Merge pull request '[WebCrawlAffiliation]remove from the creation of the action set the relations for pmc and pmid. Only doi are allowed' (#462) from affiliationFromWebCrawlOnlyDOI into beta
Reviewed-on: #462
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e39e8bbd47
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@ -105,8 +105,7 @@ public class CreateActionSetFromWebEntries implements Serializable {
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final String ror = ROR_PREFIX
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+ IdentifierFactory.md5(PidCleaner.normalizePidValue("ROR", row.getAs("ror")));
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ret.addAll(createAffiliationRelationPairDOI(row.getAs("doi"), ror));
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ret.addAll(createAffiliationRelationPairPMID(row.getAs("pmid"), ror));
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ret.addAll(createAffiliationRelationPairPMCID(row.getAs("pmcid"), ror));
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return ret
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.iterator();
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@ -140,8 +139,9 @@ public class CreateActionSetFromWebEntries implements Serializable {
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"institution", functions
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.explode(
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functions.col("institutions")))
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.selectExpr(
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"id", "doi", "ids.pmcid as pmcid", "ids.pmid as pmid", "institution.ror as ror",
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"id", "doi", "institution.ror as ror",
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"institution.country_code as country_code", "publication_year")
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.distinct();
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