From c2bb03c8b5579db0e48875b4f85de5e9509844e0 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Fri, 23 Apr 2021 17:52:36 +0200 Subject: [PATCH 1/7] depending on external dhp-schemas module --- dhp-common/pom.xml | 1 - dhp-schemas/README.md | 11 - dhp-schemas/pom.xml | 78 --- .../dhp/schema/action/AtomicAction.java | 40 -- .../action/AtomicActionDeserializer.java | 32 -- .../schema/common/AccessRightComparator.java | 70 --- .../dnetlib/dhp/schema/common/EntityType.java | 21 - .../dhp/schema/common/MainEntityType.java | 7 - .../dhp/schema/common/ModelConstants.java | 175 ------ .../dhp/schema/common/ModelSupport.java | 512 ------------------ .../dhp/schema/common/RelationInverse.java | 46 -- .../eu/dnetlib/dhp/schema/dump/oaf/APC.java | 29 - .../dhp/schema/dump/oaf/AccessRight.java | 31 -- .../dnetlib/dhp/schema/dump/oaf/Author.java | 73 --- .../dhp/schema/dump/oaf/Container.java | 136 ----- .../dhp/schema/dump/oaf/ControlledField.java | 38 -- .../dnetlib/dhp/schema/dump/oaf/Country.java | 37 -- .../dnetlib/dhp/schema/dump/oaf/Funder.java | 36 -- .../dhp/schema/dump/oaf/GeoLocation.java | 53 -- .../dnetlib/dhp/schema/dump/oaf/Instance.java | 81 --- .../dnetlib/dhp/schema/dump/oaf/KeyValue.java | 48 -- .../eu/dnetlib/dhp/schema/dump/oaf/Pid.java | 45 -- .../dnetlib/dhp/schema/dump/oaf/Project.java | 51 -- .../dhp/schema/dump/oaf/Provenance.java | 41 -- .../dhp/schema/dump/oaf/Qualifier.java | 42 -- .../dnetlib/dhp/schema/dump/oaf/Result.java | 379 ------------- .../dnetlib/dhp/schema/dump/oaf/Subject.java | 34 -- .../dump/oaf/community/CommunityInstance.java | 36 -- .../dump/oaf/community/CommunityResult.java | 63 --- .../schema/dump/oaf/community/Context.java | 40 -- .../dhp/schema/dump/oaf/community/Funder.java | 23 - .../schema/dump/oaf/community/Project.java | 47 -- .../dhp/schema/dump/oaf/graph/Constants.java | 21 - .../dhp/schema/dump/oaf/graph/Datasource.java | 316 ----------- .../dhp/schema/dump/oaf/graph/Funder.java | 22 - .../dhp/schema/dump/oaf/graph/Fundings.java | 35 -- .../dhp/schema/dump/oaf/graph/Granted.java | 55 -- .../schema/dump/oaf/graph/GraphResult.java | 24 - .../dump/oaf/graph/H2020Classification.java | 82 --- .../dhp/schema/dump/oaf/graph/Node.java | 38 -- .../schema/dump/oaf/graph/Organization.java | 86 --- .../dhp/schema/dump/oaf/graph/Programme.java | 36 -- .../dhp/schema/dump/oaf/graph/Project.java | 192 ------- .../dhp/schema/dump/oaf/graph/RelType.java | 39 -- .../dhp/schema/dump/oaf/graph/Relation.java | 67 --- .../dump/oaf/graph/ResearchCommunity.java | 20 - .../dump/oaf/graph/ResearchInitiative.java | 75 --- .../eu/dnetlib/dhp/schema/oaf/Author.java | 90 --- .../eu/dnetlib/dhp/schema/oaf/Context.java | 46 -- .../eu/dnetlib/dhp/schema/oaf/Country.java | 34 -- .../eu/dnetlib/dhp/schema/oaf/DataInfo.java | 85 --- .../eu/dnetlib/dhp/schema/oaf/Dataset.java | 116 ---- .../eu/dnetlib/dhp/schema/oaf/Datasource.java | 472 ---------------- .../dhp/schema/oaf/ExternalReference.java | 120 ---- .../eu/dnetlib/dhp/schema/oaf/ExtraInfo.java | 77 --- .../java/eu/dnetlib/dhp/schema/oaf/Field.java | 45 -- .../dnetlib/dhp/schema/oaf/GeoLocation.java | 76 --- .../dhp/schema/oaf/H2020Classification.java | 88 --- .../dhp/schema/oaf/H2020Programme.java | 44 -- .../eu/dnetlib/dhp/schema/oaf/Instance.java | 173 ------ .../eu/dnetlib/dhp/schema/oaf/Journal.java | 167 ------ .../eu/dnetlib/dhp/schema/oaf/KeyValue.java | 74 --- .../eu/dnetlib/dhp/schema/oaf/Measure.java | 59 -- .../dnetlib/dhp/schema/oaf/OAIProvenance.java | 33 -- .../java/eu/dnetlib/dhp/schema/oaf/Oaf.java | 102 ---- .../eu/dnetlib/dhp/schema/oaf/OafEntity.java | 126 ----- .../dnetlib/dhp/schema/oaf/Organization.java | 214 -------- .../dhp/schema/oaf/OriginDescription.java | 88 --- .../dhp/schema/oaf/OtherResearchProduct.java | 60 -- .../eu/dnetlib/dhp/schema/oaf/Project.java | 358 ------------ .../dnetlib/dhp/schema/oaf/Publication.java | 39 -- .../eu/dnetlib/dhp/schema/oaf/Qualifier.java | 87 --- .../eu/dnetlib/dhp/schema/oaf/Relation.java | 168 ------ .../eu/dnetlib/dhp/schema/oaf/Result.java | 350 ------------ .../eu/dnetlib/dhp/schema/oaf/Software.java | 80 --- .../dhp/schema/oaf/StructuredProperty.java | 72 --- .../dnetlib/dhp/schema/orcid/AuthorData.java | 72 --- .../eu/dnetlib/dhp/schema/orcid/OrcidDOI.java | 25 - .../dhp/schema/scholexplorer/DLIDataset.java | 89 --- .../schema/scholexplorer/DLIPublication.java | 87 --- .../dhp/schema/scholexplorer/DLIUnknown.java | 132 ----- .../dhp/schema/scholexplorer/OafUtils.scala | 100 ---- .../schema/scholexplorer/ProvenaceInfo.java | 47 -- .../dhp/schema/action/AtomicActionTest.java | 41 -- .../dhp/schema/common/ModelSupportTest.java | 37 -- .../dnetlib/dhp/schema/oaf/MeasureTest.java | 57 -- .../eu/dnetlib/dhp/schema/oaf/MergeTest.java | 139 ----- .../dhp/schema/scholexplorer/DLItest.java | 84 --- dhp-workflows/dhp-actionmanager/pom.xml | 1 - dhp-workflows/dhp-aggregation/pom.xml | 1 - dhp-workflows/dhp-blacklist/pom.xml | 1 - dhp-workflows/dhp-broker-events/pom.xml | 1 - dhp-workflows/dhp-dedup-openaire/pom.xml | 1 - dhp-workflows/dhp-dedup-scholexplorer/pom.xml | 1 - dhp-workflows/dhp-doiboost/pom.xml | 1 - dhp-workflows/dhp-enrichment/pom.xml | 1 - dhp-workflows/dhp-graph-mapper/pom.xml | 1 - .../dhp-graph-provision-scholexplorer/pom.xml | 1 - dhp-workflows/dhp-graph-provision/pom.xml | 1 - pom.xml | 7 +- 100 files changed, 6 insertions(+), 7929 deletions(-) delete mode 100644 dhp-schemas/README.md delete mode 100644 dhp-schemas/pom.xml delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/action/AtomicAction.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/action/AtomicActionDeserializer.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/AccessRightComparator.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/EntityType.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/MainEntityType.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelConstants.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelSupport.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/RelationInverse.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/APC.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/AccessRight.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Author.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Container.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/ControlledField.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Country.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Funder.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/GeoLocation.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Instance.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/KeyValue.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Pid.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Project.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Provenance.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Qualifier.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Result.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Subject.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/CommunityInstance.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/CommunityResult.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Context.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Funder.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Project.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Constants.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Datasource.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Funder.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Fundings.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Granted.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/GraphResult.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/H2020Classification.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Node.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Organization.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Programme.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Project.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/RelType.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Relation.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/ResearchCommunity.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/ResearchInitiative.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Author.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Context.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Country.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/DataInfo.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Datasource.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/ExternalReference.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/ExtraInfo.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Field.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/GeoLocation.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/H2020Classification.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/H2020Programme.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Instance.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Journal.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/KeyValue.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Measure.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OAIProvenance.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Oaf.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OafEntity.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Organization.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OriginDescription.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Project.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Qualifier.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Relation.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/StructuredProperty.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorData.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/OrcidDOI.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIDataset.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIPublication.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIUnknown.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/OafUtils.scala delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/ProvenaceInfo.java delete mode 100644 dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/action/AtomicActionTest.java delete mode 100644 dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/common/ModelSupportTest.java delete mode 100644 dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/oaf/MeasureTest.java delete mode 100644 dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/oaf/MergeTest.java delete mode 100644 dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/scholexplorer/DLItest.java diff --git a/dhp-common/pom.xml b/dhp-common/pom.xml index 84c52ce8e..acac3594f 100644 --- a/dhp-common/pom.xml +++ b/dhp-common/pom.xml @@ -107,7 +107,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} diff --git a/dhp-schemas/README.md b/dhp-schemas/README.md deleted file mode 100644 index 7431cda42..000000000 --- a/dhp-schemas/README.md +++ /dev/null @@ -1,11 +0,0 @@ -Description of the project --------------------------- -This project defines **object schemas** of the OpenAIRE main entities and the relationships that intercur among them. -Namely it defines the model for - -- **research product (result)** which subclasses in publication, dataset, other research product, software -- **data source** object describing the data provider (institutional repository, aggregators, cris systems) -- **organization** research bodies managing a data source or participating to a research project -- **project** research project - -Te serialization of such objects (data store files) are used to pass data between workflow nodes in the processing pipeline. diff --git a/dhp-schemas/pom.xml b/dhp-schemas/pom.xml deleted file mode 100644 index 8e2a169f2..000000000 --- a/dhp-schemas/pom.xml +++ /dev/null @@ -1,78 +0,0 @@ - - - 4.0.0 - - - eu.dnetlib.dhp - dhp - 1.2.4-SNAPSHOT - ../pom.xml - - - dhp-schemas - jar - - This module contains common schema classes meant to be used across the dnet-hadoop submodules - - - - - net.alchim31.maven - scala-maven-plugin - 4.0.1 - - - scala-compile-first - initialize - - add-source - compile - - - - scala-test-compile - process-test-resources - - testCompile - - - - - ${scala.version} - - - - - - - - - - commons-io - commons-io - - - - org.apache.commons - commons-lang3 - - - - com.fasterxml.jackson.core - jackson-databind - - - - com.google.guava - guava - - - - commons-codec - commons-codec - - - - - - diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/action/AtomicAction.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/action/AtomicAction.java deleted file mode 100644 index 84b22c81c..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/action/AtomicAction.java +++ /dev/null @@ -1,40 +0,0 @@ - -package eu.dnetlib.dhp.schema.action; - -import java.io.Serializable; - -import com.fasterxml.jackson.databind.annotation.JsonDeserialize; - -import eu.dnetlib.dhp.schema.oaf.Oaf; - -@JsonDeserialize(using = AtomicActionDeserializer.class) -public class AtomicAction implements Serializable { - - private Class clazz; - - private T payload; - - public AtomicAction() { - } - - public AtomicAction(Class clazz, T payload) { - this.clazz = clazz; - this.payload = payload; - } - - public Class getClazz() { - return clazz; - } - - public void setClazz(Class clazz) { - this.clazz = clazz; - } - - public T getPayload() { - return payload; - } - - public void setPayload(T payload) { - this.payload = payload; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/action/AtomicActionDeserializer.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/action/AtomicActionDeserializer.java deleted file mode 100644 index 7b88e9c7e..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/action/AtomicActionDeserializer.java +++ /dev/null @@ -1,32 +0,0 @@ - -package eu.dnetlib.dhp.schema.action; - -import java.io.IOException; - -import com.fasterxml.jackson.core.JsonParser; -import com.fasterxml.jackson.core.JsonProcessingException; -import com.fasterxml.jackson.databind.DeserializationContext; -import com.fasterxml.jackson.databind.JsonDeserializer; -import com.fasterxml.jackson.databind.JsonNode; -import com.fasterxml.jackson.databind.ObjectMapper; - -import eu.dnetlib.dhp.schema.oaf.Oaf; - -public class AtomicActionDeserializer extends JsonDeserializer { - - @Override - public Object deserialize(JsonParser jp, DeserializationContext ctxt) - throws IOException { - JsonNode node = jp.getCodec().readTree(jp); - String classTag = node.get("clazz").asText(); - JsonNode payload = node.get("payload"); - ObjectMapper mapper = new ObjectMapper(); - - try { - final Class clazz = Class.forName(classTag); - return new AtomicAction(clazz, (Oaf) mapper.readValue(payload.toString(), clazz)); - } catch (ClassNotFoundException e) { - throw new IOException(e); - } - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/AccessRightComparator.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/AccessRightComparator.java deleted file mode 100644 index 6116bc479..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/AccessRightComparator.java +++ /dev/null @@ -1,70 +0,0 @@ - -package eu.dnetlib.dhp.schema.common; - -import java.util.Comparator; - -import eu.dnetlib.dhp.schema.oaf.AccessRight; -import eu.dnetlib.dhp.schema.oaf.Qualifier; - -public class AccessRightComparator implements Comparator { - - @Override - public int compare(T left, T right) { - - if (left == null && right == null) - return 0; - if (left == null) - return 1; - if (right == null) - return -1; - - String lClass = left.getClassid(); - String rClass = right.getClassid(); - - if (lClass.equals(rClass)) - return 0; - - if (lClass.equals("OPEN SOURCE")) - return -1; - if (rClass.equals("OPEN SOURCE")) - return 1; - - if (lClass.equals("OPEN")) - return -1; - if (rClass.equals("OPEN")) - return 1; - - if (lClass.equals("6MONTHS")) - return -1; - if (rClass.equals("6MONTHS")) - return 1; - - if (lClass.equals("12MONTHS")) - return -1; - if (rClass.equals("12MONTHS")) - return 1; - - if (lClass.equals("EMBARGO")) - return -1; - if (rClass.equals("EMBARGO")) - return 1; - - if (lClass.equals("RESTRICTED")) - return -1; - if (rClass.equals("RESTRICTED")) - return 1; - - if (lClass.equals("CLOSED")) - return -1; - if (rClass.equals("CLOSED")) - return 1; - - if (lClass.equals("UNKNOWN")) - return -1; - if (rClass.equals("UNKNOWN")) - return 1; - - // Else (but unlikely), lexicographical ordering will do. - return lClass.compareTo(rClass); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/EntityType.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/EntityType.java deleted file mode 100644 index 54f30cf33..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/EntityType.java +++ /dev/null @@ -1,21 +0,0 @@ - -package eu.dnetlib.dhp.schema.common; - -import eu.dnetlib.dhp.schema.oaf.OafEntity; - -/** Actual entity types in the Graph */ -public enum EntityType { - publication, dataset, otherresearchproduct, software, datasource, organization, project; - - /** - * Resolves the EntityType, given the relative class name - * - * @param clazz the given class name - * @param actual OafEntity subclass - * @return the EntityType associated to the given class - */ - public static EntityType fromClass(Class clazz) { - - return EntityType.valueOf(clazz.getSimpleName().toLowerCase()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/MainEntityType.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/MainEntityType.java deleted file mode 100644 index cda8ba484..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/MainEntityType.java +++ /dev/null @@ -1,7 +0,0 @@ - -package eu.dnetlib.dhp.schema.common; - -/** Main entity types in the Graph */ -public enum MainEntityType { - result, datasource, organization, project -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelConstants.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelConstants.java deleted file mode 100644 index 06781c474..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelConstants.java +++ /dev/null @@ -1,175 +0,0 @@ - -package eu.dnetlib.dhp.schema.common; - -import eu.dnetlib.dhp.schema.oaf.*; - -public class ModelConstants { - - public static final String ORCID = "orcid"; - public static final String ORCID_PENDING = "orcid_pending"; - public static final String ORCID_CLASSNAME = "Open Researcher and Contributor ID"; - - public static final String CROSSREF_ID = "10|openaire____::081b82f96300b6a6e3d282bad31cb6e2"; - public static final String DATACITE_ID = "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254"; - - public static final String EUROPE_PUBMED_CENTRAL_ID = "10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c"; - public static final String PUBMED_CENTRAL_ID = "10|opendoar____::eda80a3d5b344bc40f3bc04f65b7a357"; - public static final String ARXIV_ID = "10|opendoar____::6f4922f45568161a8cdf4ad2299f6d23"; - - public static final String OPENORGS_NAME = "OpenOrgs Database"; - - // VOCABULARY VALUE - public static final String ACCESS_RIGHT_OPEN = "OPEN"; - - public static final String DNET_SUBJECT_TYPOLOGIES = "dnet:subject_classification_typologies"; - public static final String DNET_RESULT_TYPOLOGIES = "dnet:result_typologies"; - public static final String DNET_PUBLICATION_RESOURCE = "dnet:publication_resource"; - public static final String DNET_ACCESS_MODES = "dnet:access_modes"; - public static final String DNET_LANGUAGES = "dnet:languages"; - public static final String DNET_PID_TYPES = "dnet:pid_types"; - public static final String DNET_DATACITE_DATE = "dnet:dataCite_date"; - public static final String DNET_DATACITE_TITLE = "dnet:dataCite_title"; - public static final String DNET_DATA_CITE_RESOURCE = "dnet:dataCite_resource"; - public static final String DNET_PROVENANCE_ACTIONS = "dnet:provenanceActions"; - public static final String DNET_COUNTRY_TYPE = "dnet:countries"; - public static final String DNET_REVIEW_LEVELS = "dnet:review_levels"; - public static final String DNET_PROGRAMMING_LANGUAGES = "dnet:programming_languages"; - public static final String DNET_EXTERNAL_REF_TYPES = "dnet:externalReference_typologies"; - - public static final String SYSIMPORT_CROSSWALK_REPOSITORY = "sysimport:crosswalk:repository"; - public static final String SYSIMPORT_CROSSWALK_ENTITYREGISTRY = "sysimport:crosswalk:entityregistry"; - public static final String SYSIMPORT_ACTIONSET = "sysimport:actionset"; - public static final String SYSIMPORT_ORCID_NO_DOI = "sysimport:actionset:orcidworks-no-doi"; - - public static final String USER_CLAIM = "user:claim"; - public static final String HARVESTED = "Harvested"; - - public static final String PROVENANCE_DEDUP = "sysimport:dedup"; - - public static final Qualifier PROVENANCE_ACTION_SET_QUALIFIER = qualifier( - SYSIMPORT_ACTIONSET, SYSIMPORT_ACTIONSET, DNET_PROVENANCE_ACTIONS, DNET_PROVENANCE_ACTIONS); - - public static final String DATASET_RESULTTYPE_CLASSID = "dataset"; - public static final String PUBLICATION_RESULTTYPE_CLASSID = "publication"; - public static final String SOFTWARE_RESULTTYPE_CLASSID = "software"; - public static final String ORP_RESULTTYPE_CLASSID = "other"; - - public static final String RESULT_RESULT = "resultResult"; - /** - * @deprecated Use {@link ModelConstants#RELATIONSHIP} instead. - */ - @Deprecated - public static final String PUBLICATION_DATASET = "publicationDataset"; - public static final String IS_RELATED_TO = "isRelatedTo"; - public static final String SUPPLEMENT = "supplement"; - public static final String IS_SUPPLEMENT_TO = "isSupplementTo"; - public static final String IS_SUPPLEMENTED_BY = "isSupplementedBy"; - public static final String PART = "part"; - public static final String IS_PART_OF = "isPartOf"; - public static final String HAS_PART = "hasPart"; - public static final String RELATIONSHIP = "relationship"; - public static final String CITATION = "citation"; - public static final String CITES = "cites"; - public static final String IS_CITED_BY = "isCitedBy"; - public static final String REVIEW = "review"; // subreltype - public static final String REVIEWS = "reviews"; - public static final String IS_REVIEWED_BY = "isReviewedBy"; - - public static final String RESULT_PROJECT = "resultProject"; - public static final String OUTCOME = "outcome"; - public static final String IS_PRODUCED_BY = "isProducedBy"; - public static final String PRODUCES = "produces"; - - public static final String DATASOURCE_ORGANIZATION = "datasourceOrganization"; - public static final String PROVISION = "provision"; - public static final String IS_PROVIDED_BY = "isProvidedBy"; - public static final String PROVIDES = "provides"; - - public static final String PROJECT_ORGANIZATION = "projectOrganization"; - public static final String PARTICIPATION = "participation"; - public static final String HAS_PARTICIPANT = "hasParticipant"; - public static final String IS_PARTICIPANT = "isParticipant"; - - public static final String RESULT_ORGANIZATION = "resultOrganization"; - public static final String AFFILIATION = "affiliation"; - public static final String IS_AUTHOR_INSTITUTION_OF = "isAuthorInstitutionOf"; - public static final String HAS_AUTHOR_INSTITUTION = "hasAuthorInstitution"; - - public static final String ORG_ORG_RELTYPE = "organizationOrganization"; - - public static final String DEDUP = "dedup"; - public static final String MERGES = "merges"; - public static final String IS_MERGED_IN = "isMergedIn"; - - public static final String SIMILARITY = "similarity"; - public static final String IS_SIMILAR_TO = "isSimilarTo"; - - public static final String IS_DIFFERENT_FROM = "isDifferentFrom"; - - public static final String UNKNOWN = "UNKNOWN"; - public static final String NOT_AVAILABLE = "not available"; - - public static final Qualifier PUBLICATION_DEFAULT_RESULTTYPE = qualifier( - PUBLICATION_RESULTTYPE_CLASSID, PUBLICATION_RESULTTYPE_CLASSID, - DNET_RESULT_TYPOLOGIES, DNET_RESULT_TYPOLOGIES); - - public static final Qualifier DATASET_DEFAULT_RESULTTYPE = qualifier( - DATASET_RESULTTYPE_CLASSID, DATASET_RESULTTYPE_CLASSID, - DNET_RESULT_TYPOLOGIES, DNET_RESULT_TYPOLOGIES); - - public static final Qualifier SOFTWARE_DEFAULT_RESULTTYPE = qualifier( - SOFTWARE_RESULTTYPE_CLASSID, SOFTWARE_RESULTTYPE_CLASSID, - DNET_RESULT_TYPOLOGIES, DNET_RESULT_TYPOLOGIES); - - public static final Qualifier ORP_DEFAULT_RESULTTYPE = qualifier( - ORP_RESULTTYPE_CLASSID, ORP_RESULTTYPE_CLASSID, - DNET_RESULT_TYPOLOGIES, DNET_RESULT_TYPOLOGIES); - - public static final Qualifier REPOSITORY_PROVENANCE_ACTIONS = qualifier( - SYSIMPORT_CROSSWALK_REPOSITORY, SYSIMPORT_CROSSWALK_REPOSITORY, - DNET_PROVENANCE_ACTIONS, DNET_PROVENANCE_ACTIONS); - - public static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION = qualifier( - SYSIMPORT_CROSSWALK_ENTITYREGISTRY, SYSIMPORT_CROSSWALK_ENTITYREGISTRY, - DNET_PROVENANCE_ACTIONS, DNET_PROVENANCE_ACTIONS); - - public static final String UNKNOWN_REPOSITORY_ORIGINALID = "openaire____::1256f046-bf1f-4afc-8b47-d0b147148b18"; - public static final KeyValue UNKNOWN_REPOSITORY = keyValue( - "10|openaire____::55045bd2a65019fd8e6741a755395c8c", "Unknown Repository"); - - public static final Qualifier UNKNOWN_COUNTRY = qualifier(UNKNOWN, "Unknown", DNET_COUNTRY_TYPE, DNET_COUNTRY_TYPE); - - public static final Qualifier MAIN_TITLE_QUALIFIER = qualifier( - "main title", "main title", DNET_DATACITE_TITLE, DNET_DATACITE_TITLE); - - public static final AccessRight OPEN_ACCESS_RIGHT() { - - final AccessRight result = new AccessRight(); - result.setClassid(ACCESS_RIGHT_OPEN); - result.setClassid(ACCESS_RIGHT_OPEN); - result.setSchemeid(ModelConstants.DNET_ACCESS_MODES); - result.setSchemename(ModelConstants.DNET_ACCESS_MODES); - return result; - } - - private static Qualifier qualifier( - final String classid, - final String classname, - final String schemeid, - final String schemename) { - final Qualifier q = new Qualifier(); - q.setClassid(classid); - q.setClassname(classname); - q.setSchemeid(schemeid); - q.setSchemename(schemename); - return q; - } - - private static KeyValue keyValue(String key, String value) { - KeyValue kv = new KeyValue(); - kv.setKey(key); - kv.setValue(value); - kv.setDataInfo(new DataInfo()); - return kv; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelSupport.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelSupport.java deleted file mode 100644 index 18ce2d967..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelSupport.java +++ /dev/null @@ -1,512 +0,0 @@ - -package eu.dnetlib.dhp.schema.common; - -import static com.google.common.base.Preconditions.checkArgument; - -import java.nio.charset.StandardCharsets; -import java.security.MessageDigest; -import java.security.NoSuchAlgorithmException; -import java.text.ParseException; -import java.time.Instant; -import java.time.format.DateTimeFormatter; -import java.util.Date; -import java.util.Map; -import java.util.Objects; -import java.util.Optional; -import java.util.function.Function; - -import org.apache.commons.codec.binary.Hex; -import org.apache.commons.lang3.StringUtils; - -import com.google.common.collect.Maps; - -import eu.dnetlib.dhp.schema.oaf.*; - -/** Oaf model utility methods. */ -public class ModelSupport { - - /** Defines the mapping between the actual entity type and the main entity type */ - private static Map entityMapping = Maps.newHashMap(); - - static { - entityMapping.put(EntityType.publication, MainEntityType.result); - entityMapping.put(EntityType.dataset, MainEntityType.result); - entityMapping.put(EntityType.otherresearchproduct, MainEntityType.result); - entityMapping.put(EntityType.software, MainEntityType.result); - entityMapping.put(EntityType.datasource, MainEntityType.datasource); - entityMapping.put(EntityType.organization, MainEntityType.organization); - entityMapping.put(EntityType.project, MainEntityType.project); - } - - /** - * Defines the mapping between the actual entity types and the relative classes implementing them - */ - public static final Map entityTypes = Maps.newHashMap(); - - static { - entityTypes.put(EntityType.datasource, Datasource.class); - entityTypes.put(EntityType.organization, Organization.class); - entityTypes.put(EntityType.project, Project.class); - entityTypes.put(EntityType.dataset, Dataset.class); - entityTypes.put(EntityType.otherresearchproduct, OtherResearchProduct.class); - entityTypes.put(EntityType.software, Software.class); - entityTypes.put(EntityType.publication, Publication.class); - } - - public static final Map oafTypes = Maps.newHashMap(); - - static { - oafTypes.put("datasource", Datasource.class); - oafTypes.put("organization", Organization.class); - oafTypes.put("project", Project.class); - oafTypes.put("dataset", Dataset.class); - oafTypes.put("otherresearchproduct", OtherResearchProduct.class); - oafTypes.put("software", Software.class); - oafTypes.put("publication", Publication.class); - oafTypes.put("relation", Relation.class); - } - - public static final Map idPrefixMap = Maps.newHashMap(); - - static { - idPrefixMap.put(Datasource.class, "10"); - idPrefixMap.put(Organization.class, "20"); - idPrefixMap.put(Project.class, "40"); - idPrefixMap.put(Dataset.class, "50"); - idPrefixMap.put(OtherResearchProduct.class, "50"); - idPrefixMap.put(Software.class, "50"); - idPrefixMap.put(Publication.class, "50"); - } - - public static final Map entityIdPrefix = Maps.newHashMap(); - - static { - entityIdPrefix.put("datasource", "10"); - entityIdPrefix.put("organization", "20"); - entityIdPrefix.put("project", "40"); - entityIdPrefix.put("result", "50"); - } - - public static final Map idPrefixEntity = Maps.newHashMap(); - - static { - idPrefixEntity.put("10", "datasource"); - idPrefixEntity.put("20", "organization"); - idPrefixEntity.put("40", "project"); - idPrefixEntity.put("50", "result"); - } - - public static final Map relationInverseMap = Maps.newHashMap(); - - static { - relationInverseMap - .put( - "personResult_authorship_isAuthorOf", new RelationInverse() - .setRelation("isAuthorOf") - .setInverse("hasAuthor") - .setRelType("personResult") - .setSubReltype("authorship")); - relationInverseMap - .put( - "personResult_authorship_hasAuthor", new RelationInverse() - .setInverse("isAuthorOf") - .setRelation("hasAuthor") - .setRelType("personResult") - .setSubReltype("authorship")); - relationInverseMap - .put( - "projectOrganization_participation_isParticipant", new RelationInverse() - .setRelation(ModelConstants.IS_PARTICIPANT) - .setInverse(ModelConstants.HAS_PARTICIPANT) - .setRelType(ModelConstants.PROJECT_ORGANIZATION) - .setSubReltype(ModelConstants.PARTICIPATION)); - relationInverseMap - .put( - "projectOrganization_participation_hasParticipant", new RelationInverse() - .setInverse(ModelConstants.IS_PARTICIPANT) - .setRelation(ModelConstants.HAS_PARTICIPANT) - .setRelType(ModelConstants.PROJECT_ORGANIZATION) - .setSubReltype(ModelConstants.PARTICIPATION)); - relationInverseMap - .put( - "resultOrganization_affiliation_hasAuthorInstitution", new RelationInverse() - .setRelation(ModelConstants.HAS_AUTHOR_INSTITUTION) - .setInverse(ModelConstants.IS_AUTHOR_INSTITUTION_OF) - .setRelType(ModelConstants.RESULT_ORGANIZATION) - .setSubReltype(ModelConstants.AFFILIATION)); - relationInverseMap - .put( - "resultOrganization_affiliation_isAuthorInstitutionOf", new RelationInverse() - .setInverse(ModelConstants.HAS_AUTHOR_INSTITUTION) - .setRelation(ModelConstants.IS_AUTHOR_INSTITUTION_OF) - .setRelType(ModelConstants.RESULT_ORGANIZATION) - .setSubReltype(ModelConstants.AFFILIATION)); - relationInverseMap - .put( - "organizationOrganization_dedup_merges", new RelationInverse() - .setRelation(ModelConstants.MERGES) - .setInverse(ModelConstants.IS_MERGED_IN) - .setRelType(ModelConstants.ORG_ORG_RELTYPE) - .setSubReltype(ModelConstants.DEDUP)); - relationInverseMap - .put( - "organizationOrganization_dedup_isMergedIn", new RelationInverse() - .setInverse(ModelConstants.MERGES) - .setRelation(ModelConstants.IS_MERGED_IN) - .setRelType(ModelConstants.ORG_ORG_RELTYPE) - .setSubReltype(ModelConstants.DEDUP)); - relationInverseMap - .put( - "organizationOrganization_dedupSimilarity_isSimilarTo", new RelationInverse() - .setInverse(ModelConstants.IS_SIMILAR_TO) - .setRelation(ModelConstants.IS_SIMILAR_TO) - .setRelType(ModelConstants.ORG_ORG_RELTYPE) - .setSubReltype(ModelConstants.DEDUP)); - - relationInverseMap - .put( - "resultProject_outcome_isProducedBy", new RelationInverse() - .setRelation(ModelConstants.IS_PRODUCED_BY) - .setInverse(ModelConstants.PRODUCES) - .setRelType(ModelConstants.RESULT_PROJECT) - .setSubReltype(ModelConstants.OUTCOME)); - relationInverseMap - .put( - "resultProject_outcome_produces", new RelationInverse() - .setInverse(ModelConstants.IS_PRODUCED_BY) - .setRelation(ModelConstants.PRODUCES) - .setRelType(ModelConstants.RESULT_PROJECT) - .setSubReltype(ModelConstants.OUTCOME)); - relationInverseMap - .put( - "projectPerson_contactPerson_isContact", new RelationInverse() - .setRelation("isContact") - .setInverse("hasContact") - .setRelType("projectPerson") - .setSubReltype("contactPerson")); - relationInverseMap - .put( - "projectPerson_contactPerson_hasContact", new RelationInverse() - .setInverse("isContact") - .setRelation("hasContact") - .setRelType("personPerson") - .setSubReltype("coAuthorship")); - relationInverseMap - .put( - "personPerson_coAuthorship_isCoauthorOf", new RelationInverse() - .setInverse("isCoAuthorOf") - .setRelation("isCoAuthorOf") - .setRelType("personPerson") - .setSubReltype("coAuthorship")); - relationInverseMap - .put( - "personPerson_dedup_merges", new RelationInverse() - .setInverse(ModelConstants.IS_MERGED_IN) - .setRelation(ModelConstants.MERGES) - .setRelType("personPerson") - .setSubReltype(ModelConstants.DEDUP)); - relationInverseMap - .put( - "personPerson_dedup_isMergedIn", new RelationInverse() - .setInverse(ModelConstants.MERGES) - .setRelation(ModelConstants.IS_MERGED_IN) - .setRelType("personPerson") - .setSubReltype(ModelConstants.DEDUP)); - relationInverseMap - .put( - "personPerson_dedupSimilarity_isSimilarTo", new RelationInverse() - .setInverse(ModelConstants.IS_SIMILAR_TO) - .setRelation(ModelConstants.IS_SIMILAR_TO) - .setRelType("personPerson") - .setSubReltype(ModelConstants.DEDUP)); - relationInverseMap - .put( - "datasourceOrganization_provision_isProvidedBy", new