[EOSC context TAG] Add test class and resourcesK
This commit is contained in:
parent
317a4a56ef
commit
7a1c1b6f53
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@ -1,3 +1,4 @@
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package eu.dnetlib.dhp.bulktag.eosc;
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import java.io.Serializable;
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@ -7,22 +8,22 @@ import java.io.Serializable;
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* @Date 21/07/22
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*/
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public class DatasourceMaster implements Serializable {
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private String datasource;
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private String master;
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private String datasource;
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private String master;
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public String getDatasource() {
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return datasource;
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}
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public String getDatasource() {
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return datasource;
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}
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public void setDatasource(String datasource) {
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this.datasource = datasource;
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}
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public void setDatasource(String datasource) {
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this.datasource = datasource;
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}
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public String getMaster() {
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return master;
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}
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public String getMaster() {
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return master;
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}
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public void setMaster(String master) {
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this.master = master;
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}
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public void setMaster(String master) {
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this.master = master;
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}
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}
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@ -1,27 +1,6 @@
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package eu.dnetlib.dhp.bulktag.eosc;
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/**
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* @author miriam.baglioni
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* @Date 21/07/22
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*/
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import com.fasterxml.jackson.databind.ObjectMapper;
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import eu.dnetlib.dhp.application.ArgumentApplicationParser;
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import eu.dnetlib.dhp.common.DbClient;
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import eu.dnetlib.dhp.schema.common.ModelSupport;
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import eu.dnetlib.dhp.schema.common.RelationInverse;
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import eu.dnetlib.dhp.schema.oaf.Relation;
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import eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils;
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import org.apache.commons.io.IOUtils;
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import org.apache.commons.lang3.StringUtils;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.fs.FSDataOutputStream;
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import org.apache.hadoop.fs.FileSystem;
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import org.apache.hadoop.fs.Path;
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import java.io.BufferedWriter;
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import java.io.Closeable;
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import java.io.IOException;
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@ -34,6 +13,28 @@ import java.util.List;
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import java.util.function.Consumer;
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import java.util.function.Function;
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import org.apache.commons.io.IOUtils;
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import org.apache.commons.lang3.StringUtils;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.fs.FSDataOutputStream;
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import org.apache.hadoop.fs.FileSystem;
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import org.apache.hadoop.fs.Path;
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/**
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* @author miriam.baglioni
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* @Date 21/07/22
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*/
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import com.fasterxml.jackson.databind.ObjectMapper;
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import eu.dnetlib.dhp.application.ArgumentApplicationParser;
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import eu.dnetlib.dhp.common.DbClient;
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import eu.dnetlib.dhp.schema.common.ModelSupport;
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import eu.dnetlib.dhp.schema.common.RelationInverse;
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import eu.dnetlib.dhp.schema.oaf.Relation;
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import eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils;
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public class ReadMasterDatasourceFromDB implements Closeable {
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private final DbClient dbClient;
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@ -43,18 +44,18 @@ public class ReadMasterDatasourceFromDB implements Closeable {
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private final ObjectMapper OBJECT_MAPPER = new ObjectMapper();
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private static final String QUERY = "SELECT dso.id datasource, d.id master FROM " +
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"(SELECT id FROM dsm_services WHERE id like 'eosc%') dso " +
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"FULL JOIN " +
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"(SELECT id, duplicate FROM dsm_dedup_services WHERE duplicate like 'eosc%')d " +
