Commit Graph

675 Commits

Author SHA1 Message Date
Sandro La Bruzzo 93fe8ce8b2 entity resolution: fix test 2021-11-22 15:50:43 +01:00
Sandro La Bruzzo 35e20b0647 updated resolution wf:
- generate a new version of the graph
 - changed merge from union to join
2021-11-22 11:48:55 +01:00
Claudio Atzori bb5dca7979 cleanup 2021-11-18 17:10:46 +01:00
Miriam Baglioni 793b5a8e5f Aggiornare 'dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/dump/ResultMapper.java'
Removing the dump of Measure at the level of the result. We decided not to map it
2021-11-18 14:49:38 +01:00
Claudio Atzori 668ac25224 [graph resolution] using existing argument parser file name 2021-11-15 17:02:45 +01:00
Sandro La Bruzzo a7763d2492 removed alternate identifier in resolutionMap 2021-11-12 09:56:45 +01:00
Sandro La Bruzzo 2ca0a436ad added SparkResolveEntities node to the oozie wf 2021-11-11 10:25:42 +01:00
Sandro La Bruzzo 9cb195314f implemented and tested resolution of entities 2021-11-11 10:17:40 +01:00
Sandro La Bruzzo 6477a40670 implement filter of openCitation 2021-11-09 11:27:12 +01:00
Sandro La Bruzzo 7bd224f051 implement first version of scholexplorer integration for the generation of final graph 2021-11-02 15:58:15 +01:00
Sandro La Bruzzo d9cbca83f7 moved filter on next phase 2021-10-28 16:13:24 +02:00
Sandro La Bruzzo 1be9aa0a5f Removed filter of datacite items from the raw graph merging phase, Datacite is not an actionset anymore in beta 2021-10-26 17:52:20 +02:00
Sandro La Bruzzo 4acfa8fa2e Scholexplorer Datasource Aggregation:
- Added collectedfrom in the inverse relation generated
Relation resolution:
- increased number of partitions in workflow.xml
- using classid instead of classname to build the pid-dnetId mapping
2021-10-26 17:51:20 +02:00
Sandro La Bruzzo 034304b33a conflict resolved on merge 2021-10-26 09:40:47 +02:00
Claudio Atzori d147295c2f avoiding java.io.NotSerializableException: java.util.HashMap 2021-10-21 14:15:57 +02:00
Claudio Atzori 3702fe478d cleanup 2021-10-21 12:05:02 +02:00
Sandro La Bruzzo ac36aa7d1c fixed wrong Encoding during a map phase 2021-10-21 11:35:02 +02:00
Sandro La Bruzzo ae4e99a471 Adapted workflow of resolution of PID to work into OpenAIRE data workflow
- Added relations in both verse on all Scholexplorer datasources
2021-10-20 17:12:16 +02:00
Claudio Atzori 00b78b9c58 cleanup: mapping contents in the graph already defined in the OAF graph model doesn't require to be aware of the vocabularies 2021-10-20 14:04:45 +02:00
Claudio Atzori c01dd0c925 registered oaf model classes for the KryoSerializer 2021-10-20 13:55:07 +02:00
Claudio Atzori 515e068a78 Merge branch 'beta' into hierarchical_orgs_relations 2021-10-19 16:46:06 +02:00
Claudio Atzori 512e7b0170 code formatting 2021-10-19 16:19:29 +02:00
Claudio Atzori e9157c67aa Merge branch 'beta' into dump 2021-10-19 16:15:03 +02:00
Claudio Atzori 98f37c8d81 WIP: worflow nodes for including Scholexplorer records in the RAW graph 2021-10-19 16:14:40 +02:00
Claudio Atzori 7a73010acd WIP: worflow nodes for including Scholexplorer records in the RAW graph 2021-10-19 11:59:16 +02:00
Miriam Baglioni c7f6cd2591 added again the setting for saXReader 2021-10-19 10:15:26 +02:00
miconis 5f780a6ba1 bug fix in migrate entities: parameter name was wrong 2021-10-18 23:30:40 +02:00
miconis 995c1eddaf minor change 2021-10-13 17:07:10 +02:00
miconis 326bf63775 integration of parent child orgs relations 2021-10-13 12:24:48 +02:00
Miriam Baglioni 63933808d4 added fix for mixing result types, added configuration default to funder subworkflow 2021-10-13 11:28:28 +02:00
Miriam Baglioni fec40bdd95 merging with branch beta - resolved conflicts 2021-10-12 09:16:36 +02:00
Sandro La Bruzzo 5606014b17 code refactor see ticket #7065 2021-10-12 08:11:53 +02:00
Sandro La Bruzzo 2557bb41f5 Implemented new method for update baseline inside scala node 2021-10-06 16:41:08 +02:00
Sandro La Bruzzo b84e0cabeb Implemented new method for update baseline 2021-10-05 16:34:47 +02:00
Sandro La Bruzzo 991b06bd0b removed generation of EBI links from old dump, now EBI link dump is created by another wf 2021-10-05 10:21:33 +02:00
Miriam Baglioni e653756e3d applied some suggestiond from Sonar Lint 2021-10-04 18:40:07 +02:00
Miriam Baglioni c4ccd7b32c - 2021-10-01 12:59:47 +02:00
Miriam Baglioni c8321ad31a merge with branch beta 2021-10-01 12:59:08 +02:00
Claudio Atzori ebf53a1616 added cleaning for relation fields: subRelType & relClass according to dedicated vocabs 2021-09-15 16:10:37 +02:00
Sandro La Bruzzo e8b3cb9147 Implemented method to download delta updates in EBI Links 2021-08-30 09:32:45 +02:00
Alessia Bardi ccf4103a25 keep the original url if the decoder fails for any reason 2021-08-25 10:07:58 +02:00
Sandro La Bruzzo 45898c71ac fixed wrong doi in pubmed 2021-08-24 15:20:04 +02:00
Alessia Bardi 931f430129 Merge branch 'beta' into datasource_model_eosc_beta 2021-08-23 11:57:21 +02:00
Alessia Bardi 4c1474e693 Dealing with #6859#note-2: we have to decode URLs to avoid & and other chars encoded becasue of the original XML representation of data 2021-08-20 17:03:30 +02:00
Miriam Baglioni e5cf11d088 change open access route to result matching hbm to gold 2021-08-19 10:29:04 +02:00
Claudio Atzori f74adc4752 added DownloadCSV2 as alternative implementation of the same download procedure 2021-08-13 15:52:15 +02:00
Claudio Atzori 5f0903d50d fixed CSV downloader & tests 2021-08-13 14:17:54 +02:00
Claudio Atzori 7ee2757fcd fixed DownloadCSV parameters spec; workflow patching the hostedby replaces the graph content (publication, datasource) rather than creating a copy 2021-08-13 12:41:01 +02:00
Claudio Atzori c3ad4ab701 minor fixes 2021-08-13 12:23:15 +02:00
Claudio Atzori 3359f73fcf cleanup & best practices 2021-08-13 12:00:42 +02:00