Claudio Atzori
ce3200263e
Merge branch 'beta' into crossref_missing_author_fix
2024-01-26 15:57:04 +01:00
e889808daa
Fixed problem on missing author in crossref Mapping
2024-01-26 12:19:04 +01:00
Antonis Lempesis
a7115cfa9e
max mem of joins (hive.mapjoin.followby.gby.localtask.max.memory.usage) now 80%, up from 55%.
2024-01-25 15:13:16 +01:00
Claudio Atzori
9b13c22e5d
[graph provision] retrieve all the context information by adding all=true to the requests issued to thr API
2024-01-23 15:36:08 +01:00
Claudio Atzori
f87f3a6483
[graph provision] updated param specification for the XML converter job
2024-01-23 08:54:37 +01:00
Claudio Atzori
6fd25cf549
code formatting
2024-01-23 08:47:12 +01:00
Claudio Atzori
f76852f385
Merge branch 'beta' into update_pivots_table
2024-01-22 16:37:22 +01:00
Claudio Atzori
1c6db320f4
[graph provision] obtain context info from the context API instead from the ISLookUp service
2024-01-22 15:53:17 +01:00
Claudio Atzori
2655eea5bc
[orcid enrichment] drop paths before copying the non-modifyed contents
2024-01-19 16:28:05 +01:00
Claudio Atzori
c6b3401596
increased shuffle partitions for publications in the country propagation workflow
2024-01-19 10:15:39 +01:00
Miriam Baglioni
bcc0a13981
[enrichment single step] adding <end> element in wf definition
2024-01-18 17:39:14 +01:00
Miriam Baglioni
6af536541d
[enrichment single step] moving parameter file in correct location
2024-01-18 15:35:40 +01:00
Miriam Baglioni
a12a3eb143
-
2024-01-18 15:18:10 +01:00
Miriam Baglioni
82e9e262ee
[enrichment single step] remove parameter from execution
2024-01-17 17:38:03 +01:00
Miriam Baglioni
67ce2d54be
[enrichment single step] refactoring to fix issues in disappeared result type
2024-01-17 16:50:00 +01:00
Miriam Baglioni
59eaccbd87
[enrichment single step] refactoring to fix issue in disappeared result type
2024-01-15 17:49:54 +01:00
Giambattista Bloisi
21a14fcd80
Reusable RunSQLSparkJob for executing SQL in Spark through Oozie Spark Actions
...
Implements pivots table update oozie workflow
2024-01-15 10:18:14 +01:00
Miriam Baglioni
f612125939
fix issue on FoS integration. Removing the null values from FoS
2024-01-12 10:20:28 +01:00
Claudio Atzori
cb9e739484
Merge branch 'beta' into resource_types
2024-01-11 16:29:41 +01:00
Claudio Atzori
2753044d13
refined mapping for the extraction of the original resource type
2024-01-11 16:28:26 +01:00
Giambattista Bloisi
3c66e3bd7b
Create dedup record for "merged" pivots
...
Do not create dedup records for group that have more than 20 different acceptance date
2024-01-10 22:59:52 +01:00
Giambattista Bloisi
10e135db1e
Use dedup_wf_002 in place of dedup_wf_001 to make explicit a different algorithm has been used to generate those kind of ids
2024-01-10 22:59:52 +01:00
Giambattista Bloisi
831cc1fdde
Generate "merged" dedup id relations also for records that are filtered out by the cut parameters
2024-01-10 22:59:52 +01:00
Giambattista Bloisi
1287315ffb
Do no longer use dedupId information from pivotHistory Database
2024-01-10 22:59:52 +01:00
Giambattista Bloisi
02636e802c
SparkCreateSimRels:
...
