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modification to allow dump of a single community

This commit is contained in:
Miriam Baglioni 2021-07-13 18:08:10 +02:00
parent eae10c5894
commit 970b387b8d
2 changed files with 26 additions and 9 deletions
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21
dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/dump/SaveCommunityMap.java
View File

@ -1,4 +1,3 @@
package eu.dnetlib.dhp.oa.graph.dump; package eu.dnetlib.dhp.oa.graph.dump;
import java.io.BufferedWriter; import java.io.BufferedWriter;
@ -6,6 +5,7 @@ import java.io.IOException;
import java.io.OutputStreamWriter; import java.io.OutputStreamWriter;
import java.io.Serializable; import java.io.Serializable;
import java.nio.charset.StandardCharsets; import java.nio.charset.StandardCharsets;
import java.util.Optional;
import org.apache.commons.io.IOUtils; import org.apache.commons.io.IOUtils;
import org.apache.hadoop.conf.Configuration; import org.apache.hadoop.conf.Configuration;
@ -54,10 +54,10 @@ public class SaveCommunityMap implements Serializable {
public static void main(String[] args) throws Exception { public static void main(String[] args) throws Exception {
String jsonConfiguration = IOUtils String jsonConfiguration = IOUtils
.toString( .toString(
SaveCommunityMap.class SaveCommunityMap.class
.getResourceAsStream( .getResourceAsStream(
"/eu/dnetlib/dhp/oa/graph/dump/input_cm_parameters.json")); "/eu/dnetlib/dhp/oa/graph/dump/input_cm_parameters.json"));
final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration); final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
parser.parseArgument(args); parser.parseArgument(args);
@ -71,14 +71,19 @@ public class SaveCommunityMap implements Serializable {
final String isLookUpUrl = parser.get("isLookUpUrl"); final String isLookUpUrl = parser.get("isLookUpUrl");
log.info("isLookUpUrl: {}", isLookUpUrl); log.info("isLookUpUrl: {}", isLookUpUrl);
final Boolean singleCommunity = Optional.ofNullable(parser.get("singleDeposition"))
.map(Boolean::valueOf).orElse(false);
final String community_id = Optional.ofNullable(parser.get("communityId")).orElse(null);
final SaveCommunityMap scm = new SaveCommunityMap(outputPath, nameNode, isLookUpUrl); final SaveCommunityMap scm = new SaveCommunityMap(outputPath, nameNode, isLookUpUrl);
scm.saveCommunityMap(); scm.saveCommunityMap(singleCommunity, community_id);
} }
private void saveCommunityMap() throws ISLookUpException, IOException, DocumentException { private void saveCommunityMap(boolean singleCommunity, String community_id) throws ISLookUpException, IOException, DocumentException {
writer.write(Utils.OBJECT_MAPPER.writeValueAsString(queryInformationSystem.getCommunityMap())); writer.write(Utils.OBJECT_MAPPER.writeValueAsString(queryInformationSystem.getCommunityMap(singleCommunity, community_id)));
writer.close(); writer.close();
} }
} }

14
dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/dump/input_cm_parameters.json
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@ -18,7 +18,19 @@
"paramLongName": "outputPath", "paramLongName": "outputPath",
"paramDescription": "the path used to store temporary output files", "paramDescription": "the path used to store temporary output files",
"paramRequired": true "paramRequired": true
} },
{
"paramName": "sd",
"paramLongName": "singleDeposition",
"paramDescription": "true if the dump should be created for a single community",
"paramRequired": true
},
{
"paramName": "ci",
"paramLongName": "communityId",
"paramDescription": "the id of the community for which to create the dump",
"paramRequired": true
} }
] ]