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"ON dso.id = d.duplicate";
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"(SELECT id FROM dsm_services WHERE id like 'eosc%') dso " +
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"FULL JOIN " +
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"(SELECT id, duplicate FROM dsm_dedup_services WHERE duplicate like 'eosc%')d " +
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"ON dso.id = d.duplicate";
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public static void main(final String[] args) throws Exception {
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(
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IOUtils
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.toString(
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ReadMasterDatasourceFromDB.class
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ReadMasterDatasourceFromDB.class
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.getResourceAsStream(
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"/eu/dnetlib/dhp/blacklist/blacklist_parameters.json")));
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"/eu/dnetlib/dhp/bulktag/datasourcemaster_parameters.json")));
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parser.parseArgument(args);
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@ -64,8 +65,9 @@ public class ReadMasterDatasourceFromDB implements Closeable {
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final String hdfsPath = parser.get("hdfsPath") + "/datasourceMasters";
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final String hdfsNameNode = parser.get("hdfsNameNode");
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try (final ReadMasterDatasourceFromDB rmd = new ReadMasterDatasourceFromDB(hdfsPath, hdfsNameNode, dbUrl, dbUser,
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dbPassword)) {
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try (
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final ReadMasterDatasourceFromDB rmd = new ReadMasterDatasourceFromDB(hdfsPath, hdfsNameNode, dbUrl, dbUser,
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dbPassword)) {
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log.info("Processing datasources...");
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rmd.execute(QUERY, rmd::datasourceMasterMap);
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@ -75,7 +77,7 @@ public class ReadMasterDatasourceFromDB implements Closeable {
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public void execute(final String sql, final Function<ResultSet, DatasourceMaster> producer) {
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dbClient.processResults(sql, rs -> writeMap(producer.apply(rs)));
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dbClient.processResults(sql, rs -> writeMap(producer.apply(rs)));
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}
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public DatasourceMaster datasourceMasterMap(ResultSet rs) {
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@ -1,18 +1,22 @@
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package eu.dnetlib.dhp.bulktag.eosc;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import com.google.gson.Gson;
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import eu.dnetlib.dhp.application.ArgumentApplicationParser;
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import eu.dnetlib.dhp.bulktag.SparkBulkTagJob;
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import eu.dnetlib.dhp.bulktag.community.*;
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import eu.dnetlib.dhp.schema.common.ModelSupport;
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import eu.dnetlib.dhp.schema.oaf.Context;
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import eu.dnetlib.dhp.schema.oaf.DataInfo;
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import eu.dnetlib.dhp.schema.oaf.Qualifier;
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import eu.dnetlib.dhp.schema.oaf.Result;
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import eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils;
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import static eu.dnetlib.dhp.PropagationConstant.readPath;
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import static eu.dnetlib.dhp.PropagationConstant.removeOutputDir;
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import static eu.dnetlib.dhp.bulktag.community.TaggingConstants.*;
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import static eu.dnetlib.dhp.bulktag.community.TaggingConstants.TAGGING_TRUST;
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import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkSession;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.DNET_PROVENANCE_ACTIONS;
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import java.io.Serializable;
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import java.util.*;
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import java.util.stream.Collectors;
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import javax.print.attribute.DocAttributeSet;
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import org.apache.commons.io.IOUtils;
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import org.apache.spark.SparkConf;
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import org.apache.spark.api.java.function.ForeachFunction;
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import org.apache.spark.api.java.function.MapFunction;
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import org.apache.spark.sql.Dataset;
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import org.apache.spark.sql.Encoders;
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@ -21,16 +25,15 @@ import org.apache.spark.sql.SparkSession;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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import javax.print.attribute.DocAttributeSet;
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import java.io.Serializable;
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import java.util.*;
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import java.util.stream.Collectors;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import com.google.gson.Gson;
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import static eu.dnetlib.dhp.PropagationConstant.removeOutputDir;
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import static eu.dnetlib.dhp.bulktag.community.TaggingConstants.*;
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import static eu.dnetlib.dhp.bulktag.community.TaggingConstants.TAGGING_TRUST;
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import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkSession;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.DNET_PROVENANCE_ACTIONS;
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import eu.dnetlib.dhp.application.ArgumentApplicationParser;
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import eu.dnetlib.dhp.bulktag.SparkBulkTagJob;
