 Claudio Atzori
|
83504ecace
|
limiting the maximum number of authors allowed in XML records to MAX_AUTHORS = 200; authors with ORCID can exceed that limit
|
2020-05-28 13:52:30 +02:00 |
|
Claudio Atzori
|
ef11593068
|
JoinedEntity.links defined as empty list by default
|
2020-05-28 13:50:44 +02:00 |
|
Claudio Atzori
|
5dea155a87
|
increased number of partitions produced by the join_all_entities phase as well as spark.sql.shuffle.partitions in adjancency_lists phase
|
2020-05-28 13:49:59 +02:00 |
|
Claudio Atzori
|
fdd54bad1c
|
code formatting
|
2020-05-27 19:31:54 +02:00 |
|
Claudio Atzori
|
cfd753217c
|
repartition the join_entities in 24k files
|
2020-05-27 12:44:01 +02:00 |
|
Claudio Atzori
|
2f1a623d09
|
sync from master branch
|
2020-05-27 12:39:58 +02:00 |
|
Claudio Atzori
|
9e4ec1543b
|
updated test
|
2020-05-27 12:38:42 +02:00 |
|
Claudio Atzori
|
8047d16dd9
|
added RDD based adjacency list creation procedure
|
2020-05-27 12:38:12 +02:00 |
|
Claudio Atzori
|
f057dcdf65
|
limit the max number of externalreferences to MAX_EXTERNAL_ENTITIES
|
2020-05-27 12:37:33 +02:00 |
|
Claudio Atzori
|
4e36d689dd
|
fixed XML serialization for children sub-elements (duplicates & externalreferences)
|
2020-05-26 18:30:40 +02:00 |
|
Claudio Atzori
|
b8e541a454
|
fixing repeated organization.websiteurl in organization entities (#5645) as well as project.ecinternationalorganizationeurinterests
|
2020-05-26 10:30:09 +02:00 |
|
Claudio Atzori
|
7582532e73
|
[maven-release-plugin] prepare for next development iteration
|
2020-05-25 19:48:18 +02:00 |
|
Claudio Atzori
|
01c2e93395
|
[maven-release-plugin] prepare release dhp-1.2.1
|
2020-05-25 19:48:14 +02:00 |
|
Claudio Atzori
|
925d933204
|
making XmlRecordFactory immune to graph encoding changes (mostly to avoid NPEs)
|
2020-05-22 08:50:44 +02:00 |
|
Claudio Atzori
|
b33dd58be4
|
replaced parameter 'reuseRecords' with 'resumeFrom', allowing to restart the provision workflow execution from any step, useful for manual submissions or debugging
|
2020-05-22 08:50:06 +02:00 |
|
Claudio Atzori
|
dbfb9c19fe
|
minor changes
|
2020-05-21 10:00:14 +02:00 |
|
Claudio Atzori
|
d7d2a0637f
|
added extra parameters to the provision indexing workflow
|
2020-05-20 14:55:38 +02:00 |
|
Claudio Atzori
|
0bdfbb0a57
|
reintroduced RDD based relation cut off procedure
|
2020-05-19 15:02:21 +02:00 |
|
Claudio Atzori
|
60c40618d3
|
[maven-release-plugin] prepare for next development iteration
|
2020-05-11 10:17:14 +02:00 |
|
Claudio Atzori
|
c267d958d5
|
[maven-release-plugin] prepare release dhp-1.2.0
|
2020-05-11 10:17:10 +02:00 |
|
Claudio Atzori
|
42f1a2bf94
|
bumped project version to 1.2.0-SNAPSHOT
|
2020-05-11 10:05:57 +02:00 |
|
Claudio Atzori
|
0ccc864ad9
|
[maven-release-plugin] prepare for next development iteration
|
2020-05-08 17:01:31 +02:00 |
|
Claudio Atzori
|
6e47c724c6
|
[maven-release-plugin] prepare release dhp-1.1.7
|
2020-05-08 17:01:27 +02:00 |
|
Claudio Atzori
|
8c67073a07
|
force speculative execution to false
|
2020-05-08 09:42:21 +02:00 |
|
Claudio Atzori
|
bac37b3973
|
fixed children expansion in XML records
|
2020-05-04 11:51:17 +02:00 |
|
Claudio Atzori
|
077ccd8743
|
stats wf properties cleanup
|
2020-05-04 11:41:46 +02:00 |
|
Claudio Atzori
|
439c6255a2
|
cleanup
|
2020-04-29 19:09:07 +02:00 |
|
Claudio Atzori
|
6f5b899038
|
reformatted code according to the updated style descriptor
|
2020-04-28 11:23:29 +02:00 |
|
Claudio Atzori
|
a0bdbacdae
|
switched automatic code formatting plugin to net.revelc.code.formatter:formatter-maven-plugin
|
2020-04-27 14:52:31 +02:00 |
|
Claudio Atzori
|
7a3f8085f7
|
switched automatic code formatting plugin to net.revelc.code.formatter:formatter-maven-plugin
|
2020-04-27 14:45:40 +02:00 |
|
Claudio Atzori
|
1e7583c5a6
|
filtered invisible records in data provision workflow
|
2020-04-23 07:51:34 +02:00 |
|
Claudio Atzori
|
0b55795d4d
|
small adjustments in the provisioning workflow
|
2020-04-21 16:15:04 +02:00 |
|
Claudio Atzori
|
d772d967aa
|
restored changes from master branch
|
2020-04-20 18:53:06 +02:00 |
miconis
|
4da13e4570
|
Revert "Merge branch 'master' into deduptesting"
This reverts commit 772f75d167, reversing
changes made to 5f45f2c77f.
