Sandro La Bruzzo
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eaf0dc68a2
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fixed indexing
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2020-08-11 09:17:03 +02:00 |
 Miriam Baglioni
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1991a49f70
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removed reference to isLookUp to get the communityMap
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2020-08-10 18:02:56 +02:00 |
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Miriam Baglioni
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c378c38546
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disabled test. The testing functionalities for hte upload in Zenode are moved to common
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2020-08-10 12:41:11 +02:00 |
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Miriam Baglioni
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63ad0ed209
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changed to use communityMapPath instead of IsLookUp
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2020-08-10 12:40:19 +02:00 |
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Miriam Baglioni
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cec795f2ea
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changed resources to mirror changes in the model
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2020-08-10 12:39:35 +02:00 |
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Miriam Baglioni
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f50e3e7333
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changed the class for which to generate the schema
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2020-08-10 12:03:49 +02:00 |
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Miriam Baglioni
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b8c26f656c
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test using communityMapPath instead of isLookUp
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2020-08-10 12:02:55 +02:00 |
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Miriam Baglioni
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fe88904df0
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changed the wf definition
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2020-08-10 12:01:14 +02:00 |
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Miriam Baglioni
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87856467e2
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removed isLookUpUrl and added code to read from HDSF the communitymap
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2020-08-10 11:38:41 +02:00 |
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Miriam Baglioni
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1cf7043e26
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removed isLookUoUrl from the parameters
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2020-08-10 11:38:03 +02:00 |
 Claudio Atzori
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cf6b68ce5a
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Merge pull request 'data provision workflow: add nodes to perform DELETE BY QUERY before the indexing begins and COMMIT after the indexing is completed' (#36) from provision_indexing into master
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2020-08-10 11:16:29 +02:00 |
 Sandro La Bruzzo
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0ade33ad15
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updated mergeFrom function for DLI Unknown
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2020-08-10 10:18:35 +02:00 |
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Miriam Baglioni
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46986aae2d
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added the new parameter for newdeposion/newversion and concept_record_id
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2020-08-07 18:00:06 +02:00 |
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Miriam Baglioni
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3aedfdf0d6
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added option to do a new deposition or new version of an old deposition
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2020-08-07 17:49:14 +02:00 |
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Miriam Baglioni
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1b3ad1bce6
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filter out authors pid (only orcid). Added check to get unique provenance for context id. filtr out countries with code UNKNOWN
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2020-08-07 17:48:18 +02:00 |
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Miriam Baglioni
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5ceb8c5f0a
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moved constants from graph.Constants
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2020-08-07 17:46:47 +02:00 |
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Miriam Baglioni
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6c65c93c0e
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refactoring
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2020-08-07 17:45:35 +02:00 |
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Miriam Baglioni
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68adf86fe4
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refactoring
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2020-08-07 17:43:20 +02:00 |
|
Miriam Baglioni
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26d2ad6ebb
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refactoring
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2020-08-07 17:41:56 +02:00 |
|
Miriam Baglioni
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9675af7965
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refactoring
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2020-08-07 17:41:07 +02:00 |
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Miriam Baglioni
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346a91f4d9
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Added constants
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2020-08-07 17:35:39 +02:00 |
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Miriam Baglioni
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d52b0e1797
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no use of IsLookUp. The query is done once and its result stored on HDFS. The path to the result is given instead of the isLookUpUrl
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2020-08-07 17:34:40 +02:00 |
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Miriam Baglioni
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ae1b7fbfdb
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changed method signature from set of mapkey entries to String representing path on file system where to find the map
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2020-08-07 17:32:27 +02:00 |
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Miriam Baglioni
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931fa2ff00
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removed dependencies
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2020-08-07 16:46:37 +02:00 |
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Miriam Baglioni
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545ea9f77e
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moved in common. Zenodo response model and APIClient to deposit in Zenodo
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2020-08-07 16:44:51 +02:00 |
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Sandro La Bruzzo
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ddb1446ceb
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fixed test
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2020-08-07 11:34:33 +02:00 |
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Sandro La Bruzzo
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718bc7bbc8
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implemented provision workflows using the new implementation with Dataset
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2020-08-07 11:05:18 +02:00 |
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Miriam Baglioni
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da9b012c15
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fixed dewcription
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2020-08-06 11:55:44 +02:00 |
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Miriam Baglioni
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6dbadcf181
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the new schema for the dumped result
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2020-08-06 11:05:56 +02:00 |
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Sandro La Bruzzo
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a44e5abaa7
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reformat code
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2020-08-06 10:30:22 +02:00 |
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Sandro La Bruzzo
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4fb1821fab
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Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop
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2020-08-06 10:28:31 +02:00 |
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Sandro La Bruzzo
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9d9e9edbd2
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improved extractEntity Relation workflows using dataset
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2020-08-06 10:28:24 +02:00 |
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Miriam Baglioni
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adf0ca5aa7