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import eu.dnetlib.dhp.bulktag.community.*;
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import eu.dnetlib.dhp.schema.common.ModelSupport;
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import eu.dnetlib.dhp.schema.oaf.*;
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import eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils;
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/**
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* @author miriam.baglioni
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@ -38,108 +41,124 @@ import static eu.dnetlib.dhp.schema.common.ModelConstants.DNET_PROVENANCE_ACTION
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*/
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public class SparkEoscBulkTag implements Serializable {
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private static final Logger log = LoggerFactory.getLogger(SparkEoscBulkTag.class);
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public static final ObjectMapper OBJECT_MAPPER = new ObjectMapper();
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private static final Logger log = LoggerFactory.getLogger(SparkEoscBulkTag.class);
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public static final ObjectMapper OBJECT_MAPPER = new ObjectMapper();
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public static void main(String[] args) throws Exception {
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String jsonConfiguration = IOUtils
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.toString(
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SparkEoscBulkTag.class
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.getResourceAsStream(
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"/eu/dnetlib/dhp/bulktag/input_bulkTag_parameters.json"));
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public static void main(String[] args) throws Exception {
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String jsonConfiguration = IOUtils
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.toString(
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SparkEoscBulkTag.class
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.getResourceAsStream(
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"/eu/dnetlib/dhp/bulktag/input_eosc_bulkTag_parameters.json"));
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
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parser.parseArgument(args);
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
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parser.parseArgument(args);
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Boolean isSparkSessionManaged = Optional
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.ofNullable(parser.get("isSparkSessionManaged"))
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.map(Boolean::valueOf)
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.orElse(Boolean.TRUE);
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log.info("isSparkSessionManaged: {}", isSparkSessionManaged);
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Boolean isSparkSessionManaged = Optional
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.ofNullable(parser.get("isSparkSessionManaged"))
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.map(Boolean::valueOf)
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.orElse(Boolean.TRUE);
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log.info("isSparkSessionManaged: {}", isSparkSessionManaged);
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final String inputPath = parser.get("sourcePath");
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log.info("inputPath: {}", inputPath);
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final String inputPath = parser.get("sourcePath");
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log.info("inputPath: {}", inputPath);
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final String outputPath = parser.get("outputPath");
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log.info("outputPath: {}", outputPath);
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final String workingPath = parser.get("workingPath");
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log.info("workingPath: {}", workingPath);
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String datasourceMapPath = parser.get("datasourceMapPath");
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log.info("datasourceMapPath: {}", datasourceMapPath);
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String datasourceMapPath = parser.get("datasourceMapPath");
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log.info("datasourceMapPath: {}", datasourceMapPath);
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final String resultClassName = parser.get("resultTableName");
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log.info("resultTableName: {}", resultClassName);
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final String resultClassName = parser.get("resultTableName");
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log.info("resultTableName: {}", resultClassName);
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Class<? extends Result> resultClazz = (Class<? extends Result>) Class.forName(resultClassName);
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Class<? extends Result> resultClazz = (Class<? extends Result>) Class.forName(resultClassName);
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SparkConf conf = new SparkConf();
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CommunityConfiguration cc;
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SparkConf conf = new SparkConf();
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CommunityConfiguration cc;
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runWithSparkSession(
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conf,
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isSparkSessionManaged,
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spark -> {
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removeOutputDir(spark, outputPath);
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execBulkTag(spark, inputPath, outputPath, datasourceMapPath, resultClazz);
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});
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}
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runWithSparkSession(
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conf,
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isSparkSessionManaged,
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spark -> {
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removeOutputDir(spark, workingPath);
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execBulkTag(spark, inputPath, workingPath, datasourceMapPath, resultClazz);
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});
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}
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private static <R extends Result> void execBulkTag(