|
2020-04-20 16:04:49 +02:00 |
|
Claudio Atzori
|
d714bfb4d4
|
collectedfrom field moved in common parent class Oaf.java
|
2020-04-20 12:25:19 +02:00 |
|
Claudio Atzori
|
ad7a131b18
|
introduced common project code formatting plugin, works on the commit hook, based on https://github.com/Cosium/git-code-format-maven-plugin, applied to each java class in the project
|
2020-04-18 12:42:58 +02:00 |
|
Claudio Atzori
|
d74e128aa6
|
Utility classes moved in dhp-common and dhp-schemas
|
2020-04-07 11:56:22 +02:00 |
|
Claudio Atzori
|
1a1a026a18
|
we do expect to find field bestaccessright already defined. No need to add it again
|
2020-04-07 08:55:33 +02:00 |
|
Claudio Atzori
|
fbdd18a96b
|
using dataset based relation preparation procedure
|
2020-04-07 08:54:39 +02:00 |
|
Claudio Atzori
|
77f59b1b10
|
dataset based provision WIP
|
2020-04-06 19:37:27 +02:00 |
|
Claudio Atzori
|
e355961997
|
dataset based provision WIP
|
2020-04-06 17:34:25 +02:00 |
|
Claudio Atzori
|
ca345aaad3
|
dataset based provision WIP
|
2020-04-06 15:33:31 +02:00 |
|
Claudio Atzori
|
c8f4b95464
|
dataset based provision WIP
|
2020-04-06 08:59:58 +02:00 |
|
Claudio Atzori
|
eb2f5f3198
|
dataset based provision WIP
|
2020-04-04 17:41:31 +02:00 |
|
Claudio Atzori
|
3d1b637cab
|
dataset based provision WIP
|
2020-04-04 14:03:43 +02:00 |
|
Claudio Atzori
|
24b2c9012e
|
dataset based provision WIP
|
2020-04-02 18:44:09 +02:00 |
|
Claudio Atzori
|
daa26acc9d
|
dataset based provision WIP, fixed spark2EventLogDir
|
2020-04-02 16:15:50 +02:00 |
|
Claudio Atzori
|
9c7092416a
|
dataset based provision WIP
|
2020-04-01 19:07:30 +02:00 |
|
Claudio Atzori
|
1402eb1fe7
|
cleanup
|
2020-04-01 15:38:50 +02:00 |
|
Claudio Atzori
|
adcdd2d05e
|
WIP: reimplementing the adjacency list construction process using spark Datasets
|
2020-04-01 14:56:57 +02:00 |
|
Claudio Atzori
|
377e1ba840
|
[maven-release-plugin] prepare for next development iteration
|
2020-03-30 20:06:00 +02:00 |
|
Claudio Atzori
|
76d9315129
|
[maven-release-plugin] prepare release dhp-1.1.6
|
2020-03-30 20:05:56 +02:00 |
|
Claudio Atzori
|
ef429010ee
|
removed log file and job-override.properties
|
2020-03-30 20:00:58 +02:00 |
|
Claudio Atzori
|
0fbec69b82
|
use oozie prepare statement to cleanup working directories
|
2020-03-30 19:48:41 +02:00 |
|
Claudio Atzori
|
f3f9affd49
|
allow dynamic executors to build XML records
|
2020-03-30 13:12:11 +02:00 |
|
Claudio Atzori
|
2e2d4c4c68
|
adjusted path to template resource
|
2020-03-30 13:11:49 +02:00 |
|
Claudio Atzori
|
673e744649
|
moved openaire specific implementations under dedicated package eu.dnetlib.dhp.oa
|
2020-03-27 10:42:17 +01:00 |
 Michele Artini
|
ebe45003d9
|
fixed some junit packages
|
2020-03-25 16:45:03 +01:00 |
|
Claudio Atzori
|
51d0c9bdd7
|
integrated changes from branch dedupTest
|
2020-03-25 15:15:41 +01:00 |
|
Claudio Atzori
|
6cb0a9bff0
|
dedup wf directory structure aligned with project commons
|
2020-03-20 16:48:14 +01:00 |
|
Claudio Atzori
|
abe8fb69a2
|
added global properties, moved postprocessing script inside the oozie_app directory
|
2020-03-18 15:43:54 +01:00 |
|
Claudio Atzori
|
aeb01fa353
|
reading from newline delimited json textfiles instead of sequence files
|
2020-03-17 11:57:24 +01:00 |
|
Claudio Atzori
|
a3f184fd3f
|
added field websiteurl in related organizations
|
2020-03-10 17:08:58 +01:00 |
|
Claudio Atzori
|
0e95544495
|
fixed serialization for datasource subjects