RelationInverse() - .setInverse(ModelConstants.PROVIDES) - .setRelation(ModelConstants.IS_PROVIDED_BY) - .setRelType(ModelConstants.DATASOURCE_ORGANIZATION) - .setSubReltype(ModelConstants.PROVISION)); - relationInverseMap - .put( - "datasourceOrganization_provision_provides", new RelationInverse() - .setInverse(ModelConstants.IS_PROVIDED_BY) - .setRelation(ModelConstants.PROVIDES) - .setRelType(ModelConstants.DATASOURCE_ORGANIZATION) - .setSubReltype(ModelConstants.PROVISION)); - relationInverseMap - .put( - "resultResult_similarity_hasAmongTopNSimilarDocuments", new RelationInverse() - .setInverse("isAmongTopNSimilarDocuments") - .setRelation("hasAmongTopNSimilarDocuments") - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.SIMILARITY)); - relationInverseMap - .put( - "resultResult_similarity_isAmongTopNSimilarDocuments", new RelationInverse() - .setInverse("hasAmongTopNSimilarDocuments") - .setRelation("isAmongTopNSimilarDocuments") - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.SIMILARITY)); - relationInverseMap - .put( - "resultResult_relationship_isRelatedTo", new RelationInverse() - .setInverse(ModelConstants.IS_RELATED_TO) - .setRelation(ModelConstants.IS_RELATED_TO) - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.RELATIONSHIP)); - relationInverseMap - .put( - "resultResult_supplement_isSupplementTo", new RelationInverse() - .setInverse(ModelConstants.IS_SUPPLEMENTED_BY) - .setRelation(ModelConstants.IS_SUPPLEMENT_TO) - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.SUPPLEMENT)); - relationInverseMap - .put( - "resultResult_supplement_isSupplementedBy", new RelationInverse() - .setInverse(ModelConstants.IS_SUPPLEMENT_TO) - .setRelation(ModelConstants.IS_SUPPLEMENTED_BY) - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.SUPPLEMENT)); - relationInverseMap - .put( - "resultResult_part_isPartOf", new RelationInverse() - .setInverse(ModelConstants.HAS_PART) - .setRelation(ModelConstants.IS_PART_OF) - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.PART)); - relationInverseMap - .put( - "resultResult_part_hasPart", new RelationInverse() - .setInverse(ModelConstants.IS_PART_OF) - .setRelation(ModelConstants.HAS_PART) - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.PART)); - relationInverseMap - .put( - "resultResult_dedup_merges", new RelationInverse() - .setInverse(ModelConstants.IS_MERGED_IN) - .setRelation(ModelConstants.MERGES) - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.DEDUP)); - relationInverseMap - .put( - "resultResult_dedup_isMergedIn", new RelationInverse() - .setInverse(ModelConstants.MERGES) - .setRelation(ModelConstants.IS_MERGED_IN) - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.DEDUP)); - relationInverseMap - .put( - "resultResult_dedupSimilarity_isSimilarTo", new RelationInverse() - .setInverse(ModelConstants.IS_SIMILAR_TO) - .setRelation(ModelConstants.IS_SIMILAR_TO) - .setRelType(ModelConstants.RESULT_RESULT) - .setSubReltype(ModelConstants.DEDUP)); - - } - - private static final String schemeTemplate = "dnet:%s_%s_relations"; - - private ModelSupport() { - } - - public static String getIdPrefix(Class clazz) { - return idPrefixMap.get(clazz); - } - - /** - * Checks subclass-superclass relationship. - * - * @param subClazzObject Subclass object instance - * @param superClazzObject Superclass object instance - * @param Subclass type - * @param Superclass type - * @return True if X is a subclass of Y - */ - public static Boolean isSubClass( - X subClazzObject, Y superClazzObject) { - return isSubClass(subClazzObject.getClass(), superClazzObject.getClass()); - } - - /** - * Checks subclass-superclass relationship. - * - * @param subClazzObject Subclass object instance - * @param superClazz Superclass class - * @param Subclass type - * @param Superclass type - * @return True if X is a subclass of Y - */ - public static Boolean isSubClass( - X subClazzObject, Class superClazz) { - return isSubClass(subClazzObject.getClass(), superClazz); - } - - /** - * Checks subclass-superclass relationship. - * - * @param subClazz Subclass class - * @param superClazz Superclass class - * @param Subclass type - * @param Superclass type - * @return True if X is a subclass of Y - */ - public static Boolean isSubClass( - Class subClazz, Class superClazz) { - return superClazz.isAssignableFrom(subClazz); - } - - /** - * Lists all the OAF model classes - * - * @param - * @return - */ - public static Class[] getOafModelClasses() { - return new Class[] { - Author.class, - Context.class, - Country.class, - DataInfo.class, - Dataset.class, - Datasource.class, - ExternalReference.class, - ExtraInfo.class, - Field.class, - GeoLocation.class, - Instance.class, - AccessRight.class, - OpenAccessRoute.class, - Journal.class, - KeyValue.class, - Oaf.class, - OafEntity.class, - OAIProvenance.class, - Organization.class, - OriginDescription.class, - OtherResearchProduct.class, - Project.class, - Publication.class, - Qualifier.class, - Relation.class, - Result.class, - Software.class, - StructuredProperty.class - }; - } - - public static String getMainType(final EntityType type) { - return entityMapping.get(type).name(); - } - - public static boolean isResult(EntityType type) { - return MainEntityType.result.name().equals(getMainType(type)); - } - - public static String getScheme(final String sourceType, final String targetType) { - return String - .format( - schemeTemplate, - entityMapping.get(EntityType.valueOf(sourceType)).name(), - entityMapping.get(EntityType.valueOf(targetType)).name()); - } - - public static String tableIdentifier(String dbName, String tableName) { - - checkArgument(StringUtils.isNotBlank(dbName), "DB name cannot be empty"); - checkArgument(StringUtils.isNotBlank(tableName), "table name cannot be empty"); - - return String.format("%s.%s", dbName, tableName); - } - - public static String tableIdentifier(String dbName, Class clazz) { - - checkArgument(Objects.nonNull(clazz), "clazz is needed to derive the table name, thus cannot be null"); - - return tableIdentifier(dbName, clazz.getSimpleName().toLowerCase()); - } - - public static Function idFn() { - return x -> { - if (isSubClass(x, Relation.class)) { - return idFnForRelation(x); - } - return idFnForOafEntity(x); - }; - } - - private static String idFnForRelation(T t) { - Relation r = (Relation) t; - return Optional - .ofNullable(r.getSource()) - .map( - source -> Optional - .ofNullable(r.getTarget()) - .map( - target -> Optional - .ofNullable(r.getRelType()) - .map( - relType -> Optional - .ofNullable(r.getSubRelType()) - .map( - subRelType -> Optional - .ofNullable(r.getRelClass()) - .map( - relClass -> String - .join( - source, - target, - relType, - subRelType, - relClass)) - .orElse( - String - .join( - source, - target, - relType, - subRelType))) - .orElse(String.join(source, target, relType))) - .orElse(String.join(source, target))) - .orElse(source)) - .orElse(null); - } - - private static String idFnForOafEntity(T t) { - return ((OafEntity) t).getId(); - } - - public static String md5(final String s) { - try { - final MessageDigest md = MessageDigest.getInstance("MD5"); - md.update(s.getBytes(StandardCharsets.UTF_8)); - return new String(Hex.encodeHex(md.digest())); - } catch (final NoSuchAlgorithmException e) { - throw new IllegalStateException(e); - } - } - - public static String generateIdentifier(final String originalId, final String nsPrefix) { - return String.format("%s::%s", nsPrefix, md5(originalId)); - } - - public static String oldest(String dateA, String dateB) throws ParseException { - - if (StringUtils.isBlank(dateA)) { - return dateB; - } - if (StringUtils.isBlank(dateB)) { - return dateA; - } - if (StringUtils.isNotBlank(dateA) && StringUtils.isNotBlank(dateB)) { - - final Date a = Date.from(Instant.from(DateTimeFormatter.ISO_INSTANT.parse(dateA))); - final Date b = Date.from(Instant.from(DateTimeFormatter.ISO_INSTANT.parse(dateB))); - - return a.before(b) ? dateA : dateB; - } else { - return null; - } - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/RelationInverse.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/RelationInverse.java deleted file mode 100644 index 4757c637e..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/RelationInverse.java +++ /dev/null @@ -1,46 +0,0 @@ - -package eu.dnetlib.dhp.schema.common; - -public class RelationInverse { - private String relation; - private String inverse; - private String relType; - private String subReltype; - - public String getRelType() { - return relType; - } - - public RelationInverse setRelType(String relType) { - this.relType = relType; - return this; - } - - public String getSubReltype() { - return subReltype; - } - - public RelationInverse setSubReltype(String subReltype) { - this.subReltype = subReltype; - return this; - } - - public String getRelation() { - return relation; - } - - public RelationInverse setRelation(String relation) { - this.relation = relation; - return this; - } - - public String getInverse() { - return inverse; - } - - public RelationInverse setInverse(String inverse) { - this.inverse = inverse; - return this; - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/APC.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/APC.java deleted file mode 100644 index 7f5dcb397..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/APC.java +++ /dev/null @@ -1,29 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -/** - * Used to refer to the Article Processing Charge information. Not dumped in this release. It contains two parameters: - - * currency of type String to store the currency of the APC - amount of type String to stores the charged amount - */ -public class APC implements Serializable { - private String currency; - private String amount; - - public String getCurrency() { - return currency; - } - - public void setCurrency(String currency) { - this.currency = currency; - } - - public String getAmount() { - return amount; - } - - public void setAmount(String amount) { - this.amount = amount; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/AccessRight.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/AccessRight.java deleted file mode 100644 index f28c544f6..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/AccessRight.java +++ /dev/null @@ -1,31 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -/** - * AccessRight. Used to represent the result access rights. It extends the eu.dnet.lib.dhp.schema.dump.oaf.Qualifier - * element with a parameter scheme of type String to store the scheme. Values for this element are found against the - * COAR access right scheme. The classid of the element accessright in eu.dnetlib.dhp.schema.oaf.Result is used to get - * the COAR corresponding code whose value will be used to set the code parameter. The COAR label corresponding to the - * COAR code will be used to set the label parameter. The scheme value will always be the one referring to the COAR - * access right scheme - */ -public class AccessRight extends Qualifier { - - private String scheme; - - public String getScheme() { - return scheme; - } - - public void setScheme(String scheme) { - this.scheme = scheme; - } - - public static AccessRight newInstance(String code, String label, String scheme) { - AccessRight ar = new AccessRight(); - ar.setCode(code); - ar.setLabel(label); - ar.setScheme(scheme); - return ar; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Author.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Author.java deleted file mode 100644 index 34920bcf7..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Author.java +++ /dev/null @@ -1,73 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; -import java.util.List; - -/** - * Used to represent the generic author of the result. It has six parameters: - name of type String to store the given - * name of the author. The value for this parameter corresponds to eu.dnetlib.dhp.schema.oaf.Author name - surname of - * type String to store the family name of the author. The value for this parameter corresponds to - * eu.dnetlib.dhp.schema.oaf.Author surname - fullname of type String to store the fullname of the author. The value for - * this parameter corresponds to eu.dnetlib.dhp.schema.oaf.Author fullname - rank of type Integer to store the rank on - * the author in the result's authors list. The value for this parameter corresponds to eu.dnetlib.dhp.schema.oaf.Author - * rank - pid of type eu.dnetlib.dhp.schema.dump.oaf.Pid to store the persistent identifier for the author. For the - * moment only ORCID identifiers will be dumped. - The id element is instantiated by using the following values in the - * eu.dnetlib.dhp.schema.oaf.Result pid: * Qualifier.classid for scheme * value for value - The provenance element is - * instantiated only if the dataInfo is set for the pid in the result to be dumped. The provenance element is - * instantiated by using the following values in the eu.dnetlib.dhp.schema.oaf.Result pid: * - * dataInfo.provenanceaction.classname for provenance * dataInfo.trust for trust - */ -public class Author implements Serializable { - - private String fullname; - - private String name; - - private String surname; - - private Integer rank; - - private Pid pid; - - public String getFullname() { - return fullname; - } - - public void setFullname(String fullname) { - this.fullname = fullname; - } - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public String getSurname() { - return surname; - } - - public void setSurname(String surname) { - this.surname = surname; - } - - public Integer getRank() { - return rank; - } - - public void setRank(Integer rank) { - this.rank = rank; - } - - public Pid getPid() { - return pid; - } - - public void setPid(Pid pid) { - this.pid = pid; - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Container.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Container.java deleted file mode 100644 index 8699528ca..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Container.java +++ /dev/null @@ -1,136 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; -import java.util.Objects; - -/** - * To store information about the conference or journal where the result has been presented or published. It contains - * eleven parameters: - name of type String to store the name of the journal or conference. It corresponds to the - * parameter name of eu.dnetlib.dhp.schema.oaf.Journal - issnPrinted ot type String to store the journal printed issn. - * It corresponds to the parameter issnPrinted of eu.dnetlib.dhp.schema.oaf.Journal - issnOnline of type String to store - * the journal online issn. It corresponds to the parameter issnOnline of eu.dnetlib.dhp.schema.oaf.Journal - - * issnLinking of type String to store the journal linking issn. It corresponds to the parameter issnLinking of - * eu.dnetlib.dhp.schema.oaf.Journal - ep of type String to store the end page. It corresponds to the parameter ep of - * eu.dnetlib.dhp.schema.oaf.Journal - iss of type String to store the journal issue. It corresponds to the parameter - * iss of eu.dnetlib.dhp.schema.oaf.Journal - sp of type String to store the start page. It corresponds to the parameter - * sp of eu.dnetlib.dhp.schema.oaf.Journal - vol of type String to store the Volume. It corresponds to the parameter vol - * of eu.dnetlib.dhp.schema.oaf.Journal - edition of type String to store the edition of the journal or conference - * proceeding. It corresponds to the parameter edition of eu.dnetlib.dhp.schema.oaf.Journal - conferenceplace of type - * String to store the place of the conference. It corresponds to the parameter conferenceplace of - * eu.dnetlib.dhp.schema.oaf.Journal - conferencedate of type String to store the date of the conference. It corresponds - * to the parameter conferencedate of eu.dnetlib.dhp.schema.oaf.Journal - */ -public class Container implements Serializable { - - private String name; - - private String issnPrinted; - - private String issnOnline; - - private String issnLinking; - - private String ep; - - private String iss; - - private String sp; - - private String vol; - - private String edition; - - private String conferenceplace; - - private String conferencedate; - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public String getIssnPrinted() { - return issnPrinted; - } - - public void setIssnPrinted(String issnPrinted) { - this.issnPrinted = issnPrinted; - } - - public String getIssnOnline() { - return issnOnline; - } - - public void setIssnOnline(String issnOnline) { - this.issnOnline = issnOnline; - } - - public String getIssnLinking() { - return issnLinking; - } - - public void setIssnLinking(String issnLinking) { - this.issnLinking = issnLinking; - } - - public String getEp() { - return ep; - } - - public void setEp(String ep) { - this.ep = ep; - } - - public String getIss() { - return iss; - } - - public void setIss(String iss) { - this.iss = iss; - } - - public String getSp() { - return sp; - } - - public void setSp(String sp) { - this.sp = sp; - } - - public String getVol() { - return vol; - } - - public void setVol(String vol) { - this.vol = vol; - } - - public String getEdition() { - return edition; - } - - public void setEdition(String edition) { - this.edition = edition; - } - - public String getConferenceplace() { - return conferenceplace; - } - - public void setConferenceplace(String conferenceplace) { - this.conferenceplace = conferenceplace; - } - - public String getConferencedate() { - return conferencedate; - } - - public void setConferencedate(String conferencedate) { - this.conferencedate = conferencedate; - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/ControlledField.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/ControlledField.java deleted file mode 100644 index cad7b8b5c..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/ControlledField.java +++ /dev/null @@ -1,38 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -/** - * To represent the information described by a scheme and a value in that scheme (i.e. pid). It has two parameters: - - * scheme of type String to store the scheme - value of type String to store the value in that scheme - */ -public class ControlledField implements Serializable { - private String scheme; - private String value; - - public String getScheme() { - return scheme; - } - - public void setScheme(String scheme) { - this.scheme = scheme; - } - - public String getValue() { - return value; - } - - public void setValue(String value) { - this.value = value; - } - - public static ControlledField newInstance(String scheme, String value) { - ControlledField cf = new ControlledField(); - - cf.setScheme(scheme); - cf.setValue(value); - - return cf; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Country.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Country.java deleted file mode 100644 index 3ab4d90fe..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Country.java +++ /dev/null @@ -1,37 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -/** - * Represents the country associated to this result. It extends eu.dnetlib.dhp.schema.dump.oaf.Qualifier with a - * provenance parameter of type eu.dnetlib.dhp.schema.dumo.oaf.Provenance. The country in not mapped if its value in the - * result reprensented in the internal format is Unknown. The value for this element correspond to: - code corresponds - * to the classid of eu.dnetlib.dhp.schema.oaf.Country - label corresponds to the classname of - * eu.dnetlib.dhp.schema.oaf.Country - provenance set only if the dataInfo associated to the Country of the result to be - * dumped is not null. In this case : - provenance corresponds to dataInfo.provenanceaction.classid (to be modified with - * datainfo.provenanceaction.classname) - trust corresponds to dataInfo.trust - */ -public class Country extends Qualifier { - - private Provenance provenance; - - public Provenance getProvenance() { - return provenance; - } - - public void setProvenance(Provenance provenance) { - this.provenance = provenance; - } - - public static Country newInstance(String code, String label, Provenance provenance) { - Country c = new Country(); - c.setProvenance(provenance); - c.setCode(code); - c.setLabel(label); - return c; - } - - public static Country newInstance(String code, String label, String provenance, String trust) { - return newInstance(code, label, Provenance.newInstance(provenance, trust)); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Funder.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Funder.java deleted file mode 100644 index 16cab22cc..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Funder.java +++ /dev/null @@ -1,36 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -public class Funder implements Serializable { - private String shortName; - - private String name; - - private String jurisdiction; - - public String getJurisdiction() { - return jurisdiction; - } - - public void setJurisdiction(String jurisdiction) { - this.jurisdiction = jurisdiction; - } - - public String getShortName() { - return shortName; - } - - public void setShortName(String shortName) { - this.shortName = shortName; - } - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/GeoLocation.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/GeoLocation.java deleted file mode 100644 index 6bd891bbd..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/GeoLocation.java +++ /dev/null @@ -1,53 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -import org.apache.commons.lang3.StringUtils; - -import com.fasterxml.jackson.annotation.JsonIgnore; - -/** - * Represents the geolocation information. It has three parameters: - point of type String to store the point - * information. It corresponds to eu.dnetlib.dhp.schema.oaf.GeoLocation point - box ot type String to store the box - * information. It corresponds to eu.dnetlib.dhp.schema.oaf.GeoLocation box - place of type String to store the place - * information. It corresponds to eu.dnetlib.dhp.schema.oaf.GeoLocation place - */ -public class GeoLocation implements Serializable { - - private String point; - - private String box; - - private String place; - - public String getPoint() { - return point; - } - - public void setPoint(String point) { - this.point = point; - } - - public String getBox() { - return box; - } - - public void setBox(String box) { - this.box = box; - } - - public String getPlace() { - return place; - } - - public void setPlace(String place) { - this.place = place; - } - - @JsonIgnore - public boolean isBlank() { - return StringUtils.isBlank(point) && StringUtils.isBlank(box) && StringUtils.isBlank(place); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Instance.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Instance.java deleted file mode 100644 index edc6f28f5..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Instance.java +++ /dev/null @@ -1,81 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; -import java.util.List; - -/** - * Represents the manifestations (i.e. different versions) of the result. For example: the pre-print and the published - * versions are two manifestations of the same research result. It has the following parameters: - license of type - * String to store the license applied to the instance. It corresponds to the value of the licence in the instance to be - * dumped - accessright of type eu.dnetlib.dhp.schema.dump.oaf.AccessRight to store the accessright of the instance. - - * type of type String to store the type of the instance as defined in the corresponding dnet vocabulary - * (dnet:pubication_resource). It corresponds to the instancetype.classname of the instance to be mapped - url of type - * List list of locations where the instance is accessible. It corresponds to url of the instance to be dumped - - * publicationdate of type String to store the publication date of the instance ;// dateofacceptance; - refereed of type - * String to store information abour tthe review status of the instance. Possible values are 'Unknown', - * 'nonPeerReviewed', 'peerReviewed'. It corresponds to refereed.classname of the instance to be dumped - */ -public class Instance implements Serializable { - - private String license; - - private AccessRight accessright; - - private String type; - - private List url; - - private String publicationdate;// dateofacceptance; - - private String refereed; // peer-review status - - public String getLicense() { - return license; - } - - public void setLicense(String license) { - this.license = license; - } - - public AccessRight getAccessright() { - return accessright; - } - - public void setAccessright(AccessRight accessright) { - this.accessright = accessright; - } - - public String getType() { - return type; - } - - public void setType(String type) { - this.type = type; - } - - public List getUrl() { - return url; - } - - public void setUrl(List url) { - this.url = url; - } - - public String getPublicationdate() { - return publicationdate; - } - - public void setPublicationdate(String publicationdate) { - this.publicationdate = publicationdate; - } - - public String getRefereed() { - return refereed; - } - - public void setRefereed(String refereed) { - this.refereed = refereed; - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/KeyValue.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/KeyValue.java deleted file mode 100644 index 849aa4d3c..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/KeyValue.java +++ /dev/null @@ -1,48 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -import org.apache.commons.lang3.StringUtils; - -import com.fasterxml.jackson.annotation.JsonIgnore; - -/** - * To represent the information described by a key and a value. It has two parameters: - key to store the key (generally - * the OpenAIRE id for some entity) - value to store the value (generally the OpenAIRE name for the key) - */ -public class KeyValue implements Serializable { - - private String key; - - private String value; - - public String getKey() { - return key; - } - - public void setKey(String key) { - this.key = key; - } - - public String getValue() { - return value; - } - - public void setValue(String value) { - this.value = value; - } - - public static KeyValue newInstance(String key, String value) { - KeyValue inst = new KeyValue(); - inst.key = key; - inst.value = value; - return inst; - } - - @JsonIgnore - public boolean isBlank() { - return StringUtils.isBlank(key) && StringUtils.isBlank(value); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Pid.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Pid.java deleted file mode 100644 index 786ddb1d7..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Pid.java +++ /dev/null @@ -1,45 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -/** - * To represent the generic persistent identifier. It has two parameters: - id of type - * eu.dnetlib.dhp.schema.dump.oaf.ControlledField to store the scheme and value of the Persistent Identifier. - - * provenance of type eu.dnetlib.dhp.schema.dump.oaf.Provenance to store the provenance and trust of the information - */ -public class Pid implements Serializable { - private ControlledField id; - private Provenance provenance; - - public ControlledField getId() { - return id; - } - - public void setId(ControlledField pid) { - this.id = pid; - } - - public Provenance getProvenance() { - return provenance; - } - - public void setProvenance(Provenance provenance) { - this.provenance = provenance; - } - - public static Pid newInstance(ControlledField pid, Provenance provenance) { - Pid p = new Pid(); - p.id = pid; - p.provenance = provenance; - - return p; - } - - public static Pid newInstance(ControlledField pid) { - Pid p = new Pid(); - p.id = pid; - - return p; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Project.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Project.java deleted file mode 100644 index 00cd7a0fb..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Project.java +++ /dev/null @@ -1,51 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -/** - * This class to store the common information about the project that will be dumped for community and for the whole - * graph - private String id to store the id of the project (OpenAIRE id) - private String code to store the grant - * agreement of the project - private String acronym to store the acronym of the project - private String title to store - * the tile of the project - */ -public class Project implements Serializable { - protected String id;// OpenAIRE id - protected String code; - - protected String acronym; - - protected String title; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public String getCode() { - return code; - } - - public void setCode(String code) { - this.code = code; - } - - public String getAcronym() { - return acronym; - } - - public void setAcronym(String acronym) { - this.acronym = acronym; - } - - public String getTitle() { - return title; - } - - public void setTitle(String title) { - this.title = title; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Provenance.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Provenance.java deleted file mode 100644 index 28fb3aaa6..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Provenance.java +++ /dev/null @@ -1,41 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -/** - * Indicates the process that produced (or provided) the information, and the trust associated to the information. It - * has two parameters: - provenance of type String to store the provenance of the information, - trust of type String to - * store the trust associated to the information - */ -public class Provenance implements Serializable { - private String provenance; - private String trust; - - public String getProvenance() { - return provenance; - } - - public void setProvenance(String provenance) { - this.provenance = provenance; - } - - public String getTrust() { - return trust; - } - - public void setTrust(String trust) { - this.trust = trust; - } - - public static Provenance newInstance(String provenance, String trust) { - Provenance p = new Provenance(); - p.provenance = provenance; - p.trust = trust; - return p; - } - - public String toString() { - return provenance + trust; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Qualifier.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Qualifier.java deleted file mode 100644 index 348c22b31..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Qualifier.java +++ /dev/null @@ -1,42 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -import org.apache.commons.lang3.StringUtils; - -import com.fasterxml.jackson.annotation.JsonIgnore; - -/** - * To represent the information described by a code and a value It has two parameters: - code to store the code - * (generally the classid of the eu.dnetlib.dhp.schema.oaf.Qualifier element) - label to store the label (generally the - * classname of the eu.dnetlib.dhp.schema.oaf.Qualifier element - */ -public class Qualifier implements Serializable { - - private String code; // the classid in the Qualifier - private String label; // the classname in the Qualifier - - public String getCode() { - return code; - } - - public void setCode(String code) { - this.code = code; - } - - public String getLabel() { - return label; - } - - public void setLabel(String label) { - this.label = label; - } - - public static Qualifier newInstance(String code, String value) { - Qualifier qualifier = new Qualifier(); - qualifier.setCode(code); - qualifier.setLabel(value); - return qualifier; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Result.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Result.java deleted file mode 100644 index 88ab2c334..