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Refactoring Solr Configuration #148

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claudio.atzori merged 4 commits from beta_solr_config into beta 2021-10-14 12:45:11 +02:00
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126
dhp-workflows/dhp-graph-provision/src/test/java/eu/dnetlib/dhp/oa/provision/SolrConfigExploreTest.java Normal file
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package eu.dnetlib.dhp.oa.provision;
import java.io.IOException;
import java.net.URI;
import org.apache.commons.io.IOUtils;
import org.apache.solr.client.solrj.SolrQuery;
import org.apache.solr.client.solrj.response.QueryResponse;
import org.apache.solr.common.SolrDocument;
import org.apache.solr.common.params.CommonParams;
import org.apache.spark.SparkConf;
import org.apache.spark.sql.SparkSession;
import org.junit.jupiter.api.*;
import org.junit.jupiter.api.extension.ExtendWith;
import org.mockito.Mock;
import org.mockito.Mockito;
import org.mockito.junit.jupiter.MockitoExtension;
import eu.dnetlib.dhp.oa.provision.model.SerializableSolrInputDocument;
import eu.dnetlib.dhp.oa.provision.utils.ISLookupClient;
import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException;
import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService;
@ExtendWith(MockitoExtension.class)
public class SolrConfigExploreTest extends SolrExploreTest {
protected static SparkSession spark;
private static final Integer batchSize = 100;
@Mock
private ISLookUpService isLookUpService;
@Mock
private ISLookupClient isLookupClient;
@BeforeEach
public void prepareMocks() throws ISLookUpException, IOException {
isLookupClient.setIsLookup(isLookUpService);
int solrPort = URI.create("http://" + miniCluster.getZkClient().getZkServerAddress()).getPort();
Mockito
.when(isLookupClient.getDsId(Mockito.anyString()))
.thenReturn("313f0381-23b6-466f-a0b8-c72a9679ac4b_SW5kZXhEU1Jlc291cmNlcy9JbmRleERTUmVzb3VyY2VUeXBl");
Mockito.when(isLookupClient.getZkHost()).thenReturn(String.format("127.0.0.1:%s/solr", solrPort));
Mockito
.when(isLookupClient.getLayoutSource(Mockito.anyString()))
.thenReturn(IOUtils.toString(getClass().getResourceAsStream("fields.xml")));
Mockito
.when(isLookupClient.getLayoutTransformer())
.thenReturn(IOUtils.toString(getClass().getResourceAsStream("layoutToRecordTransformer.xsl")));
}
@BeforeAll
public static void before() {
SparkConf conf = new SparkConf();
conf.setAppName(XmlIndexingJobTest.class.getSimpleName());
conf.registerKryoClasses(new Class[] {
SerializableSolrInputDocument.class
});
conf.setMaster("local[1]");
conf.set("spark.driver.host", "localhost");
conf.set("hive.metastore.local", "true");
conf.set("spark.ui.enabled", "false");
conf.set("spark.sql.warehouse.dir", workingDir.resolve("spark").toString());
spark = SparkSession
.builder()
.appName(XmlIndexingJobTest.class.getSimpleName())
.config(conf)
.getOrCreate();
}
@AfterAll
public static void tearDown() {
spark.stop();
}
@Test
public void testSolrConfig() throws Exception {
String inputPath = "src/test/resources/eu/dnetlib/dhp/oa/provision/xml";
new XmlIndexingJob(spark, inputPath, FORMAT, batchSize, XmlIndexingJob.OutputFormat.SOLR, null).run(isLookupClient);
Assertions.assertEquals(0, miniCluster.getSolrClient().commit().getStatus());
String[] queryStrings = {
"cancer",
"graph",
"graphs"
};
for (String q : queryStrings) {
SolrQuery query = new SolrQuery();
query.setRequestHandler("/exploreSearch");
query.add(CommonParams.Q, q);
query.set("debugQuery", "on");
log.info("Submit query to Solr with params: {}", query.toString());
QueryResponse rsp = miniCluster.getSolrClient().query(query);
// System.out.println(rsp.getHighlighting());
// System.out.println(rsp.getExplainMap());
for (SolrDocument doc : rsp.getResults()) {
System.out.println(
doc.get("score") + "\t" +
doc.get("__indexrecordidentifier") + "\t" +
doc.get("resultidentifier") + "\t" +
doc.get("resultauthor") + "\t" +
doc.get("resultacceptanceyear") + "\t" +
doc.get("resultsubject") + "\t" +
doc.get("resulttitle") + "\t" +
doc.get("relprojectname") + "\t" +
