master #2
|
@ -3,8 +3,13 @@ package eu.dnetlib.dhp.migration;
|
||||||
import java.io.Closeable;
|
import java.io.Closeable;
|
||||||
import java.io.IOException;
|
import java.io.IOException;
|
||||||
import java.net.URI;
|
import java.net.URI;
|
||||||
|
import java.util.ArrayList;
|
||||||
|
import java.util.Arrays;
|
||||||
|
import java.util.List;
|
||||||
import java.util.concurrent.atomic.AtomicInteger;
|
import java.util.concurrent.atomic.AtomicInteger;
|
||||||
|
import java.util.stream.Collectors;
|
||||||
|
|
||||||
|
import org.apache.commons.lang3.StringUtils;
|
||||||
import org.apache.hadoop.conf.Configuration;
|
import org.apache.hadoop.conf.Configuration;
|
||||||
import org.apache.hadoop.fs.FileSystem;
|
import org.apache.hadoop.fs.FileSystem;
|
||||||
import org.apache.hadoop.fs.Path;
|
import org.apache.hadoop.fs.Path;
|
||||||
|
@ -13,7 +18,17 @@ import org.apache.hadoop.io.SequenceFile;
|
||||||
import org.apache.hadoop.io.Text;
|
import org.apache.hadoop.io.Text;
|
||||||
import org.codehaus.jackson.map.ObjectMapper;
|
import org.codehaus.jackson.map.ObjectMapper;
|
||||||
|
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.DataInfo;
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.ExtraInfo;
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.Field;
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.Journal;
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.KeyValue;
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.OAIProvenance;
|
||||||
import eu.dnetlib.dhp.schema.oaf.Oaf;
|
import eu.dnetlib.dhp.schema.oaf.Oaf;
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.OriginDescription;
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.Qualifier;
|
||||||
|
import eu.dnetlib.dhp.schema.oaf.StructuredProperty;
|
||||||
|
import eu.dnetlib.dhp.utils.DHPUtils;
|
||||||
|
|
||||||
public class AbstractMigrateApplication implements Closeable {
|
public class AbstractMigrateApplication implements Closeable {
|
||||||
|
|
||||||
|
@ -58,4 +73,136 @@ public class AbstractMigrateApplication implements Closeable {
|
||||||
writer.close();
|
writer.close();
|
||||||
}
|
}
|
||||||
|
|
||||||
|
public static KeyValue keyValue(final String k, final String v) {
|
||||||
|
final KeyValue kv = new KeyValue();
|
||||||
|
kv.setKey(k);
|
||||||
|
kv.setValue(v);
|
||||||
|
return kv;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static List<KeyValue> listKeyValues(final String... s) {
|
||||||
|
if (s.length % 2 > 0) { throw new RuntimeException("Invalid number of parameters (k,v,k,v,....)"); }
|
||||||
|
|
||||||
|
final List<KeyValue> list = new ArrayList<>();
|
||||||
|
for (int i = 0; i < s.length; i += 2) {
|
||||||
|
list.add(keyValue(s[i], s[i + 1]));
|
||||||
|
}
|
||||||
|
return list;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static <T> Field<T> field(final T value, final DataInfo info) {
|
||||||
|
final Field<T> field = new Field<>();
|
||||||
|
field.setValue(value);
|
||||||
|
field.setDataInfo(info);
|
||||||
|
return field;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static List<Field<String>> listFields(final DataInfo info, final String... values) {
|
||||||
|
return Arrays.stream(values).map(v -> field(v, info)).collect(Collectors.toList());
|
||||||
|
}
|
||||||
|
|
||||||
|
public static Qualifier qualifier(final String classid, final String classname, final String schemeid, final String schemename) {
|
||||||
|
final Qualifier q = new Qualifier();
|
||||||
|
q.setClassid(classid);
|
||||||
|
q.setClassname(classname);
|
||||||
|
q.setSchemeid(schemeid);
|
||||||
|
q.setSchemename(schemename);
|
||||||
|
return q;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static StructuredProperty structuredProperty(final String value,
|
||||||
|
final String classid,
|
||||||
|