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Result.java +++ /dev/null @@ -1,379 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; -import java.util.List; - -import eu.dnetlib.dhp.schema.dump.oaf.community.Project; - -/** - * To represent the dumped result. It will be extended in the dump for Research Communities - Research - * Initiative/Infrastructures. It has the following parameters: - author of type - * List to describe the authors of a result. For each author in the result - * represented in the internal model one author in the esternal model is produced. - type of type String to represent - * the category of the result. Possible values are publication, dataset, software, other. It corresponds to - * resulttype.classname of the dumped result - language of type eu.dnetlib.dhp.schema.dump.oaf.Qualifier to store - * information about the language of the result. It is dumped as - code corresponds to language.classid - value - * corresponds to language.classname - country of type List to store the country - * list to which the result is associated. For each country in the result respresented in the internal model one country - * in the external model is produces - subjects of type List to store the subjects for - * the result. For each subject in the result represented in the internal model one subject in the external model is - * produced - maintitle of type String to store the main title of the result. It corresponds to the value of the first - * title in the resul to be dumped having classid equals to "main title" - subtitle of type String to store the subtitle - * of the result. It corresponds to the value of the first title in the resul to be dumped having classid equals to - * "subtitle" - description of type List to store the description of the result. It corresponds to the list of - * description.value in the result represented in the internal model - publicationdate of type String to store the - * pubblication date. It corresponds to dateofacceptance.value in the result represented in the internal model - - * publisher of type String to store information about the publisher. It corresponds to publisher.value of the result - * represented in the intrenal model - embargoenddate of type String to store the embargo end date. It corresponds to - * embargoenddate.value of the result represented in the internal model - source of type List See definition of - * Dublin Core field dc:source. It corresponds to the list of source.value in the result represented in the internal - * model - format of type List It corresponds to the list of format.value in the result represented in the - * internal model - contributor of type List to represent contributors for this result. It corresponds to the - * list of contributor.value in the result represented in the internal model - coverage of type String. It corresponds - * to the list of coverage.value in the result represented in the internal model - bestaccessright of type - * eu.dnetlib.dhp.schema.dump.oaf.AccessRight to store informatin about the openest access right associated to the - * manifestations of this research results. It corresponds to the same parameter in the result represented in the - * internal model - container of type eu.dnetlib.dhp.schema/dump.oaf.Container (only for result of type publication). It - * corresponds to the parameter journal of the result represented in the internal model - documentationUrl of type - * List (only for results of type software) to store the URLs to the software documentation. It corresponds to - * the list of documentationUrl.value of the result represented in the internal model - codeRepositoryUrl of type String - * (only for results of type software) to store the URL to the repository with the source code. It corresponds to - * codeRepositoryUrl.value of the result represented in the internal model - programmingLanguage of type String (only - * for results of type software) to store the programming language. It corresponds to programmingLanguaga.classid of the - * result represented in the internal model - contactperson of type List (only for results of type other) to - * store the contact person for this result. It corresponds to the list of contactperson.value of the result represented - * in the internal model - contactgroup of type List (only for results of type other) to store the information - * for the contact group. It corresponds to the list of contactgroup.value of the result represented in the internal - * model - tool of type List (only fro results of type other) to store information about tool useful for the - * interpretation and/or re-used of the research product. It corresponds to the list of tool.value in the result - * represented in the internal modelt - size of type String (only for results of type dataset) to store the size of the - * dataset. It corresponds to size.value in the result represented in the internal model - version of type String (only - * for results of type dataset) to store the version. It corresponds to version.value of the result represented in the - * internal model - geolocation fo type List (only for results of type - * dataset) to store geolocation information. For each geolocation element in the result represented in the internal - * model a GeoLocation in the external model il produced - id of type String to store the OpenAIRE id of the result. It - * corresponds to the id of the result represented in the internal model - originalId of type List to store the - * original ids of the result. It corresponds to the originalId of the result represented in the internal model - pid of - * type List to store the persistent identifiers for the result. For - * each pid in the results represented in the internal model one pid in the external model is produced. The value - * correspondence is: - scheme corresponds to pid.qualifier.classid of the result represented in the internal model - - * value corresponds to the pid.value of the result represented in the internal model - dateofcollection of type String - * to store information about the time OpenAIRE collected the record. It corresponds to dateofcollection of the result - * represented in the internal model - lasteupdatetimestamp of type String to store the timestamp of the last update of - * the record. It corresponds to lastupdatetimestamp of the resord represented in the internal model - */ -public class Result implements Serializable { - - private List author; - - // resulttype allows subclassing results into publications | datasets | software - private String type; // resulttype - - // common fields - private Qualifier language; - - private List country; - - private List subjects; - - private String maintitle; - - private String subtitle; - - private List description; - - private String publicationdate; // dateofacceptance; - - private String publisher; - - private String embargoenddate; - - private List source; - - private List format; - - private List contributor; - - private List coverage; - - private AccessRight bestaccessright; - - private Container container;// Journal - - private List documentationUrl; // software - - private String codeRepositoryUrl; // software - - private String programmingLanguage; // software - - private List contactperson; // orp - - private List contactgroup; // orp - - private List tool; // orp - - private String size; // dataset - - private String version; // dataset - - private List geolocation; // dataset - - private String id; - - private List originalId; - - private List pid; - - private String dateofcollection; - - private Long lastupdatetimestamp; - - public Long getLastupdatetimestamp() { - return lastupdatetimestamp; - } - - public void setLastupdatetimestamp(Long lastupdatetimestamp) { - this.lastupdatetimestamp = lastupdatetimestamp; - } - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public List getOriginalId() { - return originalId; - } - - public void setOriginalId(List originalId) { - this.originalId = originalId; - } - - public List getPid() { - return pid; - } - - public void setPid(List pid) { - this.pid = pid; - } - - public String getDateofcollection() { - return dateofcollection; - } - - public void setDateofcollection(String dateofcollection) { - this.dateofcollection = dateofcollection; - } - - public List getAuthor() { - return author; - } - - public String getType() { - return type; - } - - public void setType(String type) { - this.type = type; - } - - public Container getContainer() { - return container; - } - - public void setContainer(Container container) { - this.container = container; - } - - public void setAuthor(List author) { - this.author = author; - } - - public Qualifier getLanguage() { - return language; - } - - public void setLanguage(Qualifier language) { - this.language = language; - } - - public List getCountry() { - return country; - } - - public void setCountry(List country) { - this.country = country; - } - - public List getSubjects() { - return subjects; - } - - public void setSubjects(List subjects) { - this.subjects = subjects; - } - - public String getMaintitle() { - return maintitle; - } - - public void setMaintitle(String maintitle) { - this.maintitle = maintitle; - } - - public String getSubtitle() { - return subtitle; - } - - public void setSubtitle(String subtitle) { - this.subtitle = subtitle; - } - - public List getDescription() { - return description; - } - - public void setDescription(List description) { - this.description = description; - } - - public String getPublicationdate() { - return publicationdate; - } - - public void setPublicationdate(String publicationdate) { - this.publicationdate = publicationdate; - } - - public String getPublisher() { - return publisher; - } - - public void setPublisher(String publisher) { - this.publisher = publisher; - } - - public String getEmbargoenddate() { - return embargoenddate; - } - - public void setEmbargoenddate(String embargoenddate) { - this.embargoenddate = embargoenddate; - } - - public List getSource() { - return source; - } - - public void setSource(List source) { - this.source = source; - } - - public List getFormat() { - return format; - } - - public void setFormat(List format) { - this.format = format; - } - - public List getContributor() { - return contributor; - } - - public void setContributor(List contributor) { - this.contributor = contributor; - } - - public List getCoverage() { - return coverage; - } - - public void setCoverage(List coverage) { - this.coverage = coverage; - } - - public AccessRight getBestaccessright() { - return bestaccessright; - } - - public void setBestaccessright(AccessRight bestaccessright) { - this.bestaccessright = bestaccessright; - } - - public List getDocumentationUrl() { - return documentationUrl; - } - - public void setDocumentationUrl(List documentationUrl) { - this.documentationUrl = documentationUrl; - } - - public String getCodeRepositoryUrl() { - return codeRepositoryUrl; - } - - public void setCodeRepositoryUrl(String codeRepositoryUrl) { - this.codeRepositoryUrl = codeRepositoryUrl; - } - - public String getProgrammingLanguage() { - return programmingLanguage; - } - - public void setProgrammingLanguage(String programmingLanguage) { - this.programmingLanguage = programmingLanguage; - } - - public List getContactperson() { - return contactperson; - } - - public void setContactperson(List contactperson) { - this.contactperson = contactperson; - } - - public List getContactgroup() { - return contactgroup; - } - - public void setContactgroup(List contactgroup) { - this.contactgroup = contactgroup; - } - - public List getTool() { - return tool; - } - - public void setTool(List tool) { - this.tool = tool; - } - - public String getSize() { - return size; - } - - public void setSize(String size) { - this.size = size; - } - - public String getVersion() { - return version; - } - - public void setVersion(String version) { - this.version = version; - } - - public List getGeolocation() { - return geolocation; - } - - public void setGeolocation(List geolocation) { - this.geolocation = geolocation; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Subject.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Subject.java deleted file mode 100644 index 5c4bbef3c..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/Subject.java +++ /dev/null @@ -1,34 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf; - -import java.io.Serializable; - -/** - * To represent keywords associated to the result. It has two parameters: - subject of type - * eu.dnetlib.dhp.schema.dump.oaf.ControlledField to describe the subject. It mapped as: - schema it corresponds to - * qualifier.classid of the dumped subject - value it corresponds to the subject value - provenance of type - * eu.dnetlib.dhp.schema.dump.oaf.Provenance to represent the provenance of the subject. It is dumped only if dataInfo - * is not null. In this case: - provenance corresponds to dataInfo.provenanceaction.classname - trust corresponds to - * dataInfo.trust - */ -public class Subject implements Serializable { - private ControlledField subject; - private Provenance provenance; - - public ControlledField getSubject() { - return subject; - } - - public void setSubject(ControlledField subject) { - this.subject = subject; - } - - public Provenance getProvenance() { - return provenance; - } - - public void setProvenance(Provenance provenance) { - this.provenance = provenance; - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/CommunityInstance.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/CommunityInstance.java deleted file mode 100644 index 6a605d742..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/CommunityInstance.java +++ /dev/null @@ -1,36 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.community; - -import eu.dnetlib.dhp.schema.dump.oaf.Instance; -import eu.dnetlib.dhp.schema.dump.oaf.KeyValue; - -/** - * It extends eu.dnetlib.dhp.dump.oaf.Instance with values related to the community dump. In the Result dump this - * information is not present because it is dumped as a set of relations between the result and the datasource. - - * hostedby of type eu.dnetlib.dhp.schema.dump.oaf.KeyValue to store the information about the source from which the - * instance can be viewed or downloaded. It is mapped against the hostedby parameter of the instance to be dumped and - - * key corresponds to hostedby.key - value corresponds to hostedby.value - collectedfrom of type - * eu.dnetlib.dhp.schema.dump.oaf.KeyValue to store the information about the source from which the instance has been - * collected. It is mapped against the collectedfrom parameter of the instance to be dumped and - key corresponds to - * collectedfrom.key - value corresponds to collectedfrom.value - */ -public class CommunityInstance extends Instance { - private KeyValue hostedby; - private KeyValue collectedfrom; - - public KeyValue getHostedby() { - return hostedby; - } - - public void setHostedby(KeyValue hostedby) { - this.hostedby = hostedby; - } - - public KeyValue getCollectedfrom() { - return collectedfrom; - } - - public void setCollectedfrom(KeyValue collectedfrom) { - this.collectedfrom = collectedfrom; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/CommunityResult.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/CommunityResult.java deleted file mode 100644 index 690a53706..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/CommunityResult.java +++ /dev/null @@ -1,63 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.community; - -import java.util.List; - -import eu.dnetlib.dhp.schema.dump.oaf.KeyValue; -import eu.dnetlib.dhp.schema.dump.oaf.Result; - -/** - * extends eu.dnetlib.dhp.schema.dump.oaf.Result with the following parameters: - projects of type - * List to store the list of projects related to the result. The - * information is added after the result is mapped to the external model - context of type - * List to store information about the RC RI related to the result. - * For each context in the result represented in the internal model one context in the external model is produced - - * collectedfrom of type List to store information about the sources from which - * the record has been collected. For each collectedfrom in the result represented in the internal model one - * collectedfrom in the external model is produced - instance of type - * List to store all the instances associated to the result. - * It corresponds to the same parameter in the result represented in the internal model - */ -public class CommunityResult extends Result { - - private List projects; - - private List context; - - protected List collectedfrom; - - private List instance; - - public List getInstance() { - return instance; - } - - public void setInstance(List instance) { - this.instance = instance; - } - - public List getCollectedfrom() { - return collectedfrom; - } - - public void setCollectedfrom(List collectedfrom) { - this.collectedfrom = collectedfrom; - } - - public List getProjects() { - return projects; - } - - public void setProjects(List projects) { - this.projects = projects; - } - - public List getContext() { - return context; - } - - public void setContext(List context) { - this.context = context; - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Context.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Context.java deleted file mode 100644 index 3ad692b30..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Context.java +++ /dev/null @@ -1,40 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.community; - -import java.util.List; -import java.util.Objects; - -import eu.dnetlib.dhp.schema.dump.oaf.Provenance; -import eu.dnetlib.dhp.schema.dump.oaf.Qualifier; - -/** - * Reference to a relevant research infrastructure, initiative or community (RI/RC) among those collaborating with - * OpenAIRE. It extend eu.dnetlib.dhp.shema.dump.oaf.Qualifier with a parameter provenance of type - * List to store the provenances of the association between the result and - * the RC/RI. The values for this element correspond to: - code: it corresponds to the id of the context in the result - * to be mapped. If the context id refers to a RC/RI and contains '::' only the part of the id before the first "::" - * will be used as value for code - label it corresponds to the label associated to the id. The information id taken - * from the profile of the RC/RI - provenance it is set only if the dataInfo associated to the contenxt element of the - * result to be dumped is not null. For each dataInfo one instance of type eu.dnetlib.dhp.schema.dump.oaf.Provenance is - * instantiated if the element datainfo.provenanceaction is not null. In this case - provenance corresponds to - * dataInfo.provenanceaction.classname - trust corresponds to dataInfo.trust - */ -public class Context extends Qualifier { - private List provenance; - - public List getProvenance() { - return provenance; - } - - public void setProvenance(List provenance) { - this.provenance = provenance; - } - - @Override - public int hashCode() { - String provenance = new String(); - this.provenance.forEach(p -> provenance.concat(p.toString())); - return Objects.hash(getCode(), getLabel(), provenance); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Funder.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Funder.java deleted file mode 100644 index adb41634a..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Funder.java +++ /dev/null @@ -1,23 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.community; - -import java.io.Serializable; - -/** - * To store information about the funder funding the project related to the result. It has the following parameters: - - * shortName of type String to store the funder short name (e.c. AKA). - name of type String to store the funder name - * (e.c. Akademy of Finland) - fundingStream of type String to store the funding stream - jurisdiction of type String to - * store the jurisdiction of the funder - */ -public class Funder extends eu.dnetlib.dhp.schema.dump.oaf.Funder { - - private String fundingStream; - - public String getFundingStream() { - return fundingStream; - } - - public void setFundingStream(String fundingStream) { - this.fundingStream = fundingStream; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Project.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Project.java deleted file mode 100644 index 030b565be..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/community/Project.java +++ /dev/null @@ -1,47 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.community; - -import java.io.Serializable; - -import eu.dnetlib.dhp.schema.dump.oaf.Provenance; - -/** - * To store information about the project related to the result. This information is not directly mapped from the result - * represented in the internal model because it is not there. The mapped result will be enriched with project - * information derived by relation between results and projects. Project extends eu.dnetlib.dhp.schema.dump.oaf.Project - * with the following parameters: - funder of type eu.dnetlib.dhp.schema.dump.oaf.community.Funder to store information - * about the funder funding the project - provenance of type eu.dnetlib.dhp.schema.dump.oaf.Provenance to store - * information about the. provenance of the association between the result and the project - */ -public class Project extends eu.dnetlib.dhp.schema.dump.oaf.Project { - - private Funder funder; - - private Provenance provenance; - - public Provenance getProvenance() { - return provenance; - } - - public void setProvenance(Provenance provenance) { - this.provenance = provenance; - } - - public Funder getFunder() { - return funder; - } - - public void setFunder(Funder funders) { - this.funder = funders; - } - - public static Project newInstance(String id, String code, String acronym, String title, Funder funder) { - Project project = new Project(); - project.setAcronym(acronym); - project.setCode(code); - project.setFunder(funder); - project.setId(id); - project.setTitle(title); - return project; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Constants.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Constants.java deleted file mode 100644 index 35cc60c1c..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Constants.java +++ /dev/null @@ -1,21 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; - -public class Constants implements Serializable { - // collectedFrom va con isProvidedBy -> becco da ModelSupport - - public static final String HOSTED_BY = "isHostedBy"; - public static final String HOSTS = "hosts"; - - // community result uso isrelatedto - - public static final String RESULT_ENTITY = "result"; - public static final String DATASOURCE_ENTITY = "datasource"; - public static final String CONTEXT_ENTITY = "context"; - - public static final String CONTEXT_ID = "60"; - public static final String CONTEXT_NS_PREFIX = "context____"; - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Datasource.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Datasource.java deleted file mode 100644 index 6b2b7b1ab..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Datasource.java +++ /dev/null @@ -1,316 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; -import java.util.List; - -import eu.dnetlib.dhp.schema.dump.oaf.Container; -import eu.dnetlib.dhp.schema.dump.oaf.ControlledField; -import eu.dnetlib.dhp.schema.dump.oaf.KeyValue; - -/** - * To store information about the datasource OpenAIRE collects information from. It contains the following parameters: - - * id of type String to store the OpenAIRE id for the datasource. It corresponds to the parameter id of the datasource - * represented in the internal model - originalId of type List to store the list of original ids associated to - * the datasource. It corresponds to the parameter originalId of the datasource represented in the internal model. The - * null values are filtered out - pid of type List to store the - * persistent identifiers for the datasource. For each pid in the datasource represented in the internal model one pid - * in the external model is produced as : - schema corresponds to pid.qualifier.classid of the datasource represented in - * the internal model - value corresponds to pid.value of the datasource represented in the internal model - - * datasourceType of type eu.dnetlib.dhp.schema.dump.oaf.ControlledField to store the datasource type (e.g. - * pubsrepository::institutional, Institutional Repository) as in the dnet vocabulary dnet:datasource_typologies. It - * corresponds to datasourcetype of the datasource represented in the internal model and : - code corresponds to - * datasourcetype.classid - value corresponds to datasourcetype.classname - openairecompatibility of type String to - * store information about the OpenAIRE compatibility of the ingested results (which guidelines they are compliant to). - * It corresponds to openairecompatibility.classname of the datasource represented in the internal model - officialname - * of type Sgtring to store the official name of the datasource. It correspond to officialname.value of the datasource - * represented in the internal model - englishname of type String to store the English name of the datasource. It - * corresponds to englishname.value of the datasource represented in the internal model - websiteurl of type String to - * store the URL of the website of the datasource. It corresponds to websiteurl.value of the datasource represented in - * the internal model - logourl of type String to store the URL of the logo for the datasource. It corresponds to - * logourl.value of the datasource represented in the internal model - dateofvalidation of type String to store the data - * of validation against the guidelines for the datasource records. It corresponds to dateofvalidation.value of the - * datasource represented in the internal model - description of type String to store the description for the - * datasource. It corresponds to description.value of the datasource represented in the internal model - */ -public class Datasource implements Serializable { - - private String id; // string - - private List originalId; // list string - - private List pid; // list - - private ControlledField datasourcetype; // value - - private String openairecompatibility; // value - - private String officialname; // string - - private String englishname; // string - - private String websiteurl; // string - - private String logourl; // string - - private String dateofvalidation; // string - - private String description; // description - - private List subjects; // List - - // opendoar specific fields (od*) - - private List languages; // odlanguages List - - private List contenttypes; // odcontent types List - - // re3data fields - private String releasestartdate; // string - - private String releaseenddate; // string - - private String missionstatementurl; // string - - // {open, restricted or closed} - private String accessrights; // databaseaccesstype string - - // {open, restricted or closed} - private String uploadrights; // datauploadtype string - - // {feeRequired, registration, other} - private String databaseaccessrestriction; // string - - // {feeRequired, registration, other} - private String datauploadrestriction; // string - - private Boolean versioning; // boolean - - private String citationguidelineurl; // string - - // {yes, no, uknown} - - private String pidsystems; // string - - private String certificates; // string - - private List policies; // - - private Container journal; // issn etc del Journal - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public List getOriginalId() { - return originalId; - } - - public void setOriginalId(List originalId) { - this.originalId = originalId; - } - - public List getPid() { - return pid; - } - - public void setPid(List pid) { - this.pid = pid; - } - - public ControlledField getDatasourcetype() { - return datasourcetype; - } - - public void setDatasourcetype(ControlledField datasourcetype) { - this.datasourcetype = datasourcetype; - } - - public String getOpenairecompatibility() { - return openairecompatibility; - } - - public void setOpenairecompatibility(String openairecompatibility) { - this.openairecompatibility = openairecompatibility; - } - - public String getOfficialname() { - return officialname; - } - - public void setOfficialname(String officialname) { - this.officialname = officialname; - } - - public String getEnglishname() { - return englishname; - } - - public void setEnglishname(String englishname) { - this.englishname = englishname; - } - - public String getWebsiteurl() { - return websiteurl; - } - - public void setWebsiteurl(String websiteurl) { - this.websiteurl = websiteurl; - } - - public String getLogourl() { - return logourl; - } - - public void setLogourl(String logourl) { - this.logourl = logourl; - } - - public String getDateofvalidation() { - return dateofvalidation; - } - - public void setDateofvalidation(String dateofvalidation) { - this.dateofvalidation = dateofvalidation; - } - - public String getDescription() { - return description; - } - - public void setDescription(String description) { - this.description = description; - } - - public List getSubjects() { - return subjects; - } - - public void setSubjects(List subjects) { - this.subjects = subjects; - } - - public List getLanguages() { - return languages; - } - - public void setLanguages(List languages) { - this.languages = languages; - } - - public List getContenttypes() { - return contenttypes; - } - - public void setContenttypes(List contenttypes) { - this.contenttypes = contenttypes; - } - - public String getReleasestartdate() { - return releasestartdate; - } - - public void setReleasestartdate(String releasestartdate) { - this.releasestartdate = releasestartdate; - } - - public String getReleaseenddate() { - return releaseenddate; - } - - public void setReleaseenddate(String releaseenddate) { - this.releaseenddate = releaseenddate; - } - - public String getMissionstatementurl() { - return missionstatementurl; - } - - public void setMissionstatementurl(String missionstatementurl) { - this.missionstatementurl = missionstatementurl; - } - - public String getAccessrights() { - return accessrights; - } - - public void setAccessrights(String accessrights) { - this.accessrights = accessrights; - } - - public String getUploadrights() { - return uploadrights; - } - - public void setUploadrights(String uploadrights) { - this.uploadrights = uploadrights; - } - - public String getDatabaseaccessrestriction() { - return databaseaccessrestriction; - } - - public void setDatabaseaccessrestriction(String databaseaccessrestriction) { - this.databaseaccessrestriction = databaseaccessrestriction; - } - - public String getDatauploadrestriction() { - return datauploadrestriction; - } - - public void setDatauploadrestriction(String datauploadrestriction) { - this.datauploadrestriction = datauploadrestriction; - } - - public Boolean getVersioning() { - return versioning; - } - - public void setVersioning(Boolean versioning) { - this.versioning = versioning; - } - - public String getCitationguidelineurl() { - return citationguidelineurl; - } - - public void setCitationguidelineurl(String citationguidelineurl) { - this.citationguidelineurl = citationguidelineurl; - } - - public String getPidsystems() { - return pidsystems; - } - - public void setPidsystems(String pidsystems) { - this.pidsystems = pidsystems; - } - - public String getCertificates() { - return certificates; - } - - public void setCertificates(String certificates) { - this.certificates = certificates; - } - - public List getPolicies() { - return policies; - } - - public void setPolicies(List policiesr3) { - this.policies = policiesr3; - } - - public Container getJournal() { - return journal; - } - - public void setJournal(Container journal) { - this.journal = journal; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Funder.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Funder.java deleted file mode 100644 index 3b298c81d..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Funder.java +++ /dev/null @@ -1,22 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; - -/** - * To store information about the funder funding the project related to the result. It extends - * eu.dnetlib.dhp.schema.dump.oaf.Funder with the following parameter: - - private - * eu.dnetdlib.dhp.schema.dump.oaf.graph.Fundings funding_stream to store the fundingstream - */ -public class Funder extends eu.dnetlib.dhp.schema.dump.oaf.Funder { - - private Fundings funding_stream; - - public Fundings getFunding_stream() { - return funding_stream; - } - - public void setFunding_stream(Fundings funding_stream) { - this.funding_stream = funding_stream; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Fundings.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Fundings.java deleted file mode 100644 index a74c34778..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Fundings.java +++ /dev/null @@ -1,35 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; - -/** - * To store inforamtion about the funding stream. It has two parameters: - private String id to store the id of the - * fundings stream. The id is created by appending the shortname of the funder to the name of each level in the xml - * representing the fundng stream. For example: if the funder is the European Commission, the funding level 0 name is - * FP7, the funding level 1 name is SP3 and the funding level 2 name is PEOPLE then the id will be: EC::FP7::SP3::PEOPLE - * - private String description to describe the funding stream. It is created by concatenating the description of each - * funding level so for the example above the description would be: SEVENTH FRAMEWORK PROGRAMME - SP3-People - - * Marie-Curie Actions - */ -public class Fundings implements Serializable { - - private String id; - private String description; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public String getDescription() { - return description; - } - - public void setDescription(String description) { - this.description = description; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Granted.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Granted.java deleted file mode 100644 index 94ace55aa..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Granted.java +++ /dev/null @@ -1,55 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; -import java.util.Optional; - -/** - * To describe the funded amount. It has the following parameters: - private String currency to store the currency of - * the fund - private float totalcost to store the total cost of the project - private float fundedamount to store the - * funded amount by the funder - */ -public class Granted implements Serializable { - private String currency; - private float totalcost; - private float fundedamount; - - public String getCurrency() { - return currency; - } - - public void setCurrency(String currency) { - this.currency = currency; - } - - public float getTotalcost() { - return totalcost; - } - - public void setTotalcost(float totalcost) { - this.totalcost = totalcost; - } - - public float getFundedamount() { - return fundedamount; - } - - public void setFundedamount(float fundedamount) { - this.fundedamount = fundedamount; - } - - public static Granted newInstance(String currency, float totalcost, float fundedamount) { - Granted granted = new Granted(); - granted.currency = currency; - granted.totalcost = totalcost; - granted.fundedamount = fundedamount; - return granted; - } - - public static Granted newInstance(String currency, float fundedamount) { - Granted granted = new Granted(); - granted.currency = currency; - granted.fundedamount = fundedamount; - return granted; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/GraphResult.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/GraphResult.java deleted file mode 100644 index 1675f9ec5..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/GraphResult.java +++ /dev/null @@ -1,24 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.util.List; - -import eu.dnetlib.dhp.schema.dump.oaf.Instance; -import eu.dnetlib.dhp.schema.dump.oaf.Result; - -/** - * It extends the eu.dnetlib.dhp.schema.dump.oaf.Result with - instance of type - * List to store all the instances associated to the result. It corresponds to - * the same parameter in the result represented in the internal model - */ -public class GraphResult extends Result { - private List instance; - - public List getInstance() { - return instance; - } - - public void setInstance(List instance) { - this.instance = instance; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/H2020Classification.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/H2020Classification.java deleted file mode 100644 index 4a61663b8..