A Knowledge graph representation of compounds and associated biological entities in the BY-COVID and EOSC Future project.
Current status
Please check the BY_COVID_update_August.ipynb for understanding step wise process of KG generation and KG statistics. The KG has been exported to formats such as graphml, sif and so on for visualizations in other platforms. For example, the graphml file can be imported to Cytoscape directly. These files are located in 'data\export' folder.
101017536
+ EOSC Future
+ 101046203
+ BY-COVID
+ The Monkeypox KG is built using viral and human proteins reported in different resources. Additionally, the KG represents chemicals tested against Monkeypox and their targets, associated biological processes, molecular functions, diseases and side effects.
KG status
Version 1 stats:
Version 2 stats (2nd September) :
Please check the graph.ipynb for understanding step wise process of KG generation and KG statistics. The KG has been exported to formats such as graphml, sif and so on for visualizations in other platforms. For example, the graphml file can be imported to Cytoscape directly. These files are located in 'data\export' folder.
101017536
+ EOSC Future
+ 101046203
+ BY-COVID
+ The attached .yaml file is used as input to the Dashboard State of the Environment, which is a science project of the ENVRI-FAIR science cluster within EOSC-FUTURE. The contents of the file enable the visualization of Ocean indicators on the dashboard. It is possible to download the attached file and change the contents to include indicators from different domains such as atmosphere or biodiversity.
101017536
+ EOSC Future
+