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[stats wf] indicators across stats dbs & updates in the org ids #248

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dimitris.pierrakos wants to merge 1742 commits from beta into beta2master_sept_2022
pull from: beta
merge into: D-Net:beta2master_sept_2022
Conversation 3 Commits 1742 Files Changed 1525 +8 -2
2 changed files with 8 additions and 2 deletions
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Showing only changes of commit 2f3cf6d0e7 - Show all commits

4
dhp-common/src/main/java/eu/dnetlib/dhp/schema/oaf/utils/PmidCleaningRule.java
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@ -7,7 +7,7 @@ import java.util.regex.Pattern;
// https://researchguides.stevens.edu/c.php?g=442331&p=6577176 // https://researchguides.stevens.edu/c.php?g=442331&p=6577176
public class PmidCleaningRule { public class PmidCleaningRule {
public static final Pattern PATTERN = Pattern.compile("[1-9]{1,8}"); public static final Pattern PATTERN = Pattern.compile("0*(\\d{1,8})");
public static String clean(String pmid) { public static String clean(String pmid) {
String s = pmid String s = pmid
@ -17,7 +17,7 @@ public class PmidCleaningRule {
final Matcher m = PATTERN.matcher(s); final Matcher m = PATTERN.matcher(s);
if (m.find()) { if (m.find()) {
return m.group(); return m.group(1);
} }
return ""; return "";
} }

6
dhp-common/src/test/java/eu/dnetlib/dhp/schema/oaf/utils/PmidCleaningRuleTest.java
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@ -9,10 +9,16 @@ class PmidCleaningRuleTest {
@Test @Test
void testCleaning() { void testCleaning() {
// leading zeros are removed
assertEquals("1234", PmidCleaningRule.clean("01234")); assertEquals("1234", PmidCleaningRule.clean("01234"));
// tolerant to spaces in the middle
assertEquals("1234567", PmidCleaningRule.clean("0123 4567")); assertEquals("1234567", PmidCleaningRule.clean("0123 4567"));
// stop parsing at first not numerical char
assertEquals("123", PmidCleaningRule.clean("0123x4567")); assertEquals("123", PmidCleaningRule.clean("0123x4567"));
// invalid id leading to empty result
assertEquals("", PmidCleaningRule.clean("abc")); assertEquals("", PmidCleaningRule.clean("abc"));
// valid id with zeroes in the number
assertEquals("20794075", PmidCleaningRule.clean("20794075"));
} }
} }