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/H2020Classification.java +++ /dev/null @@ -1,82 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; - -/** - * To store information about the classification for the project. The classification depends on the programme. For example - * H2020-EU.3.4.5.3 can be classified as - * H2020-EU.3. => Societal Challenges (level1) - * H2020-EU.3.4. => Transport (level2) - * H2020-EU.3.4.5. => CLEANSKY2 (level3) - * H2020-EU.3.4.5.3. => IADP Fast Rotorcraft (level4) - * - * We decided to explicitly represent up to three levels in the classification. - * - * H2020Classification has the following parameters: - * - private Programme programme to store the information about the programme related to this classification - * - private String level1 to store the information about the level 1 of the classification (Priority or Pillar of the EC) - * - private String level2 to store the information about the level2 af the classification (Objectives (?)) - * - private String level3 to store the information about the level3 of the classification - * - private String classification to store the entire classification related to the programme - */ -public class H2020Classification implements Serializable { - private Programme programme; - - private String level1; - private String level2; - private String level3; - - private String classification; - - public Programme getProgramme() { - return programme; - } - - public void setProgramme(Programme programme) { - this.programme = programme; - } - - public String getLevel1() { - return level1; - } - - public void setLevel1(String level1) { - this.level1 = level1; - } - - public String getLevel2() { - return level2; - } - - public void setLevel2(String level2) { - this.level2 = level2; - } - - public String getLevel3() { - return level3; - } - - public void setLevel3(String level3) { - this.level3 = level3; - } - - public String getClassification() { - return classification; - } - - public void setClassification(String classification) { - this.classification = classification; - } - - public static H2020Classification newInstance(String programme_code, String programme_description, String level1, - String level2, String level3, String classification) { - H2020Classification h2020classification = new H2020Classification(); - h2020classification.programme = Programme.newInstance(programme_code, programme_description); - h2020classification.level1 = level1; - h2020classification.level2 = level2; - h2020classification.level3 = level3; - h2020classification.classification = classification; - return h2020classification; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Node.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Node.java deleted file mode 100644 index 00f1a29bc..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Node.java +++ /dev/null @@ -1,38 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; - -/** - * To represent the generic node in a relation. It has the following parameters: - private String id the openaire id of - * the entity in the relation - private String type the type of the entity in the relation. Consider the generic - * relation between a Result R and a Project P, the node representing R will have as id the id of R and as type result, - * while the node representing the project will have as id the id of the project and as type project - */ -public class Node implements Serializable { - private String id; - private String type; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public String getType() { - return type; - } - - public void setType(String type) { - this.type = type; - } - - public static Node newInstance(String id, String type) { - Node node = new Node(); - node.id = id; - node.type = type; - return node; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Organization.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Organization.java deleted file mode 100644 index 2407c9cfc..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Organization.java +++ /dev/null @@ -1,86 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; -import java.util.List; - -import eu.dnetlib.dhp.schema.dump.oaf.ControlledField; -import eu.dnetlib.dhp.schema.dump.oaf.Country; -import eu.dnetlib.dhp.schema.dump.oaf.KeyValue; -import eu.dnetlib.dhp.schema.dump.oaf.Qualifier; -import eu.dnetlib.dhp.schema.dump.oaf.community.Project; - -/** - * To represent the generic organizaiton. It has the following parameters: - private String legalshortname to store the - * legalshortname of the organizaiton - private String legalname to store the legal name of the organization - private - * String websiteurl to store the websiteurl of the organization - private List alternativenames to store the - * alternative names of the organization - private Qualifier country to store the country of the organization - private - * String id to store the id of the organization - private List pid to store the list of pids for the - * organization - */ -public class Organization implements Serializable { - private String legalshortname; - private String legalname; - private String websiteurl; - private List alternativenames; - private Qualifier country; - private String id; - private List pid; - - public String getLegalshortname() { - return legalshortname; - } - - public void setLegalshortname(String legalshortname) { - this.legalshortname = legalshortname; - } - - public String getLegalname() { - return legalname; - } - - public void setLegalname(String legalname) { - this.legalname = legalname; - } - - public String getWebsiteurl() { - return websiteurl; - } - - public void setWebsiteurl(String websiteurl) { - this.websiteurl = websiteurl; - } - - public List getAlternativenames() { - return alternativenames; - } - - public void setAlternativenames(List alternativenames) { - this.alternativenames = alternativenames; - } - - public Qualifier getCountry() { - return country; - } - - public void setCountry(Qualifier country) { - this.country = country; - } - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public List getPid() { - return pid; - } - - public void setPid(List pid) { - this.pid = pid; - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Programme.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Programme.java deleted file mode 100644 index 9892790e3..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Programme.java +++ /dev/null @@ -1,36 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; - -/** - * To store information about the ec programme for the project. It has the following parameters: - private String code - * to store the code of the programme - private String description to store the description of the programme - */ -public class Programme implements Serializable { - private String code; - private String description; - - public String getCode() { - return code; - } - - public void setCode(String code) { - this.code = code; - } - - public String getDescription() { - return description; - } - - public void setDescription(String description) { - this.description = description; - } - - public static Programme newInstance(String code, String description) { - Programme p = new Programme(); - p.code = code; - p.description = description; - return p; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Project.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Project.java deleted file mode 100644 index 612be9d25..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Project.java +++ /dev/null @@ -1,192 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; -import java.util.List; - -/** - * This is the class representing the Project in the model used for the dumps of the whole graph. At the moment the dump - * of the Projects differs from the other dumps because we do not create relations between Funders (Organization) and - * Projects but we put the information about the Funder within the Project representation. We also removed the - * collected from element from the Project. No relation between the Project and the Datasource entity from which it is - * collected will be created. We will never create relations between Project and Datasource. In case some relation will - * be extracted from the Project they will refer the Funder and will be of type ( organization -> funds -> project, - * project -> isFundedBy -> organization) We also removed the duration parameter because the most of times it is set to - * 0. It has the following parameters: - * - private String id to store the id of the project (OpenAIRE id) - * - private String websiteurl to store the websiteurl of the project - * - private String code to store the grant agreement of the project - * - private String acronym to store the acronym of the project - * - private String title to store the tile of the project - * - private String startdate to store the start date - * - private String enddate to store the end date - * - private String callidentifier to store the call indentifier - * - private String keywords to store the keywords - * - private boolean openaccessmandateforpublications to store if the project must accomplish to the open access mandate - * for publications. This value will be set to true if one of the field in the project represented in the internal model - * is set to true - * - private boolean openaccessmandatefordataset to store if the project must accomplish to the open access mandate for - * dataset. It is set to the value in the corresponding filed of the project represented in the internal model - * - private List subject to store the list of subjects of the project - * - private List funding to store the list of funder of the project - * - private String summary to store the summary of the project - * - private Granted granted to store the granted amount - * - private List h2020programme to store the list of programmes the project is related to - */ - -public class Project implements Serializable { - private String id; - - private String websiteurl; - private String code; - private String acronym; - private String title; - private String startdate; - - private String enddate; - - private String callidentifier; - - private String keywords; - - private boolean openaccessmandateforpublications; - - private boolean openaccessmandatefordataset; - private List subject; - - private List funding; - - private String summary; - - private Granted granted; - - private List h2020programme; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public String getWebsiteurl() { - return websiteurl; - } - - public void setWebsiteurl(String websiteurl) { - this.websiteurl = websiteurl; - } - - public String getCode() { - return code; - } - - public void setCode(String code) { - this.code = code; - } - - public String getAcronym() { - return acronym; - } - - public void setAcronym(String acronym) { - this.acronym = acronym; - } - - public String getTitle() { - return title; - } - - public void setTitle(String title) { - this.title = title; - } - - public String getStartdate() { - return startdate; - } - - public void setStartdate(String startdate) { - this.startdate = startdate; - } - - public String getEnddate() { - return enddate; - } - - public void setEnddate(String enddate) { - this.enddate = enddate; - } - - public String getCallidentifier() { - return callidentifier; - } - - public void setCallidentifier(String callidentifier) { - this.callidentifier = callidentifier; - } - - public String getKeywords() { - return keywords; - } - - public void setKeywords(String keywords) { - this.keywords = keywords; - } - - public boolean isOpenaccessmandateforpublications() { - return openaccessmandateforpublications; - } - - public void setOpenaccessmandateforpublications(boolean openaccessmandateforpublications) { - this.openaccessmandateforpublications = openaccessmandateforpublications; - } - - public boolean isOpenaccessmandatefordataset() { - return openaccessmandatefordataset; - } - - public void setOpenaccessmandatefordataset(boolean openaccessmandatefordataset) { - this.openaccessmandatefordataset = openaccessmandatefordataset; - } - - public List getSubject() { - return subject; - } - - public void setSubject(List subject) { - this.subject = subject; - } - - public List getFunding() { - return funding; - } - - public void setFunding(List funding) { - this.funding = funding; - } - - public String getSummary() { - return summary; - } - - public void setSummary(String summary) { - this.summary = summary; - } - - public Granted getGranted() { - return granted; - } - - public void setGranted(Granted granted) { - this.granted = granted; - } - - public List getH2020programme() { - return h2020programme; - } - - public void setH2020programme(List h2020programme) { - this.h2020programme = h2020programme; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/RelType.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/RelType.java deleted file mode 100644 index 629b30ee4..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/RelType.java +++ /dev/null @@ -1,39 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; - -/** - * To represent the semantics of the generic relation between two entities. It has the following parameters: - private - * String name to store the semantics of the relation (i.e. isAuthorInstitutionOf). It corresponds to the relclass - * parameter in the relation represented in the internal model represented in the internal model - private String type - * to store the type of the relation (i.e. affiliation). It corresponds to the subreltype parameter of the relation - * represented in theinternal model - */ -public class RelType implements Serializable { - private String name; // relclass - private String type; // subreltype - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public String getType() { - return type; - } - - public void setType(String type) { - this.type = type; - } - - public static RelType newInstance(String name, String type) { - RelType rel = new RelType(); - rel.name = name; - rel.type = type; - return rel; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Relation.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Relation.java deleted file mode 100644 index e2b126e63..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/Relation.java +++ /dev/null @@ -1,67 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; -import java.util.Objects; - -import eu.dnetlib.dhp.schema.dump.oaf.Provenance; - -/** - * To represent the gereric relation between two entities. It has the following parameters: - private Node source to - * represent the entity source of the relation - private Node target to represent the entity target of the relation - - * private RelType reltype to represent the semantics of the relation - private Provenance provenance to represent the - * provenance of the relation - */ -public class Relation implements Serializable { - private Node source; - private Node target; - private RelType reltype; - private Provenance provenance; - - public Node getSource() { - return source; - } - - public void setSource(Node source) { - this.source = source; - } - - public Node getTarget() { - return target; - } - - public void setTarget(Node target) { - this.target = target; - } - - public RelType getReltype() { - return reltype; - } - - public void setReltype(RelType reltype) { - this.reltype = reltype; - } - - public Provenance getProvenance() { - return provenance; - } - - public void setProvenance(Provenance provenance) { - this.provenance = provenance; - } - - @Override - public int hashCode() { - - return Objects.hash(source.getId(), target.getId(), reltype.getType() + ":" + reltype.getName()); - } - - public static Relation newInstance(Node source, Node target, RelType reltype, Provenance provenance) { - Relation relation = new Relation(); - relation.source = source; - relation.target = target; - relation.reltype = reltype; - relation.provenance = provenance; - return relation; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/ResearchCommunity.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/ResearchCommunity.java deleted file mode 100644 index 026042ce9..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/ResearchCommunity.java +++ /dev/null @@ -1,20 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.util.List; - -/** - * To represent RC entities. It extends eu.dnetlib.dhp.dump.oaf.grap.ResearchInitiative by adding the parameter subject - * to store the list of subjects related to the community - */ -public class ResearchCommunity extends ResearchInitiative { - private List subject; - - public List getSubject() { - return subject; - } - - public void setSubject(List subject) { - this.subject = subject; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/ResearchInitiative.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/ResearchInitiative.java deleted file mode 100644 index ad4ad8877..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/dump/oaf/graph/ResearchInitiative.java +++ /dev/null @@ -1,75 +0,0 @@ - -package eu.dnetlib.dhp.schema.dump.oaf.graph; - -import java.io.Serializable; - -/** - * To represent entity of type RC/RI. It has the following parameters, which are mostly derived by the profile - * - private - * String id to store the openaire id for the entity. Is has as code 00 and will be created as - * 00|context_____::md5(originalId) private - * String originalId to store the id of the context as provided in the profile - * (i.e. mes) - * - private String name to store the name of the context (got from the label attribute in the context - * definition) - * - private String type to store the type of the context (i.e.: research initiative or research community) - * - private String description to store the description of the context as given in the profile - * -private String - * zenodo_community to store the zenodo community associated to the context (main zenodo community) - */ -public class ResearchInitiative implements Serializable { - private String id; // openaireId - private String originalId; // context id - private String name; // context name - private String type; // context type: research initiative or research community - private String description; - private String zenodo_community; - - public String getZenodo_community() { - return zenodo_community; - } - - public void setZenodo_community(String zenodo_community) { - this.zenodo_community = zenodo_community; - } - - public String getType() { - return type; - } - - public void setType(String type) { - this.type = type; - } - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public String getName() { - return name; - } - - public void setName(String label) { - this.name = label; - } - - public String getOriginalId() { - return originalId; - } - - public void setOriginalId(String originalId) { - this.originalId = originalId; - } - - public String getDescription() { - return description; - } - - public void setDescription(String description) { - this.description = description; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Author.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Author.java deleted file mode 100644 index b2f757d71..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Author.java +++ /dev/null @@ -1,90 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.*; - -public class Author implements Serializable { - - private String fullname; - - private String name; - - private String surname; - - // START WITH 1 - private Integer rank; - - private List pid; - - private List> affiliation; - - public String getFullname() { - return fullname; - } - - public void setFullname(String fullname) { - this.fullname = fullname; - } - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public String getSurname() { - return surname; - } - - public void setSurname(String surname) { - this.surname = surname; - } - - public Integer getRank() { - return rank; - } - - public void setRank(Integer rank) { - this.rank = rank; - } - - public List getPid() { - return pid; - } - - public void setPid(List pid) { - this.pid = pid; - } - - public List> getAffiliation() { - return affiliation; - } - - public void setAffiliation(List> affiliation) { - this.affiliation = affiliation; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - Author author = (Author) o; - return Objects.equals(fullname, author.fullname) - && Objects.equals(name, author.name) - && Objects.equals(surname, author.surname) - && Objects.equals(rank, author.rank) - && Objects.equals(pid, author.pid) - && Objects.equals(affiliation, author.affiliation); - } - - @Override - public int hashCode() { - return Objects.hash(fullname, name, surname, rank, pid, affiliation); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Context.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Context.java deleted file mode 100644 index 57912c463..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Context.java +++ /dev/null @@ -1,46 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; - -public class Context implements Serializable { - private String id; - - private List dataInfo; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public List getDataInfo() { - return dataInfo; - } - - public void setDataInfo(List dataInfo) { - this.dataInfo = dataInfo; - } - - @Override - public int hashCode() { - return id == null ? 0 : id.hashCode(); - } - - @Override - public boolean equals(Object obj) { - if (this == obj) - return true; - if (obj == null) - return false; - if (getClass() != obj.getClass()) - return false; - - Context other = (Context) obj; - - return id.equals(other.getId()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Country.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Country.java deleted file mode 100644 index e25fdcade..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Country.java +++ /dev/null @@ -1,34 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.util.Objects; - -public class Country extends Qualifier { - - private DataInfo dataInfo; - - public DataInfo getDataInfo() { - return dataInfo; - } - - public void setDataInfo(DataInfo dataInfo) { - this.dataInfo = dataInfo; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - if (!super.equals(o)) - return false; - Country country = (Country) o; - return Objects.equals(dataInfo, country.dataInfo); - } - - @Override - public int hashCode() { - return Objects.hash(super.hashCode(), dataInfo); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/DataInfo.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/DataInfo.java deleted file mode 100644 index 9d572ee30..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/DataInfo.java +++ /dev/null @@ -1,85 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Objects; - -public class DataInfo implements Serializable { - - private Boolean invisible = false; - private Boolean inferred; - private Boolean deletedbyinference = false; - private String trust; - private String inferenceprovenance; - private Qualifier provenanceaction; - - public Boolean getInvisible() { - return invisible; - } - - public void setInvisible(Boolean invisible) { - this.invisible = invisible; - } - - public Boolean getInferred() { - return inferred; - } - - public void setInferred(Boolean inferred) { - this.inferred = inferred; - } - - public Boolean getDeletedbyinference() { - return deletedbyinference; - } - - public void setDeletedbyinference(Boolean deletedbyinference) { - this.deletedbyinference = deletedbyinference; - } - - public String getTrust() { - return trust; - } - - public void setTrust(String trust) { - this.trust = trust; - } - - public String getInferenceprovenance() { - return inferenceprovenance; - } - - public void setInferenceprovenance(String inferenceprovenance) { - this.inferenceprovenance = inferenceprovenance; - } - - public Qualifier getProvenanceaction() { - return provenanceaction; - } - - public void setProvenanceaction(Qualifier provenanceaction) { - this.provenanceaction = provenanceaction; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - DataInfo dataInfo = (DataInfo) o; - return Objects.equals(invisible, dataInfo.invisible) - && Objects.equals(inferred, dataInfo.inferred) - && Objects.equals(deletedbyinference, dataInfo.deletedbyinference) - && Objects.equals(trust, dataInfo.trust) - && Objects.equals(inferenceprovenance, dataInfo.inferenceprovenance) - && Objects.equals(provenanceaction, dataInfo.provenanceaction); - } - - @Override - public int hashCode() { - return Objects - .hash( - invisible, inferred, deletedbyinference, trust, inferenceprovenance, provenanceaction); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java deleted file mode 100644 index b5587c6b7..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java +++ /dev/null @@ -1,116 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; - -import eu.dnetlib.dhp.schema.common.ModelConstants; - -public class Dataset extends Result implements Serializable { - - private Field storagedate; - - // candidate for removal - private Field device; - - private Field size; - - private Field version; - - private Field lastmetadataupdate; - - private Field metadataversionnumber; - - private List geolocation; - - public Dataset() { - setResulttype(ModelConstants.DATASET_DEFAULT_RESULTTYPE); - } - - public Field getStoragedate() { - return storagedate; - } - - public void setStoragedate(Field storagedate) { - this.storagedate = storagedate; - } - - public Field getDevice() { - return device; - } - - public void setDevice(Field device) { - this.device = device; - } - - public Field getSize() { - return size; - } - - public void setSize(Field size) { - this.size = size; - } - - public Field getVersion() { - return version; - } - - public void setVersion(Field version) { - this.version = version; - } - - public Field getLastmetadataupdate() { - return lastmetadataupdate; - } - - public void setLastmetadataupdate(Field lastmetadataupdate) { - this.lastmetadataupdate = lastmetadataupdate; - } - - public Field getMetadataversionnumber() { - return metadataversionnumber; - } - - public void setMetadataversionnumber(Field metadataversionnumber) { - this.metadataversionnumber = metadataversionnumber; - } - - public List getGeolocation() { - return geolocation; - } - - public void setGeolocation(List geolocation) { - this.geolocation = geolocation; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - if (!Dataset.class.isAssignableFrom(e.getClass())) { - return; - } - - final Dataset d = (Dataset) e; - - storagedate = d.getStoragedate() != null && compareTrust(this, e) < 0 ? d.getStoragedate() : storagedate; - - device = d.getDevice() != null && compareTrust(this, e) < 0 ? d.getDevice() : device; - - size = d.getSize() != null && compareTrust(this, e) < 0 ? d.getSize() : size; - - version = d.getVersion() != null && compareTrust(this, e) < 0 ? d.getVersion() : version; - - lastmetadataupdate = d.getLastmetadataupdate() != null && compareTrust(this, e) < 0 - ? d.getLastmetadataupdate() - : lastmetadataupdate; - - metadataversionnumber = d.getMetadataversionnumber() != null && compareTrust(this, e) < 0 - ? d.getMetadataversionnumber() - : metadataversionnumber; - - geolocation = mergeLists(geolocation, d.getGeolocation()); - - mergeOAFDataInfo(d); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Datasource.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Datasource.java deleted file mode 100644 index 721798206..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Datasource.java +++ /dev/null @@ -1,472 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; - -public class Datasource extends OafEntity implements Serializable { - - private Qualifier datasourcetype; - - private Qualifier openairecompatibility; - - private Field officialname; - - private Field englishname; - - private Field websiteurl; - - private Field logourl; - - private Field contactemail; - - private Field namespaceprefix; - - private Field latitude; - - private Field longitude; - - private Field dateofvalidation; - - private Field description; - - private List subjects; - - // opendoar specific fields (od*) - private Field odnumberofitems; - - private Field odnumberofitemsdate; - - private Field odpolicies; - - private List> odlanguages; - - private List> odcontenttypes; - - private List> accessinfopackage; - - // re3data fields - private Field releasestartdate; - - private Field releaseenddate; - - private Field missionstatementurl; - - private Field dataprovider; - - private Field serviceprovider; - - // {open, restricted or closed} - private Field databaseaccesstype; - - // {open, restricted or closed} - private Field datauploadtype; - - // {feeRequired, registration, other} - private Field databaseaccessrestriction; - - // {feeRequired, registration, other} - private Field datauploadrestriction; - - private Field versioning; - - private Field citationguidelineurl; - - // {yes, no, uknown} - private Field qualitymanagementkind; - - private Field pidsystems; - - private Field certificates; - - private List policies; - - private Journal journal; - - public Qualifier getDatasourcetype() { - return datasourcetype; - } - - public void setDatasourcetype(Qualifier datasourcetype) { - this.datasourcetype = datasourcetype; - } - - public Qualifier getOpenairecompatibility() { - return openairecompatibility; - } - - public void setOpenairecompatibility(Qualifier openairecompatibility) { - this.openairecompatibility = openairecompatibility; - } - - public Field getOfficialname() { - return officialname; - } - - public void setOfficialname(Field officialname) { - this.officialname = officialname; - } - - public Field getEnglishname() { - return englishname; - } - - public void setEnglishname(Field englishname) { - this.englishname = englishname; - } - - public Field getWebsiteurl() { - return websiteurl; - } - - public void setWebsiteurl(Field websiteurl) { - this.websiteurl = websiteurl; - } - - public Field getLogourl() { - return logourl; - } - - public void setLogourl(Field logourl) { - this.logourl = logourl; - } - - public Field getContactemail() { - return contactemail; - } - - public void setContactemail(Field contactemail) { - this.contactemail = contactemail; - } - - public Field getNamespaceprefix() { - return namespaceprefix; - } - - public void setNamespaceprefix(Field namespaceprefix) { - this.namespaceprefix = namespaceprefix; - } - - public Field getLatitude() { - return latitude; - } - - public void setLatitude(Field latitude) { - this.latitude = latitude; - } - - public Field getLongitude() { - return longitude; - } - - public void setLongitude(Field longitude) { - this.longitude = longitude; - } - - public Field getDateofvalidation() { - return dateofvalidation; - } - - public void setDateofvalidation(Field dateofvalidation) { - this.dateofvalidation = dateofvalidation; - } - - public Field getDescription() { - return description; - } - - public void setDescription(Field description) { - this.description = description; - } - - public List getSubjects() { - return subjects; - } - - public void setSubjects(List subjects) { - this.subjects = subjects; - } - - public Field getOdnumberofitems() { - return odnumberofitems; - } - - public void setOdnumberofitems(Field odnumberofitems) { - this.odnumberofitems = odnumberofitems; - } - - public Field getOdnumberofitemsdate() { - return odnumberofitemsdate; - } - - public void setOdnumberofitemsdate(Field odnumberofitemsdate) { - this.odnumberofitemsdate = odnumberofitemsdate; - } - - public Field getOdpolicies() { - return odpolicies; - } - - public void setOdpolicies(Field odpolicies) { - this.odpolicies = odpolicies; - } - - public List> getOdlanguages() { - return odlanguages; - } - - public void setOdlanguages(List> odlanguages) { - this.odlanguages = odlanguages; - } - - public List> getOdcontenttypes() { - return odcontenttypes; - } - - public void setOdcontenttypes(List> odcontenttypes) { - this.odcontenttypes = odcontenttypes; - } - - public List> getAccessinfopackage() { - return accessinfopackage; - } - - public void setAccessinfopackage(List> accessinfopackage) { - this.accessinfopackage = accessinfopackage; - } - - public Field getReleasestartdate() { - return releasestartdate; - } - - public void setReleasestartdate(Field releasestartdate) { - this.releasestartdate = releasestartdate; - } - - public Field getReleaseenddate() { - return releaseenddate; - } - - public void setReleaseenddate(Field releaseenddate) { - this.releaseenddate = releaseenddate; - } - - public Field getMissionstatementurl() { - return missionstatementurl; - } - - public void setMissionstatementurl(Field missionstatementurl) { - this.missionstatementurl = missionstatementurl; - } - - public Field getDataprovider() { - return dataprovider; - } - - public void setDataprovider(Field dataprovider) { - this.dataprovider = dataprovider; - } - - public Field getServiceprovider() { - return serviceprovider; - } - - public void setServiceprovider(Field serviceprovider) { - this.serviceprovider = serviceprovider; - } - - public Field getDatabaseaccesstype() { - return databaseaccesstype; - } - - public void setDatabaseaccesstype(Field databaseaccesstype) { - this.databaseaccesstype = databaseaccesstype; - } - - public Field getDatauploadtype() { - return datauploadtype; - } - - public void setDatauploadtype(Field datauploadtype) { - this.datauploadtype = datauploadtype; - } - - public Field getDatabaseaccessrestriction() { - return databaseaccessrestriction; - } - - public void setDatabaseaccessrestriction(Field databaseaccessrestriction) { - this.databaseaccessrestriction = databaseaccessrestriction; - } - - public Field getDatauploadrestriction() { - return datauploadrestriction; - } - - public void setDatauploadrestriction(Field datauploadrestriction) { - this.datauploadrestriction = datauploadrestriction; - } - - public Field getVersioning() { - return versioning; - } - - public void setVersioning(Field versioning) { - this.versioning = versioning; - } - - public Field getCitationguidelineurl() { - return citationguidelineurl; - } - - public void setCitationguidelineurl(Field citationguidelineurl) { - this.citationguidelineurl = citationguidelineurl; - } - - public Field getQualitymanagementkind() { - return qualitymanagementkind; - } - - public void setQualitymanagementkind(Field qualitymanagementkind) { - this.qualitymanagementkind = qualitymanagementkind; - } - - public Field getPidsystems() { - return pidsystems; - } - - public void setPidsystems(Field pidsystems) { - this.pidsystems = pidsystems; - } - - public Field getCertificates() { - return certificates; - } - - public void setCertificates(Field certificates) { - this.certificates = certificates; - } - - public List getPolicies() { - return policies; - } - - public void setPolicies(List policies) { - this.policies = policies; - } - - public Journal getJournal() { - return journal; - } - - public void setJournal(Journal journal) { - this.journal = journal; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - if (!Datasource.class.isAssignableFrom(e.getClass())) { - return; - } - - Datasource d = (Datasource) e; - - datasourcetype = d.getDatasourcetype() != null && compareTrust(this, e) < 0 - ? d.getDatasourcetype() - : datasourcetype; - openairecompatibility = d.getOpenairecompatibility() != null && compareTrust(this, e) < 0 - ? d.getOpenairecompatibility() - : openairecompatibility; - officialname = d.getOfficialname() != null && compareTrust(this, e) < 0 - ? d.getOfficialname() - : officialname; - englishname = d.getEnglishname() != null && compareTrust(this, e) < 0 ? d.getEnglishname() : officialname; - websiteurl = d.getWebsiteurl() != null && compareTrust(this, e) < 0 ? d.getWebsiteurl() : websiteurl; - logourl = d.getLogourl() != null && compareTrust(this, e) < 0 ? d.getLogourl() : getLogourl(); - contactemail = d.getContactemail() != null && compareTrust(this, e) < 0 - ? d.getContactemail() - : contactemail; - namespaceprefix = d.getNamespaceprefix() != null && compareTrust(this, e) < 0 - ? d.getNamespaceprefix() - : namespaceprefix; - latitude = d.getLatitude() != null && compareTrust(this, e) < 0 ? d.getLatitude() : latitude; - longitude = d.getLongitude() != null && compareTrust(this, e) < 0 ? d.getLongitude() : longitude; - dateofvalidation = d.getDateofvalidation() != null && compareTrust(this, e) < 0 - ? d.getDateofvalidation() - : dateofvalidation; - description = d.getDescription() != null && compareTrust(this, e) < 0 ? d.getDescription() : description; - subjects = mergeLists(subjects, d.getSubjects()); - - // opendoar specific fields (od*) - odnumberofitems = d.getOdnumberofitems() != null && compareTrust(this, e) < 0 - ? d.getOdnumberofitems() - : odnumberofitems; - odnumberofitemsdate = d.getOdnumberofitemsdate() != null && compareTrust(this, e) < 0 - ? d.getOdnumberofitemsdate() - : odnumberofitemsdate; - odpolicies = d.getOdpolicies() != null && compareTrust(this, e) < 0 ? d.getOdpolicies() : odpolicies; - odlanguages = mergeLists(odlanguages, d.getOdlanguages()); - odcontenttypes = mergeLists(odcontenttypes, d.getOdcontenttypes()); - accessinfopackage = mergeLists(accessinfopackage, d.getAccessinfopackage()); - - // re3data fields - releasestartdate = d.getReleasestartdate() != null && compareTrust(this, e) < 0 - ? d.getReleasestartdate() - : releasestartdate; - releaseenddate = d.getReleaseenddate() != null && compareTrust(this, e) < 0 - ? d.getReleaseenddate() - : releaseenddate; - missionstatementurl = d.getMissionstatementurl() != null && compareTrust(this, e) < 0 - ? d.getMissionstatementurl() - : missionstatementurl; - dataprovider = d.getDataprovider() != null && compareTrust(this, e) < 0 - ? d.getDataprovider() - : dataprovider; - serviceprovider = d.getServiceprovider() != null && compareTrust(this, e) < 0 - ? d.getServiceprovider() - : serviceprovider; - - // {open, restricted or closed} - databaseaccesstype = d.getDatabaseaccesstype() != null && compareTrust(this, e) < 0 - ? d.getDatabaseaccesstype() - : databaseaccesstype; - - // {open, restricted or closed} - datauploadtype = d.getDatauploadtype() != null && compareTrust(this, e) < 0 - ? d.getDatauploadtype() - : datauploadtype; - - // {feeRequired, registration, other} - databaseaccessrestriction = d.getDatabaseaccessrestriction() != null && compareTrust(this, e) < 0 - ? d.getDatabaseaccessrestriction() - : databaseaccessrestriction; - - // {feeRequired, registration, other} - datauploadrestriction = d.getDatauploadrestriction() != null && compareTrust(this, e) < 0 - ? d.getDatauploadrestriction() - : datauploadrestriction; - - versioning = d.getVersioning() != null && compareTrust(this, e) < 0 ? d.getVersioning() : versioning; - citationguidelineurl = d.getCitationguidelineurl() != null && compareTrust(this, e) < 0 - ? d.getCitationguidelineurl() - : citationguidelineurl; - - // {yes, no, unknown} - qualitymanagementkind = d.getQualitymanagementkind() != null && compareTrust(this, e) < 0 - ? d.getQualitymanagementkind() - : qualitymanagementkind; - pidsystems = d.getPidsystems() != null && compareTrust(this, e) < 0 ? d.getPidsystems() : pidsystems; - - certificates = d.getCertificates() != null && compareTrust(this, e) < 0 - ? d.getCertificates() - : certificates; - - policies = mergeLists(policies, d.getPolicies()); - - journal = d.getJournal() != null && compareTrust(this, e) < 0 ? d.getJournal() : journal; - - mergeOAFDataInfo(e); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/ExternalReference.