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test to send is from hdfs
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2020-08-05 14:24:43 +02:00 |
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Miriam Baglioni
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14eda4f46e
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added method to try to put inputstream to zenodo
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2020-08-05 14:18:25 +02:00 |
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Miriam Baglioni
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e737a47270
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added classes to try to send input stream to zenodo for the upload
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2020-08-05 14:17:40 +02:00 |
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Miriam Baglioni
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873e9cd50c
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changed hadoop setting to connect to s3
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2020-08-04 15:37:25 +02:00 |
 Alessia Bardi
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a29565ff57
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code formatting
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2020-08-04 12:55:27 +02:00 |
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Alessia Bardi
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01db29e208
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fixes redmine issue #5846: datacite and its different namespace declarations
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2020-08-04 12:53:48 +02:00 |
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Alessia Bardi
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b4e4e5f858
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do not duplicate result PIDs
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2020-08-04 12:52:14 +02:00 |
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Alessia Bardi
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09a323d18d
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testing a dataset from Nakala
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2020-08-04 12:50:52 +02:00 |
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Alessia Bardi
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c35bf486cc
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added handle among the possible PIDs
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2020-08-04 12:50:12 +02:00 |
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Miriam Baglioni
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5b651abf82
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merge branch with master
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2020-08-04 10:14:07 +02:00 |
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Miriam Baglioni
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88e4c3b751
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added default trust to context bulktagged
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2020-08-04 10:13:25 +02:00 |
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Miriam Baglioni
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f9342cb484
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added constant
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2020-08-03 18:32:35 +02:00 |
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Miriam Baglioni
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96c3c891f4
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added trust
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2020-08-03 18:32:17 +02:00 |
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Miriam Baglioni
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53656600ad
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changed XQuery to select only community and ri with status not hidden
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2020-08-03 18:29:30 +02:00 |
|
Miriam Baglioni
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b34177d8ef
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merge upstream
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2020-08-03 18:13:42 +02:00 |
|
Miriam Baglioni
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901ae37f7b
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added step to workflow
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2020-08-03 18:12:54 +02:00 |
|
Miriam Baglioni
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fa38cdb10b
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added resource
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2020-08-03 18:11:12 +02:00 |
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Miriam Baglioni
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e9fcc0b2f1
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commented test unit - to decide change for mirroring the changed logics
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2020-08-03 18:10:53 +02:00 |
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Miriam Baglioni
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e43aeb139a
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added new property file and changed some parameter to old files
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2020-08-03 18:07:28 +02:00 |
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Miriam Baglioni
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aa9f3d9698
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changed logic for save in s3 directly
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2020-08-03 18:06:18 +02:00 |
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Miriam Baglioni
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d465f0eec9
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added fulltext to result
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2020-08-03 18:03:27 +02:00 |
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Miriam Baglioni
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ec4b392d12
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added new dependencies for writing on s3
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2020-08-03 17:57:04 +02:00 |
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Miriam Baglioni
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c892c7dfa7
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changed to query for community map just once and save the result for remaining executions
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2020-08-03 17:56:31 +02:00 |
|
Claudio Atzori
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3a11a387a9
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data provision workflow enhancement: added nodes to perform DELETE BY QUERY before the indexing begins and COMMIT after the indexing is completed
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2020-08-03 14:28:08 +02:00 |
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Alessia Bardi
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8cc067fe76
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specific test for claims
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2020-08-03 11:17:50 +02:00 |
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Claudio Atzori
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a89b6cc3ba
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Merge pull request 'nsprefix_blacklist' (#34) from nsprefix_blacklist into master
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2020-07-31 11:52:23 +02:00 |
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Sandro La Bruzzo
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0c3bc9ea4b
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Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop
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2020-07-31 09:07:18 +02:00 |
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Sandro La Bruzzo
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168bfb496a
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adopted dedup to the new schema
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2020-07-31 09:06:57 +02:00 |
 Michele Artini
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652b13abb6
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Merge branch 'master' into nsprefix_blacklist
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2020-07-31 07:58:37 +02:00 |
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Claudio Atzori
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cd631bb5bc
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defaults fixed in the cleaning workflow forces result.publisher to NULL when result.publisher.value in empty
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2020-07-30 17:03:53 +02:00 |
|
Miriam Baglioni
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872d7783fc
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-
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2020-07-30 16:50:36 +02:00 |
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Miriam Baglioni
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57c87b7653
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re-implemented to fix issue on not serializable Set<String> variable
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2020-07-30 16:43:43 +02:00 |
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Miriam Baglioni
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ef8e5957b5
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added specific directory where to save results
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2020-07-30 16:42:46 +02:00 |
|
Miriam Baglioni
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75f3361c85
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-
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2020-07-30 16:41:31 +02:00 |
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Miriam Baglioni