final String classname,
|
||||||
|
final String schemeid,
|
||||||
|
final String schemename,
|
||||||
|
final DataInfo dataInfo) {
|
||||||
|
final StructuredProperty sp = new StructuredProperty();
|
||||||
|
sp.setValue(value);
|
||||||
|
sp.setQualifier(qualifier(classid, classname, schemeid, schemename));
|
||||||
|
sp.setDataInfo(dataInfo);
|
||||||
|
return sp;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static ExtraInfo extraInfo(final String name, final String value, final String typology, final String provenance, final String trust) {
|
||||||
|
final ExtraInfo info = new ExtraInfo();
|
||||||
|
info.setName(name);
|
||||||
|
info.setValue(value);
|
||||||
|
info.setTypology(typology);
|
||||||
|
info.setProvenance(provenance);
|
||||||
|
info.setTrust(trust);
|
||||||
|
return info;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static OAIProvenance oaiIProvenance(final String identifier,
|
||||||
|
final String baseURL,
|
||||||
|
final String metadataNamespace,
|
||||||
|
final Boolean altered,
|
||||||
|
final String datestamp,
|
||||||
|
final String harvestDate) {
|
||||||
|
|
||||||
|
final OriginDescription desc = new OriginDescription();
|
||||||
|
desc.setIdentifier(identifier);
|
||||||
|
desc.setBaseURL(baseURL);
|
||||||
|
desc.setMetadataNamespace(metadataNamespace);
|
||||||
|
desc.setAltered(altered);
|
||||||
|
desc.setDatestamp(datestamp);
|
||||||
|
desc.setHarvestDate(harvestDate);
|
||||||
|
|
||||||
|
final OAIProvenance p = new OAIProvenance();
|
||||||
|
p.setOriginDescription(desc);
|
||||||
|
|
||||||
|
return p;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static Journal journal(final String name,
|
||||||
|
final String issnPrinted,
|
||||||
|
final String issnOnline,
|
||||||
|
final String issnLinking,
|
||||||
|
final String ep,
|
||||||
|
final String iss,
|
||||||
|
final String sp,
|
||||||
|
final String vol,
|
||||||
|
final String edition,
|
||||||
|
final String conferenceplace,
|
||||||
|
final String conferencedate,
|
||||||
|
final DataInfo dataInfo) {
|
||||||
|
final Journal j = new Journal();
|
||||||
|
j.setName(name);
|
||||||
|
j.setIssnPrinted(issnPrinted);
|
||||||
|
j.setIssnOnline(issnOnline);
|
||||||
|
j.setIssnLinking(issnLinking);
|
||||||
|
j.setEp(ep);
|
||||||
|
j.setIss(iss);
|
||||||
|
j.setSp(sp);
|
||||||
|
j.setVol(vol);
|
||||||
|
j.setEdition(edition);
|
||||||
|
j.setConferenceplace(conferenceplace);
|
||||||
|
j.setConferencedate(conferencedate);
|
||||||
|
j.setDataInfo(dataInfo);
|
||||||
|
return j;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static DataInfo dataInfo(final Boolean deletedbyinference,
|
||||||
|
final String inferenceprovenance,
|
||||||
|
final Boolean inferred,
|
||||||
|
final Boolean invisible,
|
||||||
|
final Qualifier provenanceaction,
|
||||||
|
final String trust) {
|
||||||
|
final DataInfo d = new DataInfo();
|
||||||
|
d.setDeletedbyinference(deletedbyinference);
|
||||||
|
d.setInferenceprovenance(inferenceprovenance);
|
||||||
|
d.setInferred(inferred);
|
||||||
|
d.setInvisible(invisible);
|
||||||
|
d.setProvenanceaction(provenanceaction);
|
||||||
|
d.setTrust(trust);
|
||||||
|
return d;
|
||||||
|
}
|
||||||
|
|
||||||
|
public static String createOpenaireId(final String prefix, final String originalId) {
|
||||||
|
final String nsPrefix = StringUtils.substringBefore(originalId, "::");
|
||||||
|
final String rest = StringUtils.substringAfter(originalId, "::");
|
||||||
|
return String.format("%s|%s::%s", prefix, nsPrefix, DHPUtils.md5(rest));
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
|
@ -30,8 +30,8 @@ import eu.dnetlib.dhp.schema.oaf.StructuredProperty;
|
||||||
|
|
||||||
public class MigrateDbEntitiesApplication extends AbstractMigrateApplication implements Closeable {
|