|
2020-03-10 17:07:44 +01:00 |
|
Claudio Atzori
|
5e342a555c
|
no need to compute the inverse relClass, fixed text() in xpath expressions
|
2020-03-05 12:51:48 +01:00 |
|
Claudio Atzori
|
6ec04d4e02
|
specified column used to perform the join operation in the javadoc
|
2020-03-05 12:50:38 +01:00 |
|
Claudio Atzori
|
1e563bc15e
|
introduced distinct properties driving the resouce usage for the XML record creation and the indexing phase
|
2020-03-04 10:55:11 +01:00 |
|
Claudio Atzori
|
bc7cfd5975
|
indexing workflow WIP: fixed projects fundingtree xml conversion, prioritized links between results and projects when limiting them to 100 in the join procedure
|
2020-03-02 17:03:07 +01:00 |
|
Claudio Atzori
|
60bc2b1a20
|
drop the hive DB before populating it from scratch
|
2020-02-27 10:10:55 +01:00 |
|
Claudio Atzori
|
6a73fd5da5
|
in order to reuse the same XmlRecordFactory across different tasks, the state of contexts must be one per record built
|
2020-02-21 09:17:19 +01:00 |
|
Claudio Atzori
|
33185fd0b7
|
ISLookupClientFactory moved in dhp-common
|
2020-02-19 16:56:38 +01:00 |
|
Claudio Atzori
|
ed76521d9b
|
removed stale test resources, will be re-added later on
|
2020-02-18 11:51:08 +01:00 |
|
Claudio Atzori
|
0f364605ff
|
removed stale tests, need to reimplemente them anyway
|
2020-02-18 11:48:19 +01:00 |
|
Claudio Atzori
|
56d1810a66
|
working procedure for records indexing using Spark, via lib com.lucidworks.spark:spark-solr
|
2020-02-14 12:28:52 +01:00 |
|
Claudio Atzori
|
1fee6e2b7e
|
implemented XML records construction and serialization, indexing WIP
|
2020-02-13 16:53:27 +01:00 |
|
Claudio Atzori
|
7ba0f44d05
|
WIP
|
2020-01-30 18:21:07 +01:00 |
|
Claudio Atzori
|
49ef2f4eb1
|
removed input parameter specification, SparkXmlRecordBuilderJob doesn't need hive
|
2020-01-30 18:20:26 +01:00 |
|
Claudio Atzori
|
b5e1e2e5b2
|
reintegrated changes from fcbc4ccd70
|
2020-01-30 18:11:04 +01:00 |
|
Claudio Atzori
|
7bacd6812e
|
Merge branch 'provision_indexing' of https://code-repo.d4science.org/D-Net/dnet-hadoop into HEAD
Conflicts:
dhp-workflows/dhp-graph-provision/src/main/java/eu/dnetlib/dhp/graph/GraphJoiner.java
dhp-workflows/dhp-graph-provision/src/main/java/eu/dnetlib/dhp/graph/MappingUtils.java
dhp-workflows/dhp-graph-provision/src/main/java/eu/dnetlib/dhp/graph/RelatedEntity.java
dhp-workflows/dhp-graph-provision/src/main/java/eu/dnetlib/dhp/graph/SparkXmlRecordBuilderJob.java
|
2020-01-30 17:59:46 +01:00 |
|
Claudio Atzori
|
b2691a3b0a
|
save adjacency list as JoinedEntity
|
2020-01-30 17:46:29 +01:00 |
|
Claudio Atzori
|
8c2aff99b0
|
joining entities using T x R x S, WIP: last representation based on LinkedEntity type
|
2020-01-29 15:40:33 +01:00 |
|
Claudio Atzori
|
fcbc4ccd70
|
a bit of docs doesn't hurt
|
2020-01-24 08:43:23 +01:00 |
|
Claudio Atzori
|
a55f5fecc6
|
joining entities using T x R x S method with groupByKey, WIP: making target objects (T) have lower memory footprint
|
2020-01-24 08:17:53 +01:00 |
|
Claudio Atzori
|
799929c1e3
|
joining entities using T x R x S method with groupByKey
|
2020-01-21 16:35:44 +01:00 |
|
Claudio Atzori
|
97c239ee0d
|
WIP: trying to find a way to build the records for the index
|
2020-01-16 12:02:28 +02:00 |
|
Claudio Atzori
|
7ba586d2e5
|
oozie workflow aimed to build the adjacency lists representation of the graph, needed to build the records to be indexed
|
2019-12-17 16:24:49 +01:00 |