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Changed step16-createIndicatorsTables to use a spark oozie action instead of hive

This commit is contained in:
Antonis Lempesis 2024-01-26 02:04:48 +02:00
parent fd43b0e84a
commit c548796463
2 changed files with 268 additions and 222 deletions
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424
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16-createIndicatorsTables.sql
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66
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml
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@ -64,6 +64,26 @@
<name>hadoop_user_name</name>
<description>user name of the wf owner</description>
</property>
<property>
<name>sparkSqlWarehouseDir</name>
</property>
<!-- General oozie workflow properties -->
<property>
<name>sparkClusterOpts</name>
<value>--conf spark.network.timeout=600 --conf spark.extraListeners= --conf spark.sql.queryExecutionListeners= --conf spark.yarn.historyServer.address=http://iis-cdh5-test-m3.ocean.icm.edu.pl:18088 --conf spark.eventLog.dir=hdfs://nameservice1/user/spark/applicationHistory</value>
<description>spark cluster-wide options</description>
</property>
<property>
<name>sparkResourceOpts</name>
<value>--executor-memory=3G --conf spark.executor.memoryOverhead=3G --executor-cores=6 --driver-memory=8G --driver-cores=4</value>
<description>spark resource options</description>
</property>
<property>
<name>sparkApplicationOpts</name>
<value>--conf spark.sql.shuffle.partitions=3840</value>
<description>spark resource options</description>
</property>
</parameters>
<global>
@ -82,10 +102,14 @@
<name>hive.mapjoin.followby.gby.localtask.max.memory.usage</name>
<value>0.80</value>
</property>
<property>
<name>mapred.job.queue.name</name>
<value>analytics</value>
</property>
<property>
<name>oozie.action.sharelib.for.spark</name>
<value>${oozieActionShareLibForSpark2}</value>
</property>
<property>
<name>mapred.job.queue.name</name>
<value>analytics</value>
</property>
</configuration>
</global>
@ -321,13 +345,35 @@
<error to="Kill"/>
</action>
<!-- <action name="Step16-createIndicatorsTables">-->
<!-- <hive2 xmlns="uri:oozie:hive2-action:0.1">-->
<!-- <jdbc-url>${hive_jdbc_url}</jdbc-url>-->
<!-- <script>scripts/step16-createIndicatorsTables.sql</script>-->
<!-- <param>stats_db_name=${stats_db_name}</param>-->
<!-- <param>external_stats_db_name=${external_stats_db_name}</param>-->
<!-- </hive2>-->
<!-- <ok to="Step16_1-definitions"/>-->
<!-- <error to="Kill"/>-->
<!-- </action>-->
<action name="Step16-createIndicatorsTables">
<hive2 xmlns="uri:oozie:hive2-action:0.1">
<jdbc-url>${hive_jdbc_url}</jdbc-url>
<script>scripts/step16-createIndicatorsTables.sql</script>
<param>stats_db_name=${stats_db_name}</param>
<param>external_stats_db_name=${external_stats_db_name}</param>
</hive2>
<spark xmlns="uri:oozie:spark-action:0.2">
<master>yarn</master>
<mode>cluster</mode>
<name>Step16-createIndicatorsTables</name>
<class>eu.dnetlib.dhp.oozie.RunSQLSparkJob</class>
<jar>dhp-dedup-openaire-${projectVersion}.jar</jar>
<spark-opts>
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
${sparkClusterOpts}
${sparkResourceOpts}
${sparkApplicationOpts}
</spark-opts>
<arg>--hiveMetastoreUris</arg><arg>${hive_metastore_uris}</arg>
<arg>--sql</arg><arg>eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16-createIndicatorsTables.sql</arg>
<arg>--stats_db_name</arg><arg>${stats_db_name}</arg>
<arg>--external_stats_db_name</arg><arg>${external_stats_db_name}</arg>
</spark>
<ok to="Step16_1-definitions"/>
<error to="Kill"/>
</action>