public class MigrateDbEntitiesApplication extends AbstractMigrateApplication implements Closeable {
|
||||||
|
|
||||||
private static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION = MigrationUtils
|
private static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION =
|
||||||
.qualifier("sysimport:crosswalk:entityregistry", "sysimport:crosswalk:entityregistry", "dnet:provenance_actions", "dnet:provenance_actions");
|
qualifier("sysimport:crosswalk:entityregistry", "sysimport:crosswalk:entityregistry", "dnet:provenance_actions", "dnet:provenance_actions");
|
||||||
|
|
||||||
private static final Log log = LogFactory.getLog(MigrateDbEntitiesApplication.class);
|
private static final Log log = LogFactory.getLog(MigrateDbEntitiesApplication.class);
|
||||||
|
|
||||||
|
@ -82,9 +82,9 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
|
|
||||||
final Datasource ds = new Datasource();
|
final Datasource ds = new Datasource();
|
||||||
|
|
||||||
ds.setId(MigrationUtils.createOpenaireId("10", rs.getString("datasourceid")));
|
ds.setId(createOpenaireId("10", rs.getString("datasourceid")));
|
||||||
ds.setOriginalId(Arrays.asList(rs.getString("datasourceid")));
|
ds.setOriginalId(Arrays.asList(rs.getString("datasourceid")));
|
||||||
ds.setCollectedfrom(MigrationUtils.listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname")));
|
ds.setCollectedfrom(listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname")));
|
||||||
ds.setPid(null); // List<StructuredProperty> // TODO
|
ds.setPid(null); // List<StructuredProperty> // TODO
|
||||||
ds.setDateofcollection(rs.getDate("dateofcollection").toString());
|
ds.setDateofcollection(rs.getDate("dateofcollection").toString());
|
||||||
ds.setDateoftransformation(null); // Value not returned by the SQL query
|
ds.setDateoftransformation(null); // Value not returned by the SQL query
|
||||||
|
@ -92,37 +92,37 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
ds.setOaiprovenance(null); // Values not present in the DB
|
ds.setOaiprovenance(null); // Values not present in the DB
|
||||||
ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype")));
|
ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype")));
|
||||||
ds.setOpenairecompatibility(prepareQualifierSplitting(rs.getString("openairecompatibility")));
|
ds.setOpenairecompatibility(prepareQualifierSplitting(rs.getString("openairecompatibility")));
|
||||||
ds.setOfficialname(MigrationUtils.field(rs.getString("officialname"), info));
|
ds.setOfficialname(field(rs.getString("officialname"), info));
|
||||||
ds.setEnglishname(MigrationUtils.field(rs.getString("englishname"), info));
|
ds.setEnglishname(field(rs.getString("englishname"), info));
|
||||||
ds.setWebsiteurl(MigrationUtils.field(rs.getString("websiteurl"), info));
|
ds.setWebsiteurl(field(rs.getString("websiteurl"), info));
|
||||||
ds.setLogourl(MigrationUtils.field(rs.getString("logourl"), info));
|
ds.setLogourl(field(rs.getString("logourl"), info));
|
||||||
ds.setContactemail(MigrationUtils.field(rs.getString("contactemail"), info));
|
ds.setContactemail(field(rs.getString("contactemail"), info));
|
||||||
ds.setNamespaceprefix(MigrationUtils.field(rs.getString("namespaceprefix"), info));
|
ds.setNamespaceprefix(field(rs.getString("namespaceprefix"), info));
|
||||||
ds.setLatitude(MigrationUtils.field(Double.toString(rs.getDouble("latitude")), info));
|
ds.setLatitude(field(Double.toString(rs.getDouble("latitude")), info));
|
||||||
ds.setLongitude(MigrationUtils.field(Double.toString(rs.getDouble("longitude")), info));
|
ds.setLongitude(field(Double.toString(rs.getDouble("longitude")), info));
|
||||||
ds.setDateofvalidation(MigrationUtils.field(rs.getDate("dateofvalidation").toString(), info));
|
ds.setDateofvalidation(field(rs.getDate("dateofvalidation").toString(), info));
|
||||||