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/ExternalReference.java deleted file mode 100644 index 0689b44c5..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/ExternalReference.java +++ /dev/null @@ -1,120 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; -import java.util.Objects; - -public class ExternalReference implements Serializable { - // source - private String sitename; - - // title - private String label; - - // alternative labels - private List alternateLabel; - - // text() - private String url; - - // type - private Qualifier qualifier; - - // site internal identifier - private String refidentifier; - - // maps the oaf:reference/@query attribute - private String query; - - // ExternalReferences might be also inferred - private DataInfo dataInfo; - - public String getSitename() { - return sitename; - } - - public void setSitename(String sitename) { - this.sitename = sitename; - } - - public String getLabel() { - return label; - } - - public void setLabel(String label) { - this.label = label; - } - - public List getAlternateLabel() { - return alternateLabel; - } - - public void setAlternateLabel(List alternateLabel) { - this.alternateLabel = alternateLabel; - } - - public String getUrl() { - return url; - } - - public void setUrl(String url) { - this.url = url; - } - - public Qualifier getQualifier() { - return qualifier; - } - - public void setQualifier(Qualifier qualifier) { - this.qualifier = qualifier; - } - - public String getRefidentifier() { - return refidentifier; - } - - public void setRefidentifier(String refidentifier) { - this.refidentifier = refidentifier; - } - - public String getQuery() { - return query; - } - - public void setQuery(String query) { - this.query = query; - } - - public DataInfo getDataInfo() { - return dataInfo; - } - - public void setDataInfo(DataInfo dataInfo) { - this.dataInfo = dataInfo; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - ExternalReference that = (ExternalReference) o; - return Objects.equals(sitename, that.sitename) - && Objects.equals(label, that.label) - && Objects.equals(url, that.url) - && Objects.equals(qualifier, that.qualifier) - && Objects.equals(refidentifier, that.refidentifier) - && Objects.equals(query, that.query) - && Objects.equals(dataInfo, that.dataInfo); - } - - @Override - public int hashCode() { - return Objects - .hash( - sitename, label, url, qualifier, refidentifier, query, dataInfo); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/ExtraInfo.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/ExtraInfo.java deleted file mode 100644 index 3682cc2aa..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/ExtraInfo.java +++ /dev/null @@ -1,77 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Objects; - -public class ExtraInfo implements Serializable { - private String name; - - private String typology; - - private String provenance; - - private String trust; - - // json containing a Citation or Statistics - private String value; - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public String getTypology() { - return typology; - } - - public void setTypology(String typology) { - this.typology = typology; - } - - public String getProvenance() { - return provenance; - } - - public void setProvenance(String provenance) { - this.provenance = provenance; - } - - public String getTrust() { - return trust; - } - - public void setTrust(String trust) { - this.trust = trust; - } - - public String getValue() { - return value; - } - - public void setValue(String value) { - this.value = value; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - ExtraInfo extraInfo = (ExtraInfo) o; - return Objects.equals(name, extraInfo.name) - && Objects.equals(typology, extraInfo.typology) - && Objects.equals(provenance, extraInfo.provenance) - && Objects.equals(trust, extraInfo.trust) - && Objects.equals(value, extraInfo.value); - } - - @Override - public int hashCode() { - return Objects.hash(name, typology, provenance, trust, value); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Field.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Field.java deleted file mode 100644 index 8358bc4b3..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Field.java +++ /dev/null @@ -1,45 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Objects; - -public class Field implements Serializable { - - private T value; - - private DataInfo dataInfo; - - public T getValue() { - return value; - } - - public void setValue(T value) { - this.value = value; - } - - public DataInfo getDataInfo() { - return dataInfo; - } - - public void setDataInfo(DataInfo dataInfo) { - this.dataInfo = dataInfo; - } - - @Override - public int hashCode() { - return getValue() == null ? 0 : getValue().hashCode(); - } - - @Override - public boolean equals(Object obj) { - if (this == obj) - return true; - if (obj == null) - return false; - if (getClass() != obj.getClass()) - return false; - Field other = (Field) obj; - return Objects.equals(getValue(), other.getValue()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/GeoLocation.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/GeoLocation.java deleted file mode 100644 index 7ed313a59..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/GeoLocation.java +++ /dev/null @@ -1,76 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; - -import org.apache.commons.lang3.StringUtils; - -import com.fasterxml.jackson.annotation.JsonIgnore; - -public class GeoLocation implements Serializable { - - private String point; - - private String box; - - private String place; - - public String getPoint() { - return point; - } - - public void setPoint(String point) { - this.point = point; - } - - public String getBox() { - return box; - } - - public void setBox(String box) { - this.box = box; - } - - public String getPlace() { - return place; - } - - public void setPlace(String place) { - this.place = place; - } - - @JsonIgnore - public boolean isBlank() { - return StringUtils.isBlank(point) && StringUtils.isBlank(box) && StringUtils.isBlank(place); - } - - public String toComparableString() { - return isBlank() - ? "" - : String - .format( - "%s::%s%s", - point != null ? point.toLowerCase() : "", - box != null ? box.toLowerCase() : "", - place != null ? place.toLowerCase() : ""); - } - - @Override - public int hashCode() { - return toComparableString().hashCode(); - } - - @Override - public boolean equals(Object obj) { - if (this == obj) - return true; - if (obj == null) - return false; - if (getClass() != obj.getClass()) - return false; - - GeoLocation other = (GeoLocation) obj; - - return toComparableString().equals(other.toComparableString()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/H2020Classification.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/H2020Classification.java deleted file mode 100644 index 219bdc00d..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/H2020Classification.java +++ /dev/null @@ -1,88 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Objects; - -/** - * To store information about the classification for the project. The classification depends on the programme. For example - * H2020-EU.3.4.5.3 can be classified as - * H2020-EU.3. => Societal Challenges (level1) - * H2020-EU.3.4. => Transport (level2) - * H2020-EU.3.4.5. => CLEANSKY2 (level3) - * H2020-EU.3.4.5.3. => IADP Fast Rotorcraft (level4) - * - * We decided to explicitly represent up to three levels in the classification. - * - * H2020Classification has the following parameters: - * - private Programme programme to store the information about the programme related to this classification - * - private String level1 to store the information about the level 1 of the classification (Priority or Pillar of the EC) - * - private String level2 to store the information about the level2 af the classification (Objectives (?)) - * - private String level3 to store the information about the level3 of the classification - * - private String classification to store the entire classification related to the programme - */ - -public class H2020Classification implements Serializable { - private H2020Programme h2020Programme; - private String level1; - private String level2; - private String level3; - - private String classification; - - public H2020Programme getH2020Programme() { - return h2020Programme; - } - - public void setH2020Programme(H2020Programme h2020Programme) { - this.h2020Programme = h2020Programme; - } - - public String getLevel1() { - return level1; - } - - public void setLevel1(String level1) { - this.level1 = level1; - } - - public String getLevel2() { - return level2; - } - - public void setLevel2(String level2) { - this.level2 = level2; - } - - public String getLevel3() { - return level3; - } - - public void setLevel3(String level3) { - this.level3 = level3; - } - - public String getClassification() { - return classification; - } - - public void setClassification(String classification) { - this.classification = classification; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - - H2020Classification h2020classification = (H2020Classification) o; - - return Objects.equals(level1, h2020classification.level1) && - Objects.equals(level2, h2020classification.level2) && - Objects.equals(level3, h2020classification.level3) && - Objects.equals(classification, h2020classification.classification) && - h2020Programme.equals(h2020classification.h2020Programme); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/H2020Programme.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/H2020Programme.java deleted file mode 100644 index 101d46d35..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/H2020Programme.java +++ /dev/null @@ -1,44 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Objects; - -/** - * To store information about the ec programme for the project. It has the following parameters: - * - private String code to store the code of the programme - * - private String description to store the description of the programme - */ - -public class H2020Programme implements Serializable { - private String code; - private String description; - - public String getCode() { - return code; - } - - public void setCode(String code) { - this.code = code; - } - - public String getDescription() { - return description; - } - - public void setDescription(String description) { - this.description = description; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - - H2020Programme h2020Programme = (H2020Programme) o; - return Objects.equals(code, h2020Programme.code); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Instance.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Instance.java deleted file mode 100644 index c4cde0c2a..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Instance.java +++ /dev/null @@ -1,173 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; - -public class Instance implements Serializable { - - private Field license; - - private AccessRight accessright; - - private Qualifier instancetype; - - private KeyValue hostedby; - - private List url; - - // other research products specifc - private String distributionlocation; - - private KeyValue collectedfrom; - - private List pid; - - private List alternateIdentifier; - - private Field dateofacceptance; - - // ( article | book ) processing charges. Defined here to cope with possible wrongly typed - // results - private Field processingchargeamount; - - // currency - alphabetic code describe in ISO-4217. Defined here to cope with possible wrongly - // typed results - private Field processingchargecurrency; - - private Qualifier refereed; // peer-review status - - public Field getLicense() { - return license; - } - - public void setLicense(Field license) { - this.license = license; - } - - public AccessRight getAccessright() { - return accessright; - } - - public void setAccessright(AccessRight accessright) { - this.accessright = accessright; - } - - public Qualifier getInstancetype() { - return instancetype; - } - - public void setInstancetype(Qualifier instancetype) { - this.instancetype = instancetype; - } - - public KeyValue getHostedby() { - return hostedby; - } - - public void setHostedby(KeyValue hostedby) { - this.hostedby = hostedby; - } - - public List getUrl() { - return url; - } - - public void setUrl(List url) { - this.url = url; - } - - public String getDistributionlocation() { - return distributionlocation; - } - - public void setDistributionlocation(String distributionlocation) { - this.distributionlocation = distributionlocation; - } - - public KeyValue getCollectedfrom() { - return collectedfrom; - } - - public void setCollectedfrom(KeyValue collectedfrom) { - this.collectedfrom = collectedfrom; - } - - public List getPid() { - return pid; - } - - public void setPid(List pid) { - this.pid = pid; - } - - public Field getDateofacceptance() { - return dateofacceptance; - } - - public void setDateofacceptance(Field dateofacceptance) { - this.dateofacceptance = dateofacceptance; - } - - public List getAlternateIdentifier() { - return alternateIdentifier; - } - - public void setAlternateIdentifier(List alternateIdentifier) { - this.alternateIdentifier = alternateIdentifier; - } - - public Field getProcessingchargeamount() { - return processingchargeamount; - } - - public void setProcessingchargeamount(Field processingchargeamount) { - this.processingchargeamount = processingchargeamount; - } - - public Field getProcessingchargecurrency() { - return processingchargecurrency; - } - - public void setProcessingchargecurrency(Field processingchargecurrency) { - this.processingchargecurrency = processingchargecurrency; - } - - public Qualifier getRefereed() { - return refereed; - } - - public void setRefereed(Qualifier refereed) { - this.refereed = refereed; - } - - public String toComparableString() { - return String - .format( - "%s::%s::%s::%s", - hostedby != null && hostedby.getKey() != null ? hostedby.getKey().toLowerCase() : "", - accessright != null && accessright.getClassid() != null ? accessright.getClassid() : "", - instancetype != null && instancetype.getClassid() != null ? instancetype.getClassid() : "", - url != null ? url : ""); - } - - @Override - public int hashCode() { - return toComparableString().hashCode(); - } - - @Override - public boolean equals(Object obj) { - if (this == obj) - return true; - if (obj == null) - return false; - if (getClass() != obj.getClass()) - return false; - - Instance other = (Instance) obj; - - return toComparableString().equals(other.toComparableString()); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Journal.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Journal.java deleted file mode 100644 index 7a375e28b..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Journal.java +++ /dev/null @@ -1,167 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Objects; - -public class Journal implements Serializable { - - private String name; - - private String issnPrinted; - - private String issnOnline; - - private String issnLinking; - - private String ep; - - private String iss; - - private String sp; - - private String vol; - - private String edition; - - private String conferenceplace; - - private String conferencedate; - - private DataInfo dataInfo; - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public String getIssnPrinted() { - return issnPrinted; - } - - public void setIssnPrinted(String issnPrinted) { - this.issnPrinted = issnPrinted; - } - - public String getIssnOnline() { - return issnOnline; - } - - public void setIssnOnline(String issnOnline) { - this.issnOnline = issnOnline; - } - - public String getIssnLinking() { - return issnLinking; - } - - public void setIssnLinking(String issnLinking) { - this.issnLinking = issnLinking; - } - - public String getEp() { - return ep; - } - - public void setEp(String ep) { - this.ep = ep; - } - - public String getIss() { - return iss; - } - - public void setIss(String iss) { - this.iss = iss; - } - - public String getSp() { - return sp; - } - - public void setSp(String sp) { - this.sp = sp; - } - - public String getVol() { - return vol; - } - - public void setVol(String vol) { - this.vol = vol; - } - - public String getEdition() { - return edition; - } - - public void setEdition(String edition) { - this.edition = edition; - } - - public String getConferenceplace() { - return conferenceplace; - } - - public void setConferenceplace(String conferenceplace) { - this.conferenceplace = conferenceplace; - } - - public String getConferencedate() { - return conferencedate; - } - - public void setConferencedate(String conferencedate) { - this.conferencedate = conferencedate; - } - - public DataInfo getDataInfo() { - return dataInfo; - } - - public void setDataInfo(DataInfo dataInfo) { - this.dataInfo = dataInfo; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - Journal journal = (Journal) o; - return Objects.equals(name, journal.name) - && Objects.equals(issnPrinted, journal.issnPrinted) - && Objects.equals(issnOnline, journal.issnOnline) - && Objects.equals(issnLinking, journal.issnLinking) - && Objects.equals(ep, journal.ep) - && Objects.equals(iss, journal.iss) - && Objects.equals(sp, journal.sp) - && Objects.equals(vol, journal.vol) - && Objects.equals(edition, journal.edition) - && Objects.equals(conferenceplace, journal.conferenceplace) - && Objects.equals(conferencedate, journal.conferencedate) - && Objects.equals(dataInfo, journal.dataInfo); - } - - @Override - public int hashCode() { - return Objects - .hash( - name, - issnPrinted, - issnOnline, - issnLinking, - ep, - iss, - sp, - vol, - edition, - conferenceplace, - conferencedate, - dataInfo); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/KeyValue.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/KeyValue.java deleted file mode 100644 index 4e2d60138..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/KeyValue.java +++ /dev/null @@ -1,74 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; - -import org.apache.commons.lang3.StringUtils; - -import com.fasterxml.jackson.annotation.JsonIgnore; - -public class KeyValue implements Serializable { - - private String key; - - private String value; - - private DataInfo dataInfo; - - public String getKey() { - return key; - } - - public void setKey(String key) { - this.key = key; - } - - public String getValue() { - return value; - } - - public void setValue(String value) { - this.value = value; - } - - public DataInfo getDataInfo() { - return dataInfo; - } - - public void setDataInfo(DataInfo dataInfo) { - this.dataInfo = dataInfo; - } - - public String toComparableString() { - return isBlank() - ? "" - : String - .format( - "%s::%s", - key != null ? key.toLowerCase() : "", value != null ? value.toLowerCase() : ""); - } - - @JsonIgnore - public boolean isBlank() { - return StringUtils.isBlank(key) && StringUtils.isBlank(value); - } - - @Override - public int hashCode() { - return toComparableString().hashCode(); - } - - @Override - public boolean equals(Object obj) { - if (this == obj) - return true; - if (obj == null) - return false; - if (getClass() != obj.getClass()) - return false; - - KeyValue other = (KeyValue) obj; - - return toComparableString().equals(other.toComparableString()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Measure.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Measure.java deleted file mode 100644 index c0c14d10d..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Measure.java +++ /dev/null @@ -1,59 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.util.List; - -import com.google.common.base.Objects; - -/** - * Represent a measure, must be further described by a system available resource providing name and descriptions. - */ -public class Measure { - - /** - * Unique measure identifier. - */ - private String id; - - /** - * List of units associated with this measure. KeyValue provides a pair to store the laber (key) and the value, plus - * common provenance information. - */ - private List unit; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public List getUnit() { - return unit; - } - - public void setUnit(List unit) { - this.unit = unit; - } - - public void mergeFrom(Measure m) { - // TODO - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - Measure measure = (Measure) o; - return Objects.equal(id, measure.id) && - Objects.equal(unit, measure.unit); - } - - @Override - public int hashCode() { - return Objects.hashCode(id, unit); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OAIProvenance.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OAIProvenance.java deleted file mode 100644 index 88d74afbf..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OAIProvenance.java +++ /dev/null @@ -1,33 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Objects; - -public class OAIProvenance implements Serializable { - - private OriginDescription originDescription; - - public OriginDescription getOriginDescription() { - return originDescription; - } - - public void setOriginDescription(OriginDescription originDescription) { - this.originDescription = originDescription; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - OAIProvenance that = (OAIProvenance) o; - return Objects.equals(originDescription, that.originDescription); - } - - @Override - public int hashCode() { - return Objects.hash(originDescription); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Oaf.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Oaf.java deleted file mode 100644 index 494123fdf..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Oaf.java +++ /dev/null @@ -1,102 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Collection; -import java.util.List; -import java.util.Objects; -import java.util.Optional; -import java.util.stream.Collectors; -import java.util.stream.Stream; - -public abstract class Oaf implements Serializable { - - /** - * The list of datasource id/name pairs providing this relationship. - */ - protected List collectedfrom; - - private DataInfo dataInfo; - - private Long lastupdatetimestamp; - - public List getCollectedfrom() { - return collectedfrom; - } - - public void setCollectedfrom(List collectedfrom) { - this.collectedfrom = collectedfrom; - } - - public DataInfo getDataInfo() { - return dataInfo; - } - - public void setDataInfo(DataInfo dataInfo) { - this.dataInfo = dataInfo; - } - - public Long getLastupdatetimestamp() { - return lastupdatetimestamp; - } - - public void setLastupdatetimestamp(Long lastupdatetimestamp) { - this.lastupdatetimestamp = lastupdatetimestamp; - } - - public void mergeFrom(Oaf o) { - if (Objects.isNull(o)) { - return; - } - setCollectedfrom( - Stream - .concat( - Optional - .ofNullable(getCollectedfrom()) - .map(Collection::stream) - .orElse(Stream.empty()), - Optional - .ofNullable(o.getCollectedfrom()) - .map(Collection::stream) - .orElse(Stream.empty())) - .distinct() // relies on KeyValue.equals - .collect(Collectors.toList())); - - setLastupdatetimestamp( - Math - .max( - Optional.ofNullable(getLastupdatetimestamp()).orElse(0L), - Optional.ofNullable(o.getLastupdatetimestamp()).orElse(0L))); - } - - public void mergeOAFDataInfo(Oaf o) { - if (o.getDataInfo() != null && compareTrust(this, o) < 0) - dataInfo = o.getDataInfo(); - } - - protected String extractTrust(Oaf e) { - if (e == null || e.getDataInfo() == null || e.getDataInfo().getTrust() == null) - return "0.0"; - return e.getDataInfo().getTrust(); - } - - protected int compareTrust(Oaf a, Oaf b) { - return extractTrust(a).compareTo(extractTrust(b)); - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - Oaf oaf = (Oaf) o; - return Objects.equals(getDataInfo(), oaf.getDataInfo()) - && Objects.equals(lastupdatetimestamp, oaf.lastupdatetimestamp); - } - - @Override - public int hashCode() { - return Objects.hash(dataInfo, lastupdatetimestamp); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OafEntity.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OafEntity.java deleted file mode 100644 index 17c3e6bdd..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OafEntity.java +++ /dev/null @@ -1,126 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.*; -import java.util.stream.Collectors; - -public abstract class OafEntity extends Oaf implements Serializable { - - private String id; - - private List originalId; - - private List pid; - - private String dateofcollection; - - private String dateoftransformation; - - private List extraInfo; - - private OAIProvenance oaiprovenance; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public List getOriginalId() { - return originalId; - } - - public void setOriginalId(List originalId) { - this.originalId = originalId; - } - - public List getPid() { - return pid; - } - - public void setPid(List pid) { - this.pid = pid; - } - - public String getDateofcollection() { - return dateofcollection; - } - - public void setDateofcollection(String dateofcollection) { - this.dateofcollection = dateofcollection; - } - - public String getDateoftransformation() { - return dateoftransformation; - } - - public void setDateoftransformation(String dateoftransformation) { - this.dateoftransformation = dateoftransformation; - } - - public List getExtraInfo() { - return extraInfo; - } - - public void setExtraInfo(List extraInfo) { - this.extraInfo = extraInfo; - } - - public OAIProvenance getOaiprovenance() { - return oaiprovenance; - } - - public void setOaiprovenance(OAIProvenance oaiprovenance) { - this.oaiprovenance = oaiprovenance; - } - - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - originalId = mergeLists(originalId, e.getOriginalId()); - - pid = mergeLists(pid, e.getPid()); - - if (e.getDateofcollection() != null && compareTrust(this, e) < 0) - dateofcollection = e.getDateofcollection(); - - if (e.getDateoftransformation() != null && compareTrust(this, e) < 0) - dateoftransformation = e.getDateoftransformation(); - - extraInfo = mergeLists(extraInfo, e.getExtraInfo()); - - if (e.getOaiprovenance() != null && compareTrust(this, e) < 0) - oaiprovenance = e.getOaiprovenance(); - } - - protected List mergeLists(final List... lists) { - - return Arrays - .stream(lists) - .filter(Objects::nonNull) - .flatMap(List::stream) - .filter(Objects::nonNull) - .distinct() - .collect(Collectors.toList()); - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - if (!super.equals(o)) - return false; - OafEntity oafEntity = (OafEntity) o; - return Objects.equals(id, oafEntity.id); - } - - @Override - public int hashCode() { - return Objects.hash(super.hashCode(), id); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Organization.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Organization.java deleted file mode 100644 index a5f9bce30..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Organization.java +++ /dev/null @@ -1,214 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; - -public class Organization extends OafEntity implements Serializable { - - private Field legalshortname; - - private Field legalname; - - private List> alternativeNames; - - private Field websiteurl; - - private Field logourl; - - private Field eclegalbody; - - private Field eclegalperson; - - private Field ecnonprofit; - - private Field ecresearchorganization; - - private Field echighereducation; - - private Field ecinternationalorganizationeurinterests; - - private Field ecinternationalorganization; - - private Field ecenterprise; - - private Field ecsmevalidated; - - private Field ecnutscode; - - private Qualifier country; - - public Field getLegalshortname() { - return legalshortname; - } - - public void setLegalshortname(Field legalshortname) { - this.legalshortname = legalshortname; - } - - public Field getLegalname() { - return legalname; - } - - public void setLegalname(Field legalname) { - this.legalname = legalname; - } - - public List> getAlternativeNames() { - return alternativeNames; - } - - public void setAlternativeNames(List> alternativeNames) { - this.alternativeNames = alternativeNames; - } - - public Field getWebsiteurl() { - return websiteurl; - } - - public void setWebsiteurl(Field websiteurl) { - this.websiteurl = websiteurl; - } - - public Field getLogourl() { - return logourl; - } - - public void setLogourl(Field logourl) { - this.logourl = logourl; - } - - public Field getEclegalbody() { - return eclegalbody; - } - - public void setEclegalbody(Field eclegalbody) { - this.eclegalbody = eclegalbody; - } - - public Field getEclegalperson() { - return eclegalperson; - } - - public void setEclegalperson(Field eclegalperson) { - this.eclegalperson = eclegalperson; - } - - public Field getEcnonprofit() { - return ecnonprofit; - } - - public void setEcnonprofit(Field ecnonprofit) { - this.ecnonprofit = ecnonprofit; - } - - public Field getEcresearchorganization() { - return ecresearchorganization; - } - - public void setEcresearchorganization(Field ecresearchorganization) { - this.ecresearchorganization = ecresearchorganization; - } - - public Field getEchighereducation() { - return echighereducation; - } - - public void setEchighereducation(Field echighereducation) { - this.echighereducation = echighereducation; - } - - public Field getEcinternationalorganizationeurinterests() { - return ecinternationalorganizationeurinterests; - } - - public void setEcinternationalorganizationeurinterests( - Field ecinternationalorganizationeurinterests) { - this.ecinternationalorganizationeurinterests = ecinternationalorganizationeurinterests; - } - - public Field getEcinternationalorganization() { - return ecinternationalorganization; - } - - public void setEcinternationalorganization(Field ecinternationalorganization) { - this.ecinternationalorganization = ecinternationalorganization; - } - - public Field getEcenterprise() { - return ecenterprise; - } - - public void setEcenterprise(Field ecenterprise) { - this.ecenterprise = ecenterprise; - } - - public Field getEcsmevalidated() { - return ecsmevalidated; - } - - public void setEcsmevalidated(Field ecsmevalidated) { - this.ecsmevalidated = ecsmevalidated; - } - - public Field getEcnutscode() { - return ecnutscode; - } - - public void setEcnutscode(Field ecnutscode) { - this.ecnutscode = ecnutscode; - } - - public Qualifier getCountry() { - return country; - } - - public void setCountry(Qualifier country) { - this.country = country; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - if (!Organization.class.isAssignableFrom(e.getClass())) { - return; - } - - final Organization o = (Organization) e; - legalshortname = o.getLegalshortname() != null && compareTrust(this, e) < 0 - ? o.getLegalshortname() - : legalshortname; - legalname = o.getLegalname() != null && compareTrust(this, e) < 0 ? o.getLegalname() : legalname; - alternativeNames = mergeLists(o.getAlternativeNames(), alternativeNames); - websiteurl = o.getWebsiteurl() != null && compareTrust(this, e) < 0 ? o.getWebsiteurl() : websiteurl; - logourl = o.getLogourl() != null && compareTrust(this, e) < 0 ? o.getLogourl() : logourl; - eclegalbody = o.getEclegalbody() != null && compareTrust(this, e) < 0 ? o.getEclegalbody() : eclegalbody; - eclegalperson = o.getEclegalperson() != null && compareTrust(this, e) < 0 - ? o.getEclegalperson() - : eclegalperson; - ecnonprofit = o.getEcnonprofit() != null && compareTrust(this, e) < 0 ? o.getEcnonprofit() : ecnonprofit; - ecresearchorganization = o.getEcresearchorganization() != null && compareTrust(this, e) < 0 - ? o.getEcresearchorganization() - : ecresearchorganization; - echighereducation = o.getEchighereducation() != null && compareTrust(this, e) < 0 - ? o.getEchighereducation() - : echighereducation; - ecinternationalorganizationeurinterests = o.getEcinternationalorganizationeurinterests() != null - && compareTrust(this, e) < 0 - ? o.getEcinternationalorganizationeurinterests() - : ecinternationalorganizationeurinterests; - ecinternationalorganization = o.getEcinternationalorganization() != null && compareTrust(this, e) < 0 - ? o.getEcinternationalorganization() - : ecinternationalorganization; - ecenterprise = o.getEcenterprise() != null && compareTrust(this, e) < 0 - ? o.getEcenterprise() - : ecenterprise; - ecsmevalidated = o.getEcsmevalidated() != null && compareTrust(this, e) < 0 - ? o.getEcsmevalidated() - : ecsmevalidated; - ecnutscode = o.getEcnutscode() != null && compareTrust(this, e) < 0 ? o.getEcnutscode() : ecnutscode; - country = o.getCountry() != null && compareTrust(this, e) < 0 ? o.getCountry() : country; - mergeOAFDataInfo(o); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OriginDescription.