doc.get("resultdescription") + "\t" +
doc.get("__all") + "\t"
);
}
}
}
}

131
dhp-workflows/dhp-graph-provision/src/test/java/eu/dnetlib/dhp/oa/provision/SolrConfigTest.java Normal file
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package eu.dnetlib.dhp.oa.provision;
import java.io.IOException;
import java.io.StringReader;
import java.net.URI;
import org.apache.commons.io.IOUtils;
import org.apache.hadoop.io.Text;
import org.apache.solr.client.solrj.SolrQuery;
import org.apache.solr.client.solrj.response.QueryResponse;
import org.apache.solr.common.SolrDocument;
import org.apache.solr.common.SolrInputField;
import org.apache.solr.common.params.CommonParams;
import org.apache.spark.SparkConf;
import org.apache.spark.api.java.JavaPairRDD;
import org.apache.spark.api.java.JavaSparkContext;
import org.apache.spark.api.java.function.MapFunction;
import org.apache.spark.sql.Dataset;
import org.apache.spark.sql.Encoders;
import org.apache.spark.sql.SparkSession;
import org.dom4j.io.SAXReader;
import org.junit.jupiter.api.*;
import org.junit.jupiter.api.extension.ExtendWith;
import org.mockito.Mock;
import org.mockito.Mockito;
import org.mockito.junit.jupiter.MockitoExtension;
import eu.dnetlib.dhp.oa.provision.model.SerializableSolrInputDocument;
import eu.dnetlib.dhp.oa.provision.utils.ISLookupClient;
import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException;
import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService;
@ExtendWith(MockitoExtension.class)
public class SolrConfigTest extends SolrTest {
protected static SparkSession spark;
private static final Integer batchSize = 100;
@Mock
private ISLookUpService isLookUpService;
@Mock
private ISLookupClient isLookupClient;
@BeforeEach
public void prepareMocks() throws ISLookUpException, IOException {
isLookupClient.setIsLookup(isLookUpService);
int solrPort = URI.create("http://" + miniCluster.getZkClient().getZkServerAddress()).getPort();
Mockito
.when(isLookupClient.getDsId(Mockito.anyString()))
.thenReturn("313f0381-23b6-466f-a0b8-c72a9679ac4b_SW5kZXhEU1Jlc291cmNlcy9JbmRleERTUmVzb3VyY2VUeXBl");
Mockito.when(isLookupClient.getZkHost()).thenReturn(String.format("127.0.0.1:%s/solr", solrPort));
Mockito
.when(isLookupClient.getLayoutSource(Mockito.anyString()))
.thenReturn(IOUtils.toString(getClass().getResourceAsStream("fields.xml")));
Mockito
.when(isLookupClient.getLayoutTransformer())
.thenReturn(IOUtils.toString(getClass().getResourceAsStream("layoutToRecordTransformer.xsl")));
}
@BeforeAll
public static void before() {
SparkConf conf = new SparkConf();
conf.setAppName(XmlIndexingJobTest.class.getSimpleName());
conf.registerKryoClasses(new Class[] {
SerializableSolrInputDocument.class
});
conf.setMaster("local[1]");
conf.set("spark.driver.host", "localhost");
conf.set("hive.metastore.local", "true");
conf.set("spark.ui.enabled", "false");
conf.set("spark.sql.warehouse.dir", workingDir.resolve("spark").toString());
spark = SparkSession
.builder()
.appName(XmlIndexingJobTest.class.getSimpleName())
.config(conf)
.getOrCreate();
}
@AfterAll
public static void tearDown() {
spark.stop();
}
@Test
public void testSolrConfig() throws Exception {
String inputPath = "src/test/resources/eu/dnetlib/dhp/oa/provision/xml";
new XmlIndexingJob(spark, inputPath, FORMAT, batchSize, XmlIndexingJob.OutputFormat.SOLR, null).run(isLookupClient);
Assertions.assertEquals(0, miniCluster.getSolrClient().commit().getStatus());
String[] queryStrings = {
"cancer",
"graph",
"graphs"
};
for (String q : queryStrings) {
SolrQuery query = new SolrQuery();
query.add(CommonParams.Q, q);
log.info("Submit query to Solr with params: {}", query.toString());
QueryResponse rsp = miniCluster.getSolrClient().query(query);
for (SolrDocument doc : rsp.getResults()) {
System.out.println(
doc.get("score") + "\t" +
doc.get("__indexrecordidentifier") + "\t" +
doc.get("resultidentifier") + "\t" +
doc.get("resultauthor") + "\t" +
doc.get("resultacceptanceyear") + "\t" +
doc.get("resultsubject") + "\t" +
doc.get("resulttitle") + "\t" +
doc.get("relprojectname") + "\t" +
doc.get("resultdescription") + "\t" +