ds.setDescription(MigrationUtils.field(rs.getString("description"), info));
|
ds.setDescription(field(rs.getString("description"), info));
|
||||||
ds.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info));
|
ds.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info));
|
||||||
ds.setOdnumberofitems(MigrationUtils.field(Double.toString(rs.getInt("odnumberofitems")), info));
|
ds.setOdnumberofitems(field(Double.toString(rs.getInt("odnumberofitems")), info));
|
||||||
ds.setOdnumberofitemsdate(MigrationUtils.field(rs.getDate("odnumberofitemsdate").toString(), info));
|
ds.setOdnumberofitemsdate(field(rs.getDate("odnumberofitemsdate").toString(), info));
|
||||||
ds.setOdpolicies(MigrationUtils.field(rs.getString("odpolicies"), info));
|
ds.setOdpolicies(field(rs.getString("odpolicies"), info));
|
||||||
ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info));
|
ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info));
|
||||||
ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info));
|
ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info));
|
||||||
ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info));
|
ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info));
|
||||||
ds.setReleasestartdate(MigrationUtils.field(rs.getDate("releasestartdate").toString(), info));
|
ds.setReleasestartdate(field(rs.getDate("releasestartdate").toString(), info));
|
||||||
ds.setReleaseenddate(MigrationUtils.field(rs.getDate("releaseenddate").toString(), info));
|
ds.setReleaseenddate(field(rs.getDate("releaseenddate").toString(), info));
|
||||||
ds.setMissionstatementurl(MigrationUtils.field(rs.getString("missionstatementurl"), info));
|
ds.setMissionstatementurl(field(rs.getString("missionstatementurl"), info));
|
||||||
ds.setDataprovider(MigrationUtils.field(rs.getBoolean("dataprovider"), info));
|
ds.setDataprovider(field(rs.getBoolean("dataprovider"), info));
|
||||||
ds.setServiceprovider(MigrationUtils.field(rs.getBoolean("serviceprovider"), info));
|
ds.setServiceprovider(field(rs.getBoolean("serviceprovider"), info));
|
||||||
ds.setDatabaseaccesstype(MigrationUtils.field(rs.getString("databaseaccesstype"), info));
|
ds.setDatabaseaccesstype(field(rs.getString("databaseaccesstype"), info));
|
||||||
ds.setDatauploadtype(MigrationUtils.field(rs.getString("datauploadtype"), info));
|
ds.setDatauploadtype(field(rs.getString("datauploadtype"), info));
|
||||||
ds.setDatabaseaccessrestriction(MigrationUtils.field(rs.getString("databaseaccessrestriction"), info));
|
ds.setDatabaseaccessrestriction(field(rs.getString("databaseaccessrestriction"), info));
|
||||||
ds.setDatauploadrestriction(MigrationUtils.field(rs.getString("datauploadrestriction"), info));
|
ds.setDatauploadrestriction(field(rs.getString("datauploadrestriction"), info));
|
||||||
ds.setVersioning(MigrationUtils.field(rs.getBoolean("versioning"), info));
|
ds.setVersioning(field(rs.getBoolean("versioning"), info));
|
||||||
ds.setCitationguidelineurl(MigrationUtils.field(rs.getString("citationguidelineurl"), info));
|
ds.setCitationguidelineurl(field(rs.getString("citationguidelineurl"), info));
|
||||||
ds.setQualitymanagementkind(MigrationUtils.field(rs.getString("qualitymanagementkind"), info));
|
ds.setQualitymanagementkind(field(rs.getString("qualitymanagementkind"), info));
|
||||||
ds.setPidsystems(MigrationUtils.field(rs.getString("pidsystems"), info));
|
ds.setPidsystems(field(rs.getString("pidsystems"), info));
|
||||||
ds.setCertificates(MigrationUtils.field(rs.getString("certificates"), info));
|
ds.setCertificates(field(rs.getString("certificates"), info));
|
||||||
ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array
|
ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array
|
||||||
ds.setJournal(prepareJournal(rs.getString("officialname"), rs.getString("journal"), info)); // Journal