- Create dedup blocks from the complete queue of records matching cluster key instead of truncating the results
- Clean titles once before clustering and similarity comparisons
- Added support for filtered fields in model
- Added support for sorting List fields in model
- Added new JSONListClustering and numAuthorsTitleSuffixPrefixChain clustering functions
- Added new maxLengthMatch comparator function
- Use reduced complexity Levenshtein with threshold in levensteinTitle
- Use reduced complexity AuthorsMatch with threshold early-quit
- Use incremental Connected Component to decrease comparisons in similarity match in BlockProcessor
- Use new clusterings configuration in Dedup tests
SparkWhitelistSimRels: use left semi join for clarity and performance
SparkCreateMergeRels:
- Use new connected component algorithm that converge faster than Spark GraphX provided algorithm
- Refactored to use Windowing sorting rather than groupBy to reduce memory pressure
- Use historical pivot table to generate singleton rels, merged rels and keep continuity with dedupIds used in the past
- Comparator for pivot record selection now uses "tomorrow" as filler for missing or incorrect date instead of "2000-01-01"
- Changed generation of ids of type dedup_wf_001 to avoid collisions
DedupRecordFactory: use reduceGroups instead of mapGroups to decrease memory pressure
2024-01-10 22:59:52 +01:00
Miriam Baglioni
e711a05229
fixed conflicts
2024-01-10 11:03:42 +01:00
Miriam Baglioni
71d6f30711
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2024-01-10 10:59:58 +01:00
Miriam Baglioni
cb14470ba6
added properties file in the forlder for the workflow of result to organization from inst repo propagation. Changes the path in the classes implementing the propagation
2023-12-22 14:50:05 +01:00
Miriam Baglioni
9f966b59d4
added properties file in the forlder for the workflow of result to community from semrel propagation. Changes the path in the classes implementing the propagation
2023-12-22 14:11:47 +01:00
Miriam Baglioni
2f3b5a133d
added properties file in the forlder for the workflow of result to community from organization propagation. Changes the path in the classes implementing the propagation
2023-12-22 13:56:40 +01:00
Miriam Baglioni
2f7b9ad815
added properties file in the forlder for the workflow of project to result propagation. Changes the path in the classes implementing the propagation
2023-12-22 11:46:15 +01:00
Miriam Baglioni
f2352e8a78
changed in the classes the path for the property files for the propagation of community from project
2023-12-22 11:43:34 +01:00
Miriam Baglioni
009730b3d1
added properties file in the forlder for the workflow of orcid propagation. Changes the path in the classes implementing the propagationchanged the path to the parameter file in the class for entitytoorganization propagation
2023-12-22 11:42:09 +01:00
Miriam Baglioni
89f269c7f4
changed the path to the parameter file in the class for entitytoorganization propagation
2023-12-22 11:37:50 +01:00
Miriam Baglioni
b06aea0adf
adding the bulkTag parameter file in the folder for the oozie workflow for bulkTagging. Changes the path in the class
2023-12-22 11:35:37 +01:00
Miriam Baglioni
3afd4aa57b
adjustments for country propagation
2023-12-22 11:27:30 +01:00
Claudio Atzori
62104790ae
added metaresourcetype to the result hive DB view
2023-12-21 12:27:10 +01:00
Miriam Baglioni
5011c4d11a
refactoring after compiletion
2023-12-20 15:57:26 +01:00
Miriam Baglioni
4740c808f7
-
2023-12-20 14:26:54 +01:00
Miriam Baglioni
d410ea8a41
added needed parameter
2023-12-19 12:15:01 +01:00
15fd93a2b6
uploaded input parameters on CreateBaseline WF
2023-12-18 12:21:55 +01:00
9d342a47da
updated the transformation Baseline workflow to include mdstore rollback/commit action
2023-12-18 11:48:57 +01:00
Miriam Baglioni
3eca5d2e1c
-
2023-12-18 09:55:27 +01:00
Miriam Baglioni
01ce0b9c76
[doiboost - preprocess] remove transition to orcid preparation from sequence of steps at the beginning of the workflow
2023-12-15 12:24:55 +01:00
Miriam Baglioni
0d8e496a63
-
2023-12-15 12:16:43 +01:00
Claudio Atzori
ff924215b8
[graph provision] added tests for new peerreviewed field
2023-12-12 11:21:30 +01:00
Claudio Atzori
7e8eff40c1
[graph provision] added tests for the new model fields
2023-12-12 08:54:15 +01:00
Miriam Baglioni
8752d275fa
removed not needed parameter
2023-12-09 15:24:45 +01:00
Miriam Baglioni
d4eedada71
adjusting workflow definition
2023-12-09 15:20:11 +01:00
Claudio Atzori
cb71a7936b
[graph cleaning] avoid stack overflow error when navigating Oaf objects declaring an Enum
2023-12-07 23:09:54 +01:00
Claudio Atzori
Sandro La Bruzzo
Antonis Lempesis
Miriam Baglioni
Giambattista Bloisi
Giambattista Bloisi