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OriginDescription.java deleted file mode 100644 index a275fc1a9..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OriginDescription.java +++ /dev/null @@ -1,88 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Objects; - -public class OriginDescription implements Serializable { - - private String harvestDate; - - private Boolean altered = true; - - private String baseURL; - - private String identifier; - - private String datestamp; - - private String metadataNamespace; - - public String getHarvestDate() { - return harvestDate; - } - - public void setHarvestDate(String harvestDate) { - this.harvestDate = harvestDate; - } - - public Boolean getAltered() { - return altered; - } - - public void setAltered(Boolean altered) { - this.altered = altered; - } - - public String getBaseURL() { - return baseURL; - } - - public void setBaseURL(String baseURL) { - this.baseURL = baseURL; - } - - public String getIdentifier() { - return identifier; - } - - public void setIdentifier(String identifier) { - this.identifier = identifier; - } - - public String getDatestamp() { - return datestamp; - } - - public void setDatestamp(String datestamp) { - this.datestamp = datestamp; - } - - public String getMetadataNamespace() { - return metadataNamespace; - } - - public void setMetadataNamespace(String metadataNamespace) { - this.metadataNamespace = metadataNamespace; - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - OriginDescription that = (OriginDescription) o; - return Objects.equals(harvestDate, that.harvestDate) - && Objects.equals(altered, that.altered) - && Objects.equals(baseURL, that.baseURL) - && Objects.equals(identifier, that.identifier) - && Objects.equals(datestamp, that.datestamp) - && Objects.equals(metadataNamespace, that.metadataNamespace); - } - - @Override - public int hashCode() { - return Objects.hash(harvestDate, altered, baseURL, identifier, datestamp, metadataNamespace); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java deleted file mode 100644 index b04934c23..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java +++ /dev/null @@ -1,60 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; - -import eu.dnetlib.dhp.schema.common.ModelConstants; - -public class OtherResearchProduct extends Result implements Serializable { - - private List> contactperson; - - private List> contactgroup; - - private List> tool; - - public OtherResearchProduct() { - setResulttype(ModelConstants.ORP_DEFAULT_RESULTTYPE); - } - - public List> getContactperson() { - return contactperson; - } - - public void setContactperson(List> contactperson) { - this.contactperson = contactperson; - } - - public List> getContactgroup() { - return contactgroup; - } - - public void setContactgroup(List> contactgroup) { - this.contactgroup = contactgroup; - } - - public List> getTool() { - return tool; - } - - public void setTool(List> tool) { - this.tool = tool; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - if (!OtherResearchProduct.class.isAssignableFrom(e.getClass())) { - return; - } - - OtherResearchProduct o = (OtherResearchProduct) e; - - contactperson = mergeLists(contactperson, o.getContactperson()); - contactgroup = mergeLists(contactgroup, o.getContactgroup()); - tool = mergeLists(tool, o.getTool()); - mergeOAFDataInfo(e); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Project.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Project.java deleted file mode 100644 index 4be4d5d30..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Project.java +++ /dev/null @@ -1,358 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; - -public class Project extends OafEntity implements Serializable { - - private Field websiteurl; - - private Field code; - - private Field acronym; - - private Field title; - - private Field startdate; - - private Field enddate; - - private Field callidentifier; - - private Field keywords; - - private Field duration; - - private Field ecsc39; - - private Field oamandatepublications; - - private Field ecarticle29_3; - - private List subjects; - - private List> fundingtree; - - private Qualifier contracttype; - - private Field optional1; - - private Field optional2; - - private Field jsonextrainfo; - - private Field contactfullname; - - private Field contactfax; - - private Field contactphone; - - private Field contactemail; - - private Field summary; - - private Field currency; - - private Float totalcost; - - private Float fundedamount; - - private String h2020topiccode; - - private String h2020topicdescription; - - private List h2020classification; - - public String getH2020topicdescription() { - return h2020topicdescription; - } - - public void setH2020topicdescription(String h2020topicdescription) { - this.h2020topicdescription = h2020topicdescription; - } - - public String getH2020topiccode() { - return h2020topiccode; - } - - public void setH2020topiccode(String h2020topiccode) { - this.h2020topiccode = h2020topiccode; - } - - public List getH2020classification() { - return h2020classification; - } - - public void setH2020classification(List h2020classification) { - this.h2020classification = h2020classification; - } - - public Field getWebsiteurl() { - return websiteurl; - } - - public void setWebsiteurl(Field websiteurl) { - this.websiteurl = websiteurl; - } - - public Field getCode() { - return code; - } - - public void setCode(Field code) { - this.code = code; - } - - public Field getAcronym() { - return acronym; - } - - public void setAcronym(Field acronym) { - this.acronym = acronym; - } - - public Field getTitle() { - return title; - } - - public void setTitle(Field title) { - this.title = title; - } - - public Field getStartdate() { - return startdate; - } - - public void setStartdate(Field startdate) { - this.startdate = startdate; - } - - public Field getEnddate() { - return enddate; - } - - public void setEnddate(Field enddate) { - this.enddate = enddate; - } - - public Field getCallidentifier() { - return callidentifier; - } - - public void setCallidentifier(Field callidentifier) { - this.callidentifier = callidentifier; - } - - public Field getKeywords() { - return keywords; - } - - public void setKeywords(Field keywords) { - this.keywords = keywords; - } - - public Field getDuration() { - return duration; - } - - public void setDuration(Field duration) { - this.duration = duration; - } - - public Field getEcsc39() { - return ecsc39; - } - - public void setEcsc39(Field ecsc39) { - this.ecsc39 = ecsc39; - } - - public Field getOamandatepublications() { - return oamandatepublications; - } - - public void setOamandatepublications(Field oamandatepublications) { - this.oamandatepublications = oamandatepublications; - } - - public Field getEcarticle29_3() { - return ecarticle29_3; - } - - public void setEcarticle29_3(Field ecarticle29_3) { - this.ecarticle29_3 = ecarticle29_3; - } - - public List getSubjects() { - return subjects; - } - - public void setSubjects(List subjects) { - this.subjects = subjects; - } - - public List> getFundingtree() { - return fundingtree; - } - - public void setFundingtree(List> fundingtree) { - this.fundingtree = fundingtree; - } - - public Qualifier getContracttype() { - return contracttype; - } - - public void setContracttype(Qualifier contracttype) { - this.contracttype = contracttype; - } - - public Field getOptional1() { - return optional1; - } - - public void setOptional1(Field optional1) { - this.optional1 = optional1; - } - - public Field getOptional2() { - return optional2; - } - - public void setOptional2(Field optional2) { - this.optional2 = optional2; - } - - public Field getJsonextrainfo() { - return jsonextrainfo; - } - - public void setJsonextrainfo(Field jsonextrainfo) { - this.jsonextrainfo = jsonextrainfo; - } - - public Field getContactfullname() { - return contactfullname; - } - - public void setContactfullname(Field contactfullname) { - this.contactfullname = contactfullname; - } - - public Field getContactfax() { - return contactfax; - } - - public void setContactfax(Field contactfax) { - this.contactfax = contactfax; - } - - public Field getContactphone() { - return contactphone; - } - - public void setContactphone(Field contactphone) { - this.contactphone = contactphone; - } - - public Field getContactemail() { - return contactemail; - } - - public void setContactemail(Field contactemail) { - this.contactemail = contactemail; - } - - public Field getSummary() { - return summary; - } - - public void setSummary(Field summary) { - this.summary = summary; - } - - public Field getCurrency() { - return currency; - } - - public void setCurrency(Field currency) { - this.currency = currency; - } - - public Float getTotalcost() { - return totalcost; - } - - public void setTotalcost(Float totalcost) { - this.totalcost = totalcost; - } - - public Float getFundedamount() { - return fundedamount; - } - - public void setFundedamount(Float fundedamount) { - this.fundedamount = fundedamount; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - if (!Project.class.isAssignableFrom(e.getClass())) { - return; - } - - Project p = (Project) e; - - websiteurl = p.getWebsiteurl() != null && compareTrust(this, e) < 0 ? p.getWebsiteurl() : websiteurl; - code = p.getCode() != null && compareTrust(this, e) < 0 ? p.getCode() : code; - acronym = p.getAcronym() != null && compareTrust(this, e) < 0 ? p.getAcronym() : acronym; - title = p.getTitle() != null && compareTrust(this, e) < 0 ? p.getTitle() : title; - startdate = p.getStartdate() != null && compareTrust(this, e) < 0 ? p.getStartdate() : startdate; - enddate = p.getEnddate() != null && compareTrust(this, e) < 0 ? p.getEnddate() : enddate; - callidentifier = p.getCallidentifier() != null && compareTrust(this, e) < 0 - ? p.getCallidentifier() - : callidentifier; - keywords = p.getKeywords() != null && compareTrust(this, e) < 0 ? p.getKeywords() : keywords; - duration = p.getDuration() != null && compareTrust(this, e) < 0 ? p.getDuration() : duration; - ecsc39 = p.getEcsc39() != null && compareTrust(this, e) < 0 ? p.getEcsc39() : ecsc39; - oamandatepublications = p.getOamandatepublications() != null && compareTrust(this, e) < 0 - ? p.getOamandatepublications() - : oamandatepublications; - ecarticle29_3 = p.getEcarticle29_3() != null && compareTrust(this, e) < 0 - ? p.getEcarticle29_3() - : ecarticle29_3; - subjects = mergeLists(subjects, p.getSubjects()); - fundingtree = mergeLists(fundingtree, p.getFundingtree()); - contracttype = p.getContracttype() != null && compareTrust(this, e) < 0 - ? p.getContracttype() - : contracttype; - optional1 = p.getOptional1() != null && compareTrust(this, e) < 0 ? p.getOptional1() : optional1; - optional2 = p.getOptional2() != null && compareTrust(this, e) < 0 ? p.getOptional2() : optional2; - jsonextrainfo = p.getJsonextrainfo() != null && compareTrust(this, e) < 0 - ? p.getJsonextrainfo() - : jsonextrainfo; - contactfullname = p.getContactfullname() != null && compareTrust(this, e) < 0 - ? p.getContactfullname() - : contactfullname; - contactfax = p.getContactfax() != null && compareTrust(this, e) < 0 ? p.getContactfax() : contactfax; - contactphone = p.getContactphone() != null && compareTrust(this, e) < 0 - ? p.getContactphone() - : contactphone; - contactemail = p.getContactemail() != null && compareTrust(this, e) < 0 - ? p.getContactemail() - : contactemail; - summary = p.getSummary() != null && compareTrust(this, e) < 0 ? p.getSummary() : summary; - currency = p.getCurrency() != null && compareTrust(this, e) < 0 ? p.getCurrency() : currency; - totalcost = p.getTotalcost() != null && compareTrust(this, e) < 0 ? p.getTotalcost() : totalcost; - fundedamount = p.getFundedamount() != null && compareTrust(this, e) < 0 - ? p.getFundedamount() - : fundedamount; - - h2020classification = mergeLists(h2020classification, p.getH2020classification()); - - mergeOAFDataInfo(e); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java deleted file mode 100644 index 3058c262b..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java +++ /dev/null @@ -1,39 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; - -import eu.dnetlib.dhp.schema.common.ModelConstants; - -public class Publication extends Result implements Serializable { - - // publication specific - private Journal journal; - - public Publication() { - setResulttype(ModelConstants.PUBLICATION_DEFAULT_RESULTTYPE); - } - - public Journal getJournal() { - return journal; - } - - public void setJournal(Journal journal) { - this.journal = journal; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - if (!Publication.class.isAssignableFrom(e.getClass())) { - return; - } - - Publication p = (Publication) e; - - if (p.getJournal() != null && compareTrust(this, e) < 0) - journal = p.getJournal(); - mergeOAFDataInfo(e); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Qualifier.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Qualifier.java deleted file mode 100644 index 87ecb55f1..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Qualifier.java +++ /dev/null @@ -1,87 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; - -import org.apache.commons.lang3.StringUtils; - -import com.fasterxml.jackson.annotation.JsonIgnore; - -public class Qualifier implements Serializable { - - private String classid; - private String classname; - private String schemeid; - private String schemename; - - public String getClassid() { - return classid; - } - - public void setClassid(String classid) { - this.classid = classid; - } - - public String getClassname() { - return classname; - } - - public void setClassname(String classname) { - this.classname = classname; - } - - public String getSchemeid() { - return schemeid; - } - - public void setSchemeid(String schemeid) { - this.schemeid = schemeid; - } - - public String getSchemename() { - return schemename; - } - - public void setSchemename(String schemename) { - this.schemename = schemename; - } - - public String toComparableString() { - return isBlank() - ? "" - : String - .format( - "%s::%s::%s::%s", - classid != null ? classid : "", - classname != null ? classname : "", - schemeid != null ? schemeid : "", - schemename != null ? schemename : ""); - } - - @JsonIgnore - public boolean isBlank() { - return StringUtils.isBlank(classid) - && StringUtils.isBlank(classname) - && StringUtils.isBlank(schemeid) - && StringUtils.isBlank(schemename); - } - - @Override - public int hashCode() { - return toComparableString().hashCode(); - } - - @Override - public boolean equals(Object obj) { - if (this == obj) - return true; - if (obj == null) - return false; - if (getClass() != obj.getClass()) - return false; - - Qualifier other = (Qualifier) obj; - - return toComparableString().equals(other.toComparableString()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Relation.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Relation.java deleted file mode 100644 index adfc6af95..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Relation.java +++ /dev/null @@ -1,168 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import static com.google.common.base.Preconditions.checkArgument; - -import java.text.ParseException; -import java.util.*; -import java.util.stream.Collectors; -import java.util.stream.Stream; - -import eu.dnetlib.dhp.schema.common.ModelSupport; - -/** - * Relation models any edge between two nodes in the OpenAIRE graph. It has a source id and a target id pointing to - * graph node identifiers and it is further characterised by the semantic of the link through the fields relType, - * subRelType and relClass. Provenance information is modeled according to the dataInfo element and collectedFrom, while - * individual relationship types can provide extra information via the properties field. - */ -public class Relation extends Oaf { - - /** - * Main relationship classifier, values include 'resultResult', 'resultProject', 'resultOrganization', etc. - */ - private String relType; - - /** - * Further classifies a relationship, values include 'affiliation', 'similarity', 'supplement', etc. - */ - private String subRelType; - - /** - * Indicates the direction of the relationship, values include 'isSupplementTo', 'isSupplementedBy', 'merges, - * 'isMergedIn'. - */ - private String relClass; - - /** - * The source entity id. - */ - private String source; - - /** - * The target entity id. - */ - private String target; - - /** - * Was this relationship authoritatively validated? - */ - private Boolean validated; - - /** - * When was this relationship authoritatively validated. - */ - private String validationDate; - - /** - * List of relation specific properties. Values include 'similarityLevel', indicating the similarity score between a - * pair of publications. - */ - private List properties = new ArrayList<>(); - - public String getRelType() { - return relType; - } - - public void setRelType(final String relType) { - this.relType = relType; - } - - public String getSubRelType() { - return subRelType; - } - - public void setSubRelType(final String subRelType) { - this.subRelType = subRelType; - } - - public String getRelClass() { - return relClass; - } - - public void setRelClass(final String relClass) { - this.relClass = relClass; - } - - public String getSource() { - return source; - } - - public void setSource(final String source) { - this.source = source; - } - - public String getTarget() { - return target; - } - - public void setTarget(final String target) { - this.target = target; - } - - public List getProperties() { - return properties; - } - - public void setProperties(List properties) { - this.properties = properties; - } - - public Boolean getValidated() { - return Objects.nonNull(validated) && validated; - } - - public void setValidated(Boolean validated) { - this.validated = validated; - } - - public String getValidationDate() { - return validationDate; - } - - public void setValidationDate(String validationDate) { - this.validationDate = validationDate; - } - - public void mergeFrom(final Relation r) { - - checkArgument(Objects.equals(getSource(), r.getSource()), "source ids must be equal"); - checkArgument(Objects.equals(getTarget(), r.getTarget()), "target ids must be equal"); - checkArgument(Objects.equals(getRelType(), r.getRelType()), "relType(s) must be equal"); - checkArgument( - Objects.equals(getSubRelType(), r.getSubRelType()), "subRelType(s) must be equal"); - checkArgument(Objects.equals(getRelClass(), r.getRelClass()), "relClass(es) must be equal"); - - setValidated(getValidated() || r.getValidated()); - try { - setValidationDate(ModelSupport.oldest(getValidationDate(), r.getValidationDate())); - } catch (ParseException e) { - throw new IllegalArgumentException(String - .format( - "invalid validation date format in relation [s:%s, t:%s]: %s", getSource(), getTarget(), - getValidationDate())); - } - - super.mergeFrom(r); - } - - @Override - public boolean equals(Object o) { - if (this == o) - return true; - if (o == null || getClass() != o.getClass()) - return false; - Relation relation = (Relation) o; - return relType.equals(relation.relType) - && subRelType.equals(relation.subRelType) - && relClass.equals(relation.relClass) - && source.equals(relation.source) - && target.equals(relation.target); - } - - @Override - public int hashCode() { - return Objects.hash(relType, subRelType, relClass, source, target, collectedfrom); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java deleted file mode 100644 index 945ebad50..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java +++ /dev/null @@ -1,350 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Comparator; -import java.util.List; -import java.util.stream.Collectors; - -import eu.dnetlib.dhp.schema.common.AccessRightComparator; - -public class Result extends OafEntity implements Serializable { - - private List measures; - - private List author; - - // resulttype allows subclassing results into publications | datasets | software - private Qualifier resulttype; - - // common fields - private Qualifier language; - - private List country; - - private List subject; - - private List title; - - private List relevantdate; - - private List> description; - - private Field dateofacceptance; - - private Field publisher; - - private Field embargoenddate; - - private List> source; - - private List> fulltext; // remove candidate - - private List> format; - - private List> contributor; - - private Qualifier resourcetype; - - private List> coverage; - - private Qualifier bestaccessright; - - private List context; - - private List externalReference; - - private List instance; - - public List getMeasures() { - return measures; - } - - public void setMeasures(List measures) { - this.measures = measures; - } - - public List getAuthor() { - return author; - } - - public void setAuthor(List author) { - this.author = author; - } - - public Qualifier getResulttype() { - return resulttype; - } - - public void setResulttype(Qualifier resulttype) { - this.resulttype = resulttype; - } - - public Qualifier getLanguage() { - return language; - } - - public void setLanguage(Qualifier language) { - this.language = language; - } - - public List getCountry() { - return country; - } - - public void setCountry(List country) { - this.country = country; - } - - public List getSubject() { - return subject; - } - - public void setSubject(List subject) { - this.subject = subject; - } - - public List getTitle() { - return title; - } - - public void setTitle(List title) { - this.title = title; - } - - public List getRelevantdate() { - return relevantdate; - } - - public void setRelevantdate(List relevantdate) { - this.relevantdate = relevantdate; - } - - public List> getDescription() { - return description; - } - - public void setDescription(List> description) { - this.description = description; - } - - public Field getDateofacceptance() { - return dateofacceptance; - } - - public void setDateofacceptance(Field dateofacceptance) { - this.dateofacceptance = dateofacceptance; - } - - public Field getPublisher() { - return publisher; - } - - public void setPublisher(Field publisher) { - this.publisher = publisher; - } - - public Field getEmbargoenddate() { - return embargoenddate; - } - - public void setEmbargoenddate(Field embargoenddate) { - this.embargoenddate = embargoenddate; - } - - public List> getSource() { - return source; - } - - public void setSource(List> source) { - this.source = source; - } - - public List> getFulltext() { - return fulltext; - } - - public void setFulltext(List> fulltext) { - this.fulltext = fulltext; - } - - public List> getFormat() { - return format; - } - - public void setFormat(List> format) { - this.format = format; - } - - public List> getContributor() { - return contributor; - } - - public void setContributor(List> contributor) { - this.contributor = contributor; - } - - public Qualifier getResourcetype() { - return resourcetype; - } - - public void setResourcetype(Qualifier resourcetype) { - this.resourcetype = resourcetype; - } - - public List> getCoverage() { - return coverage; - } - - public void setCoverage(List> coverage) { - this.coverage = coverage; - } - - public Qualifier getBestaccessright() { - return bestaccessright; - } - - public void setBestaccessright(Qualifier bestaccessright) { - this.bestaccessright = bestaccessright; - } - - public List getContext() { - return context; - } - - public void setContext(List context) { - this.context = context; - } - - public List getExternalReference() { - return externalReference; - } - - public void setExternalReference(List externalReference) { - this.externalReference = externalReference; - } - - public List getInstance() { - return instance; - } - - public void setInstance(List instance) { - this.instance = instance; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - if (!Result.class.isAssignableFrom(e.getClass())) { - return; - } - - Result r = (Result) e; - - measures = mergeLists(measures, r.getMeasures()); - - instance = mergeLists(instance, r.getInstance()); - - if (r.getBestaccessright() != null - && new AccessRightComparator().compare(r.getBestaccessright(), bestaccessright) < 0) - bestaccessright = r.getBestaccessright(); - - if (r.getResulttype() != null && compareTrust(this, r) < 0) - resulttype = r.getResulttype(); - - if (r.getLanguage() != null && compareTrust(this, r) < 0) - language = r.getLanguage(); - - country = mergeLists(country, r.getCountry()); - - subject = mergeLists(subject, r.getSubject()); - - // merge title lists: main title with higher trust and distinct between the others - StructuredProperty baseMainTitle = null; - if (title != null) { - baseMainTitle = getMainTitle(title); - if (baseMainTitle != null) { - final StructuredProperty p = baseMainTitle; - title = title.stream().filter(t -> t != p).collect(Collectors.toList()); - } - } - - StructuredProperty newMainTitle = null; - if (r.getTitle() != null) { - newMainTitle = getMainTitle(r.getTitle()); - if (newMainTitle != null) { - final StructuredProperty p = newMainTitle; - r.setTitle(r.getTitle().stream().filter(t -> t != p).collect(Collectors.toList())); - } - } - - if (newMainTitle != null && compareTrust(this, r) < 0) { - baseMainTitle = newMainTitle; - } - - title = mergeLists(title, r.getTitle()); - if (title != null && baseMainTitle != null) { - title.add(baseMainTitle); - } - - relevantdate = mergeLists(relevantdate, r.getRelevantdate()); - - description = longestLists(description, r.getDescription()); - - if (r.getPublisher() != null && compareTrust(this, r) < 0) - publisher = r.getPublisher(); - - if (r.getEmbargoenddate() != null && compareTrust(this, r) < 0) - embargoenddate = r.getEmbargoenddate(); - - source = mergeLists(source, r.getSource()); - - fulltext = mergeLists(fulltext, r.getFulltext()); - - format = mergeLists(format, r.getFormat()); - - contributor = mergeLists(contributor, r.getContributor()); - - if (r.getResourcetype() != null) - resourcetype = r.getResourcetype(); - - coverage = mergeLists(coverage, r.getCoverage()); - - context = mergeLists(context, r.getContext()); - - externalReference = mergeLists(externalReference, r.getExternalReference()); - } - - private List> longestLists(List> a, List> b) { - if (a == null || b == null) - return a == null ? b : a; - if (a.size() == b.size()) { - int msa = a - .stream() - .filter(i -> i != null && i.getValue() != null) - .map(i -> i.getValue().length()) - .max(Comparator.naturalOrder()) - .orElse(0); - int msb = b - .stream() - .filter(i -> i != null && i.getValue() != null) - .map(i -> i.getValue().length()) - .max(Comparator.naturalOrder()) - .orElse(0); - return msa > msb ? a : b; - } - return a.size() > b.size() ? a : b; - } - - private StructuredProperty getMainTitle(List titles) { - // need to check if the list of titles contains more than 1 main title? (in that case, we should chose which - // main title select in the list) - for (StructuredProperty title : titles) { - if (title.getQualifier() != null && title.getQualifier().getClassid() != null) - if (title.getQualifier().getClassid().equals("main title")) - return title; - } - return null; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java deleted file mode 100644 index d25b5c9ce..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java +++ /dev/null @@ -1,80 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.List; - -import eu.dnetlib.dhp.schema.common.ModelConstants; - -public class Software extends Result implements Serializable { - - private List> documentationUrl; - - // candidate for removal - private List license; - - // candidate for removal - private Field codeRepositoryUrl; - - private Qualifier programmingLanguage; - - public Software() { - setResulttype(ModelConstants.SOFTWARE_DEFAULT_RESULTTYPE); - } - - public List> getDocumentationUrl() { - return documentationUrl; - } - - public void setDocumentationUrl(List> documentationUrl) { - this.documentationUrl = documentationUrl; - } - - public List getLicense() { - return license; - } - - public void setLicense(List license) { - this.license = license; - } - - public Field getCodeRepositoryUrl() { - return codeRepositoryUrl; - } - - public void setCodeRepositoryUrl(Field codeRepositoryUrl) { - this.codeRepositoryUrl = codeRepositoryUrl; - } - - public Qualifier getProgrammingLanguage() { - return programmingLanguage; - } - - public void setProgrammingLanguage(Qualifier programmingLanguage) { - this.programmingLanguage = programmingLanguage; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - - if (!Software.class.isAssignableFrom(e.getClass())) { - return; - } - - final Software s = (Software) e; - documentationUrl = mergeLists(documentationUrl, s.getDocumentationUrl()); - - license = mergeLists(license, s.getLicense()); - - codeRepositoryUrl = s.getCodeRepositoryUrl() != null && compareTrust(this, s) < 0 - ? s.getCodeRepositoryUrl() - : codeRepositoryUrl; - - programmingLanguage = s.getProgrammingLanguage() != null && compareTrust(this, s) < 0 - ? s.getProgrammingLanguage() - : programmingLanguage; - - mergeOAFDataInfo(e); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/StructuredProperty.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/StructuredProperty.java deleted file mode 100644 index 024b915e4..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/StructuredProperty.java +++ /dev/null @@ -1,72 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.Serializable; -import java.util.Optional; -import java.util.stream.Collectors; -import java.util.stream.Stream; - -import org.apache.commons.lang3.StringUtils; - -import com.google.common.base.Joiner; - -public class StructuredProperty implements Serializable { - - private String value; - - private Qualifier qualifier; - - private DataInfo dataInfo; - - public String getValue() { - return value; - } - - public void setValue(String value) { - this.value = value; - } - - public Qualifier getQualifier() { - return qualifier; - } - - public void setQualifier(Qualifier qualifier) { - this.qualifier = qualifier; - } - - public DataInfo getDataInfo() { - return dataInfo; - } - - public void setDataInfo(DataInfo dataInfo) { - this.dataInfo = dataInfo; - } - - public String toComparableString() { - return Stream - .of( - getQualifier().toComparableString(), - Optional.ofNullable(getValue()).map(String::toLowerCase).orElse("")) - .filter(StringUtils::isNotBlank) - .collect(Collectors.joining("||")); - } - - @Override - public int hashCode() { - return toComparableString().hashCode(); - } - - @Override - public boolean equals(Object obj) { - if (this == obj) - return true; - if (obj == null) - return false; - if (getClass() != obj.getClass()) - return false; - - StructuredProperty other = (StructuredProperty) obj; - - return toComparableString().equals(other.toComparableString()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorData.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorData.java deleted file mode 100644 index 6c94cdb13..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorData.java +++ /dev/null @@ -1,72 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; -import java.util.List; - -import com.google.common.collect.Lists; - -/** - * This class models the data that are retrieved from orcid publication - */ - -public class AuthorData implements Serializable { - - private String oid; - private String name; - private String surname; - private String creditName; - private String errorCode; - private List otherNames; - - public String getErrorCode() { - return errorCode; - } - - public void setErrorCode(String errorCode) { - this.errorCode = errorCode; - } - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public String getSurname() { - return surname; - } - - public void setSurname(String surname) { - this.surname = surname; - } - - public String getCreditName() { - return creditName; - } - - public void setCreditName(String creditName) { - this.creditName = creditName; - } - - public String getOid() { - return oid; - } - - public void setOid(String oid) { - this.oid = oid; - } - - public List getOtherNames() { - return otherNames; - } - - public void setOtherNames(List otherNames) { - if (this.otherNames == null) { - this.otherNames = Lists.newArrayList(); - } - this.otherNames = otherNames; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/OrcidDOI.