|
ds.setJournal(prepareJournal(rs.getString("officialname"), rs.getString("journal"), info)); // Journal
|
||||||
ds.setDataInfo(info);
|
ds.setDataInfo(info);
|
||||||
|
@ -189,38 +189,38 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
|
|
||||||
final Project p = new Project();
|
final Project p = new Project();
|
||||||
|
|
||||||
p.setId(MigrationUtils.createOpenaireId("40", rs.getString("projectid")));
|
p.setId(createOpenaireId("40", rs.getString("projectid")));
|
||||||
p.setOriginalId(Arrays.asList(rs.getString("projectid")));
|
p.setOriginalId(Arrays.asList(rs.getString("projectid")));
|
||||||
p.setCollectedfrom(MigrationUtils.listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname")));
|
p.setCollectedfrom(listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname")));
|
||||||
p.setPid(null); // List<StructuredProperty> // TODO
|
p.setPid(null); // List<StructuredProperty> // TODO
|
||||||
p.setDateofcollection(rs.getDate("dateofcollection").toString());
|
p.setDateofcollection(rs.getDate("dateofcollection").toString());
|
||||||
p.setDateoftransformation(rs.getDate("dateoftransformation").toString());
|
p.setDateoftransformation(rs.getDate("dateoftransformation").toString());
|
||||||
p.setExtraInfo(null); // List<ExtraInfo> //TODO
|
p.setExtraInfo(null); // List<ExtraInfo> //TODO
|
||||||
p.setOaiprovenance(null); // Values not present in the DB
|
p.setOaiprovenance(null); // Values not present in the DB
|
||||||
p.setWebsiteurl(MigrationUtils.field(rs.getString("websiteurl"), info));
|
p.setWebsiteurl(field(rs.getString("websiteurl"), info));
|
||||||
p.setCode(MigrationUtils.field(rs.getString("code"), info));
|
p.setCode(field(rs.getString("code"), info));
|
||||||
p.setAcronym(MigrationUtils.field(rs.getString("acronym"), info));
|
p.setAcronym(field(rs.getString("acronym"), info));
|
||||||
p.setTitle(MigrationUtils.field(rs.getString("title"), info));
|
p.setTitle(field(rs.getString("title"), info));
|
||||||
p.setStartdate(MigrationUtils.field(rs.getDate("startdate").toString(), info));
|
p.setStartdate(field(rs.getDate("startdate").toString(), info));
|
||||||
p.setEnddate(MigrationUtils.field(rs.getDate("enddate").toString(), info));
|
p.setEnddate(field(rs.getDate("enddate").toString(), info));
|
||||||
p.setCallidentifier(MigrationUtils.field(rs.getString("callidentifier"), info));
|
p.setCallidentifier(field(rs.getString("callidentifier"), info));
|
||||||
p.setKeywords(MigrationUtils.field(rs.getString("keywords"), info));
|
p.setKeywords(field(rs.getString("keywords"), info));
|
||||||
p.setDuration(MigrationUtils.field(Integer.toString(rs.getInt("duration")), info));
|
p.setDuration(field(Integer.toString(rs.getInt("duration")), info));
|
||||||
p.setEcsc39(MigrationUtils.field(Boolean.toString(rs.getBoolean("ecsc39")), info));
|
p.setEcsc39(field(Boolean.toString(rs.getBoolean("ecsc39")), info));
|
||||||
p.setOamandatepublications(MigrationUtils.field(Boolean.toString(rs.getBoolean("oamandatepublications")), info));
|
p.setOamandatepublications(field(Boolean.toString(rs.getBoolean("oamandatepublications")), info));
|
||||||
p.setEcarticle29_3(MigrationUtils.field(Boolean.toString(rs.getBoolean("ecarticle29_3")), info));
|
p.setEcarticle29_3(field(Boolean.toString(rs.getBoolean("ecarticle29_3")), info));
|
||||||
p.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info));
|
p.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info));
|
||||||
p.setFundingtree(prepareListFields(rs.getArray("fundingtree"), info));
|
p.setFundingtree(prepareListFields(rs.getArray("fundingtree"), info));
|
||||||
p.setContracttype(prepareQualifierSplitting(rs.getString("contracttype")));
|
p.setContracttype(prepareQualifierSplitting(rs.getString("contracttype")));
|
||||||
p.setOptional1(MigrationUtils.field(rs.getString("optional1"), info));
