":["mes","euromarine"],"20|snsf________::31d0a100e54e3cdb3c6f52d91e638c78":["mes","euromarine"],"20|corda__h2020::ea379ef91b8cc86f9ac5edc4169292db":["mes","euromarine"],"20|corda__h2020::f75ee2ee48e5cb0ec8c8d30aaa8fef70":["mes","euromarine"],"20|rcuk________::e16010089551a1a9182a94604fc0ea59":["mes","euromarine"],"20|corda__h2020::38531a2cce7c5c347ffc439b07c1f43b":["mes","euromarine"],"20|corda_______::38531a2cce7c5c347ffc439b07c1f43b":["mes","euromarine"],"20|grid________::b2cbbf5eadbbf87d534b022bad3191d7":["mes","euromarine"],"20|snsf________::74730ef1439d7f7636a8be58a6b471b8":["mes","euromarine"],"20|nsf_________::ad72e19043a5a467e35f9b444d11563e":["mes","euromarine"],"20|rcuk________::0fc3e92500290902a2d38ec2445e74c3":["mes","euromarine"],"20|grid________::ad2c29905da0eb3c06b3fa80cacd89ea":["mes","euromarine"],"20|corda__h2020::30b53e4d63d3724f00acb9cbaca40860":["mes","euromarine"],"20|corda__h2020::f60f84bee14ad93f0db0e49af1d5c317":["mes","euromarine"], "20|corda__h2020::7bf251ac3765b5e89d82270a1763d09f":["mes","euromarine"], "20|corda__h2020::65531bd11be9935948c7f2f4db1c1832":["mes","euromarine"], "20|corda__h2020::e0e98f86bbc76638bbb72a8fe2302946":["mes","euromarine"], "20|snsf________::3eb43582ac27601459a8d8b3e195724b":["mes","euromarine"], "20|corda__h2020::af2481dab65d06c8ea0ae02b5517b9b6":["mes","euromarine"], "20|corda__h2020::c19d05cfde69a50d3ebc89bd0ee49929":["mes","euromarine"], "20|corda__h2020::af0bfd9fc09f80d9488f56d71a9832f0":["mes","euromarine"], "20|rcuk________::f33c02afb0dc66c49d0ed97ca5dd5cb0":["beopen"], "20|grid________::a867f78acdc5041b34acfe4f9a349157":["beopen"], "20|grid________::7bb116a1a9f95ab812bf9d2dea2be1ff":["beopen"], "20|corda__h2020::6ab0e0739dbe625b99a2ae45842164ad":["beopen"], "20|corda__h2020::8ba50792bc5f4d51d79fca47d860c602":["beopen"], "20|corda_______::8ba50792bc5f4d51d79fca47d860c602":["beopen"], "20|corda__h2020::e70e9114979e963eef24666657b807c3":["beopen"], "20|corda_______::e70e9114979e963eef24666657b807c3":["beopen"], "20|corda_______::15911e01e9744d57205825d77c218737":["beopen"], "20|opendoar____::056a41e24e2a9a67215e87bbee6a80ab":["beopen"], "20|opendoar____::7f67f2e6c6fbb0628f8160fcd3d92ae3":["beopen"], "20|grid________::a8ecfd7c084e561168bcbe6bf0daf3e3":["beopen"], "20|corda_______::7bbe6cc5d8ec1864739a04b0d020c9e9":["beopen"], "20|corda_______::3ff558e30c2e434d688539548300b050":["beopen"], "20|corda__h2020::5ffee5b3b83b33a8cf0e046877bd3a39":["beopen"], "20|corda__h2020::5187217e2e806a6df3579c46f82401bc":["beopen"], "20|grid________::5fa7e2709bcd945e26bfa18689adeec1":["beopen"], "20|corda_______::d8696683c53027438031a96ad27c3c07":["beopen"], "20|corda__h2020::d8696683c53027438031a96ad27c3c07":["beopen"], "20|rcuk________::23a79ebdfa59790864e4a485881568c1":["beopen"], "20|corda__h2020::b76cf8fe49590a966953c37e18608af9":["beopen"], "20|grid________::d2f0204126ee709244a488a4cd3b91c2":["beopen"], "20|corda__h2020::05aba9d2ed17533d15221e5655ac11e6":["beopen"], "20|grid________::802401579481dc32062bdee69f5e6a34":["beopen"], "20|corda__h2020::3f6d9d54cac975a517ba6b252c81582d":["beopen"]} Set the dedup orchestrator name dedupConfig decisiontree-dedup-test declares the ActionSet ids to promote in the RAW graph actionSetIdsRawGraph scholexplorer-dump,gridac-dump,doiboost-organizations,doiboost,orcidworks-no-doi,iis-wos-entities,iis-entities-software,iis-entities-patent declares the ActionSet ids to promote in the INFERRED graph actionSetIdsIISGraph iis-researchinitiative,iis-document-citations,iis-document-affiliation,iis-document-classes,iis-document-similarities,iis-referenced-datasets-main,iis-referenced-datasets-preprocessing,iis-referenced-projects-main,iis-referenced-projects-preprocessing,iis-referenceextraction-pdb,document_software_url,iis-extracted-metadata,iis-communities,iis-referenced-patents,iis-covid-19 