doc.get("__all") + "\t"
);
}
}
}
}

109
dhp-workflows/dhp-graph-provision/src/test/java/eu/dnetlib/dhp/oa/provision/SolrExploreTest.java Normal file
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package eu.dnetlib.dhp.oa.provision;
import java.io.File;
import java.nio.file.Path;
import org.apache.commons.io.FileUtils;
import org.apache.solr.client.solrj.embedded.JettyConfig;
import org.apache.solr.client.solrj.impl.CloudSolrClient;
import org.apache.solr.client.solrj.request.CollectionAdminRequest;
import org.apache.solr.client.solrj.request.ConfigSetAdminRequest;
import org.apache.solr.client.solrj.request.QueryRequest;
import org.apache.solr.cloud.MiniSolrCloudCluster;
import org.apache.solr.common.params.CollectionParams;
import org.apache.solr.common.params.CoreAdminParams;
import org.apache.solr.common.params.ModifiableSolrParams;
import org.apache.solr.common.util.NamedList;
import org.junit.jupiter.api.AfterAll;
import org.junit.jupiter.api.BeforeAll;
import org.junit.jupiter.api.io.TempDir;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
public abstract class SolrExploreTest {
protected static final Logger log = LoggerFactory.getLogger(SolrTest.class);
protected static final String FORMAT = "test";
protected static final String DEFAULT_COLLECTION = FORMAT + "-index-openaire";
protected static final String CONFIG_NAME = "testConfig";
protected static MiniSolrCloudCluster miniCluster;
@TempDir
public static Path workingDir;
@BeforeAll
public static void setup() throws Exception {
// random unassigned HTTP port
final int jettyPort = 0;
final JettyConfig jettyConfig = JettyConfig.builder().setPort(jettyPort).build();
log.info(String.format("working directory: %s", workingDir.toString()));
System.setProperty("solr.log.dir", workingDir.resolve("logs").toString());
// create a MiniSolrCloudCluster instance
miniCluster = new MiniSolrCloudCluster(2, workingDir.resolve("solr"), jettyConfig);
// Upload Solr configuration directory to ZooKeeper
String solrZKConfigDir = "src/test/resources/eu/dnetlib/dhp/oa/provision/solr/conf/exploreTestConfig";
File configDir = new File(solrZKConfigDir);
miniCluster.uploadConfigSet(configDir.toPath(), CONFIG_NAME);
// override settings in the solrconfig include
System.setProperty("solr.tests.maxBufferedDocs", "100000");
System.setProperty("solr.tests.maxIndexingThreads", "-1");
System.setProperty("solr.tests.ramBufferSizeMB", "100");
// use non-test classes so RandomizedRunner isn't necessary
System.setProperty("solr.tests.mergeScheduler", "org.apache.lucene.index.ConcurrentMergeScheduler");
System.setProperty("solr.directoryFactory", "solr.RAMDirectoryFactory");
System.setProperty("solr.lock.type", "single");
log.info(new ConfigSetAdminRequest.List().process(miniCluster.getSolrClient()).toString());
log
.info(
CollectionAdminRequest.ClusterStatus
.getClusterStatus()
.process(miniCluster.getSolrClient())
.toString());
NamedList<Object> res = createCollection(
miniCluster.getSolrClient(), DEFAULT_COLLECTION, 4, 2, 20, CONFIG_NAME);
res.forEach(o -> log.info(o.toString()));
miniCluster.getSolrClient().setDefaultCollection(DEFAULT_COLLECTION);
log
.info(
CollectionAdminRequest.ClusterStatus
.getClusterStatus()
.process(miniCluster.getSolrClient())
.toString());
}
@AfterAll
public static void shutDown() throws Exception {
miniCluster.shutdown();
FileUtils.deleteDirectory(workingDir.toFile());
}
protected static NamedList<Object> createCollection(CloudSolrClient client, String name, int numShards,
int replicationFactor, int maxShardsPerNode, String configName) throws Exception {
ModifiableSolrParams modParams = new ModifiableSolrParams();
modParams.set(CoreAdminParams.ACTION, CollectionParams.CollectionAction.CREATE.name());
modParams.set("name", name);
modParams.set("numShards", numShards);
modParams.set("replicationFactor", replicationFactor);
modParams.set("collection.configName", configName);
modParams.set("maxShardsPerNode", maxShardsPerNode);
QueryRequest request = new QueryRequest(modParams);
request.setPath("/admin/collections");
return client.request(request);
}
}