|
p.setOptional1(field(rs.getString("optional1"), info));
|
||||||
p.setOptional2(MigrationUtils.field(rs.getString("optional2"), info));
|
p.setOptional2(field(rs.getString("optional2"), info));
|
||||||
p.setJsonextrainfo(MigrationUtils.field(rs.getString("jsonextrainfo"), info));
|
p.setJsonextrainfo(field(rs.getString("jsonextrainfo"), info));
|
||||||
p.setContactfullname(MigrationUtils.field(rs.getString("contactfullname"), info));
|
p.setContactfullname(field(rs.getString("contactfullname"), info));
|
||||||
p.setContactfax(MigrationUtils.field(rs.getString("contactfax"), info));
|
p.setContactfax(field(rs.getString("contactfax"), info));
|
||||||
p.setContactphone(MigrationUtils.field(rs.getString("contactphone"), info));
|
p.setContactphone(field(rs.getString("contactphone"), info));
|
||||||
p.setContactemail(MigrationUtils.field(rs.getString("contactemail"), info));
|
p.setContactemail(field(rs.getString("contactemail"), info));
|
||||||
p.setSummary(MigrationUtils.field(rs.getString("summary"), info));
|
p.setSummary(field(rs.getString("summary"), info));
|
||||||
p.setCurrency(MigrationUtils.field(rs.getString("currency"), info));
|
p.setCurrency(field(rs.getString("currency"), info));
|
||||||
p.setTotalcost(new Float(rs.getDouble("totalcost")));
|
p.setTotalcost(new Float(rs.getDouble("totalcost")));
|
||||||
p.setFundedamount(new Float(rs.getDouble("fundedamount")));
|
p.setFundedamount(new Float(rs.getDouble("fundedamount")));
|
||||||
p.setDataInfo(info);
|
p.setDataInfo(info);
|
||||||
|
@ -278,30 +278,29 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
|
|
||||||
final Organization o = new Organization();
|
final Organization o = new Organization();
|
||||||
|
|
||||||
o.setId(MigrationUtils.createOpenaireId("20", rs.getString("organizationid"))); // String id) {
|
o.setId(createOpenaireId("20", rs.getString("organizationid"))); // String id) {
|
||||||
o.setOriginalId(Arrays.asList(rs.getString("organizationid")));
|
o.setOriginalId(Arrays.asList(rs.getString("organizationid")));
|
||||||
o.setCollectedfrom(MigrationUtils.listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname")));
|
o.setCollectedfrom(listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname")));
|
||||||
o.setPid(null); // List<StructuredProperty> // TODO
|
o.setPid(null); // List<StructuredProperty> // TODO
|
||||||
o.setDateofcollection(rs.getDate("dateofcollection").toString());
|
o.setDateofcollection(rs.getDate("dateofcollection").toString());
|
||||||
o.setDateoftransformation(rs.getDate("dateoftransformation").toString());
|
o.setDateoftransformation(rs.getDate("dateoftransformation").toString());
|
||||||
o.setExtraInfo(null); // List<ExtraInfo> // TODO
|
o.setExtraInfo(null); // List<ExtraInfo> // TODO
|
||||||
o.setOaiprovenance(null); // Values not present in the DB
|
o.setOaiprovenance(null); // Values not present in the DB
|
||||||
o.setLegalshortname(MigrationUtils.field("legalshortname", info));
|
o.setLegalshortname(field("legalshortname", info));
|
||||||
o.setLegalname(MigrationUtils.field("legalname", info));
|
o.setLegalname(field("legalname", info));
|
||||||
o.setAlternativeNames(new ArrayList<>()); // Values not returned by the SQL query
|
o.setAlternativeNames(new ArrayList<>()); // Values not returned by the SQL query
|
||||||
o.setWebsiteurl(MigrationUtils.field("websiteurl", info));
|
o.setWebsiteurl(field("websiteurl", info));
|
||||||
o.setLogourl(MigrationUtils.field("logourl", info));
|
o.setLogourl(field("logourl", info));
|
||||||
o.setEclegalbody(MigrationUtils.field(Boolean.toString(rs.getBoolean("eclegalbody")), info));
|
o.setEclegalbody(field(Boolean.toString(rs.getBoolean("eclegalbody")), info));
|
||||||
o.setEclegalperson(MigrationUtils.field(Boolean.toString(rs.getBoolean("eclegalperson")), info));