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SparkSession spark,
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String inputPath,
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String outputPath,
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String datasourceMapPath,
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Class<R> resultClazz) {
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private static <R extends Result> void execBulkTag(
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SparkSession spark,
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String inputPath,
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String workingPath,
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String datasourceMapPath,
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Class<R> resultClazz) {
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final List<String> hostedByList = Arrays.asList(readPath(spark, datasourceMapPath, DatasourceMaster.class)
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.map((MapFunction<DatasourceMaster, String>) dm -> dm.getMaster(), Encoders.STRING())
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.collect());
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readPath(spark, inputPath, resultClazz)
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.map(patchResult(), Encoders.bean(resultClazz))
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.filter(Objects::nonNull)
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.map(
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(MapFunction<R, R>) value -> enrich(value, hostedByList),
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Encoders.bean(resultClazz))
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.write()
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.mode(SaveMode.Overwrite)
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.option("compression", "gzip")
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.json(outputPath);
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}
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List<String> hostedByList = readPath(spark, datasourceMapPath, DatasourceMaster.class)
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.map((MapFunction<DatasourceMaster, String>) dm -> dm.getMaster(), Encoders.STRING())
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.collectAsList();
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private static <R extends Result> R enrich(R value, List<String> hostedByList) {
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if(value.getInstance().stream().anyMatch(i -> hostedByList.contains(i.getHostedby().getKey())) ||
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(value.getEoscifguidelines() != null && value.getEoscifguidelines().size() > 0)){
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Context context = new Context();
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context.setId("eosc");
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OafMapperUtils.dataInfo(false, BULKTAG_DATA_INFO_TYPE,true,false,
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OafMapperUtils.qualifier(CLASS_ID_DATASOURCE, CLASS_NAME_BULKTAG_DATASOURCE,
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DNET_PROVENANCE_ACTIONS, DNET_PROVENANCE_ACTIONS), TAGGING_TRUST);
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value.getContext().add(context);
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}
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return value;
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}
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public static <R> Dataset<R> readPath(
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SparkSession spark, String inputPath, Class<R> clazz) {
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return spark
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.read()
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.textFile(inputPath)
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.map((MapFunction<String, R>) value -> OBJECT_MAPPER.readValue(value, clazz), Encoders.bean(clazz));
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}
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readPath(spark, inputPath, resultClazz)
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.map(patchResult(), Encoders.bean(resultClazz))
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.filter(Objects::nonNull)
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.map(
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(MapFunction<R, R>) value -> enrich(value, hostedByList),
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Encoders.bean(resultClazz))
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.write()
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.mode(SaveMode.Overwrite)
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.option("compression", "gzip")
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.json(workingPath);
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// TODO remove this hack as soon as the values fixed by this method will be provided as NON null
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private static <R extends Result> MapFunction<R, R> patchResult() {
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return r -> {
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if (r.getDataInfo().getDeletedbyinference() == null) {
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r.getDataInfo().setDeletedbyinference(false);
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}
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if (r.getContext() == null) {
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r.setContext(new ArrayList<>());
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}
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return r;
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};
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}
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readPath(spark, workingPath, resultClazz)
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.write()
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.mode(SaveMode.Overwrite)
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.option("compression", "gzip")
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.json(inputPath);
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}
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private static <R extends Result> R enrich(R value, List<String> hostedByList) {
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if (value.getInstance().stream().anyMatch(i -> hostedByList.contains(i.getHostedby().getKey())) ||
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(value.getEoscifguidelines() != null && value.getEoscifguidelines().size() > 0)) {
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Context context = new Context();
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context.setId("eosc");
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OafMapperUtils
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.dataInfo(