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3f695b25fa
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refactoring
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2020-07-30 16:40:15 +02:00 |
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Miriam Baglioni
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e623f12bef
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refactoring
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2020-07-30 16:32:59 +02:00 |
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Miriam Baglioni
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ff7d05abb4
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added support class to store the couple organizationId representativeId gaot from sql query on hive
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2020-07-30 16:32:04 +02:00 |
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Miriam Baglioni
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cf6d80b2ab
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added command to close the writer
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2020-07-30 16:31:22 +02:00 |
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Miriam Baglioni
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f985bca37b
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added USER_CLAIM constant value
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2020-07-30 16:25:26 +02:00 |
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Claudio Atzori
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4bbfcf1ac6
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Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop
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2020-07-30 16:25:06 +02:00 |
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Claudio Atzori
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4ff8007518
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added function to set the missing vocabulary names, used in the cleaning workflow as a pre-cleaning step
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2020-07-30 16:24:39 +02:00 |
|
Miriam Baglioni
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6f1c40a933
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-
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2020-07-30 16:24:28 +02:00 |
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Miriam Baglioni
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2b66a93f9e
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added property file that was missing
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2020-07-30 16:24:17 +02:00 |
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Michele Artini
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bdece15ca0
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blacklist of nsprefix
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2020-07-30 16:13:38 +02:00 |
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Sandro La Bruzzo
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c97c8f0c44
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implemented new oozie job to extract entities in a separate dataset
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2020-07-30 12:13:58 +02:00 |
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Sandro La Bruzzo
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3010a362bc
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updated changing in the workflow of provision in the phase of aggregation. Removed serialization in JSON RDD and used spark Dataset
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2020-07-30 09:25:56 +02:00 |
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Sandro La Bruzzo
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487226f669
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Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop
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2020-07-30 09:25:39 +02:00 |
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Sandro La Bruzzo
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16ae3c9ccf
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updated changing in the workflow of provision in the phase of aggregation. Removed serialization in JSON RDD and used spark Dataset
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2020-07-30 09:25:32 +02:00 |
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Miriam Baglioni
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ee8420c6b3
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added resource for datasource test
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2020-07-29 18:28:43 +02:00 |
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Miriam Baglioni
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76bcab98ce
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added code to filter out null originalId from the dump
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2020-07-29 18:28:21 +02:00 |
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Miriam Baglioni
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ef1d8aef17
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added one test to verify the dump for the datasources
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2020-07-29 18:27:46 +02:00 |
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Miriam Baglioni
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86bab79512
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-
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2020-07-29 18:20:22 +02:00 |
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Miriam Baglioni
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31791dcf3d
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fixed wrong property file path name
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2020-07-29 18:20:08 +02:00 |
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Miriam Baglioni
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9e722aa1ef
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-
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2020-07-29 18:00:08 +02:00 |
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Miriam Baglioni
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d22f106f27
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added constant to identify datasource associated to funders
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2020-07-29 17:56:55 +02:00 |
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Miriam Baglioni
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40e194fe2f
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added check to not dump datasources related to funders
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2020-07-29 17:56:18 +02:00 |
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Miriam Baglioni
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b48934f6df
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changed the workflow name
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2020-07-29 17:43:43 +02:00 |
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Miriam Baglioni
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1433db825d
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refactorign
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2020-07-29 17:43:24 +02:00 |
|
Miriam Baglioni
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074e9ab75e
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refactoring
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2020-07-29 17:42:50 +02:00 |
|
Miriam Baglioni
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8ad8dac7d4
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merge branch with fork master
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2020-07-29 17:38:28 +02:00 |
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Miriam Baglioni
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9e997e63a2
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merge upstream
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2020-07-29 17:38:14 +02:00 |
|
Miriam Baglioni
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9fa82dc93b
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fixed issue
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2020-07-29 17:36:16 +02:00 |
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Miriam Baglioni
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8907648d6a
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-
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2020-07-29 17:35:47 +02:00 |
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Miriam Baglioni
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536e7f6352
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added and changed resources for testing of the whole graph dump and of community related products dumps
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2020-07-29 17:33:34 +02:00 |
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Miriam Baglioni
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4d7f590493
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testings for the whole graph dump
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2020-07-29 17:32:37 +02:00 |
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Miriam Baglioni
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a2f73ec2c7
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changed due to changes in the model
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2020-07-29 17:32:02 +02:00 |
|
Miriam Baglioni
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481585e9d3
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-
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2020-07-29 17:31:41 +02:00 |
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Miriam Baglioni
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40a8dafbdc
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-
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2020-07-29 17:30:44 +02:00 |