|
o.setEclegalperson(field(Boolean.toString(rs.getBoolean("eclegalperson")), info));
|
||||||
o.setEcnonprofit(MigrationUtils.field(Boolean.toString(rs.getBoolean("ecnonprofit")), info));
|
o.setEcnonprofit(field(Boolean.toString(rs.getBoolean("ecnonprofit")), info));
|
||||||
o.setEcresearchorganization(MigrationUtils.field(Boolean.toString(rs.getBoolean("ecresearchorganization")), info));
|
o.setEcresearchorganization(field(Boolean.toString(rs.getBoolean("ecresearchorganization")), info));
|
||||||
o.setEchighereducation(MigrationUtils.field(Boolean.toString(rs.getBoolean("echighereducation")), info));
|
o.setEchighereducation(field(Boolean.toString(rs.getBoolean("echighereducation")), info));
|
||||||
o.setEcinternationalorganizationeurinterests(MigrationUtils
|
o.setEcinternationalorganizationeurinterests(field(Boolean.toString(rs.getBoolean("ecinternationalorganizationeurinterests")), info));
|
||||||
.field(Boolean.toString(rs.getBoolean("ecinternationalorganizationeurinterests")), info));
|
o.setEcinternationalorganization(field(Boolean.toString(rs.getBoolean("ecinternationalorganization")), info));
|
||||||
o.setEcinternationalorganization(MigrationUtils.field(Boolean.toString(rs.getBoolean("ecinternationalorganization")), info));
|
o.setEcenterprise(field(Boolean.toString(rs.getBoolean("ecenterprise")), info));
|
||||||
o.setEcenterprise(MigrationUtils.field(Boolean.toString(rs.getBoolean("ecenterprise")), info));
|
o.setEcsmevalidated(field(Boolean.toString(rs.getBoolean("ecsmevalidated")), info));
|
||||||
o.setEcsmevalidated(MigrationUtils.field(Boolean.toString(rs.getBoolean("ecsmevalidated")), info));
|
o.setEcnutscode(field(Boolean.toString(rs.getBoolean("ecnutscode")), info));
|
||||||
o.setEcnutscode(MigrationUtils.field(Boolean.toString(rs.getBoolean("ecnutscode")), info));
|
|
||||||
o.setCountry(prepareQualifierSplitting(rs.getString("country")));
|
o.setCountry(prepareQualifierSplitting(rs.getString("country")));
|
||||||
o.setDataInfo(info);
|
o.setDataInfo(info);
|
||||||
o.setLastupdatetimestamp(lastUpdateTimestamp);
|
o.setLastupdatetimestamp(lastUpdateTimestamp);
|
||||||
|
@ -343,9 +342,9 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
|
|
||||||
try {
|
try {
|
||||||
final DataInfo info = prepareDataInfo(rs);
|
final DataInfo info = prepareDataInfo(rs);
|
||||||
final String orgId = MigrationUtils.createOpenaireId("20", rs.getString("organization"));
|
final String orgId = createOpenaireId("20", rs.getString("organization"));
|
||||||
final String dsId = MigrationUtils.createOpenaireId("10", rs.getString("datasource"));
|
final String dsId = createOpenaireId("10", rs.getString("datasource"));
|
||||||
final List<KeyValue> collectedFrom = MigrationUtils.listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname"));
|
final List<KeyValue> collectedFrom = listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname"));
|
||||||
|
|
||||||
final Relation r1 = new Relation();
|
final Relation r1 = new Relation();
|
||||||
r1.setRelType("datasourceOrganization");
|
r1.setRelType("datasourceOrganization");
|
||||||
|
@ -391,9 +390,9 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
public void processProjectOrganization(final ResultSet rs) {
|
public void processProjectOrganization(final ResultSet rs) {
|
||||||
try {
|
try {
|
||||||
final DataInfo info = prepareDataInfo(rs);
|
final DataInfo info = prepareDataInfo(rs);
|
||||||
final String orgId = MigrationUtils.createOpenaireId("20", rs.getString("resporganization"));
|
final String orgId = createOpenaireId("20", rs.getString("resporganization"));
|
||||||
final String projectId = MigrationUtils.createOpenaireId("40", rs.getString("project"));
|
final String projectId = createOpenaireId("40", rs.getString("project"));
|
||||||
