refactoring for the generation of relationships from related identifier of type 'OPENAIRE'
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@ -422,7 +422,8 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
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final Relation r2 = OafMapperUtils
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.getRelation(
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orgId, dsId, DATASOURCE_ORGANIZATION, PROVISION, PROVIDES, collectedFrom, info, lastUpdateTimestamp);
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orgId, dsId, DATASOURCE_ORGANIZATION, PROVISION, PROVIDES, collectedFrom, info,
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lastUpdateTimestamp);
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return Arrays.asList(r1, r2);
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} catch (final Exception e) {
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@ -25,6 +25,7 @@ import eu.dnetlib.dhp.common.vocabulary.VocabularyGroup;
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import eu.dnetlib.dhp.schema.oaf.*;
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import eu.dnetlib.dhp.schema.oaf.utils.CleaningFunctions;
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import eu.dnetlib.dhp.schema.oaf.utils.IdentifierFactory;
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import eu.dnetlib.dhp.schema.oaf.utils.PidType;
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public class OdfToOafMapper extends AbstractMdRecordToOafMapper {
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@ -391,75 +392,77 @@ public class OdfToOafMapper extends AbstractMdRecordToOafMapper {
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final String docId = entity.getId();
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final List<Oaf> res = new ArrayList<>();
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/*
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/*
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<datacite:relatedIdentifiers>
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<datacite:relatedIdentifier relatedIdentifierType="w3id" relationType="HasPart">https://w3id.org/ro-id/13c54585-362e-4925-a785-08afb591fa0d/resources/b4be0f3e-41d7-471f-b34e-f0bd54ff5698</datacite:relatedIdentifier>
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<datacite:relatedIdentifier relatedIdentifierType="w3id" relationType="HasPart">https://w3id.org/ro-id/13c54585-362e-4925-a785-08afb591fa0d/resources/5d6e575b-ef84-417a-9d76-61c6702f7cb2</datacite:relatedIdentifier>
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<datacite:relatedIdentifier relatedIdentifierType="w3id" relationType="HasPart">https://w3id.org/ro-id/13c54585-362e-4925-a785-08afb591fa0d/resources/35e01545-8c6d-49bd-ab98-5c152df69934</datacite:relatedIdentifier>
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</datacite:relatedIdentifiers>
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We could extend it to create the relationships targeting w3id, dois, pmcids and other pid types for which we know how to build the target openaire identifier "blindly".
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for (final Object o : doc
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.selectNodes("//*[local-name()='relatedIdentifier']")) {
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.selectNodes("//*[local-name()='relatedIdentifier']")) {
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final String originalId = ((Node) o).getText();
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final String originalId = ((Node) o).getText().trim();
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if (StringUtils.isNotBlank(originalId)) {
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final String otherId = createOpenaireId(50, originalId, false);
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final String type = ((Node) o).valueOf("@relationType");
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switch(type){
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case IS_SUPPLEMENT_TO:
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break;
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case SUPPLEMENT:
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break;
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case IS_PART_OF:
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break;
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case HAS_PART:
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break;
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final String idType = ((Node) o).valueOf("@relatedIdentifierType");
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final String reltype = ((Node) o).valueOf("@relationType");
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String otherId = guessRelatedIdentifier(idType, originalId);
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if (StringUtils.isNotBlank(otherId)) {
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if (reltype.equalsIgnoreCase(IS_SUPPLEMENT_TO)) {
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res
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.add(
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getRelation(
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docId, otherId, RESULT_RESULT, SUPPLEMENT, IS_SUPPLEMENT_TO, entity));
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res
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.add(
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getRelation(
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otherId, docId, RESULT_RESULT, SUPPLEMENT, IS_SUPPLEMENTED_BY, entity));
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} else {
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if (reltype.equalsIgnoreCase(IS_SUPPLEMENTED_BY)) {
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res
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.add(
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getRelation(
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otherId, docId, RESULT_RESULT, SUPPLEMENT, IS_SUPPLEMENT_TO, entity));
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res
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.add(
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getRelation(
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docId, otherId, RESULT_RESULT, SUPPLEMENT, IS_SUPPLEMENTED_BY, entity));
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} else {
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if (reltype.equalsIgnoreCase(IS_PART_OF)) {
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res
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.add(
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getRelation(
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docId, otherId, RESULT_RESULT, PART, IS_PART_OF, entity));
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res
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.add(
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getRelation(
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otherId, docId, RESULT_RESULT, PART, HAS_PART, entity));
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} else {
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if (reltype.equalsIgnoreCase(HAS_PART)) {
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res
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.add(
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getRelation(
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otherId, docId, RESULT_RESULT, PART, IS_PART_OF, entity));
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res
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.add(
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getRelation(
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docId, otherId, RESULT_RESULT, PART, HAS_PART, entity));
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}
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// else TODO catch more semantics
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}
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}
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}
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}
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*/
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for (final Object o : doc
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.selectNodes("//*[local-name()='relatedIdentifier' and ./@relatedIdentifierType='OPENAIRE']")) {
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final String originalId = ((Node) o).getText();
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if (StringUtils.isNotBlank(originalId)) {
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final String otherId = createOpenaireId(50, originalId, false);
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final String type = ((Node) o).valueOf("@relationType");
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if (type.equalsIgnoreCase(IS_SUPPLEMENT_TO)) {
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res
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.add(
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getRelation(
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docId, otherId, RESULT_RESULT, SUPPLEMENT, IS_SUPPLEMENT_TO, entity));
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res
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.add(
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getRelation(
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otherId, docId, RESULT_RESULT, SUPPLEMENT, IS_SUPPLEMENTED_BY, entity));
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} else if (type.equalsIgnoreCase(IS_PART_OF)) {
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res
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.add(
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getRelation(
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docId, otherId, RESULT_RESULT, PART, IS_PART_OF, entity));
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res
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.add(
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getRelation(
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otherId, docId, RESULT_RESULT, PART, HAS_PART, entity));
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} else {
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// TODO catch more semantics
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}
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}
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}
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return res;
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}
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protected String guessRelatedIdentifier(final String idType, final String value) {
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if (StringUtils.isBlank(idType) || StringUtils.isBlank(value))
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return null;
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if (idType.equalsIgnoreCase("OPENAIRE")) {
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return createOpenaireId(50, value, false);
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} else
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return null;
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}
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@Override
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protected Qualifier prepareResourceType(final Document doc, final DataInfo info) {
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return prepareQualifier(
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@ -933,6 +933,7 @@ class MappersTest {
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System.out.println("***************");
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System.out.println(new ObjectMapper().writeValueAsString(list));
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System.out.println("***************");
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assertEquals(3, list.size());
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final OtherResearchProduct p = (OtherResearchProduct) list.get(0);
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assertValidId(p.getId());
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assertValidId(p.getCollectedfrom().get(0).getKey());
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@ -30,6 +30,9 @@
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<datacite:relatedIdentifier relatedIdentifierType="w3id" relationType="HasPart">
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https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca/resources/6d3427a8-352e-49f4-9796-f618c44dc16d
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</datacite:relatedIdentifier>
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<datacite:relatedIdentifier relatedIdentifierType="OPENAIRE" relationType="isSupplementedBy">
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fsh_____4119::afc7592914ae190a50570db90f55f9c3
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</datacite:relatedIdentifier>
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</datacite:relatedIdentifiers>
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<datacite:resourceType xs:anyURI="http://purl.org/coar/resource_type/c_1843">RO-crate</datacite:resourceType>
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<datacite:rightsList>
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