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[stats wf] indicators across stats dbs & updates in the org ids #248

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dimitris.pierrakos wants to merge 1742 commits from beta into beta2master_sept_2022
pull from: beta
merge into: D-Net:beta2master_sept_2022
Conversation 3 Commits 1742 Files Changed 1525 +5 -8
1 changed files with 5 additions and 8 deletions
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Showing only changes of commit 84a58802ab - Show all commits

13
dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/actionmanager/opencitations/CreateActionSetSparkJob.java
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@ -7,6 +7,7 @@ import java.io.IOException;
import java.io.Serializable;
import java.util.*;
import eu.dnetlib.dhp.schema.oaf.utils.*;
import org.apache.commons.cli.ParseException;
import org.apache.commons.io.IOUtils;
import org.apache.hadoop.io.Text;
@ -29,10 +30,6 @@ import eu.dnetlib.dhp.application.ArgumentApplicationParser;
import eu.dnetlib.dhp.schema.action.AtomicAction;
import eu.dnetlib.dhp.schema.common.ModelConstants;
import eu.dnetlib.dhp.schema.oaf.*;
import eu.dnetlib.dhp.schema.oaf.utils.CleaningFunctions;
import eu.dnetlib.dhp.schema.oaf.utils.IdentifierFactory;
import eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils;
import eu.dnetlib.dhp.schema.oaf.utils.PidType;
import eu.dnetlib.dhp.utils.DHPUtils;
import scala.Tuple2;
@ -136,19 +133,19 @@ public class CreateActionSetSparkJob implements Serializable {
prefix = DOI_PREFIX;
citing = prefix
+ IdentifierFactory
.md5(CleaningFunctions.normalizePidValue(PidType.doi.toString(), value.getCiting()));
.md5(PidCleaner.normalizePidValue(PidType.doi.toString(), value.getCiting()));
cited = prefix
+ IdentifierFactory
.md5(CleaningFunctions.normalizePidValue(PidType.doi.toString(), value.getCited()));
.md5(PidCleaner.normalizePidValue(PidType.doi.toString(), value.getCited()));
break;
case POCI:
prefix = PMID_PREFIX;
citing = prefix
+ IdentifierFactory
.md5(CleaningFunctions.normalizePidValue(PidType.pmid.toString(), value.getCiting()));
.md5(PidCleaner.normalizePidValue(PidType.pmid.toString(), value.getCiting()));
cited = prefix
+ IdentifierFactory
.md5(CleaningFunctions.normalizePidValue(PidType.pmid.toString(), value.getCited()));
.md5(PidCleaner.normalizePidValue(PidType.pmid.toString(), value.getCited()));
break;
default:
throw new IllegalStateException("Invalid prefix: " + p);