Claudio Atzori
cb9e739484
Merge branch 'beta' into resource_types
2024-01-11 16:29:41 +01:00
Claudio Atzori
2753044d13
refined mapping for the extraction of the original resource type
2024-01-11 16:28:26 +01:00
Giambattista Bloisi
a88dce5bf3
Merge pull request 'Improvements and refactoring in Dedup' ( #367 ) from dedup_increasenumofblocks into beta
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Reviewed-on: #367
2024-01-11 11:24:06 +01:00
Giambattista Bloisi
3c66e3bd7b
Create dedup record for "merged" pivots
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Do not create dedup records for group that have more than 20 different acceptance date
2024-01-10 22:59:52 +01:00
Giambattista Bloisi
10e135db1e
Use dedup_wf_002 in place of dedup_wf_001 to make explicit a different algorithm has been used to generate those kind of ids
2024-01-10 22:59:52 +01:00
Giambattista Bloisi
831cc1fdde
Generate "merged" dedup id relations also for records that are filtered out by the cut parameters
2024-01-10 22:59:52 +01:00
Giambattista Bloisi
1287315ffb
Do no longer use dedupId information from pivotHistory Database
2024-01-10 22:59:52 +01:00
Giambattista Bloisi
02636e802c
SparkCreateSimRels:
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- Create dedup blocks from the complete queue of records matching cluster key instead of truncating the results
- Clean titles once before clustering and similarity comparisons
- Added support for filtered fields in model
- Added support for sorting List fields in model
- Added new JSONListClustering and numAuthorsTitleSuffixPrefixChain clustering functions
- Added new maxLengthMatch comparator function
- Use reduced complexity Levenshtein with threshold in levensteinTitle
- Use reduced complexity AuthorsMatch with threshold early-quit
- Use incremental Connected Component to decrease comparisons in similarity match in BlockProcessor
- Use new clusterings configuration in Dedup tests
SparkWhitelistSimRels: use left semi join for clarity and performance
SparkCreateMergeRels:
- Use new connected component algorithm that converge faster than Spark GraphX provided algorithm
- Refactored to use Windowing sorting rather than groupBy to reduce memory pressure
- Use historical pivot table to generate singleton rels, merged rels and keep continuity with dedupIds used in the past
- Comparator for pivot record selection now uses "tomorrow" as filler for missing or incorrect date instead of "2000-01-01"
- Changed generation of ids of type dedup_wf_001 to avoid collisions
DedupRecordFactory: use reduceGroups instead of mapGroups to decrease memory pressure
2024-01-10 22:59:52 +01:00
Antonis Lempesis
e024718f73
creating result_instances even when no pids exist for the instance
2024-01-10 22:25:50 +01:00
Claudio Atzori
16d858fbf0
Merge pull request 'enrichmentSingleStep' ( #373 ) from enrichmentSingleStep into beta
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Reviewed-on: #373
2024-01-10 16:58:49 +01:00
Miriam Baglioni
e711a05229
fixed conflicts
2024-01-10 11:03:42 +01:00
Miriam Baglioni
71d6f30711
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2024-01-10 10:59:58 +01:00
dimitrispie
b920307bdd
Changes to indicators
2024-01-09 00:47:09 +02:00
dimitrispie
8b2cbb611e
Changes to beta db names
2024-01-09 00:40:56 +02:00
Antonis Lempesis
2e4cab026c
fixed the result_country definition
2024-01-08 16:01:26 +02:00
dimitrispie
6b823100ae
Update buildIrishMonitorDB.sql
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New indicators added
2024-01-07 22:54:39 +02:00
dimitrispie
75bfde043c
Historical Snapshots Workflow
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Create historical snapshots db with parameters:
hist_db_name=openaire_beta_historical_snapshots_xxx
hist_db_name_prev=openaire_beta_historical_snapshots_xxx (previous run of wf)
stats_db_name=openaire_beta_stats_xxx
stats_irish_db_name=openaire_beta_stats_monitor_ie_xxx
monitor_db_name=openaire_beta_stats_monitor_xxx
monitor_db_prod_name=openaire_beta_stats_monitor
monitor_irish_db_name=openaire_beta_stats_monitor_ie_xxx
monitor_irish_db_prod_name=openaire_beta_stats_monitor_ie
hist_db_prod_name=openaire_beta_historical_snapshots
hist_db_shadow_name=openaire_beta_historical_snapshots_shadow
hist_date=122023
hive_timeout=150000
hadoop_user_name=xxx
resumeFrom=CreateDB
2024-01-04 15:11:04 +02:00
Miriam Baglioni
cb14470ba6
added properties file in the forlder for the workflow of result to organization from inst repo propagation. Changes the path in the classes implementing the propagation
2023-12-22 14:50:05 +01:00
Miriam Baglioni
9f966b59d4
