Commit Graph

95 Commits

Author SHA1 Message Date
Enrico Ottonello 5c17e768b2 set wf configuration with spark.dynamicAllocation.maxExecutors 20 over 20 input partitions 2020-11-23 16:01:23 +01:00
Enrico Ottonello 97c8111847 action to convert lambda file in seq file; spark action to download updated authors 2020-11-23 09:49:22 +01:00
Enrico Ottonello c0c2e05eae added wf to extracting authors and works xml data from orcid dump to hdfs; added wf to download the lamda file (containing last orcid update informations) from orcid to hdfs 2020-11-17 18:23:12 +01:00
Enrico Ottonello 005f849674 added compression to output dataset 2020-11-13 12:45:31 +01:00
Enrico Ottonello 13f28fa225 moved AuthorData to dhp-schemas; added other names to author data 2020-11-12 17:43:32 +01:00
Enrico Ottonello 1f861f2b0d now wf output is a sequence file with the format seq("eu.dnetlib.dhp.schema.oaf.Publication",eu.dnetlib.dhp.schema.action.AtomicActions) 2020-11-11 17:38:50 +01:00
Enrico Ottonello 1513174d7e added further test case 2020-11-10 11:44:55 +01:00
Enrico Ottonello 6bc7dbeca7 first version of dataset successful generated from orcid dump 2020 2020-11-06 13:47:50 +01:00
Enrico Ottonello 9818e74a70 added dependency version in main pom.xml for orcid no doi 2020-10-22 16:38:00 +02:00
Enrico Ottonello 210a50e4f4 replaced null value 2020-10-22 16:24:42 +02:00
Enrico Ottonello 1139d6568d replaced null value with a more safe empty string as return value 2020-10-22 15:32:26 +02:00
Enrico Ottonello c58db1c8ea added filter on null value after map function 2020-10-22 15:11:02 +02:00
Enrico Ottonello 846ba30873 if typologies mapping fails, an exception will be propagated 2020-10-22 14:36:18 +02:00
Enrico Ottonello c3114ba0ae replaced null as return value with a more safe empty string 2020-10-22 14:21:31 +02:00
Enrico Ottonello c295c71ca0 added comment 2020-10-22 14:07:26 +02:00
Enrico Ottonello ab083f9946 propagate exception on parsing work (PR request) 2020-10-22 14:02:32 +02:00
sandro 3a81a940b7 solved bug on merge publication 2020-10-21 22:41:55 +02:00
Sandro La Bruzzo cd9c377d18 adpted scholexplorer Dump generation to the new Dataset definition 2020-10-08 10:10:13 +02:00
Sandro La Bruzzo c4a3c52e45 fixed Doiboost bug in the identifier 2020-10-01 15:46:44 +02:00
Enrico Ottonello a97ad20c7b exception is now propagated (PR review) 2020-09-22 10:46:34 +02:00
Enrico Ottonello 9e8e7fe6ef add comments 2020-09-15 11:32:49 +02:00
Enrico Ottonello 0377b40fba output to one parquet file 2020-07-30 18:38:07 +02:00
Enrico Ottonello 196f36c6ed fix publication dataset creation 2020-07-30 13:38:33 +02:00
Enrico Ottonello c82b15b5f4 migrate configuration to ocean, fix publication dataset creation 2020-07-28 15:23:52 +02:00
Enrico Ottonello ca37d3427b separate workflow to parse orcid summaries, activities and generate dataset with no doi publications; test 2020-07-03 23:30:31 +02:00
Enrico Ottonello 1729cc5cf3 publication conversion from json to oaf test 2020-07-02 18:46:20 +02:00
Enrico Ottonello 5525f57ec8 converter from orcid work json to oaf 2020-07-01 18:36:14 +02:00
Enrico Ottonello b7b6be12a5 fixed enriched works generation 2020-06-29 18:03:16 +02:00
Enrico Ottonello b2213b6435 merged with dnet version 2020-06-26 17:27:34 +02:00
Enrico Ottonello c5e149c46e Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop into orcid-no-doi 2020-06-26 16:15:38 +02:00
Enrico Ottonello d6498278ed added workflow to generate seq(orcidId,work) and seq(orcidId,enrichedWork) 2020-06-25 18:43:29 +02:00
Sandro La Bruzzo a6c0faac70 added test to verify secondary sorting 2020-06-25 10:48:15 +02:00
Enrico Ottonello fcbb4c1489 parser of orcid publication data from xml original dump 2020-06-24 16:29:32 +02:00
Claudio Atzori 67c7b31ba6 Merge branch 'master' into graph_cleaning 2020-06-10 15:00:35 +02:00
Claudio Atzori a2fdf85ba1 WIP: graph cleaner implementation 2020-06-09 19:52:53 +02:00
Alessia Bardi 2d3f7d1eb4 fixed log classes to make the ORCID test run 2020-06-09 18:07:14 +02:00
Alessia Bardi fc4d220964 updated function name for SNSF 2020-06-09 17:05:31 +02:00
Alessia Bardi d6de406e11 fixed classid for subjects 2020-06-09 14:43:34 +02:00
Alessia Bardi f072125152 map volume and issue in journal information from MAG 2020-06-09 14:32:10 +02:00
Alessia Bardi b7cb1163ea identifiers always start with 50 2020-06-09 10:39:11 +02:00
Alessia Bardi 9fd25887f7 Result identifiers all start with 50| 2020-06-08 19:32:24 +02:00
Alessia Bardi 16cb073b15 set the instance datepfacceptance with the Crossref createdDate in case the issuedDate is blank 2020-06-08 19:06:03 +02:00
Sandro La Bruzzo 7ac1ba2e35 improvement DOIBoost 2020-06-04 14:39:20 +02:00
Sandro La Bruzzo 13815d5d13 improvement DOIBoost 2020-06-01 17:52:12 +02:00
Sandro La Bruzzo b87b3ddb6b changed mapping ORCIDToOAF 2020-05-29 09:32:04 +02:00
Sandro La Bruzzo 7d29b61c62 code refactor 2020-05-28 09:57:46 +02:00
Sandro La Bruzzo 25f52e19a4 implemented generation of ActionSet 2020-05-26 09:15:33 +02:00
Sandro La Bruzzo 2408083566 implemented filtering step 2020-05-23 08:46:49 +02:00
Sandro La Bruzzo 147dd389bf minor fix 2020-05-22 20:51:42 +02:00
Sandro La Bruzzo 22936d0877 Merge branch 'doiboost' of code-repo.d4science.org:D-Net/dnet-hadoop into doiboost 2020-05-22 15:15:17 +02:00