removed unuseful tests
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parent
9b20a21b24
commit
a66aa9bd83
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@ -2,9 +2,12 @@
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package eu.dnetlib.dhp.oa.graph.dump;
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import java.io.*;
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import java.io.File;
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import java.nio.charset.StandardCharsets;
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import java.nio.file.Files;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.List;
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import org.apache.commons.io.IOUtils;
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import org.apache.hadoop.conf.Configuration;
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@ -17,16 +20,15 @@ import org.junit.jupiter.api.Test;
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import com.google.gson.Gson;
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import eu.dnetlib.dhp.oa.graph.dump.zenodo.Creator;
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import eu.dnetlib.dhp.oa.graph.dump.zenodo.Metadata;
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import eu.dnetlib.dhp.oa.graph.dump.zenodo.ZenodoModel;
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import eu.dnetlib.dhp.oa.graph.dump.zenodo.*;
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import eu.dnetlib.dhp.schema.dump.oaf.*;
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public class ZenodoUploadTest {
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private static String workingDir;
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private final String URL_STRING = "https://sandbox.zenodo.org/api/deposit/depositions";
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private final String ACCESS_TOKEN = "5ImUj0VC1ICg4ifK5dc3AGzJhcfAB4osxrFlsr8WxHXxjaYgCE0hY8HZcDoe";
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private final String ACCESS_TOKEN = "";
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@BeforeAll
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public static void beforeAll() throws IOException {
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@ -34,19 +36,7 @@ public class ZenodoUploadTest {
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.createTempDirectory(eu.dnetlib.dhp.oa.graph.dump.UpdateProjectInfoTest.class.getSimpleName())
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.toString();
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}
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//
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// Configuration conf = new Configuration();
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// conf.set("fs.defaultFS", "localhost");
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//
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// fileSystem = FileSystem.get(conf);
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//
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// FSDataOutputStream fsDataOutputStream = fileSystem.create(new org.apache.hadoop.fs.Path(workingDir + "/ni"));
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//
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// BufferedWriter writer = new BufferedWriter(new OutputStreamWriter(fsDataOutputStream, StandardCharsets.UTF_8));
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//
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//
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// writer.write(ZenodoUploadTest.class.getResourceAsStream("/eu/dnetlib/dhp/oa/graph/dump/zenodo/ni").toString());
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// }
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@Test
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public void HDFSConnection() throws IOException {
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@ -68,16 +58,6 @@ public class ZenodoUploadTest {
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.getPath()),
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new Path(workingDir + "/zenodo/dh-ch/dh-ch"));
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System.out.println("pr");
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// Configuration conf = new Configuration();
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// conf.set("fs.defaultFS", "localhost");
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//
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// APIClient s = new APIClient(
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// "https://sandbox.zenodo.org/api/deposit/depositions");
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//
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// s.connect();
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// s.upload(workingDir +"/ni", "Neuroinformatics", fs);
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APIClient client = new APIClient(URL_STRING,
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ACCESS_TOKEN);
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@ -89,9 +69,7 @@ public class ZenodoUploadTest {
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new Path(workingDir + "/zenodo"), true);
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while (fileStatusListIterator.hasNext()) {
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LocatedFileStatus fileStatus = fileStatusListIterator.next();
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// do stuff with the file like ...
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// BufferedInputStream bis = new BufferedInputStream(fs.open( fileStatus.getPath()));
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String p_string = fileStatus.getPath().toString();
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int index = p_string.lastIndexOf("/");
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@ -100,7 +78,6 @@ public class ZenodoUploadTest {
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String community_name = communityMap.get(community).replace(" ", "_");
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fs.copyToLocalFile(fileStatus.getPath(), new Path("/tmp/" + community_name));
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System.out.println(community);
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// System.out.println(client.upload(bis, community));
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File f = new File("/tmp/" + community_name);
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System.out.println(client.upload(f, community_name));
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@ -111,98 +88,14 @@ public class ZenodoUploadTest {
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}
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ZenodoModel zenodo = new ZenodoModel();
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Metadata data = new Metadata();
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data.setTitle("Dump of OpenAIRE Communities related graph");
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data.setUpload_type("dataset");
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data.setDescription("this is a fake upload done for testing purposes");
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Creator c = new Creator();
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c.setName("Miriam Baglioni");
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c.setAffiliation("CNR _ISTI");
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data.setCreators(Arrays.asList(c));
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zenodo.setMetadata(data);