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false, BULKTAG_DATA_INFO_TYPE, true, false,
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OafMapperUtils
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.qualifier(
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CLASS_ID_DATASOURCE, CLASS_NAME_BULKTAG_DATASOURCE,
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DNET_PROVENANCE_ACTIONS, DNET_PROVENANCE_ACTIONS),
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TAGGING_TRUST);
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value.getContext().add(context);
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}
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return value;
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}
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public static <R> Dataset<R> readPath(
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SparkSession spark, String inputPath, Class<R> clazz) {
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return spark
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.read()
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.textFile(inputPath)
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.map((MapFunction<String, R>) value -> OBJECT_MAPPER.readValue(value, clazz), Encoders.bean(clazz));
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}
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// TODO remove this hack as soon as the values fixed by this method will be provided as NON null
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private static <R extends Result> MapFunction<R, R> patchResult() {
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return r -> {
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if (r.getDataInfo().getDeletedbyinference() == null) {
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r.getDataInfo().setDeletedbyinference(false);
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}
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if (r.getContext() == null) {
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r.setContext(new ArrayList<>());
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}
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return r;
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};
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}
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}
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@ -0,0 +1,32 @@
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[
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{
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"paramName": "p",
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"paramLongName": "hdfsPath",
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"paramDescription": "the path where storing the sequential file",
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"paramRequired": true
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},
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{
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"paramName": "nn",
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"paramLongName": "hdfsNameNode",
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"paramDescription": "the name node on hdfs",
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"paramRequired": true
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},
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{
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"paramName": "pgurl",
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"paramLongName": "postgresUrl",
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"paramDescription": "postgres url, example: jdbc:postgresql://localhost:5432/testdb",
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"paramRequired": true
|
||||
},
|
||||
{
|
||||
"paramName": "pguser",
|
||||
"paramLongName": "postgresUser",
|
||||
"paramDescription": "postgres user",
|
||||
"paramRequired": false
|
||||
},
|
||||
{
|
||||
"paramName": "pgpasswd",
|
||||
"paramLongName": "postgresPassword",
|
||||
"paramDescription": "postgres password",
|
||||
"paramRequired": false
|
||||
}
|
||||
]
|
||||
|
|
@ -0,0 +1,34 @@
|
|||
[
|
||||
|
||||
{
|
||||
"paramName":"s",
|
||||
"paramLongName":"sourcePath",
|
||||
"paramDescription": "the path of the sequencial file to read",
|
||||
"paramRequired": true
|
||||
},
|
||||
{
|
||||
"paramName": "dmp",
|
||||
"paramLongName":"datasourceMapPath",
|
||||
"paramDescription": "the path where the association datasource master has been stored",
|
||||
"paramRequired": true
|
||||
},
|
||||
{
|
||||
"paramName":"tn",
|
||||
"paramLongName":"resultTableName",
|
||||
"paramDescription": "the name of the result table we are currently working on",
|
||||
"paramRequired": true
|
||||
},
|
||||
{
|
||||
"paramName": "wp",
|
||||
"paramLongName": "workingPath",
|
||||
"paramDescription": "the path used to store temporary output files",
|
||||
"paramRequired": true
|
||||
},
|
||||
{
|
||||
"paramName": "ssm",
|
||||
"paramLongName": "isSparkSessionManaged",
|
||||
"paramDescription": "true if the spark session is managed, false otherwise",
|
||||
"paramRequired": false
|
||||
}
|
||||
|
||||
]
|
||||
|
|
@ -16,6 +16,21 @@
|
|||
<name>outputPath</name>
|
||||
<description>the output path</description>
|
||||
</property>
|
||||
|
||||
|
||||
<property>
|
||||
<name>postgresURL</name>
|
||||
<description>the url of the postgress server to query</description>
|
||||
</property>
|
||||
<property>
|
||||
<name>postgresUser</name>
|
||||
<description>the username to access the postgres db</description>
|
||||
</property>
|
||||
<property>
|
||||
<name>postgresPassword</name>
|
||||
<description>the postgres password</description>
|
||||
</property>
|
||||
|
||||
</parameters>
|
||||
|
||||
<global>
|
||||
|
|
@ -29,7 +44,7 @@
|
|||
</configuration>
|
||||
</global>
|
||||
|
||||
<start to="reset_outputpath"/>
|
||||
<start to="eosc_context_tag"/>
|
||||
|
||||
<kill name="Kill">
|
||||
<message>Action failed, error message[${wf:errorMessage(wf:lastErrorNode())}]</message>
|
||||
|
|
@ -226,10 +241,132 @@
|
|||
<arg>--sourcePath</arg><arg>${outputPath}</arg>
|
||||
<arg>--workingPath</arg><arg>${workingDir}/eoscTag</arg>
|
||||
</spark>
|
||||
<ok to="eosc_get_datasource_master"/>
|
||||
<error to="Kill"/>
|
||||
</action>
|
||||
|
||||
<action name="eosc_get_datasource_master">
|
||||
<java>
|
||||
<main-class>eu.dnetlib.dhp.bulktag.eosc.ReadMasterDatasourceFromDB</main-class>
|
||||
<arg>--hdfsPath</arg><arg>${workingDir}/datasourcemaster</arg>
|
||||
<arg>--hdfsNameNode</arg><arg>${nameNode}</arg>
|
||||
<arg>--postgresUrl</arg><arg>${postgresURL}</arg>
|
||||
<arg>--postgresUser</arg><arg>${postgresUser}</arg>
|
||||
<arg>--postgresPassword</arg><arg>${postgresPassword}</arg>
|
||||
</java>
|
||||
<ok to="End"/>
|
||||
<error to="Kill"/>
|
||||
</action>
|
||||
|
||||
<fork name="fork_eosc_context_tag">
|
||||
<path start="eosc_context_tag_publication"/>
|
||||
<path start="eosc_context_tag_dataset"/>
|
||||
<path start="eosc_context_tag_otherresearchproduct"/>
|
||||