added properties file in the forlder for the workflow of result to community from semrel propagation. Changes the path in the classes implementing the propagation
2023-12-22 14:11:47 +01:00
Miriam Baglioni
2f3b5a133d
added properties file in the forlder for the workflow of result to community from organization propagation. Changes the path in the classes implementing the propagation
2023-12-22 13:56:40 +01:00
Miriam Baglioni
2f7b9ad815
added properties file in the forlder for the workflow of project to result propagation. Changes the path in the classes implementing the propagation
2023-12-22 11:46:15 +01:00
Miriam Baglioni
f2352e8a78
changed in the classes the path for the property files for the propagation of community from project
2023-12-22 11:43:34 +01:00
Miriam Baglioni
009730b3d1
added properties file in the forlder for the workflow of orcid propagation. Changes the path in the classes implementing the propagationchanged the path to the parameter file in the class for entitytoorganization propagation
2023-12-22 11:42:09 +01:00
Miriam Baglioni
89f269c7f4
changed the path to the parameter file in the class for entitytoorganization propagation
2023-12-22 11:37:50 +01:00
Miriam Baglioni
b06aea0adf
adding the bulkTag parameter file in the folder for the oozie workflow for bulkTagging. Changes the path in the class
2023-12-22 11:35:37 +01:00
Miriam Baglioni
3afd4aa57b
adjustments for country propagation
2023-12-22 11:27:30 +01:00
dimitrispie
ffdd03d2f4
Monitor Irish Stats WF
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Parameters (with examples):
stats_db_name=openaire_beta_stats_20231208
monitor_irish_db_name=openaire_beta_stats_monitor_ie_20231208b
monitor_irish_db_prod_name=openaire_beta_stats_monitor_ie
graph_db_name=openaire_beta_20231208
monitor_irish_db_shadow_name=openaire_beta_stats_monitor_ie_shadow
hive_timeout=150000
hadoop_user_name=dnet.beta
resumeFrom=Step1-buildIrishMonitorDB
2023-12-22 11:05:24 +02:00
dimitrispie
40b98d8182
Changes to indicators and funders definition
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- Changes result_refereed definition
- Added result_country indicator
- Added indi_pub_green_with_license indicator
- Added country from jurisdiction to funders
2023-12-22 10:29:20 +02:00
Claudio Atzori
62104790ae
added metaresourcetype to the result hive DB view
2023-12-21 12:27:10 +01:00
Miriam Baglioni
5011c4d11a
refactoring after compiletion
2023-12-20 15:57:26 +01:00
Miriam Baglioni
4740c808f7
-
2023-12-20 14:26:54 +01:00
Miriam Baglioni
d410ea8a41
added needed parameter
2023-12-19 12:15:01 +01:00
Sandro La Bruzzo
15fd93a2b6
uploaded input parameters on CreateBaseline WF
2023-12-18 12:21:55 +01:00
Sandro La Bruzzo
9d342a47da
updated the transformation Baseline workflow to include mdstore rollback/commit action
2023-12-18 11:48:57 +01:00
Miriam Baglioni
3eca5d2e1c
-
2023-12-18 09:55:27 +01:00
Miriam Baglioni
01ce0b9c76
[doiboost - preprocess] remove transition to orcid preparation from sequence of steps at the beginning of the workflow
2023-12-15 12:24:55 +01:00
Miriam Baglioni
0d8e496a63
-
2023-12-15 12:16:43 +01:00
Claudio Atzori
a59be5779e
Merge pull request '9078_xml_records_irish_tender' ( #368 ) from 9078_xml_records_irish_tender into beta
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Reviewed-on: #368
2023-12-12 12:34:43 +01:00
Claudio Atzori
ff924215b8
[graph provision] added tests for new peerreviewed field
2023-12-12 11:21:30 +01:00
Claudio Atzori
a6d635e695
Merge branch 'beta' into 9078_xml_records_irish_tender
2023-12-12 11:06:42 +01:00
Claudio Atzori
98cce5bfb2
code formatting
2023-12-12 09:59:05 +01:00
Claudio Atzori
84d54643cf
[cleaning] allow enriched orcids to pass the cleaning, rule out non-orcid author pids
2023-12-12 09:57:00 +01:00
Claudio Atzori
7e8eff40c1
[graph provision] added tests for the new model fields
2023-12-12 08:54:15 +01:00
Miriam Baglioni
8752d275fa
removed not needed parameter
2023-12-09 15:24:45 +01:00
Miriam Baglioni
d4eedada71
adjusting workflow definition
2023-12-09 15:20:11 +01:00
Claudio Atzori
aba95ed1d1
code formatting
2023-12-08 17:06:19 +01:00
Claudio Atzori
2877839df0
Merge pull request '[graph cleaning] added cleaning for result.publisher and result.instance.license' ( #366 ) from clean_license_publisher into beta
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Reviewed-on: #366
2023-12-08 16:58:37 +01:00
Claudio Atzori
34abd0fc43
Merge branch 'beta' into clean_license_publisher
2023-12-08 16:58:27 +01:00
Claudio Atzori
cb71a7936b
[graph cleaning] avoid stack overflow error when navigating Oaf objects declaring an Enum
2023-12-07 23:09:54 +01:00
Claudio Atzori
70eb1796b2
logging typo
2023-12-07 14:08:04 +01:00