final List<KeyValue> collectedFrom = MigrationUtils.listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname"));
|
final List<KeyValue> collectedFrom = listKeyValues(rs.getString("collectedfromid"), rs.getString("collectedfromname"));
|
||||||
|
|
||||||
final Relation r1 = new Relation();
|
final Relation r1 = new Relation();
|
||||||
r1.setRelType("projectOrganization");
|
r1.setRelType("projectOrganization");
|
||||||
|
@ -443,18 +442,18 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
final String inferenceprovenance = rs.getString("inferenceprovenance");
|
final String inferenceprovenance = rs.getString("inferenceprovenance");
|
||||||
final Boolean inferred = rs.getBoolean("inferred");
|
final Boolean inferred = rs.getBoolean("inferred");
|
||||||
final String trust = rs.getString("trust");
|
final String trust = rs.getString("trust");
|
||||||
return MigrationUtils.dataInfo(deletedbyinference, inferenceprovenance, inferred, false, ENTITYREGISTRY_PROVENANCE_ACTION, trust);
|
return dataInfo(deletedbyinference, inferenceprovenance, inferred, false, ENTITYREGISTRY_PROVENANCE_ACTION, trust);
|
||||||
}
|
}
|
||||||
|
|
||||||
private Qualifier prepareQualifierSplitting(final String s) {
|
private Qualifier prepareQualifierSplitting(final String s) {
|
||||||
if (StringUtils.isBlank(s)) { return null; }
|
if (StringUtils.isBlank(s)) { return null; }
|
||||||
final String[] arr = s.split("@@@");
|
final String[] arr = s.split("@@@");
|
||||||
return arr.length == 4 ? MigrationUtils.qualifier(arr[0], arr[1], arr[2], arr[3]) : null;
|
return arr.length == 4 ? qualifier(arr[0], arr[1], arr[2], arr[3]) : null;
|
||||||
}
|
}
|
||||||
|
|
||||||
public static List<Field<String>> prepareListFields(final Array array, final DataInfo info) {
|
private static List<Field<String>> prepareListFields(final Array array, final DataInfo info) {
|
||||||
try {
|
try {
|
||||||
return MigrationUtils.listFields(info, (String[]) array.getArray());
|
return listFields(info, (String[]) array.getArray());
|
||||||
} catch (final SQLException e) {
|
} catch (final SQLException e) {
|
||||||
throw new RuntimeException("Invalid SQL array", e);
|
throw new RuntimeException("Invalid SQL array", e);
|
||||||
}
|
}
|
||||||
|
@ -466,7 +465,7 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
if (parts.length == 2) {
|
if (parts.length == 2) {
|
||||||
final String value = parts[0];
|
final String value = parts[0];
|
||||||
final String[] arr = parts[1].split("@@@");
|
final String[] arr = parts[1].split("@@@");
|
||||||
if (arr.length == 4) { return MigrationUtils.structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo); }
|
if (arr.length == 4) { return structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo); }
|
||||||
}
|
}
|
||||||
return null;
|
return null;
|
||||||
}
|
}
|
||||||
|
@ -492,8 +491,8 @@ public class MigrateDbEntitiesApplication extends AbstractMigrateApplication imp
|
||||||
final String issn = StringUtils.isNotBlank(arr[0]) ? arr[0] : null;
|
final String issn = StringUtils.isNotBlank(arr[0]) ? arr[0] : null;
|
||||||
final String eissn = StringUtils.isNotBlank(arr[1]) ? arr[1] : null;;
|
final String eissn = StringUtils.isNotBlank(arr[1]) ? arr[1] : null;;
|
||||||
final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2] : null;;
|
final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2] : null;;
|
||||||
if (issn != null || eissn != null || lissn != null) { return MigrationUtils
|
if (issn != null || eissn != null
|
||||||
.journal(name, issn, eissn, eissn, null, null, null, null, null, null, null, info); }
|
|| lissn != null) { return journal(name, issn, eissn, eissn, null, null, null, null, null, null, null, info); }
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
return null;
|
return null;
|
||||||
|
|
Loading…
Reference in New Issue