changed to map also the result associated to the whole graph
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parent
082225ad61
commit
7b0569d989
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@ -7,6 +7,7 @@ import java.util.stream.Collectors;
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import eu.dnetlib.dhp.schema.common.ModelConstants;
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import eu.dnetlib.dhp.schema.dump.oaf.*;
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import eu.dnetlib.dhp.schema.dump.oaf.community.CommunityResult;
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import eu.dnetlib.dhp.schema.oaf.DataInfo;
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import eu.dnetlib.dhp.schema.oaf.Field;
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import eu.dnetlib.dhp.schema.oaf.Journal;
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@ -15,10 +16,16 @@ import eu.dnetlib.dhp.schema.oaf.StructuredProperty;
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public class ResultMapper implements Serializable {
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public static <I extends eu.dnetlib.dhp.schema.oaf.OafEntity> Result map(
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I in, Map<String, String> communityMap) {
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I in, Map<String, String> communityMap, boolean graph) {
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final Result out = new Result();
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eu.dnetlib.dhp.schema.oaf.Result input = (eu.dnetlib.dhp.schema.oaf.Result)in;
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Result out;
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if (graph) {
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out = new Result();
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} else {
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out = new CommunityResult();
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}
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eu.dnetlib.dhp.schema.oaf.Result input = (eu.dnetlib.dhp.schema.oaf.Result) in;
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Optional<eu.dnetlib.dhp.schema.oaf.Qualifier> ort = Optional.ofNullable(input.getResulttype());
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if (ort.isPresent()) {
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switch (ort.get().getClassid()) {
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@ -134,7 +141,7 @@ public class ResultMapper implements Serializable {
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Optional<eu.dnetlib.dhp.schema.oaf.Qualifier> oar = Optional.ofNullable(input.getBestaccessright());
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if (oar.isPresent()) {
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if (Constants.accessRightsCoarMap.containsKey(oar.get().getClassid())) {
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String code = Constants.accessRightsCoarMap.get(oar.get().getClassname());
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String code = Constants.accessRightsCoarMap.get(oar.get().getClassid());
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out
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.setBestaccessright(
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AccessRight
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@ -145,57 +152,6 @@ public class ResultMapper implements Serializable {
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}
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}
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out
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.setCollectedfrom(
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input
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.getCollectedfrom()
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.stream()
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.map(cf -> KeyValue.newInstance(cf.getKey(), cf.getValue()))
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.collect(Collectors.toList()));
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Set<String> communities = communityMap.keySet();
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List<Context> contextList = Optional.ofNullable(input
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.getContext())
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.map(value -> value.stream()
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.map(c -> {
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String community_id = c.getId();
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if (community_id.indexOf("::") > 0) {
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community_id = community_id.substring(0, community_id.indexOf("::"));
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}
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if (communities.contains(community_id)) {
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Context context = new Context();
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context.setCode(community_id);
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context.setLabel(communityMap.get(community_id));
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Optional<List<DataInfo>> dataInfo = Optional.ofNullable(c.getDataInfo());
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if (dataInfo.isPresent()) {
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List<Provenance> provenance = new ArrayList<>();
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provenance
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.addAll(
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dataInfo
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.get()
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.stream()
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.map(di -> {
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if (di.getInferred()) {
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return Provenance.newInstance(di.getProvenanceaction().getClassname(), di.getTrust());
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}
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return null;
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})
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.filter(Objects::nonNull)
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.collect(Collectors.toSet()));
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context.setProvenance(provenance);
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}
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return context;
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}
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return null;
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})
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.filter(Objects::nonNull)
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.collect(Collectors.toList()))
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.orElse(new ArrayList<>());
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if (contextList.size() > 0) {
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out.setContext(contextList);
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}
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final List<String> contributorList = new ArrayList<>();
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Optional
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.ofNullable(input.getContributor())
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@ -218,9 +174,12 @@ public class ResultMapper implements Serializable {
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.ifPresent(
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provenance -> country
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.setProvenance(
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Provenance.newInstance(provenance
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.getProvenanceaction()
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.getClassname(), c.getDataInfo().getTrust())));
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Provenance
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.newInstance(
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provenance
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.getProvenanceaction()
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.getClassname(),
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c.getDataInfo().getTrust())));
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countryList
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.add(country);
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}));
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@ -238,7 +197,7 @@ public class ResultMapper implements Serializable {
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final List<String> descriptionList = new ArrayList<>();
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Optional
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.ofNullable(input.getDescription())
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.ifPresent(value -> value.stream().forEach(d -> descriptionList.add(d.getValue())));
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.ifPresent(value -> value.forEach(d -> descriptionList.add(d.getValue())));
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out.setDescription(descriptionList);
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Optional<Field<String>> oStr = Optional.ofNullable(input.getEmbargoenddate());
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if (oStr.isPresent()) {
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@ -361,29 +320,100 @@ public class ResultMapper implements Serializable {
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.ifPresent(value -> value.stream().forEach(s -> sourceList.add(s.getValue())));