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/OrcidDOI.java deleted file mode 100644 index cf372c12a..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/OrcidDOI.java +++ /dev/null @@ -1,25 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.util.List; - -public class OrcidDOI { - private String doi; - private List authors; - - public String getDoi() { - return doi; - } - - public void setDoi(String doi) { - this.doi = doi; - } - - public List getAuthors() { - return authors; - } - - public void setAuthors(List authors) { - this.authors = authors; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIDataset.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIDataset.java deleted file mode 100644 index 421b4ecaa..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIDataset.java +++ /dev/null @@ -1,89 +0,0 @@ - -package eu.dnetlib.dhp.schema.scholexplorer; - -import java.util.ArrayList; -import java.util.HashMap; -import java.util.List; -import java.util.Map; - -import org.apache.commons.lang3.StringUtils; - -import eu.dnetlib.dhp.schema.oaf.Dataset; -import eu.dnetlib.dhp.schema.oaf.OafEntity; - -public class DLIDataset extends Dataset { - - private String originalObjIdentifier; - - private List dlicollectedfrom; - - private String completionStatus; - - public String getCompletionStatus() { - return completionStatus; - } - - public void setCompletionStatus(String completionStatus) { - this.completionStatus = completionStatus; - } - - public List getDlicollectedfrom() { - return dlicollectedfrom; - } - - public void setDlicollectedfrom(List dlicollectedfrom) { - this.dlicollectedfrom = dlicollectedfrom; - } - - public String getOriginalObjIdentifier() { - return originalObjIdentifier; - } - - public void setOriginalObjIdentifier(String originalObjIdentifier) { - this.originalObjIdentifier = originalObjIdentifier; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - DLIDataset p = (DLIDataset) e; - if (StringUtils.isBlank(completionStatus) && StringUtils.isNotBlank(p.completionStatus)) - completionStatus = p.completionStatus; - if ("complete".equalsIgnoreCase(p.completionStatus)) - completionStatus = "complete"; - dlicollectedfrom = mergeProvenance(dlicollectedfrom, p.getDlicollectedfrom()); - } - - private List mergeProvenance( - final List a, final List b) { - Map result = new HashMap<>(); - if (a != null) - a - .forEach( - p -> { - if (p != null && StringUtils.isNotBlank(p.getId()) && result.containsKey(p.getId())) { - if ("incomplete".equalsIgnoreCase(result.get(p.getId()).getCompletionStatus()) - && StringUtils.isNotBlank(p.getCompletionStatus())) { - result.put(p.getId(), p); - } - - } else if (p != null && p.getId() != null && !result.containsKey(p.getId())) - result.put(p.getId(), p); - }); - if (b != null) - b - .forEach( - p -> { - if (p != null && StringUtils.isNotBlank(p.getId()) && result.containsKey(p.getId())) { - if ("incomplete".equalsIgnoreCase(result.get(p.getId()).getCompletionStatus()) - && StringUtils.isNotBlank(p.getCompletionStatus())) { - result.put(p.getId(), p); - } - - } else if (p != null && p.getId() != null && !result.containsKey(p.getId())) - result.put(p.getId(), p); - }); - - return new ArrayList<>(result.values()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIPublication.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIPublication.java deleted file mode 100644 index c899a899c..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIPublication.java +++ /dev/null @@ -1,87 +0,0 @@ - -package eu.dnetlib.dhp.schema.scholexplorer; - -import java.io.Serializable; -import java.util.*; - -import org.apache.commons.lang3.StringUtils; - -import eu.dnetlib.dhp.schema.oaf.OafEntity; -import eu.dnetlib.dhp.schema.oaf.Publication; - -public class DLIPublication extends Publication implements Serializable { - - private String originalObjIdentifier; - - private List dlicollectedfrom; - - private String completionStatus; - - public String getCompletionStatus() { - return completionStatus; - } - - public void setCompletionStatus(String completionStatus) { - this.completionStatus = completionStatus; - } - - public List getDlicollectedfrom() { - return dlicollectedfrom; - } - - public void setDlicollectedfrom(List dlicollectedfrom) { - this.dlicollectedfrom = dlicollectedfrom; - } - - public String getOriginalObjIdentifier() { - return originalObjIdentifier; - } - - public void setOriginalObjIdentifier(String originalObjIdentifier) { - this.originalObjIdentifier = originalObjIdentifier; - } - - @Override - public void mergeFrom(OafEntity e) { - super.mergeFrom(e); - DLIPublication p = (DLIPublication) e; - if (StringUtils.isBlank(completionStatus) && StringUtils.isNotBlank(p.completionStatus)) - completionStatus = p.completionStatus; - if ("complete".equalsIgnoreCase(p.completionStatus)) - completionStatus = "complete"; - dlicollectedfrom = mergeProvenance(dlicollectedfrom, p.getDlicollectedfrom()); - } - - private List mergeProvenance( - final List a, final List b) { - Map result = new HashMap<>(); - if (a != null) - a - .forEach( - p -> { - if (p != null && StringUtils.isNotBlank(p.getId()) && result.containsKey(p.getId())) { - if ("incomplete".equalsIgnoreCase(result.get(p.getId()).getCompletionStatus()) - && StringUtils.isNotBlank(p.getCompletionStatus())) { - result.put(p.getId(), p); - } - - } else if (p != null && p.getId() != null && !result.containsKey(p.getId())) - result.put(p.getId(), p); - }); - if (b != null) - b - .forEach( - p -> { - if (p != null && StringUtils.isNotBlank(p.getId()) && result.containsKey(p.getId())) { - if ("incomplete".equalsIgnoreCase(result.get(p.getId()).getCompletionStatus()) - && StringUtils.isNotBlank(p.getCompletionStatus())) { - result.put(p.getId(), p); - } - - } else if (p != null && p.getId() != null && !result.containsKey(p.getId())) - result.put(p.getId(), p); - }); - - return new ArrayList<>(result.values()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIUnknown.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIUnknown.java deleted file mode 100644 index 5da599427..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/DLIUnknown.java +++ /dev/null @@ -1,132 +0,0 @@ - -package eu.dnetlib.dhp.schema.scholexplorer; - -import java.io.Serializable; -import java.util.*; -import java.util.stream.Collectors; - -import org.apache.commons.lang3.StringUtils; - -import eu.dnetlib.dhp.schema.oaf.Oaf; -import eu.dnetlib.dhp.schema.oaf.StructuredProperty; - -public class DLIUnknown extends Oaf implements Serializable { - - private String id; - - private List pid; - - private String dateofcollection; - - private String dateoftransformation; - - private List dlicollectedfrom; - - private String completionStatus = "incomplete"; - - public String getCompletionStatus() { - return completionStatus; - } - - public void setCompletionStatus(String completionStatus) { - this.completionStatus = completionStatus; - } - - public List getDlicollectedfrom() { - return dlicollectedfrom; - } - - public void setDlicollectedfrom(List dlicollectedfrom) { - this.dlicollectedfrom = dlicollectedfrom; - } - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public List getPid() { - return pid; - } - - public void setPid(List pid) { - this.pid = pid; - } - - public String getDateofcollection() { - return dateofcollection; - } - - public void setDateofcollection(String dateofcollection) { - this.dateofcollection = dateofcollection; - } - - public String getDateoftransformation() { - return dateoftransformation; - } - - public void setDateoftransformation(String dateoftransformation) { - this.dateoftransformation = dateoftransformation; - } - - public void mergeFrom(DLIUnknown p) { - if ("complete".equalsIgnoreCase(p.completionStatus)) - completionStatus = "complete"; - dlicollectedfrom = mergeProvenance(dlicollectedfrom, p.getDlicollectedfrom()); - if (StringUtils.isEmpty(id) && StringUtils.isNoneEmpty(p.getId())) - id = p.getId(); - if (StringUtils.isEmpty(dateofcollection) && StringUtils.isNoneEmpty(p.getDateofcollection())) - dateofcollection = p.getDateofcollection(); - - if (StringUtils.isEmpty(dateoftransformation) && StringUtils.isNoneEmpty(p.getDateoftransformation())) - dateofcollection = p.getDateoftransformation(); - pid = mergeLists(pid, p.getPid()); - } - - protected List mergeLists(final List... lists) { - - return Arrays - .stream(lists) - .filter(Objects::nonNull) - .flatMap(List::stream) - .filter(Objects::nonNull) - .distinct() - .collect(Collectors.toList()); - } - - private List mergeProvenance( - final List a, final List b) { - Map result = new HashMap<>(); - if (a != null) - a - .forEach( - p -> { - if (p != null && StringUtils.isNotBlank(p.getId()) && result.containsKey(p.getId())) { - if ("incomplete".equalsIgnoreCase(result.get(p.getId()).getCompletionStatus()) - && StringUtils.isNotBlank(p.getCompletionStatus())) { - result.put(p.getId(), p); - } - - } else if (p != null && p.getId() != null && !result.containsKey(p.getId())) - result.put(p.getId(), p); - }); - if (b != null) - b - .forEach( - p -> { - if (p != null && StringUtils.isNotBlank(p.getId()) && result.containsKey(p.getId())) { - if ("incomplete".equalsIgnoreCase(result.get(p.getId()).getCompletionStatus()) - && StringUtils.isNotBlank(p.getCompletionStatus())) { - result.put(p.getId(), p); - } - - } else if (p != null && p.getId() != null && !result.containsKey(p.getId())) - result.put(p.getId(), p); - }); - - return new ArrayList<>(result.values()); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/OafUtils.scala b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/OafUtils.scala deleted file mode 100644 index b0cd344be..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/OafUtils.scala +++ /dev/null @@ -1,100 +0,0 @@ -package eu.dnetlib.dhp.schema.scholexplorer - -import eu.dnetlib.dhp.schema.common.ModelConstants -import eu.dnetlib.dhp.schema.oaf.{AccessRight, DataInfo, Field, KeyValue, Qualifier, StructuredProperty} - -object OafUtils { - - - - def generateKeyValue(key: String, value: String): KeyValue = { - val kv: KeyValue = new KeyValue() - kv.setKey(key) - kv.setValue(value) - kv.setDataInfo(generateDataInfo("0.9")) - kv - } - - - def generateDataInfo(trust: String = "0.9", invisible: Boolean = false): DataInfo = { - val di = new DataInfo - di.setDeletedbyinference(false) - di.setInferred(false) - di.setInvisible(invisible) - di.setTrust(trust) - di.setProvenanceaction(createQualifier(ModelConstants.SYSIMPORT_ACTIONSET, ModelConstants.DNET_PROVENANCE_ACTIONS)) - di - } - - def createQualifier(cls: String, sch: String): Qualifier = { - createQualifier(cls, cls, sch, sch) - } - - - def createQualifier(classId: String, className: String, schemeId: String, schemeName: String): Qualifier = { - val q: Qualifier = new Qualifier - q.setClassid(classId) - q.setClassname(className) - q.setSchemeid(schemeId) - q.setSchemename(schemeName) - q - } - - def createAccessRight(classId: String, className: String, schemeId: String, schemeName: String): AccessRight = { - val accessRight: AccessRight = new AccessRight - accessRight.setClassid(classId) - accessRight.setClassname(className) - accessRight.setSchemeid(schemeId) - accessRight.setSchemename(schemeName) - accessRight - } - - - def asField[T](value: T): Field[T] = { - val tmp = new Field[T] - tmp.setValue(value) - tmp - - - } - - def createSP(value: String, classId: String,className:String, schemeId: String, schemeName:String): StructuredProperty = { - val sp = new StructuredProperty - sp.setQualifier(createQualifier(classId,className, schemeId, schemeName)) - sp.setValue(value) - sp - - } - - - - def createSP(value: String, classId: String,className:String, schemeId: String, schemeName:String, dataInfo: DataInfo): StructuredProperty = { - val sp = new StructuredProperty - sp.setQualifier(createQualifier(classId,className, schemeId, schemeName)) - sp.setValue(value) - sp.setDataInfo(dataInfo) - sp - - } - - def createSP(value: String, classId: String, schemeId: String): StructuredProperty = { - val sp = new StructuredProperty - sp.setQualifier(createQualifier(classId, schemeId)) - sp.setValue(value) - sp - - } - - - - def createSP(value: String, classId: String, schemeId: String, dataInfo: DataInfo): StructuredProperty = { - val sp = new StructuredProperty - sp.setQualifier(createQualifier(classId, schemeId)) - sp.setValue(value) - sp.setDataInfo(dataInfo) - sp - - } - - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/ProvenaceInfo.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/ProvenaceInfo.java deleted file mode 100644 index b1188f064..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/scholexplorer/ProvenaceInfo.java +++ /dev/null @@ -1,47 +0,0 @@ - -package eu.dnetlib.dhp.schema.scholexplorer; - -import java.io.Serializable; - -public class ProvenaceInfo implements Serializable { - - private String id; - - private String name; - - private String completionStatus; - - private String collectionMode = "collected"; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public String getCompletionStatus() { - return completionStatus; - } - - public void setCompletionStatus(String completionStatus) { - this.completionStatus = completionStatus; - } - - public String getCollectionMode() { - return collectionMode; - } - - public void setCollectionMode(String collectionMode) { - this.collectionMode = collectionMode; - } -} diff --git a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/action/AtomicActionTest.java b/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/action/AtomicActionTest.java deleted file mode 100644 index 9818d03e7..000000000 --- a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/action/AtomicActionTest.java +++ /dev/null @@ -1,41 +0,0 @@ - -package eu.dnetlib.dhp.schema.action; - -import static org.junit.jupiter.api.Assertions.*; - -import java.io.IOException; - -import org.apache.commons.lang3.StringUtils; -import org.junit.jupiter.api.Test; - -import com.fasterxml.jackson.databind.ObjectMapper; - -import eu.dnetlib.dhp.schema.common.ModelConstants; -import eu.dnetlib.dhp.schema.oaf.Relation; - -/** @author claudio.atzori */ -public class AtomicActionTest { - - @Test - public void serializationTest() throws IOException { - - Relation rel = new Relation(); - rel.setSource("1"); - rel.setTarget("2"); - rel.setRelType(ModelConstants.RESULT_RESULT); - rel.setSubRelType(ModelConstants.DEDUP); - rel.setRelClass(ModelConstants.MERGES); - - AtomicAction aa1 = new AtomicAction(Relation.class, rel); - - final ObjectMapper mapper = new ObjectMapper(); - String json = mapper.writeValueAsString(aa1); - - assertTrue(StringUtils.isNotBlank(json)); - - AtomicAction aa2 = mapper.readValue(json, AtomicAction.class); - - assertEquals(aa1.getClazz(), aa2.getClazz()); - assertEquals(aa1.getPayload(), aa2.getPayload()); - } -} diff --git a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/common/ModelSupportTest.java b/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/common/ModelSupportTest.java deleted file mode 100644 index 73e8c47ff..000000000 --- a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/common/ModelSupportTest.java +++ /dev/null @@ -1,37 +0,0 @@ - -package eu.dnetlib.dhp.schema.common; - -import static org.junit.jupiter.api.Assertions.assertFalse; -import static org.junit.jupiter.api.Assertions.assertTrue; - -import org.junit.jupiter.api.Nested; -import org.junit.jupiter.api.Test; - -import eu.dnetlib.dhp.schema.oaf.OafEntity; -import eu.dnetlib.dhp.schema.oaf.Relation; -import eu.dnetlib.dhp.schema.oaf.Result; - -public class ModelSupportTest { - - @Nested - class IsSubClass { - - @Test - public void shouldReturnFalseWhenSubClassDoesNotExtendSuperClass() { - // when - Boolean result = ModelSupport.isSubClass(Relation.class, OafEntity.class); - - // then - assertFalse(result); - } - - @Test - public void shouldReturnTrueWhenSubClassExtendsSuperClass() { - // when - Boolean result = ModelSupport.isSubClass(Result.class, OafEntity.class); - - // then - assertTrue(result); - } - } -} diff --git a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/oaf/MeasureTest.java b/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/oaf/MeasureTest.java deleted file mode 100644 index 26b4407c9..000000000 --- a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/oaf/MeasureTest.java +++ /dev/null @@ -1,57 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.io.IOException; -import java.util.List; - -import org.junit.jupiter.api.Assertions; -import org.junit.jupiter.api.Test; - -import com.fasterxml.jackson.annotation.JsonInclude; -import com.fasterxml.jackson.core.type.TypeReference; -import com.fasterxml.jackson.databind.ObjectMapper; -import com.google.common.collect.Lists; - -public class MeasureTest { - - public static final ObjectMapper OBJECT_MAPPER = new ObjectMapper() - .setSerializationInclusion(JsonInclude.Include.NON_NULL); - - @Test - public void testMeasureSerialization() throws IOException { - - Measure popularity = new Measure(); - popularity.setId("popularity"); - popularity - .setUnit( - Lists - .newArrayList( - unit("score", "0.5"))); - - Measure influence = new Measure(); - influence.setId("influence"); - influence - .setUnit( - Lists - .newArrayList( - unit("score", "0.3"))); - - List m = Lists.newArrayList(popularity, influence); - - String s = OBJECT_MAPPER.writeValueAsString(m); - System.out.println(s); - - List mm = OBJECT_MAPPER.readValue(s, new TypeReference>() { - }); - - Assertions.assertNotNull(mm); - } - - private KeyValue unit(String key, String value) { - KeyValue unit = new KeyValue(); - unit.setKey(key); - unit.setValue(value); - return unit; - } - -} diff --git a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/oaf/MergeTest.java b/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/oaf/MergeTest.java deleted file mode 100644 index 98baa1efc..000000000 --- a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/oaf/MergeTest.java +++ /dev/null @@ -1,139 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import static org.junit.jupiter.api.Assertions.*; - -import java.time.format.DateTimeParseException; -import java.util.Arrays; -import java.util.List; - -import org.junit.jupiter.api.BeforeEach; -import org.junit.jupiter.api.Test; - -public class MergeTest { - - OafEntity oaf; - - @BeforeEach - public void setUp() { - oaf = new Publication(); - } - - @Test - public void mergeListsTest() { - - // string list merge test - List a = Arrays.asList("a", "b", "c", "e"); - List b = Arrays.asList("a", "b", "c", "d"); - List c = null; - - System.out.println("merge result 1 = " + oaf.mergeLists(a, b)); - - System.out.println("merge result 2 = " + oaf.mergeLists(a, c)); - - System.out.println("merge result 3 = " + oaf.mergeLists(c, c)); - } - - @Test - public void mergePublicationCollectedFromTest() { - - Publication a = new Publication(); - Publication b = new Publication(); - - a.setCollectedfrom(Arrays.asList(setKV("a", "open"), setKV("b", "closed"))); - b.setCollectedfrom(Arrays.asList(setKV("A", "open"), setKV("b", "Open"))); - - a.mergeFrom(b); - - assertNotNull(a.getCollectedfrom()); - assertEquals(3, a.getCollectedfrom().size()); - } - - @Test - public void mergePublicationSubjectTest() { - - Publication a = new Publication(); - Publication b = new Publication(); - - a.setSubject(Arrays.asList(setSP("a", "open", "classe"), setSP("b", "open", "classe"))); - b.setSubject(Arrays.asList(setSP("A", "open", "classe"), setSP("c", "open", "classe"))); - - a.mergeFrom(b); - - assertNotNull(a.getSubject()); - assertEquals(3, a.getSubject().size()); - } - - @Test - public void mergeRelationTest() { - - Relation a = createRel(null, null); - Relation b = createRel(null, null); - a.mergeFrom(b); - assertEquals(a, b); - - a = createRel(true, null); - b = createRel(null, null); - a.mergeFrom(b); - assertEquals(true, a.getValidated()); - - a = createRel(true, null); - b = createRel(false, null); - a.mergeFrom(b); - assertEquals(true, a.getValidated()); - - a = createRel(true, null); - b = createRel(true, "2016-04-05T12:41:19.202Z"); - a.mergeFrom(b); - assertEquals("2016-04-05T12:41:19.202Z", a.getValidationDate()); - - a = createRel(true, "2016-05-07T12:41:19.202Z"); - b = createRel(true, "2016-04-05T12:41:19.202Z"); - a.mergeFrom(b); - assertEquals("2016-04-05T12:41:19.202Z", a.getValidationDate()); - } - - @Test - public void mergeRelationTestParseException() { - assertThrows(DateTimeParseException.class, () -> { - Relation a = createRel(true, "2016-04-05"); - Relation b = createRel(true, "2016-04-05"); - a.mergeFrom(b); - }); - } - - private Relation createRel(Boolean validated, String validationDate) { - Relation rel = new Relation(); - rel.setSource("1"); - rel.setTarget("2"); - rel.setRelType("reltype"); - rel.setSubRelType("subreltype"); - rel.setRelClass("relclass"); - rel.setValidated(validated); - rel.setValidationDate(validationDate); - return rel; - } - - private KeyValue setKV(final String key, final String value) { - - KeyValue k = new KeyValue(); - - k.setKey(key); - k.setValue(value); - - return k; - } - - private StructuredProperty setSP( - final String value, final String schema, final String classname) { - StructuredProperty s = new StructuredProperty(); - s.setValue(value); - Qualifier q = new Qualifier(); - q.setClassname(classname); - q.setClassid(classname); - q.setSchemename(schema); - q.setSchemeid(schema); - s.setQualifier(q); - return s; - } -} diff --git a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/scholexplorer/DLItest.java b/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/scholexplorer/DLItest.java deleted file mode 100644 index 16ce1523d..000000000 --- a/dhp-schemas/src/test/java/eu/dnetlib/dhp/schema/scholexplorer/DLItest.java +++ /dev/null @@ -1,84 +0,0 @@ - -package eu.dnetlib.dhp.schema.scholexplorer; - -import java.io.IOException; -import java.util.Arrays; -import java.util.Collections; - -import org.junit.jupiter.api.Test; - -import com.fasterxml.jackson.core.JsonProcessingException; -import com.fasterxml.jackson.databind.DeserializationFeature; -import com.fasterxml.jackson.databind.ObjectMapper; -import com.fasterxml.jackson.databind.SerializationFeature; - -import eu.dnetlib.dhp.schema.common.ModelConstants; -import eu.dnetlib.dhp.schema.oaf.Qualifier; -import eu.dnetlib.dhp.schema.oaf.StructuredProperty; - -public class DLItest { - - @Test - public void testMergePublication() throws JsonProcessingException { - DLIPublication a1 = new DLIPublication(); - a1.setPid(Arrays.asList(createSP("123456", "pdb", ModelConstants.DNET_PID_TYPES))); - a1.setTitle(Collections.singletonList(createSP("Un Titolo", "title", "dnetTitle"))); - a1.setDlicollectedfrom(Arrays.asList(createCollectedFrom("znd", "Zenodo", "complete"))); - a1.setCompletionStatus("complete"); - - DLIPublication a = new DLIPublication(); - a - .setPid( - Arrays - .asList( - createSP("10.11", "doi", ModelConstants.DNET_PID_TYPES), - createSP("123456", "pdb", ModelConstants.DNET_PID_TYPES))); - a.setTitle(Collections.singletonList(createSP("A Title", "title", "dnetTitle"))); - a - .setDlicollectedfrom( - Arrays - .asList( - createCollectedFrom("dct", "datacite", "complete"), - createCollectedFrom("dct", "datacite", "incomplete"))); - a.setCompletionStatus("incomplete"); - - a.mergeFrom(a1); - - ObjectMapper mapper = new ObjectMapper(); - System.out.println(mapper.writeValueAsString(a)); - } - - @Test - public void testDeserialization() throws IOException { - - final String json = "{\"dataInfo\":{\"invisible\":false,\"inferred\":null,\"deletedbyinference\":false,\"trust\":\"0.9\",\"inferenceprovenance\":null,\"provenanceaction\":null},\"lastupdatetimestamp\":null,\"id\":\"60|bd9352547098929a394655ad1a44a479\",\"originalId\":[\"bd9352547098929a394655ad1a44a479\"],\"collectedfrom\":[{\"key\":\"dli_________::datacite\",\"value\":\"Datasets in Datacite\",\"dataInfo\":null,\"blank\":false}],\"pid\":[{\"value\":\"10.7925/DRS1.DUCHAS_5078760\",\"qualifier\":{\"classid\":\"doi\",\"classname\":\"doi\",\"schemeid\":\"dnet:pid_types\",\"schemename\":\"dnet:pid_types\",\"blank\":false},\"dataInfo\":null}],\"dateofcollection\":\"2020-01-09T08:29:31.885Z\",\"dateoftransformation\":null,\"extraInfo\":null,\"oaiprovenance\":null,\"author\":[{\"fullname\":\"Cathail, S. Ó\",\"name\":null,\"surname\":null,\"rank\":null,\"pid\":null,\"affiliation\":null},{\"fullname\":\"Donnell, Breda Mc\",\"name\":null,\"surname\":null,\"rank\":null,\"pid\":null,\"affiliation\":null},{\"fullname\":\"Ireland. Department of Arts, Culture, and the Gaeltacht\",\"name\":null,\"surname\":null,\"rank\":null,\"pid\":null,\"affiliation\":null},{\"fullname\":\"University College Dublin\",\"name\":null,\"surname\":null,\"rank\":null,\"pid\":null,\"affiliation\":null},{\"fullname\":\"National Folklore Foundation\",\"name\":null,\"surname\":null,\"rank\":null,\"pid\":null,\"affiliation\":null},{\"fullname\":\"Cathail, S. Ó\",\"name\":null,\"surname\":null,\"rank\":null,\"pid\":null,\"affiliation\":null},{\"fullname\":\"Donnell, Breda Mc\",\"name\":null,\"surname\":null,\"rank\":null,\"pid\":null,\"affiliation\":null}],\"resulttype\":null,\"language\":null,\"country\":null,\"subject\":[{\"value\":\"Recreation\",\"qualifier\":{\"classid\":\"dnet:subject\",\"classname\":\"dnet:subject\",\"schemeid\":\"unknown\",\"schemename\":\"unknown\",\"blank\":false},\"dataInfo\":null},{\"value\":\"Entertainments and recreational activities\",\"qualifier\":{\"classid\":\"dnet:subject\",\"classname\":\"dnet:subject\",\"schemeid\":\"unknown\",\"schemename\":\"unknown\",\"blank\":false},\"dataInfo\":null},{\"value\":\"Siamsaíocht agus caitheamh aimsire\",\"qualifier\":{\"classid\":\"dnet:subject\",\"classname\":\"dnet:subject\",\"schemeid\":\"unknown\",\"schemename\":\"unknown\",\"blank\":false},\"dataInfo\":null}],\"title\":[{\"value\":\"Games We Play\",\"qualifier\":null,\"dataInfo\":null}],\"relevantdate\":[{\"value\":\"1938-09-28\",\"qualifier\":{\"classid\":\"date\",\"classname\":\"date\",\"schemeid\":\"dnet::date\",\"schemename\":\"dnet::date\",\"blank\":false},\"dataInfo\":null}],\"description\":[{\"value\":\"Story collected by Breda Mc Donnell, a student at Tenure school (Tinure, Co. Louth) (no informant identified).\",\"dataInfo\":null}],\"dateofacceptance\":null,\"publisher\":{\"value\":\"University College Dublin\",\"dataInfo\":null},\"embargoenddate\":null,\"source\":null,\"fulltext\":null,\"format\":null,\"contributor\":null,\"resourcetype\":null,\"coverage\":null,\"refereed\":null,\"context\":null,\"processingchargeamount\":null,\"processingchargecurrency\":null,\"externalReference\":null,\"instance\":[],\"storagedate\":null,\"device\":null,\"size\":null,\"version\":null,\"lastmetadataupdate\":null,\"metadataversionnumber\":null,\"geolocation\":null,\"dlicollectedfrom\":[{\"id\":\"dli_________::datacite\",\"name\":\"Datasets in Datacite\",\"completionStatus\":\"complete\",\"collectionMode\":\"resolved\"}],\"completionStatus\":\"complete\"}"; - - ObjectMapper mapper = new ObjectMapper(); - mapper.configure(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES, false); - DLIDataset dliDataset = mapper.readValue(json, DLIDataset.class); - mapper.enable(SerializationFeature.INDENT_OUTPUT); - System.out.println(mapper.writeValueAsString(dliDataset)); - } - - private ProvenaceInfo createCollectedFrom( - final String id, final String name, final String completionStatus) { - ProvenaceInfo p = new ProvenaceInfo(); - p.setId(id); - p.setName(name); - p.setCompletionStatus(completionStatus); - return p; - } - - private StructuredProperty createSP( - final String value, final String className, final String schemeName) { - StructuredProperty p = new StructuredProperty(); - p.setValue(value); - Qualifier schema = new Qualifier(); - schema.setClassname(className); - schema.setClassid(className); - schema.setSchemename(schemeName); - schema.setSchemeid(schemeName); - p.setQualifier(schema); - return p; - } -} diff --git a/dhp-workflows/dhp-actionmanager/pom.xml b/dhp-workflows/dhp-actionmanager/pom.xml index 0b4d25700..6dc33e76b 100644 --- a/dhp-workflows/dhp-actionmanager/pom.xml +++ b/dhp-workflows/dhp-actionmanager/pom.xml @@ -59,7 +59,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} diff --git a/dhp-workflows/dhp-aggregation/pom.xml b/dhp-workflows/dhp-aggregation/pom.xml index 580c1e0f3..fcea2b19e 100644 --- a/dhp-workflows/dhp-aggregation/pom.xml +++ b/dhp-workflows/dhp-aggregation/pom.xml @@ -63,7 +63,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} diff --git a/dhp-workflows/dhp-blacklist/pom.xml b/dhp-workflows/dhp-blacklist/pom.xml index 9c25f7b29..185c53ab7 100644 --- a/dhp-workflows/dhp-blacklist/pom.xml +++ b/dhp-workflows/dhp-blacklist/pom.xml @@ -17,7 +17,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} diff --git a/dhp-workflows/dhp-broker-events/pom.xml b/dhp-workflows/dhp-broker-events/pom.xml index 75cc0ea09..4ae818e3c 100644 --- a/dhp-workflows/dhp-broker-events/pom.xml +++ b/dhp-workflows/dhp-broker-events/pom.xml @@ -44,7 +44,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} eu.dnetlib diff --git a/dhp-workflows/dhp-dedup-openaire/pom.xml b/dhp-workflows/dhp-dedup-openaire/pom.xml index 52cc149a9..f51726ac5 100644 --- a/dhp-workflows/dhp-dedup-openaire/pom.xml +++ b/dhp-workflows/dhp-dedup-openaire/pom.xml @@ -58,7 +58,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} com.arakelian diff --git a/dhp-workflows/dhp-dedup-scholexplorer/pom.xml b/dhp-workflows/dhp-dedup-scholexplorer/pom.xml index aa4070b01..7e8c7bf60 100644 --- a/dhp-workflows/dhp-dedup-scholexplorer/pom.xml +++ b/dhp-workflows/dhp-dedup-scholexplorer/pom.xml @@ -59,7 +59,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} diff --git a/dhp-workflows/dhp-doiboost/pom.xml b/dhp-workflows/dhp-doiboost/pom.xml index 624dd7b31..f9f932909 100644 --- a/dhp-workflows/dhp-doiboost/pom.xml +++ b/dhp-workflows/dhp-doiboost/pom.xml @@ -66,7 +66,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} com.jayway.jsonpath diff --git a/dhp-workflows/dhp-enrichment/pom.xml b/dhp-workflows/dhp-enrichment/pom.xml index d0ab77cc5..4bac77c5d 100644 --- a/dhp-workflows/dhp-enrichment/pom.xml +++ b/dhp-workflows/dhp-enrichment/pom.xml @@ -27,7 +27,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} org.apache.spark diff --git a/dhp-workflows/dhp-graph-mapper/pom.xml b/dhp-workflows/dhp-graph-mapper/pom.xml index 9a5d5033b..b773e6123 100644 --- a/dhp-workflows/dhp-graph-mapper/pom.xml +++ b/dhp-workflows/dhp-graph-mapper/pom.xml @@ -85,7 +85,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} com.jayway.jsonpath diff --git a/dhp-workflows/dhp-graph-provision-scholexplorer/pom.xml b/dhp-workflows/dhp-graph-provision-scholexplorer/pom.xml index b287e9c88..3420f6607 100644 --- a/dhp-workflows/dhp-graph-provision-scholexplorer/pom.xml +++ b/dhp-workflows/dhp-graph-provision-scholexplorer/pom.xml @@ -60,7 +60,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} org.apache.httpcomponents diff --git a/dhp-workflows/dhp-graph-provision/pom.xml b/dhp-workflows/dhp-graph-provision/pom.xml index 0d44d8e5e..6446a542e 100644 --- a/dhp-workflows/dhp-graph-provision/pom.xml +++ b/dhp-workflows/dhp-graph-provision/pom.xml @@ -164,7 +164,6 @@ eu.dnetlib.dhp dhp-schemas - ${project.version} diff --git a/pom.xml b/pom.xml index fdd07c97a..4761fd31f 100644 --- a/pom.xml +++ b/pom.xml @@ -19,7 +19,6 @@ dhp-build - dhp-schemas dhp-common dhp-workflows @@ -118,6 +117,11 @@ + + eu.dnetlib.dhp + dhp-schemas + ${dhp.schemas.version} + org.apache.hadoop hadoop-hdfs @@ -692,6 +696,7 @@ 1.8 2.22.2 2.0.1 + 2.2.4 cdh5.9.2 2.6.0-${dhp.cdh.version} 4.1.0-${dhp.cdh.version} From 6d5c14e03060487af2a712aa4752081d5c599c1f Mon Sep 17 00:00:00 2001 From: miconis Date: Tue, 27 Apr 2021 09:47:49 +0200 Subject: [PATCH 2/7] assertions updated in entity merger test --- .../eu/dnetlib/dhp/oa/dedup/EntityMergerTest.java | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/EntityMergerTest.java b/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/EntityMergerTest.java index 787295c41..654ede498 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/EntityMergerTest.java +++ b/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/EntityMergerTest.java @@ -64,7 +64,7 @@ public class EntityMergerTest implements Serializable { assertEquals("OPEN SOURCE", merged.getBestaccessright().getClassid()); - assertEquals("50|doi_dedup___::0968af610a356656706657e4f234b340", merged.getId()); + assertEquals(dedupId, merged.getId()); } @@ -75,7 +75,7 @@ public class EntityMergerTest implements Serializable { .entityMerger(dedupId, publications.iterator(), 0, dataInfo, Publication.class); // verify id - assertEquals("50|doi_dedup___::0968af610a356656706657e4f234b340", pub_merged.getId()); + assertEquals(dedupId, pub_merged.getId()); assertEquals(pub_top.getJournal(), pub_merged.getJournal()); assertEquals("OPEN", pub_merged.getBestaccessright().getClassid()); @@ -131,7 +131,7 @@ public class EntityMergerTest implements Serializable { .entityMerger(dedupId, publications2.iterator(), 0, dataInfo, Publication.class); // verify id - assertEquals("50|doi_dedup___::0ca46ff10b2b4c756191719d85302b14", pub_merged.getId()); + assertEquals(dedupId, pub_merged.getId()); assertEquals(27, pub_merged.getAuthor().size()); } @@ -143,7 +143,7 @@ public class EntityMergerTest implements Serializable { .entityMerger(dedupId, publications3.iterator(), 0, dataInfo, Publication.class); // verify id - assertEquals("50|doi_dedup___::0ca46ff10b2b4c756191719d85302b14", pub_merged.getId()); + assertEquals(dedupId, pub_merged.getId()); } @Test @@ -153,7 +153,7 @@ public class EntityMergerTest implements Serializable { .entityMerger(dedupId, publications4.iterator(), 0, dataInfo, Publication.class); // verify id - assertEquals("50|dedup_wf_001::0ca46ff10b2b4c756191719d85302b14", pub_merged.getId()); + assertEquals(dedupId, pub_merged.getId()); } @Test @@ -170,7 +170,7 @@ public class EntityMergerTest implements Serializable { .entityMerger(dedupId, publications5.iterator(), 0, dataInfo, Publication.class); // verify id - assertEquals("50|dedup_wf_001::0ca46ff10b2b4c756191719d85302b14", pub_merged.getId()); + assertEquals(dedupId, pub_merged.getId()); } public DataInfo setDI() { From ef4bfd82e25ff72e72aeef16624d30b0797a9b57 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Tue, 27 Apr 2021 10:09:31 +0200 Subject: [PATCH 3/7] code formatting --- .../dhp/oa/dedup/SparkPropagateRelation.java | 21 ++++++++++--------- 1 file changed, 11 insertions(+), 10 deletions(-) diff --git a/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/SparkPropagateRelation.java b/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/SparkPropagateRelation.java index 2acec6546..1fe83cec2 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/SparkPropagateRelation.java +++ b/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/SparkPropagateRelation.java @@ -73,7 +73,7 @@ public class SparkPropagateRelation extends AbstractSparkAction { .load(DedupUtility.createMergeRelPath(workingPath, "*", "*")) .as(Encoders.bean(Relation.class)); - // + // Dataset> mergedIds = mergeRels .where(col("relClass").equalTo(ModelConstants.MERGES)) .select(col("source"), col("target")) @@ -116,31 +116,32 @@ public class SparkPropagateRelation extends AbstractSparkAction { .map((MapFunction, Relation>) t -> t._2(), Encoders.bean(Relation.class)); } - //redirect the relations to the dedupID + // redirect the relations to the dedupID private static Dataset createNewRels( - Dataset rels, //all the relations to be redirected - Dataset> mergedIds, //merge rels: + Dataset rels, // all the relations to be redirected + Dataset> mergedIds, // merge rels: MapFunction, Tuple2>, Tuple2>, Relation> mapRel) { - // + // Dataset> mapped = rels .map( (MapFunction>) r -> new Tuple3<>(getId(r, FieldType.SOURCE), r, getId(r, FieldType.TARGET)), Encoders.tuple(Encoders.STRING(), Encoders.kryo(Relation.class), Encoders.STRING())); - //< , > + // < , > Dataset, Tuple2>> relSource = mapped .joinWith(mergedIds, mapped.col("_1").equalTo(mergedIds.col("_1")), "left_outer"); - //< <, >, > + // < <, >, > Dataset, Tuple2>, Tuple2>> relSourceTarget = relSource - .joinWith(mergedIds, relSource.col("_1._3").equalTo(mergedIds.col("_1")), "left_outer"); + .joinWith(mergedIds, relSource.col("_1._3").equalTo(mergedIds.col("_1")), "left_outer"); return relSourceTarget .filter( - (FilterFunction, Tuple2>, Tuple2>>) - r -> r._1()._1() != null || r._2() != null) + (FilterFunction, Tuple2>, Tuple2>>) r -> r + ._1() + ._1() != null || r._2() != null) .map(mapRel, Encoders.bean(Relation.class)) .distinct(); } From fa42026590cad475e786eae85d568954b30768db Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Tue, 27 Apr 2021 10:10:06 +0200 Subject: [PATCH 4/7] fixed PersonCleaner extension functions --- .../transformation/TransformSparkJobNode.java | 2 +- .../transformation/xslt/PersonCleaner.java | 36 ++++++++----------- ...enaire_datacite_ExchangeLandingpagePid.xsl | 12 ------- 3 files changed, 15 insertions(+), 35 deletions(-) diff --git a/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/transformation/TransformSparkJobNode.java b/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/transformation/TransformSparkJobNode.java index a4ddd367b..5ef26b7d5 100644 --- a/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/transformation/TransformSparkJobNode.java +++ b/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/transformation/TransformSparkJobNode.java @@ -156,7 +156,7 @@ public class TransformSparkJobNode { * @return */ private static int getRepartitionNumber(long totalInput, Integer rpt) { - return (int) (totalInput / rpt); + return Math.max(1, (int) (totalInput / rpt)); } } diff --git a/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/transformation/xslt/PersonCleaner.java b/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/transformation/xslt/PersonCleaner.java index 069060722..c4cf345f0 100644 --- a/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/transformation/xslt/PersonCleaner.java +++ b/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/transformation/xslt/PersonCleaner.java @@ -4,7 +4,6 @@ package eu.dnetlib.dhp.transformation.xslt; import static eu.dnetlib.dhp.transformation.xslt.XSLTTransformationFunction.QNAME_BASE_URI; import java.io.Serializable; -// import java.nio.charset.Charset; import java.nio.charset.StandardCharsets; import java.text.Normalizer; import java.util.List; @@ -18,22 +17,10 @@ import com.google.common.hash.Hashing; import eu.dnetlib.dhp.transformation.xslt.utils.Capitalize; import eu.dnetlib.dhp.transformation.xslt.utils.DotAbbreviations; -import net.sf.saxon.s9api.ExtensionFunction; -import net.sf.saxon.s9api.ItemType; -import net.sf.saxon.s9api.OccurrenceIndicator; -import net.sf.saxon.s9api.QName; -import net.sf.saxon.s9api.SaxonApiException; -import net.sf.saxon.s9api.SequenceType; -import net.sf.saxon.s9api.XdmValue; - -//import eu.dnetlib.pace.clustering.NGramUtils; -//import eu.dnetlib.pace.util.Capitalise; -//import eu.dnetlib.pace.util.DotAbbreviations; +import net.sf.saxon.s9api.