sourcePath
the source path
isLookUpUrl
the isLookup service endpoint
outputPath
the output path
accessToken
the access token used for the deposition in Zenodo
connectionUrl
the connection url for Zenodo
metadata
the metadata associated to the deposition
depositionType
one among {new, update, version}
conceptRecordId
for new version, the id of the record for the old deposition
hiveDbName
the target hive database name
hiveJdbcUrl
hive server jdbc url
hiveMetastoreUris
hive server metastore URIs
sparkDriverMemory
memory for driver process
sparkExecutorMemory
memory for individual executor
sparkExecutorCores
number of cores used by single executor
oozieActionShareLibForSpark2
oozie action sharelib for spark 2.*
spark2ExtraListeners
com.cloudera.spark.lineage.NavigatorAppListener
spark 2.* extra listeners classname
spark2SqlQueryExecutionListeners
com.cloudera.spark.lineage.NavigatorQueryListener
spark 2.* sql query execution listeners classname
spark2YarnHistoryServerAddress
spark 2.* yarn history server address
spark2EventLogDir
spark 2.* event log dir location
${jobTracker}
${nameNode}
mapreduce.job.queuename
${queueName}
oozie.launcher.mapred.job.queue.name
${oozieLauncherQueueName}
oozie.action.sharelib.for.spark
${oozieActionShareLibForSpark2}
Action failed, error message[${wf:errorMessage(wf:lastErrorNode())}]
eu.dnetlib.dhp.oa.graph.dump.SaveCommunityMap
--outputPath${workingDir}/communityMap
--nameNode${nameNode}
--isLookUpUrl${isLookUpUrl}
yarn
cluster
Dump table publication for community related products
eu.dnetlib.dhp.oa.graph.dump.community.SparkDumpCommunityProducts
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${sourcePath}/publication
--resultTableNameeu.dnetlib.dhp.schema.oaf.Publication
--outputPath${workingDir}/publication
--communityMapPath${workingDir}/communityMap
yarn
cluster
Dump table dataset for community related products
eu.dnetlib.dhp.oa.graph.dump.community.SparkDumpCommunityProducts
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${sourcePath}/dataset
--resultTableNameeu.dnetlib.dhp.schema.oaf.Dataset
--outputPath${workingDir}/dataset
--communityMapPath${workingDir}/communityMap
yarn
cluster
Dump table ORP for community related products
eu.dnetlib.dhp.oa.graph.dump.community.SparkDumpCommunityProducts
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${sourcePath}/otherresearchproduct
--resultTableNameeu.dnetlib.dhp.schema.oaf.OtherResearchProduct
--outputPath${workingDir}/otherresearchproduct
--communityMapPath${workingDir}/communityMap
yarn
cluster
Dump table software for community related products
eu.dnetlib.dhp.oa.graph.dump.community.SparkDumpCommunityProducts
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${sourcePath}/software
--resultTableNameeu.dnetlib.dhp.schema.oaf.Software
--outputPath${workingDir}/software
--communityMapPath${workingDir}/communityMap
yarn
cluster
Prepare association result subset of project info
eu.dnetlib.dhp.oa.graph.dump.community.SparkPrepareResultProject
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${sourcePath}
--outputPath${workingDir}/preparedInfo
yarn
cluster
Extend dumped publications with information about project
eu.dnetlib.dhp.oa.graph.dump.community.SparkUpdateProjectInfo
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${workingDir}/publication
--outputPath${workingDir}/ext/publication
--preparedInfoPath${workingDir}/preparedInfo
yarn
cluster
Extend dumped dataset with information about project
eu.dnetlib.dhp.oa.graph.dump.community.SparkUpdateProjectInfo
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${workingDir}/dataset
--outputPath${workingDir}/ext/dataset
--preparedInfoPath${workingDir}/preparedInfo
yarn
cluster
Extend dumped ORP with information about project
eu.dnetlib.dhp.oa.graph.dump.community.SparkUpdateProjectInfo
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${workingDir}/otherresearchproduct
--outputPath${workingDir}/ext/orp
--preparedInfoPath${workingDir}/preparedInfo
yarn
cluster
Extend dumped software with information about project
eu.dnetlib.dhp.oa.graph.dump.community.SparkUpdateProjectInfo
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${workingDir}/software
--outputPath${workingDir}/ext/software
--preparedInfoPath${workingDir}/preparedInfo
yarn
cluster
Split dumped result for community
eu.dnetlib.dhp.oa.graph.dump.community.SparkSplitForCommunity
dhp-graph-mapper-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--sourcePath${workingDir}/ext
--outputPath${workingDir}/split
--communityMapPath${workingDir}/communityMap
eu.dnetlib.dhp.oa.graph.dump.MakeTar
--hdfsPath${outputPath}
--nameNode${nameNode}
--sourcePath${workingDir}/split
eu.dnetlib.dhp.oa.graph.dump.SendToZenodoHDFS
--hdfsPath${outputPath}
--nameNode${nameNode}
--accessToken${accessToken}
--connectionUrl${connectionUrl}
--metadata${metadata}
--communityMapPath${workingDir}/communityMap
--conceptRecordId${conceptRecordId}
--depositionId${depositionId}
--depositionType${depositionType}