<path start="eosc_context_tag_software"/>
|
||||
</fork>
|
||||
|
||||
<action name="eosc_context_tag_publication">
|
||||
<spark xmlns="uri:oozie:spark-action:0.2">
|
||||
<master>yarn-cluster</master>
|
||||
<mode>cluster</mode>
|
||||
<name>EOSC_tagging</name>
|
||||
<class>eu.dnetlib.dhp.bulktag.eosc.SparkEoscBulkTag</class>
|
||||
<jar>dhp-enrichment-${projectVersion}.jar</jar>
|
||||
<spark-opts>
|
||||
--num-executors=${sparkExecutorNumber}
|
||||
--executor-memory=${sparkExecutorMemory}
|
||||
--executor-cores=${sparkExecutorCores}
|
||||
--driver-memory=${sparkDriverMemory}
|
||||
--conf spark.extraListeners=${spark2ExtraListeners}
|
||||
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
|
||||
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
|
||||
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
|
||||
</spark-opts>
|
||||
<arg>--sourcePath</arg><arg>${outputPath}/publication</arg>
|
||||
<arg>--workingPath</arg><arg>${workingDir}/eoscContextTag/publication</arg>
|
||||
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg>
|
||||
<arg>--datasourceMapPath</arg><arg>${workingDir}/datasourcemaster</arg>
|
||||
</spark>
|
||||
<ok to="wait_eosc_context_tag"/>
|
||||
<error to="Kill"/>
|
||||
</action>
|
||||
|
||||
<action name="eosc_context_tag_dataset">
|
||||
<spark xmlns="uri:oozie:spark-action:0.2">
|
||||
<master>yarn-cluster</master>
|
||||
<mode>cluster</mode>
|
||||
<name>EOSC_tagging</name>
|
||||
<class>eu.dnetlib.dhp.bulktag.eosc.SparkEoscBulkTag</class>
|
||||
<jar>dhp-enrichment-${projectVersion}.jar</jar>
|
||||
<spark-opts>
|
||||
--num-executors=${sparkExecutorNumber}
|
||||
--executor-memory=${sparkExecutorMemory}
|
||||
--executor-cores=${sparkExecutorCores}
|
||||
--driver-memory=${sparkDriverMemory}
|
||||
--conf spark.extraListeners=${spark2ExtraListeners}
|
||||
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
|
||||
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
|
||||
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
|
||||
</spark-opts>
|
||||
<arg>--sourcePath</arg><arg>${outputPath}/dataset</arg>
|
||||
<arg>--workingPath</arg><arg>${workingDir}/eoscContextTag/dataset</arg>
|
||||
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
|
||||
<arg>--datasourceMapPath</arg><arg>${workingDir}/datasourcemaster</arg>
|
||||
</spark>
|
||||
<ok to="wait_eosc_context_tag"/>
|
||||
<error to="Kill"/>
|
||||
</action>
|
||||
<action name="eosc_context_tag_software">
|
||||
<spark xmlns="uri:oozie:spark-action:0.2">
|
||||
<master>yarn-cluster</master>
|
||||
<mode>cluster</mode>
|
||||
<name>EOSC_tagging</name>
|
||||
<class>eu.dnetlib.dhp.bulktag.eosc.SparkEoscBulkTag</class>
|
||||
<jar>dhp-enrichment-${projectVersion}.jar</jar>
|
||||
<spark-opts>
|
||||
--num-executors=${sparkExecutorNumber}
|
||||
--executor-memory=${sparkExecutorMemory}
|
||||
--executor-cores=${sparkExecutorCores}
|
||||
--driver-memory=${sparkDriverMemory}
|
||||
--conf spark.extraListeners=${spark2ExtraListeners}
|
||||
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
|
||||
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
|
||||
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
|
||||
</spark-opts>
|
||||
<arg>--sourcePath</arg><arg>${outputPath}/software</arg>
|
||||
<arg>--workingPath</arg><arg>${workingDir}/eoscContextTag/software</arg>
|
||||
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
|
||||
<arg>--datasourceMapPath</arg><arg>${workingDir}/datasourcemaster</arg>
|
||||
</spark>
|
||||
<ok to="wait_eosc_context_tag"/>
|
||||
<error to="Kill"/>
|
||||
</action>
|
||||
<action name="eosc_context_tag_otherresearchproduct">
|
||||
<spark xmlns="uri:oozie:spark-action:0.2">
|
||||
<master>yarn-cluster</master>
|
||||
<mode>cluster</mode>
|
||||
<name>EOSC_tagging</name>
|
||||
<class>eu.dnetlib.dhp.bulktag.eosc.SparkEoscBulkTag</class>
|
||||
<jar>dhp-enrichment-${projectVersion}.jar</jar>
|
||||
<spark-opts>
|
||||
--num-executors=${sparkExecutorNumber}
|
||||
--executor-memory=${sparkExecutorMemory}
|
||||
--executor-cores=${sparkExecutorCores}
|
||||
--driver-memory=${sparkDriverMemory}
|
||||
--conf spark.extraListeners=${spark2ExtraListeners}
|
||||
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
|
||||
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
|
||||
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
|
||||
</spark-opts>
|
||||
<arg>--sourcePath</arg><arg>${outputPath}/otherresearchproduct</arg>
|
||||
<arg>--workingPath</arg><arg>${workingDir}/eoscContextTag/otherresearchproduct</arg>
|
||||
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
|
||||
<arg>--datasourceMapPath</arg><arg>${workingDir}/datasourcemaster</arg>
|
||||
</spark>
|
||||
<ok to="wait_eosc_context_tag"/>
|
||||
<error to="Kill"/>
|
||||
</action>
|
||||
<join name="wait_eosc_context_tag" to="End"/>
|
||||
<end name="End"/>
|
||||
|
||||
</workflow-app>
|
||||
|
|
@ -0,0 +1,152 @@
|
|||
|
||||
package eu.dnetlib.dhp.bulktag;
|
||||
/**
|
||||
* @author miriam.baglioni
|
||||
* @Date 22/07/22
|
||||
*/
|
||||
|
||||
import com.fasterxml.jackson.databind.ObjectMapper;
|
||||
import eu.dnetlib.dhp.bulktag.eosc.SparkEoscBulkTag;
|
||||
import eu.dnetlib.dhp.schema.oaf.Dataset;
|
||||
import eu.dnetlib.dhp.schema.oaf.OtherResearchProduct;
|
||||
import eu.dnetlib.dhp.schema.oaf.Software;
|
||||
import eu.dnetlib.dhp.schema.oaf.StructuredProperty;
|
||||
import org.apache.commons.io.FileUtils;
|
||||
import org.apache.spark.SparkConf;
|
||||
import org.apache.spark.api.java.JavaRDD;
|
||||
import org.apache.spark.api.java.JavaSparkContext;
|
||||
import org.apache.spark.api.java.function.MapFunction;
|
||||
import org.apache.spark.sql.Encoders;
|
||||
import org.apache.spark.sql.SaveMode;
|
||||
import org.apache.spark.sql.SparkSession;
|
||||
import org.junit.jupiter.api.AfterAll;
|
||||
import org.junit.jupiter.api.Assertions;
|
||||
import org.junit.jupiter.api.BeforeAll;
|
||||
import org.junit.jupiter.api.Test;
|
||||
import org.slf4j.Logger;
|
||||
import org.slf4j.LoggerFactory;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.nio.file.Files;
|
||||
import java.nio.file.Path;
|
||||
import java.util.List;
|
||||
|
||||
//"50|475c1990cbb2::0fecfb874d9395aa69d2f4d7cd1acbea" has instance hostedby eosc
|
||||
//"50|475c1990cbb2::3185cd5d8a2b0a06bb9b23ef11748eb1" has instance hostedby eosc
|
||||
//"50|475c1990cbb2::449f28eefccf9f70c04ad70d61e041c7" has two instance one hostedby eosc
|
||||
//"50|475c1990cbb2::3894c94123e96df8a21249957cf160cb" has EoscTag
|
||||
|
||||
public class EOSCContextTaggingTest {
|
||||
private static final ObjectMapper OBJECT_MAPPER = new ObjectMapper();
|
||||
|
||||
private static SparkSession spark;
|
||||
|
||||
private static Path workingDir;
|
||||
|
||||
private static final Logger log = LoggerFactory.getLogger(EOSCContextTaggingTest.class);
|
||||
|
||||
@BeforeAll
|
||||
public static void beforeAll() throws IOException {
|
||||
workingDir = Files.createTempDirectory(EOSCContextTaggingTest.class.getSimpleName());
|
||||
log.info("using work dir {}", workingDir);
|
||||
|
||||
SparkConf conf = new SparkConf();
|
||||
conf.setAppName(EOSCContextTaggingTest.class.getSimpleName());
|
||||
|
||||
conf.setMaster("local[*]");
|
||||