*; public class PersonCleaner implements ExtensionFunction, Serializable { - /** - * - */ + private static final long serialVersionUID = 1L; private List firstname = Lists.newArrayList(); private List surname = Lists.newArrayList(); @@ -45,7 +32,7 @@ public class PersonCleaner implements ExtensionFunction, Serializable { } - public String normalize(String s) { + private String normalize(String s) { s = Normalizer.normalize(s, Normalizer.Form.NFD); // was NFD s = s.replaceAll("\\(.+\\)", ""); s = s.replaceAll("\\[.+\\]", ""); @@ -184,7 +171,7 @@ public class PersonCleaner implements ExtensionFunction, Serializable { @Override public QName getName() { - return new QName(QNAME_BASE_URI + "/person", "person"); + return new QName(QNAME_BASE_URI + "/person", "normalize"); } @Override @@ -194,13 +181,18 @@ public class PersonCleaner implements ExtensionFunction, Serializable { @Override public SequenceType[] getArgumentTypes() { - // TODO Auto-generated method stub - return null; + return new SequenceType[] { + SequenceType.makeSequenceType(ItemType.STRING, OccurrenceIndicator.ZERO_OR_ONE) + }; } @Override - public XdmValue call(XdmValue[] arguments) throws SaxonApiException { - // TODO Auto-generated method stub - return null; + public XdmValue call(XdmValue[] xdmValues) throws SaxonApiException { + XdmValue r = xdmValues[0]; + if (r.size() == 0) { + return new XdmAtomicValue(""); + } + final String currentValue = xdmValues[0].itemAt(0).getStringValue(); + return new XdmAtomicValue(normalize(currentValue)); } } diff --git a/dhp-workflows/dhp-aggregation/src/test/resources/eu/dnetlib/dhp/transform/scripts/xslt_cleaning_oaiOpenaire_datacite_ExchangeLandingpagePid.xsl b/dhp-workflows/dhp-aggregation/src/test/resources/eu/dnetlib/dhp/transform/scripts/xslt_cleaning_oaiOpenaire_datacite_ExchangeLandingpagePid.xsl index 56451505e..46fcfd7cb 100644 --- a/dhp-workflows/dhp-aggregation/src/test/resources/eu/dnetlib/dhp/transform/scripts/xslt_cleaning_oaiOpenaire_datacite_ExchangeLandingpagePid.xsl +++ b/dhp-workflows/dhp-aggregation/src/test/resources/eu/dnetlib/dhp/transform/scripts/xslt_cleaning_oaiOpenaire_datacite_ExchangeLandingpagePid.xsl @@ -68,12 +68,6 @@ - - - record is not compliant, transformation is interrupted. - - - @@ -282,9 +276,6 @@ - - - @@ -310,9 +301,6 @@ --> - - - From 82de6fb634e1f1beb19eab46dec906cfa851a543 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Tue, 27 Apr 2021 10:10:50 +0200 Subject: [PATCH 5/7] dhp-schema moved to dedicated module https://code-repo.d4science.org/D-Net/dhp-schemas --- .../dhp/schema/mdstore/MetadataRecord.java | 123 ------------------ .../dhp/schema/mdstore/Provenance.java | 52 -------- .../dnetlib/dhp/schema/oaf/AccessRight.java | 48 ------- .../dhp/schema/oaf/OpenAccessRoute.java | 13 -- .../dhp/schema/orcid/AuthorHistory.java | 79 ----------- .../dhp/schema/orcid/AuthorSummary.java | 25 ---- .../dnetlib/dhp/schema/orcid/Contributor.java | 58 --------- .../dnetlib/dhp/schema/orcid/ExternalId.java | 38 ------ .../dnetlib/dhp/schema/orcid/OrcidData.java | 34 ----- .../dhp/schema/orcid/PublicationDate.java | 38 ------ .../eu/dnetlib/dhp/schema/orcid/Summary.java | 79 ----------- .../eu/dnetlib/dhp/schema/orcid/Work.java | 16 --- .../dnetlib/dhp/schema/orcid/WorkDetail.java | 109 ---------------- 13 files changed, 712 deletions(-) delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/mdstore/MetadataRecord.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/mdstore/Provenance.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/AccessRight.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OpenAccessRoute.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorHistory.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorSummary.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Contributor.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/ExternalId.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/OrcidData.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/PublicationDate.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Summary.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Work.java delete mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/WorkDetail.java diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/mdstore/MetadataRecord.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/mdstore/MetadataRecord.java deleted file mode 100644 index 8277e1469..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/mdstore/MetadataRecord.java +++ /dev/null @@ -1,123 +0,0 @@ - -package eu.dnetlib.dhp.schema.mdstore; - -import java.io.Serializable; - -import eu.dnetlib.dhp.schema.common.ModelSupport; - -/** - * This class models a record in a Metadata store collection on HDFS - */ -public class MetadataRecord implements Serializable { - - /** The D-Net Identifier associated to the record */ - private String id; - - /** The original Identifier of the record */ - private String originalId; - - /** The encoding of the record, should be JSON or XML */ - private String encoding; - - /** - * The information about the provenance of the record see @{@link Provenance} for the model of this information - */ - private Provenance provenance; - - /** The content of the metadata */ - private String body; - - /** the date when the record has been stored */ - private Long dateOfCollection; - - /** the date when the record has been stored */ - private Long dateOfTransformation; - - public MetadataRecord() { - - } - - public MetadataRecord( - String originalId, - String encoding, - Provenance provenance, - String body, - Long dateOfCollection) { - - this.originalId = originalId; - this.encoding = encoding; - this.provenance = provenance; - this.body = body; - this.dateOfCollection = dateOfCollection; - this.id = ModelSupport.generateIdentifier(originalId, this.provenance.getNsPrefix()); - } - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public String getOriginalId() { - return originalId; - } - - public void setOriginalId(String originalId) { - this.originalId = originalId; - } - - public String getEncoding() { - return encoding; - } - - public void setEncoding(String encoding) { - this.encoding = encoding; - } - - public Provenance getProvenance() { - return provenance; - } - - public void setProvenance(Provenance provenance) { - this.provenance = provenance; - } - - public String getBody() { - return body; - } - - public void setBody(String body) { - this.body = body; - } - - public Long getDateOfCollection() { - return dateOfCollection; - } - - public void setDateOfCollection(Long dateOfCollection) { - this.dateOfCollection = dateOfCollection; - } - - public Long getDateOfTransformation() { - return dateOfTransformation; - } - - public void setDateOfTransformation(Long dateOfTransformation) { - this.dateOfTransformation = dateOfTransformation; - } - - @Override - public boolean equals(Object o) { - if (!(o instanceof MetadataRecord)) { - return false; - } - return ((MetadataRecord) o).getId().equalsIgnoreCase(id); - } - - @Override - public int hashCode() { - return id.hashCode(); - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/mdstore/Provenance.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/mdstore/Provenance.java deleted file mode 100644 index 8af58f628..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/mdstore/Provenance.java +++ /dev/null @@ -1,52 +0,0 @@ - -package eu.dnetlib.dhp.schema.mdstore; - -import java.io.Serializable; - -/** - * @author Sandro La Bruzzo - *

- * Provenace class models the provenance of the record in the metadataStore It contains the identifier and the - * name of the datasource that gives the record - */ -public class Provenance implements Serializable { - - private String datasourceId; - - private String datasourceName; - - private String nsPrefix; - - public Provenance() { - } - - public Provenance(String datasourceId, String datasourceName, String nsPrefix) { - this.datasourceId = datasourceId; - this.datasourceName = datasourceName; - this.nsPrefix = nsPrefix; - } - - public String getDatasourceId() { - return datasourceId; - } - - public void setDatasourceId(String datasourceId) { - this.datasourceId = datasourceId; - } - - public String getDatasourceName() { - return datasourceName; - } - - public void setDatasourceName(String datasourceName) { - this.datasourceName = datasourceName; - } - - public String getNsPrefix() { - return nsPrefix; - } - - public void setNsPrefix(String nsPrefix) { - this.nsPrefix = nsPrefix; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/AccessRight.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/AccessRight.java deleted file mode 100644 index 47de36504..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/AccessRight.java +++ /dev/null @@ -1,48 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -import java.util.Optional; - -/** - * This class models the access rights of research products. - */ -public class AccessRight extends Qualifier { - - private OpenAccessRoute openAccessRoute; - - public OpenAccessRoute getOpenAccessRoute() { - return openAccessRoute; - } - - public void setOpenAccessRoute(OpenAccessRoute openAccessRoute) { - this.openAccessRoute = openAccessRoute; - } - - public String toComparableString() { - String s = super.toComparableString(); - return Optional - .ofNullable(getOpenAccessRoute()) - .map(x -> s + "::" + x.toString()) - .orElse(s); - } - - @Override - public int hashCode() { - return toComparableString().hashCode(); - } - - @Override - public boolean equals(Object obj) { - if (this == obj) - return true; - if (obj == null) - return false; - if (getClass() != obj.getClass()) - return false; - - Qualifier other = (Qualifier) obj; - - return toComparableString().equals(other.toComparableString()); - } - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OpenAccessRoute.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OpenAccessRoute.java deleted file mode 100644 index bec550411..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OpenAccessRoute.java +++ /dev/null @@ -1,13 +0,0 @@ - -package eu.dnetlib.dhp.schema.oaf; - -/** - * This Enum models the OpenAccess status, currently including only the values from Unpaywall - * - * https://support.unpaywall.org/support/solutions/articles/44001777288-what-do-the-types-of-oa-status-green-gold-hybrid-and-bronze-mean- - */ -public enum OpenAccessRoute { - - gold, green, hybrid, bronze - -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorHistory.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorHistory.java deleted file mode 100644 index 554aae82c..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorHistory.java +++ /dev/null @@ -1,79 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; - -public class AuthorHistory implements Serializable { - private String creationMethod; - private String completionDate; - private String submissionDate; - private String lastModifiedDate; - private boolean claimed; - private String deactivationDate; - private boolean verifiedEmail; - private boolean verifiedPrimaryEmail; - - public String getCreationMethod() { - return creationMethod; - } - - public void setCreationMethod(String creationMethod) { - this.creationMethod = creationMethod; - } - - public String getCompletionDate() { - return completionDate; - } - - public void setCompletionDate(String completionDate) { - this.completionDate = completionDate; - } - - public String getSubmissionDate() { - return submissionDate; - } - - public void setSubmissionDate(String submissionDate) { - this.submissionDate = submissionDate; - } - - public String getLastModifiedDate() { - return lastModifiedDate; - } - - public void setLastModifiedDate(String lastModifiedDate) { - this.lastModifiedDate = lastModifiedDate; - } - - public boolean isClaimed() { - return claimed; - } - - public void setClaimed(boolean claimed) { - this.claimed = claimed; - } - - public String getDeactivationDate() { - return deactivationDate; - } - - public void setDeactivationDate(String deactivationDate) { - this.deactivationDate = deactivationDate; - } - - public boolean isVerifiedEmail() { - return verifiedEmail; - } - - public void setVerifiedEmail(boolean verifiedEmail) { - this.verifiedEmail = verifiedEmail; - } - - public boolean isVerifiedPrimaryEmail() { - return verifiedPrimaryEmail; - } - - public void setVerifiedPrimaryEmail(boolean verifiedPrimaryEmail) { - this.verifiedPrimaryEmail = verifiedPrimaryEmail; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorSummary.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorSummary.java deleted file mode 100644 index 794576628..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/AuthorSummary.java +++ /dev/null @@ -1,25 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; - -public class AuthorSummary extends OrcidData implements Serializable { - private AuthorData authorData; - private AuthorHistory authorHistory; - - public AuthorData getAuthorData() { - return authorData; - } - - public void setAuthorData(AuthorData authorData) { - this.authorData = authorData; - } - - public AuthorHistory getAuthorHistory() { - return authorHistory; - } - - public void setAuthorHistory(AuthorHistory authorHistory) { - this.authorHistory = authorHistory; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Contributor.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Contributor.java deleted file mode 100644 index 3b543db4b..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Contributor.java +++ /dev/null @@ -1,58 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; - -import eu.dnetlib.dhp.schema.orcid.AuthorData; - -/** - * This class models the data related to a contributor, that are retrieved from an orcid publication - */ - -public class Contributor extends AuthorData implements Serializable { - private String sequence; - private String role; - private transient boolean simpleMatch; - private transient Double score; - private transient boolean bestMatch; - - public String getSequence() { - return sequence; - } - - public void setSequence(String sequence) { - this.sequence = sequence; - } - - public String getRole() { - return role; - } - - public void setRole(String role) { - this.role = role; - } - - public boolean isSimpleMatch() { - return simpleMatch; - } - - public void setSimpleMatch(boolean simpleMatch) { - this.simpleMatch = simpleMatch; - } - - public Double getScore() { - return score; - } - - public void setScore(Double score) { - this.score = score; - } - - public boolean isBestMatch() { - return bestMatch; - } - - public void setBestMatch(boolean bestMatch) { - this.bestMatch = bestMatch; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/ExternalId.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/ExternalId.java deleted file mode 100644 index d8f001aa5..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/ExternalId.java +++ /dev/null @@ -1,38 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; - -/** - * This class models the data related to external id, that are retrieved from an orcid publication - */ - -public class ExternalId implements Serializable { - private String type; - private String value; - private String relationShip; - - public String getType() { - return type; - } - - public void setType(String type) { - this.type = type; - } - - public String getValue() { - return value; - } - - public void setValue(String value) { - this.value = value; - } - - public String getRelationShip() { - return relationShip; - } - - public void setRelationShip(String relationShip) { - this.relationShip = relationShip; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/OrcidData.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/OrcidData.java deleted file mode 100644 index 606eea6a8..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/OrcidData.java +++ /dev/null @@ -1,34 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; - -public class OrcidData implements Serializable { - protected String base64CompressData; - protected String statusCode; - protected String downloadDate; - - public String getBase64CompressData() { - return base64CompressData; - } - - public void setBase64CompressData(String base64CompressData) { - this.base64CompressData = base64CompressData; - } - - public String getStatusCode() { - return statusCode; - } - - public void setStatusCode(String statusCode) { - this.statusCode = statusCode; - } - - public String getDownloadDate() { - return downloadDate; - } - - public void setDownloadDate(String downloadDate) { - this.downloadDate = downloadDate; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/PublicationDate.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/PublicationDate.java deleted file mode 100644 index 01972ce95..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/PublicationDate.java +++ /dev/null @@ -1,38 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; - -/** - * This class models the data related to a publication date, that are retrieved from an orcid publication - */ - -public class PublicationDate implements Serializable { - private String year; - private String month; - private String day; - - public String getYear() { - return year; - } - - public void setYear(String year) { - this.year = year; - } - - public String getMonth() { - return month; - } - - public void setMonth(String month) { - this.month = month; - } - - public String getDay() { - return day; - } - - public void setDay(String day) { - this.day = day; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Summary.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Summary.java deleted file mode 100644 index ffebf5021..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Summary.java +++ /dev/null @@ -1,79 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; - -public class Summary implements Serializable { - private String creationMethod; - private String completionDate; - private String submissionDate; - private String lastModifiedDate; - private boolean claimed; - private String deactivationDate; - private boolean verifiedEmail; - private boolean verifiedPrimaryEmail; - - public String getCreationMethod() { - return creationMethod; - } - - public void setCreationMethod(String creationMethod) { - this.creationMethod = creationMethod; - } - - public String getCompletionDate() { - return completionDate; - } - - public void setCompletionDate(String completionDate) { - this.completionDate = completionDate; - } - - public String getSubmissionDate() { - return submissionDate; - } - - public void setSubmissionDate(String submissionDate) { - this.submissionDate = submissionDate; - } - - public String getLastModifiedDate() { - return lastModifiedDate; - } - - public void setLastModifiedDate(String lastModifiedDate) { - this.lastModifiedDate = lastModifiedDate; - } - - public boolean isClaimed() { - return claimed; - } - - public void setClaimed(boolean claimed) { - this.claimed = claimed; - } - - public String getDeactivationDate() { - return deactivationDate; - } - - public void setDeactivationDate(String deactivationDate) { - this.deactivationDate = deactivationDate; - } - - public boolean isVerifiedEmail() { - return verifiedEmail; - } - - public void setVerifiedEmail(boolean verifiedEmail) { - this.verifiedEmail = verifiedEmail; - } - - public boolean isVerifiedPrimaryEmail() { - return verifiedPrimaryEmail; - } - - public void setVerifiedPrimaryEmail(boolean verifiedPrimaryEmail) { - this.verifiedPrimaryEmail = verifiedPrimaryEmail; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Work.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Work.java deleted file mode 100644 index c557eb5d2..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/Work.java +++ /dev/null @@ -1,16 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; - -public class Work extends OrcidData implements Serializable { - WorkDetail workDetail; - - public WorkDetail getWorkDetail() { - return workDetail; - } - - public void setWorkDetail(WorkDetail workDetail) { - this.workDetail = workDetail; - } -} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/WorkDetail.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/WorkDetail.java deleted file mode 100644 index 614d415c1..000000000 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/orcid/WorkDetail.java +++ /dev/null @@ -1,109 +0,0 @@ - -package eu.dnetlib.dhp.schema.orcid; - -import java.io.Serializable; -import java.util.List; - -import eu.dnetlib.dhp.schema.orcid.Contributor; -import eu.dnetlib.dhp.schema.orcid.ExternalId; -import eu.dnetlib.dhp.schema.orcid.OrcidData; -import eu.dnetlib.dhp.schema.orcid.PublicationDate; - -/** - * This class models the data that are retrieved from orcid publication - */ - -public class WorkDetail implements Serializable { - - private String oid; - private String id; - private String sourceName; - private String type; - private List titles; - private List urls; - List extIds; - List publicationDates; - List contributors; - - public String getOid() { - return oid; - } - - public void setOid(String oid) { - this.oid = oid; - } - - public String getErrorCode() { - return errorCode; - } - - public void setErrorCode(String errorCode) { - this.errorCode = errorCode; - } - - private String errorCode; - - public String getId() { - return id; - } - - public void setId(String id) { - this.id = id; - } - - public List getTitles() { - return titles; - } - - public void setTitles(List titles) { - this.titles = titles; - } - - public String getSourceName() { - return sourceName; - } - - public void setSourceName(String sourceName) { - this.sourceName = sourceName; - } - - public String getType() { - return type; - } - - public void setType(String type) { - this.type = type; - } - - public List getUrls() { - return urls; - } - - public void setUrls(List urls) { - this.urls = urls; - } - - public List getExtIds() { - return extIds; - } - - public void setExtIds(List extIds) { - this.extIds = extIds; - } - - public List getPublicationDates() { - return publicationDates; - } - - public void setPublicationDates(List publicationDates) { - this.publicationDates = publicationDates; - } - - public List getContributors() { - return contributors; - } - - public void setContributors(List contributors) { - this.contributors = contributors; - } -} From a7cf449b362d6ec2bc53f4202886564245ecc90b Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Tue, 27 Apr 2021 10:11:26 +0200 Subject: [PATCH 6/7] cleanup --- dhp-workflows/dhp-broker-events/report.xml | 37 ---------------------- 1 file changed, 37 deletions(-) delete mode 100644 dhp-workflows/dhp-broker-events/report.xml diff --git a/dhp-workflows/dhp-broker-events/report.xml b/dhp-workflows/dhp-broker-events/report.xml deleted file mode 100644 index 6e706f723..000000000 --- a/dhp-workflows/dhp-broker-events/report.xml +++ /dev/null @@ -1,37 +0,0 @@ - - - - Feature Extraction - - - TCPFLOW - 1.5.0 - - 4.2.1 (4.2.1 Compatible Apple LLVM 11.0.0 (clang-1100.0.33.8)) - -D_THREAD_SAFE -pthread -I/usr/local/include -I/usr/local/include -DUTC_OFFSET=+0000 - -g -D_THREAD_SAFE -pthread -g -O3 -MD -Wpointer-arith -Wmissing-declarations -Wmissing-prototypes -Wshadow -Wwrite-strings -Wcast-align -Waggregate-return -Wbad-function-cast -Wcast-qual -Wundef -Wredundant-decls -Wdisabled-optimization -Wfloat-equal -Wmultichar -Wc++-compat -Wmissing-noreturn -Wall -Wstrict-prototypes -MD -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wmissing-declarations -Wmissing-prototypes -Wshadow -Wwrite-strings -Wcast-align -Waggregate-return -Wbad-function-cast -Wcast-qual -Wundef -Wredundant-decls -Wdisabled-optimization -Wfloat-equal -Wmultichar -Wc++-compat -Wmissing-noreturn -Wall -Wstrict-prototypes - -g -D_THREAD_SAFE -pthread -g -O3 -Wall -MD -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wshadow -Wwrite-strings -Wcast-align -Wredundant-decls -Wdisabled-optimization -Wfloat-equal -Wmultichar -Wmissing-noreturn -Woverloaded-virtual -Wsign-promo -funit-at-a-time -Weffc++ -std=c++11 -Wall -MD -D_FORTIFY_SOURCE=2 -Wpointer-arith -Wshadow -Wwrite-strings -Wcast-align -Wredundant-decls -Wdisabled-optimization -Wfloat-equal -Wmultichar -Wmissing-noreturn -Woverloaded-virtual -Wsign-promo -funit-at-a-time -Weffc++ - -L/usr/local/lib -L/usr/local/lib - -lpython2.7 -lpython2.7 -lpcap -lbz2 -lexpat -lsqlite3 -lcrypto -lssl -lcrypto -ldl -lz - 2019-10-11T01:16:58 - - - - - Darwin - 19.5.0 - Darwin Kernel Version 19.5.0: Tue May 26 20:41:44 PDT 2020; root:xnu-6153.121.2~2/RELEASE_X86_64 - Micheles-MBP.local - x86_64 - tcpflow - 501 - michele - 2020-06-15T14:55:03Z - - - - - 0 From 27ab8a704d75f08d2b488d709d2539e335d718b4 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Tue, 27 Apr 2021 10:12:27 +0200 Subject: [PATCH 7/7] adjusted poms to align with the external dhp-schema module --- dhp-common/pom.xml | 1 + dhp-workflows/dhp-actionmanager/pom.xml | 5 --- dhp-workflows/dhp-aggregation/pom.xml | 6 ---- dhp-workflows/dhp-blacklist/pom.xml | 5 --- dhp-workflows/dhp-broker-events/pom.xml | 5 +-- dhp-workflows/dhp-dedup-openaire/pom.xml | 5 +-- dhp-workflows/dhp-dedup-scholexplorer/pom.xml | 4 --- dhp-workflows/dhp-doiboost/pom.xml | 4 --- dhp-workflows/dhp-enrichment/pom.xml | 5 +-- dhp-workflows/dhp-graph-mapper/pom.xml | 5 +-- .../dhp-graph-provision-scholexplorer/pom.xml | 6 +--- dhp-workflows/dhp-graph-provision/pom.xml | 5 --- pom.xml | 36 ++++++++----------- 13 files changed, 20 insertions(+), 72 deletions(-) diff --git a/dhp-common/pom.xml b/dhp-common/pom.xml index acac3594f..9f6bf78d5 100644 --- a/dhp-common/pom.xml +++ b/dhp-common/pom.xml @@ -107,6 +107,7 @@ eu.dnetlib.dhp dhp-schemas + stable_ids diff --git a/dhp-workflows/dhp-actionmanager/pom.xml b/dhp-workflows/dhp-actionmanager/pom.xml index 6dc33e76b..a1173ad75 100644 --- a/dhp-workflows/dhp-actionmanager/pom.xml +++ b/dhp-workflows/dhp-actionmanager/pom.xml @@ -56,11 +56,6 @@ dnet-openaire-data-protos - - eu.dnetlib.dhp - dhp-schemas - - eu.dnetlib dnet-actionmanager-api diff --git a/dhp-workflows/dhp-aggregation/pom.xml b/dhp-workflows/dhp-aggregation/pom.xml index fcea2b19e..294287008 100644 --- a/dhp-workflows/dhp-aggregation/pom.xml +++ b/dhp-workflows/dhp-aggregation/pom.xml @@ -60,12 +60,6 @@ ${project.version} - - eu.dnetlib.dhp - dhp-schemas - - - net.sf.saxon Saxon-HE diff --git a/dhp-workflows/dhp-blacklist/pom.xml b/dhp-workflows/dhp-blacklist/pom.xml index 185c53ab7..047767d33 100644 --- a/dhp-workflows/dhp-blacklist/pom.xml +++ b/dhp-workflows/dhp-blacklist/pom.xml @@ -14,11 +14,6 @@ dhp-common ${project.version} - - eu.dnetlib.dhp - dhp-schemas - - org.apache.spark spark-core_2.11 diff --git a/dhp-workflows/dhp-broker-events/pom.xml b/dhp-workflows/dhp-broker-events/pom.xml index 4ae818e3c..afbd93dcb 100644 --- a/dhp-workflows/dhp-broker-events/pom.xml +++ b/dhp-workflows/dhp-broker-events/pom.xml @@ -41,10 +41,7 @@ dhp-common ${project.version} - - eu.dnetlib.dhp - dhp-schemas - + eu.dnetlib dnet-pace-core diff --git a/dhp-workflows/dhp-dedup-openaire/pom.xml b/dhp-workflows/dhp-dedup-openaire/pom.xml index f51726ac5..f47f8ba6e 100644 --- a/dhp-workflows/dhp-dedup-openaire/pom.xml +++ b/dhp-workflows/dhp-dedup-openaire/pom.xml @@ -55,10 +55,7 @@ dhp-common ${project.version} - - eu.dnetlib.dhp - dhp-schemas - + com.arakelian java-jq diff --git a/dhp-workflows/dhp-dedup-scholexplorer/pom.xml b/dhp-workflows/dhp-dedup-scholexplorer/pom.xml index 7e8c7bf60..14959d630 100644 --- a/dhp-workflows/dhp-dedup-scholexplorer/pom.xml +++ b/dhp-workflows/dhp-dedup-scholexplorer/pom.xml @@ -56,10 +56,6 @@ dhp-common ${project.version} - - eu.dnetlib.dhp - dhp-schemas - eu.dnetlib diff --git a/dhp-workflows/dhp-doiboost/pom.xml b/dhp-workflows/dhp-doiboost/pom.xml index f9f932909..f496ea9a2 100644 --- a/dhp-workflows/dhp-doiboost/pom.xml +++ b/dhp-workflows/dhp-doiboost/pom.xml @@ -63,10 +63,6 @@ - - eu.dnetlib.dhp - dhp-schemas - com.jayway.jsonpath json-path diff --git a/dhp-workflows/dhp-enrichment/pom.xml b/dhp-workflows/dhp-enrichment/pom.xml index 4bac77c5d..6f638b188 100644 --- a/dhp-workflows/dhp-enrichment/pom.xml +++ b/dhp-workflows/dhp-enrichment/pom.xml @@ -24,10 +24,7 @@ dhp-common ${project.version} - - eu.dnetlib.dhp - dhp-schemas - + org.apache.spark spark-hive_2.11 diff --git a/dhp-workflows/dhp-graph-mapper/pom.xml b/dhp-workflows/dhp-graph-mapper/pom.xml index b773e6123..5e1c670c3 100644 --- a/dhp-workflows/dhp-graph-mapper/pom.xml +++ b/dhp-workflows/dhp-graph-mapper/pom.xml @@ -82,10 +82,7 @@ dhp-common ${project.version} - - eu.dnetlib.dhp - dhp-schemas - + com.jayway.jsonpath json-path diff --git a/dhp-workflows/dhp-graph-provision-scholexplorer/pom.xml b/dhp-workflows/dhp-graph-provision-scholexplorer/pom.xml index 3420f6607..188e0debc 100644 --- a/dhp-workflows/dhp-graph-provision-scholexplorer/pom.xml +++ b/dhp-workflows/dhp-graph-provision-scholexplorer/pom.xml @@ -55,12 +55,8 @@ eu.dnetlib.dhp dhp-common ${project.version} + - - - eu.dnetlib.dhp - dhp-schemas - org.apache.httpcomponents httpmime diff --git a/dhp-workflows/dhp-graph-provision/pom.xml b/dhp-workflows/dhp-graph-provision/pom.xml index 6446a542e..e9bbf63c4 100644 --- a/dhp-workflows/dhp-graph-provision/pom.xml +++ b/dhp-workflows/dhp-graph-provision/pom.xml @@ -155,16 +155,11 @@ - eu.dnetlib.dhp dhp-common ${project.version} - - eu.dnetlib.dhp - dhp-schemas - diff --git a/pom.xml b/pom.xml index 4761fd31f..12be8e5ab 100644 --- a/pom.xml +++ b/pom.xml @@ -58,6 +58,18 @@ true + + dnet45-snapshots + D-Net 45 snapshots + https://maven.d4science.org/nexus/content/repositories/dnet45-snapshots + default + + false + + + false + + cloudera Cloudera Repository @@ -69,26 +81,6 @@ false - - dnet45-releases-old - http://maven.research-infrastructures.eu/nexus/content/repositories/dnet45-releases - - false - - - false - - - - dnet45-snapshots-old - http://maven.research-infrastructures.eu/nexus/content/repositories/dnet45-snapshots - - false - - - false - - @@ -120,7 +112,8 @@ eu.dnetlib.dhp dhp-schemas - ${dhp.schemas.version} + 2.2.5-SNAPSHOT + stable_ids org.apache.hadoop @@ -696,7 +689,6 @@ 1.8 2.22.2 2.0.1 - 2.2.4 cdh5.9.2 2.6.0-${dhp.cdh.version} 4.1.0-${dhp.cdh.version}