wait configurations create the AGGREGATOR graph executeOozieJob IIS { 'graphOutputPath' : 'aggregatorGraphPath', 'isLookupUrl' : 'isLookUpUrl', 'reuseContent' : 'reuseContent', 'contentPath' : 'contentPath' } { 'oozie.wf.application.path' : '/lib/dnet/oa/graph/raw_all/oozie_app', 'mongoURL' : 'mongodb://beta.services.openaire.eu', 'mongoDb' : 'mdstore', 'postgresURL' : 'jdbc:postgresql://beta.services.openaire.eu:5432/dnet_openaireplus', 'postgresUser' : 'dnet', 'postgresPassword' : '', 'workingDir' : '/tmp/beta_provision/working_dir/aggregator' } build-report create the RAW graph executeOozieJob IIS { 'inputActionSetIds' : 'actionSetIdsRawGraph', 'inputGraphRootPath' : 'aggregatorGraphPath', 'outputGraphRootPath' : 'rawGraphPath', 'isLookupUrl' : 'isLookUpUrl' } { 'oozie.wf.application.path' : '/lib/dnet/actionmanager/wf/main/oozie_app', 'sparkExecutorCores' : '3', 'sparkExecutorMemory' : '10G', 'activePromoteDatasetActionPayload' : 'true', 'activePromoteDatasourceActionPayload' : 'true', 'activePromoteOrganizationActionPayload' : 'true', 'activePromoteOtherResearchProductActionPayload' : 'true', 'activePromoteProjectActionPayload' : 'true', 'activePromotePublicationActionPayload' : 'true', 'activePromoteRelationActionPayload' : 'true', 'activePromoteResultActionPayload' : 'true', 'activePromoteSoftwareActionPayload' : 'true', 'mergeAndGetStrategy' : 'MERGE_FROM_AND_GET', 'workingDir' : '/tmp/beta_provision/working_dir/promoteActionsRaw' } build-report clean the properties in the graph typed as Qualifier according to the vocabulary indicated in schemeid executeOozieJob IIS { 'graphInputPath' : 'rawGraphPath', 'graphOutputPath': 'firstCleanedGraphPath', 'isLookupUrl': 'isLookUpUrl' } { 'oozie.wf.application.path' : '/lib/dnet/oa/graph/clean/oozie_app', 'workingPath' : '/tmp/beta_provision/working_dir/first_clean' } build-report search for duplicates in the raw graph executeOozieJob IIS { 'actionSetId' : 'dedupConfig', 'graphBasePath' : 'firstCleanedGraphPath', 'dedupGraphPath': 'dedupGraphPath', 'isLookUpUrl' : 'isLookUpUrl' } { 'oozie.wf.application.path' : '/lib/dnet/oa/dedup/scan/oozie_app', 'workingPath' : '/tmp/beta_provision/working_dir/dedup' } build-report create the INFERRED graph executeOozieJob IIS { 'inputActionSetIds' : 'actionSetIdsIISGraph', 'inputGraphRootPath' : 'dedupGraphPath', 'outputGraphRootPath' : 'inferredGraphPath', 'isLookupUrl' : 'isLookUpUrl' } { 'oozie.wf.application.path' : '/lib/dnet/actionmanager/wf/main/oozie_app', 'sparkExecutorCores' : '3', 'sparkExecutorMemory' : '10G', 'activePromoteDatasetActionPayload' : 'true', 'activePromoteDatasourceActionPayload' : 'true', 'activePromoteOrganizationActionPayload' : 'true', 'activePromoteOtherResearchProductActionPayload' : 'true', 'activePromoteProjectActionPayload' : 'true', 'activePromotePublicationActionPayload' : 'true', 'activePromoteRelationActionPayload' : 'true', 'activePromoteResultActionPayload' : 'true', 'activePromoteSoftwareActionPayload' : 'true', 'mergeAndGetStrategy' : 'MERGE_FROM_AND_GET', 'workingDir' : '/tmp/beta_provision/working_dir/promoteActionsIIS' } build-report mark duplicates as deleted and redistribute the relationships executeOozieJob IIS { 'graphBasePath' : 'inferredGraphPath', 'dedupGraphPath': 'consistentGraphPath' } { 'oozie.wf.application.path' : '/lib/dnet/oa/dedup/consistency/oozie_app', 'workingPath' : '/tmp/beta_provision/working_dir/dedup' } build-report propagates ORCID among results linked by allowedsemrels semantic relationships executeOozieJob IIS { 'sourcePath' : 'consistentGraphPath', 'outputPath': 'orcidGraphPath' } { 'oozie.wf.application.path' : '/lib/dnet/oa/enrichment/orcidtoresultfromsemrel/oozie_app', 'workingDir' : '/tmp/beta_provision/working_dir/orcid', 