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// out.setSource(input.getSource().stream().map(s -> s.getValue()).collect(Collectors.toList()));
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List<Subject> subjectList = new ArrayList<>();
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Optional.ofNullable(input.getSubject())
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.ifPresent(value -> value
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.forEach(s->subjectList.add(getSubject(s))));
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Optional
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.ofNullable(input.getSubject())
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.ifPresent(
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value -> value
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.forEach(s -> subjectList.add(getSubject(s))));
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List<ExternalReference> erList = new ArrayList<>();
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Optional.ofNullable(input.getExtraInfo())
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.ifPresent(value -> value.forEach(
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er -> erList.add(ExternalReference.newInstance(er))
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));
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Optional
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.ofNullable(input.getExtraInfo())
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.ifPresent(
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value -> value
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.forEach(
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er -> erList.add(ExternalReference.newInstance(er))));
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out.setSubjects(subjectList);
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out.setType(input.getResulttype().getClassid());
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}
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if (!graph) {
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((CommunityResult) out)
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.setCollectedfrom(
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input
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.getCollectedfrom()
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.stream()
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.map(cf -> KeyValue.newInstance(cf.getKey(), cf.getValue()))
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.collect(Collectors.toList()));
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Set<String> communities = communityMap.keySet();
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List<Context> contextList = Optional
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.ofNullable(
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input
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.getContext())
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.map(
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value -> value
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.stream()
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.map(c -> {
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String community_id = c.getId();
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if (community_id.indexOf("::") > 0) {
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community_id = community_id.substring(0, community_id.indexOf("::"));
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}
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if (communities.contains(community_id)) {
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Context context = new Context();
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context.setCode(community_id);
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context.setLabel(communityMap.get(community_id));
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Optional<List<DataInfo>> dataInfo = Optional.ofNullable(c.getDataInfo());
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if (dataInfo.isPresent()) {
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List<Provenance> provenance = new ArrayList<>();
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provenance
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.addAll(
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dataInfo
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.get()
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.stream()
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.map(
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di -> Optional
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.ofNullable(di.getProvenanceaction())
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.map(
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provenanceaction -> Provenance
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.newInstance(
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provenanceaction.getClassname(), di.getTrust()))
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.orElse(null))
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.filter(Objects::nonNull)
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.collect(Collectors.toSet()));
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context.setProvenance(provenance);
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}
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return context;
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}
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return null;
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})
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.filter(Objects::nonNull)
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.collect(Collectors.toList()))
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.orElse(new ArrayList<>());
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if (contextList.size() > 0) {
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Set<Integer> hashValue = new HashSet<>();
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List<Context> remainigContext = new ArrayList<>();
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contextList.forEach(c ->{
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if(!hashValue.contains(c.hashCode())){
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remainigContext.add(c);
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hashValue.add(c.hashCode());
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}
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});
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((CommunityResult) out).setContext(remainigContext);
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}
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}
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return out;
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}
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private static Subject getSubject(StructuredProperty s){
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private static Subject getSubject(StructuredProperty s) {
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Subject subject = new Subject();
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subject.setSubject(ControlledField.newInstance(s.getQualifier().getClassid(), s.getValue()));
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Optional<DataInfo> di = Optional.ofNullable(s.getDataInfo());
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if (di.isPresent()){
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if (di.isPresent()) {
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Provenance p = new Provenance();
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p.setProvenance(di.get().getProvenanceaction().getClassname());
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p.setTrust(di.get().getTrust());
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@ -392,6 +422,7 @@ public class ResultMapper implements Serializable {
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return subject;
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}
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private static Author getAuthor(eu.dnetlib.dhp.schema.oaf.Author oa) {
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Author a = new Author();
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Optional
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@ -419,12 +450,12 @@ public class ResultMapper implements Serializable {
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return a;
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}
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private static Pid getPid(StructuredProperty p){
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private static Pid getPid(StructuredProperty p) {
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Pid pid = new Pid();
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pid.setPid(ControlledField.newInstance(p.getQualifier().getClassid(), p.getValue()));
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Optional<DataInfo> di = Optional.of(p.getDataInfo());
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Optional<DataInfo> di = Optional.ofNullable(p.getDataInfo());
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Provenance provenance = new Provenance();
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if (di.isPresent()){
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if (di.isPresent()) {
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provenance.setProvenance(di.get().getProvenanceaction().getClassname());
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provenance.setTrust(di.get().getTrust());
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pid.setProvenance(provenance);
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