conf.set("spark.driver.host", "localhost");
|
||||
conf.set("hive.metastore.local", "true");
|
||||
conf.set("spark.ui.enabled", "false");
|
||||
conf.set("spark.sql.warehouse.dir", workingDir.toString());
|
||||
conf.set("hive.metastore.warehouse.dir", workingDir.resolve("warehouse").toString());
|
||||
|
||||
spark = SparkSession
|
||||
.builder()
|
||||
.appName(EOSCTagJobTest.class.getSimpleName())
|
||||
.config(conf)
|
||||
.getOrCreate();
|
||||
}
|
||||
|
||||
@AfterAll
|
||||
public static void afterAll() throws IOException {
|
||||
FileUtils.deleteDirectory(workingDir.toFile());
|
||||
spark.stop();
|
||||
}
|
||||
|
||||
@Test
|
||||
void EoscContextTagTest() throws Exception {
|
||||
|
||||
spark
|
||||
.read()
|
||||
.textFile(getClass().getResource("/eu/dnetlib/dhp/bulktag/eosc/dataset/dataset_10.json").getPath())
|
||||
.map(
|
||||
(MapFunction<String, Dataset>) value -> OBJECT_MAPPER.readValue(value, Dataset.class),
|
||||
Encoders.bean(Dataset.class))
|
||||
.write()
|
||||
.mode(SaveMode.Overwrite)
|
||||
.option("compression", "gzip")
|
||||
.json(workingDir.toString() + "/input/dataset");
|
||||
|
||||
|
||||
SparkEoscBulkTag
|
||||
.main(
|
||||
new String[] {
|
||||
"-isSparkSessionManaged", Boolean.FALSE.toString(),
|
||||
"-sourcePath",
|
||||
workingDir.toString() + "/input/dataset",
|
||||
"-workingPath", workingDir.toString() + "/working/dataset",
|
||||
"-datasourceMapPath", getClass().getResource("/eu/dnetlib/dhp/bulktag/eosc/datasourceMasterAssociation/datasourceMaster").getPath(),
|
||||
"-resultTableName", "eu.dnetlib.dhp.schema.oaf.Dataset"
|
||||
});
|
||||
|
||||
final JavaSparkContext sc = JavaSparkContext.fromSparkContext(spark.sparkContext());
|
||||
|
||||
JavaRDD<Dataset> tmp = sc
|
||||
.textFile(workingDir.toString() + "/input/dataset")
|
||||
.map(item -> OBJECT_MAPPER.readValue(item, Dataset.class));
|
||||
|
||||
Assertions.assertEquals(10, tmp.count());
|
||||
|
||||
Assertions
|
||||
.assertEquals(
|
||||
4,
|
||||
tmp
|
||||
.filter(
|
||||
s -> s.getContext().stream().anyMatch(c -> c.getId().equals("eosc")))
|
||||
.count());
|
||||
|
||||
Assertions
|
||||
.assertEquals(1,
|
||||
tmp
|
||||
.filter(d -> d.getId().equals("50|475c1990cbb2::0fecfb874d9395aa69d2f4d7cd1acbea")
|
||||
&&
|
||||
d.getContext().stream().anyMatch(c -> c.getId().equals("eosc"))).count()
|
||||
);
|
||||
Assertions
|
||||
.assertEquals(1,
|
||||
tmp
|
||||
.filter(d -> d.getId().equals("50|475c1990cbb2::3185cd5d8a2b0a06bb9b23ef11748eb1")
|
||||
&&
|
||||
d.getContext().stream().anyMatch(c -> c.getId().equals("eosc"))).count()
|
||||
);
|
||||
|
||||
|
||||
Assertions
|
||||
.assertEquals(1,
|
||||
tmp
|
||||
.filter(d -> d.getId().equals("50|475c1990cbb2::3894c94123e96df8a21249957cf160cb")
|
||||
&&
|
||||
d.getContext().stream().anyMatch(c -> c.getId().equals("eosc"))).count()
|
||||
);
|
||||
|
||||
Assertions
|
||||
.assertEquals(1,
|
||||
tmp
|
||||
.filter(d -> d.getId().equals("50|475c1990cbb2::3894c94123e96df8a21249957cf160cb")
|
||||
&&
|
||||
d.getContext().stream().anyMatch(c -> c.getId().equals("eosc"))).count()
|
||||
);
|
||||
}
|
||||
|
||||
|
||||
}
|
||||
File diff suppressed because one or more lines are too long
|
|
@ -0,0 +1,318 @@
|
|||
{"datasource":"eosc________::100percentit::100percentit.100_percent_it_trusted_cloud","master":"10|eosc________::7ef2576047f040612b983a27347471fc"}
|
||||
{"datasource":"eosc________::altec::altec.space-vis_adn_service","master":"10|eosc________::2946c48bbcc514ad76bbbf727d5d8fbc"}
|
||||
{"datasource":"eosc________::astron::astron.","master":"10|eosc________::acb262d4bfdeb6aa9b463a4a6d0d662a"}
|
||||
{"datasource":"eosc________::athena::athena.atmo-flud","master":"10|eosc________::ac448975e1d7f8b0266c8bb3b3992029"}
|
||||
{"datasource":"eosc________::athena::athena.uw-map","master":"10|eosc________::5f2a401cf8ce9dc22a3776cea519b594"}
|
||||
{"datasource":"eosc________::athena::athena.verbal_aggression_analyser_va_analyser","master":"10|eosc________::8b26233e89a50e3754972b1341130494"}
|
||||
{"datasource":"eosc________::authenix::authenix.authenix","master":"10|eosc________::3cd84764da5728473593a580efb29a40"}
|
||||
{"datasource":"eosc________::bineo::bineo.cos4bio","master":"10|eosc________::903e0526a6e56eeaf0e4561aa862ecb8"}
|
||||
{"datasource":"eosc________::blue-cloud::blue-cloud.phytoplankton_eovs","master":"10|eosc________::c2438d79b48baf817956f3856877b3b8"}
|
||||
{"datasource":"eosc________::bsc-es::bsc-es.bdrc_-_barcelona_dust_regional_center","master":"10|eosc________::756664ca614118315840eb8e985e4377"}
|
||||
{"datasource":"eosc________::bsc-es::bsc-es.openebench","master":"10|eosc________::69ed72b873b803feed5ba6ae47548419"}
|
||||
{"datasource":"eosc________::capsh::capsh.dissemin","master":"10|eosc________::e81587742e4107ce83723df17c27cb40"}
|
||||
{"datasource":"eosc________::carlzeissm::carlzeissm.aper","master":"10|eosc________::f3beb9ee5ee293b723e2edd6f990fde3"}
|
||||
{"datasource":"eosc________::ccsd::ccsd.episciences","master":"10|eosc________::e1e9de0dbf4bce79c49338d7cf9327e2"}
|
||||
{"datasource":"eosc________::cds::cds.simbad_simbad_astronomical_database_provides_basic_data_cross-identifications_bibliography_and_measurements_for_astronomical_objects_outside_the_solar_system","master":"10|eosc________::a1e41e71453ac32161f4ac3f5c0e0421"}
|
||||
{"datasource":"eosc________::centerdata::centerdata.surveycodingsorg","master":"10|eosc________::72db73ab253727c889905da50f506d10"}
|
||||
{"datasource":"eosc________::cesga::cesga.finisterrae","master":"10|eosc________::6af4303d93f72744cc4c3c815ed2c9a0"}
|
||||
{"datasource":"eosc________::cesnet::cesnet.metacentrum_cloud","master":"10|eosc________::cebfaa2d0b93502d56a8fbeb6b66cfbe"}
|
||||
{"datasource":"eosc________::cesnet::cesnet.object_based_storage","master":"10|eosc________::1c5b55339bb86ff997a256d42d7be4b0"}
|
||||
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{"datasource":"eosc________::grnet::grnet.ni4os-europe_login","master":"10|eosc________::aeaa8f7fc2948930bfa4f970cd96837e"}
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{"datasource":"eosc________::grycap::grycap.elastic_cloud_compute_cluster","master":"10|eosc________::c6d3c380ce5499d8d20cc9bbeb3b43ff"}
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{"datasource":"eosc________::grycap::grycap.infrastructure_manager","master":"10|eosc________::e8a2eeb06a205c3299af49f5c233ce16"}
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{"datasource":"eosc________::hn::hn.isidore","master":"10|re3data_____::fabe5c1aaa2e2d4c847e01647b87bf60"}
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{"datasource":"eosc________::hostkey::hostkey.gpu_servers_grant_program","master":"10|eosc________::d45f87107eb536b4be97e112fac15787"}
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{"datasource":"eosc________::icos_eric::icos_eric.data_discovery_and_access_portal","master":"10|eosc________::84ada2e91828ce72fa6d02736cdd90f1"}
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{"datasource":"eosc________::ifin-hh::ifin-hh.cloudifin","master":"10|eosc________::04d791df0b61b0f5060f241c70924991"}
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{"datasource":"eosc________::iisas::iisas.fedcloudclient_egi_fedcloud_client","master":"10|eosc________::3668885b6512a039673b9f4638c88600"}