'allowedsemrels' : 'isSupplementedBy;isSupplementTo', 'saveGraph' : 'true' } build-report mark results respecting some rules as belonging to communities executeOozieJob IIS { 'sourcePath' : 'orcidGraphPath', 'outputPath': 'bulkTaggingGraphPath', 'isLookUpUrl' : 'isLookUpUrl', 'pathMap' : 'bulkTaggingPathMap' } { 'oozie.wf.application.path' : '/lib/dnet/oa/enrichment/bulktag/oozie_app', 'workingDir' : '/tmp/beta_provision/working_dir/bulktag' } build-report creates relashionships between results and organizations when the organizations are associated to institutional repositories executeOozieJob IIS { 'sourcePath' : 'bulkTaggingGraphPath', 'outputPath': 'affiliationGraphPath' } { 'oozie.wf.application.path' : '/lib/dnet/oa/enrichment/affiliation/oozie_app', 'workingDir' : '/tmp/beta_provision/working_dir/affiliation', 'saveGraph' : 'true' } build-report marks as belonging to communities the result collected from datasources related to the organizations specified in the organizationCommunityMap executeOozieJob IIS { 'sourcePath' : 'affiliationGraphPath', 'outputPath': 'communityOrganizationGraphPath', 'organizationtoresultcommunitymap': 'propagationOrganizationCommunityMap' } { 'oozie.wf.application.path' : '/lib/dnet/oa/enrichment/community_organization/oozie_app', 'workingDir' : '/tmp/beta_provision/working_dir/community_organization', 'saveGraph' : 'true' } build-report created relation between projects and results linked to other results trough allowedsemrel semantic relations linked to projects executeOozieJob IIS { 'sourcePath' : 'communityOrganizationGraphPath', 'outputPath': 'fundingGraphPath' } { 'oozie.wf.application.path' : '/lib/dnet/oa/enrichment/funding/oozie_app', 'workingDir' : '/tmp/beta_provision/working_dir/funding', 'allowedsemrels' : 'isSupplementedBy;isSupplementTo', 'saveGraph' : 'true' } build-report tag as belonging to communitites result in in allowedsemrels relation with other result already linked to communities executeOozieJob IIS { 'sourcePath' : 'fundingGraphPath', 'outputPath': 'communitySemRelGraphPath', 'isLookUpUrl' : 'isLookUpUrl' } { 'oozie.wf.application.path' : '/lib/dnet/oa/enrichment/community_semrel/oozie_app', 'workingDir' : '/tmp/beta_provision/working_dir/community_semrel', 'allowedsemrels' : 'isSupplementedBy;isSupplementTo', 'saveGraph' : 'true' } build-report associated to results colleced from allowedtypes and those in the whithelist the country of the organization(s) handling the datasource it is collected from executeOozieJob IIS { 'sourcePath' : 'communitySemRelGraphPath', 'outputPath': 'countryGraphPath' } { 'oozie.wf.application.path' : '/lib/dnet/oa/enrichment/country/oozie_app', 'sparkExecutorCores' : '3', 'sparkExecutorMemory' : '10G', 'workingDir' : '/tmp/beta_provision/working_dir/country', 'allowedtypes' : 'pubsrepository::institutional', 'whitelist' : '10|opendoar____::300891a62162b960cf02ce3827bb363c', 'saveGraph' : 'true' } build-report clean the properties in the graph typed as Qualifier according to the vocabulary indicated in schemeid executeOozieJob IIS { 'graphInputPath' : 'countryGraphPath', 'graphOutputPath': 'cleanedGraphPath', 'isLookupUrl': 'isLookUpUrl' } { 'oozie.wf.application.path' : '/lib/dnet/oa/graph/clean/oozie_app', 'workingPath' : '/tmp/beta_provision/working_dir/clean' } build-report removes blacklisted relations executeOozieJob IIS { 'sourcePath' : 'cleanedGraphPath', 'outputPath': 'blacklistedGraphPath' } { 'oozie.wf.application.path' : '/lib/dnet/oa/enrichment/blacklist/oozie_app', 'workingDir' : '/tmp/beta_provision/working_dir/blacklist', 'postgresURL' : 'jdbc:postgresql://beta.services.openaire.eu:5432/dnet_openaireplus', 'postgresUser' : 'dnet', 'postgresPassword' : '' } build-report wf_20200615_163630_609 2020-06-15T17:08:00+00:00 SUCCESS