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String metadata = "{\"metadata\":{\"access_right\":\"open\",\"communities\":[{\"identifier\":\"openaire-research-graph\"}],\"creators\":[{\"affiliation\":\"CNR - ISTI\",\"name\":\"Manghi, Paolo\",\"orcid\":\"0000-0001-7291-3210\"},{\"affiliation\":\"CNR - ISTI\",\"name\":\"Atzori, Claudio\",\"orcid\":\"0000-0001-9613-6639\"},{\"affiliation\":\"CNR - ISTI\",\"name\":\"Bardi, Alessia\",\"orcid\":\"0000-0002-1112-1292\"},{\"affiliation\":\"ISTI - CNR\",\"name\":\"Baglioni, Miriam\",\"orcid\":\"0000-0002-2273-9004\"},{\"affiliation\":\"University of Bielefeld\",\"name\":\"Shirrwagen, Jochen\"},{\"affiliation\":\"Athena Research and Innovation Centre\",\"name\":\"Dimitropoulos, Harry\"},{\"affiliation\":\"CNR - ISTI\",\"name\":\"La Bruzzo, Sandro\",\"orcid\":\"0000-0003-2855-1245\"},{\"affiliation\":\"Athena Research and Innovation Centre\",\"name\":\"Foufoulas, Ioannis\"},{\"affiliation\":\"University of Bielefeld\",\"name\":\"Löhden, Aenne\"},{\"affiliation\":\"University of Bielefeld\",\"name\":\"Bäcker, Amelie\",\"orcid\":\"0000-0001-6015-2063\"},{\"affiliation\":\"CNR - ISTI\",\"name\":\"Mannocci, Andrea\",\"orcid\":\"0000-0002-5193-7851\"},{\"affiliation\":\"University of Warsaw\",\"name\":\"Horst, Marek\"},{\"affiliation\":\"University of Bielefeld\",\"name\":\"Czerniak, Andreas\",\"orcid\":\"0000-0003-3883-4169\"},{\"affiliation\":\"Athena Research and Innovation Centre\",\"name\":\"Kiatropoulou, Katerina\"},{\"affiliation\":\"Athena Research and Innovation Centre\",\"name\":\"Kokogiannaki, Argiro\",\"orcid\":\"0000-0002-3880-0244\"},{\"affiliation\":\"CNR - ISTI\",\"name\":\"De Bonis, Michele\"},{\"affiliation\":\"CNR - ISTI\",\"name\":\"Artini, Michele\"},{\"affiliation\":\"CNR - ISTI\",\"name\":\"Ottonello, Enrico\"},{\"affiliation\":\"Athena Research and Innovation Centre\",\"name\":\"Lempesis, Antonis\"},{\"affiliation\":\"CERN\",\"name\":\"Ioannidis, Alexandros\"},{\"affiliation\":\"University of Bielefeld\",\"name\":\"Summan, Friedrich\"}],\"description\":\"\\u003cp\\u003eThis dataset contains dumps of the OpenAIRE Research Graph containing metadata records relevant for the research communities and initiatives collaborating with OpenAIRE\\u003c/p\\u003e. \\u003cp\\u003eEach dataset is a zip containing a file with one json per line. Each json is compliant to the schema available at XXXX\\u003c/p\\u003e\",\"grants\":[{\"id\":\"777541\"},{\"id\":\"824091\"},{\"id\":\"824323\"}],\"keywords\":[\"Open Science\",\"Scholarly Communication\",\"Information Science\"],\"language\":\"eng\",\"license\":\"CC-BY-4.0\",\"title\":\"OpenAIRE Research Graph: Dumps for research communities and initiatives.\",\"upload_type\":\"dataset\",\"version\":\"1.0\"}}";
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System.out.println(client.sendMretadata(new Gson().toJson(zenodo)));
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System.out.println(client.sendMretadata(metadata));
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System.out.println(client.publish());
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}
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@Test
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public void serializeMetadata() {
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ZenodoModel zenodo = new ZenodoModel();
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Metadata data = new Metadata();
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data.setTitle("Dump of OpenAIRE Communities related graph");
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data.setUpload_type("dataset");
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data.setDescription("this is a fake uploade done for testing purposes");
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Creator c = new Creator();
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c.setName("Miriam Baglioni");
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c.setAffiliation("CNR _ISTI");
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data.setCreators(Arrays.asList(c));
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zenodo.setMetadata(data);
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System.out.println(new Gson().toJson(zenodo));
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}
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@Test
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public void testConnection() throws IOException {
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// InputStream is = getClass().getClassLoader().getResourceAsStream("eu/dnetlib/dhp/oa/graph/dump/zenodo/ni");
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APIClient s = new APIClient(
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"https://sandbox.zenodo.org/api/deposit/depositions",
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"5ImUj0VC1ICg4ifK5dc3AGzJhcfAB4osxrFlsr8WxHXxjaYgCE0hY8HZcDoe");
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Assertions.assertEquals(201, s.connect());
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s
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.upload(
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new File(getClass()
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.getResource("/eu/dnetlib/dhp/oa/graph/dump/zenodo/ni")
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.getPath()),
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"Neuroinformatics");
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// s.upload(getClass()
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// .getResource("/eu/dnetlib/dhp/oa/graph/dump/zenodo/dh-ch")
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// .getPath(), "DigitalHumanitiesandCulturalHeritage");
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//
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// s.upload(getClass()
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// .getResource("/eu/dnetlib/dhp/oa/graph/dump/zenodo/egi")
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// .getPath(), "EGI");
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//
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// s.upload(getClass()
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// .getResource("/eu/dnetlib/dhp/oa/graph/dump/zenodo/science-innovation-policy")
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// .getPath(), "ScienceandInnovationPolicyStudies");
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// ZenodoModel zenodo = new ZenodoModel();
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// Metadata data = new Metadata();
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//
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// data.setTitle("Dump of OpenAIRE Communities related graph");
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// data.setUpload_type("dataset");
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// data.setDescription("this is a fake uploade done for testing purposes");
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// Creator c = new Creator();
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// c.setName("Miriam Baglioni");
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// c.setAffiliation("CNR _ISTI");
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// data.setCreators(Arrays.asList(c));
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// zenodo.setMetadata(data);
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//
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// s.sendMretadata(new Gson().toJson(zenodo));
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//
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// s.publish();
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}
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@Test
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public void testConnectionOnly() throws IOException {
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APIClient s = new APIClient(
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"https://sandbox.zenodo.org/api/deposit/depositions",
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"5ImUj0VC1ICg4ifK5dc3AGzJhcfAB4osxrFlsr8WxHXxjaYgCE0hY8HZcDoe");
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int tmp = s.connect();
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System.out.println(tmp);
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}
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}
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