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{"datasource":"eosc________::ill::ill.ill_data_portal","master":"10|eosc________::714498cf1efec13c2206db4b1e4f1c30"}
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{"datasource":"eosc________::ill::ill.panosc_software_catalogue","master":"10|eosc________::bc63c5a78abd38a7d9df043e0853a9ce"}
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{"datasource":"eosc________::inaf::inaf.space-ml_caesar_service","master":"10|eosc________::ba42c5e4332ff16c6cd28573012bc2f9"}
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{"datasource":"eosc________::inaf::inaf.space-vis_vialactea_service","master":"10|eosc________::ce2ca563bceae686b763326ed53e7b54"}
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{"datasource":"eosc________::infn::infn.dynamic_on_demand_analysis_service","master":"10|eosc________::f884894e05c5a54646f0b5715e5495d6"}
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{"datasource":"eosc________::infn::infn.fgsg_science_software_on_demand","master":"10|eosc________::452af4e76a64b6ee7e4bdc86527687f7"}
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{"datasource":"eosc________::infn::infn.indigo_identity_and_access_management","master":"10|eosc________::d23115c40a4e256725f140330d001861"}
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{"datasource":"eosc________::infn::infn.infn-cloud_object_storage_dice","master":"10|eosc________::fe0c28e8657cb84e3b775156106c03d1"}
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{"datasource":"eosc________::infn::infn.paas_orchestrator","master":"10|eosc________::146240bb16057a93e11631edee570f76"}
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{"datasource":"eosc________::infrafrontier::infrafrontier.training_in_mouse_functional_genomics","master":"10|eosc________::64d6597d10f4e617152f4a612a87eaba"}
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{"datasource":"eosc________::inria::inria.software_heritage_archive","master":"10|fairsharing_::2c758933af02c0b301906f2819ae1268"}
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{"datasource":"eosc________::jelastic::jelastic.platform-as-a-service","master":"10|eosc________::bfcae4ab00df41a3c43efbb879586e8f"}
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{"datasource":"eosc________::kit::kit.eosc-performance","master":"10|eosc________::e52ab75587c1dd98db80568197f04586"}
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{"datasource":"eosc________::kit::kit.o3as_ozone_assessment","master":"10|eosc________::aaf27a5f35a790617247abecd84b100f"}
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{"datasource":"eosc________::komanord::komanord.guardomic","master":"10|eosc________::b1e06c9d2c472e9441ee72e83a934d40"}
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{"datasource":"eosc________::lago::lago.onedatasim","master":"10|eosc________::2b2163e8b82320fed69a017a3e5fb657"}
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{"datasource":"eosc________::lifewatch-eric::lifewatch-eric.plants_identification_app","master":"10|eosc________::6fc6ed0894391496d3c4967d45933d1a"}
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{"datasource":"eosc________::lindatclariah-cz::lindatclariah-cz.elixirfm","master":"10|eosc________::6dd7c323776a028cef0619cb34bdf48c"}
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{"datasource":"eosc________::lindatclariah-cz::lindatclariah-cz.ker_-_keyword_extractor","master":"10|eosc________::09915f038900aa43cb0c76aa89f10cda"}
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{"datasource":"eosc________::lindatclariah-cz::lindatclariah-cz.lindatclariah-cz_repository","master":"10|eosc________::3daee6a29fb1d9a0f624cdd5973c33ea"}
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{"datasource":"eosc________::lindatclariah-cz::lindatclariah-cz.machine_translation","master":"10|eosc________::3ae4551729381cfd03c433fb0de0c971"}
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{"datasource":"eosc________::lindatclariah-cz::lindatclariah-cz.morphodita","master":"10|eosc________::f2ceebdc1a41d65504ff27f7297c833b"}
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{"datasource":"eosc________::lindatclariah-cz::lindatclariah-cz.nametag","master":"10|eosc________::71e3226e7a868e2215335ffb29073285"}
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{"datasource":"eosc________::lindatclariah-cz::lindatclariah-cz.udpipe_tool_for_lemmatization_morphological_analysis_pos_tagging_and_dependency_parsing_in_multiple_languages","master":"10|eosc________::2dfc64c2951d9be3f1e2b576633ea425"}
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{"datasource":"eosc________::lnec::lnec-pt.opencoasts_portal","master":"10|eosc________::7e99655aeda0b5f06efb3eea424dff54"}
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{"datasource":"eosc________::lnec::lnec.worsica_-_water_monitoring_sentinel_cloud_platform","master":"10|eosc________::c2f55ab774c3cbbd9a330eebaa74dc36"}
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{"datasource":"eosc________::materialscloud::materialscloud.aiiDA_lab","master":"10|eosc________::dfd970a812cf2e0298eb28c681bc109f"}
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{"datasource":"eosc________::materialscloud::materialscloud.materials_cloud_archive","master":"10|fairsharing_::a431d70133ef6cf688bc4f6093922b48"}
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{"datasource":"eosc________::meeo::meeo.adam_platform","master":"10|eosc________::b17fedb87dd9985b6a5e51db593446d6"}
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{"datasource":"eosc________::meeo::meeo.adam_space","master":"10|eosc________::24bfbca4cf4fedc5a4a662fe67a30d7e"}
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{"datasource":"eosc________::mobile_observation_integration_service::mobile_observation_integration_service.dark_sky_meter_datasource","master":"10|eosc________::160638e73224aeb7e4f98fd237672919"}
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||||
{"datasource":"eosc________::msw::msw.polaris_os","master":"10|eosc________::12348ba5b2c5902fd400cb3f1ab773ee"}
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{"datasource":"eosc________::obp::obp.thoth","master":"10|eosc________::680198ec3f51a744de8a7603d542a0e1"}
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||||
{"datasource":"eosc________::openaire::openaire.amnesia","master":"10|eosc________::ac57e2dd5b3ee01909d7a592523bb96f"}
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||||
{"datasource":"eosc________::openaire::openaire.argos","master":"10|eosc________::92145beb3257af0510ee61ef10d16870"}
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{"datasource":"eosc________::openaire::openaire.broker","master":"10|eosc________::c8c6e8d211d6df4ee8a187fa1134bd92"}
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{"datasource":"eosc________::openaire::openaire.data_provider_dashboard","master":"10|eosc________::809d4c77a7acf9ac0cc2990d4264ae51"}
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{"datasource":"eosc________::openaire::openaire.digital_humanities_and_cultural_heritage_openaire_community_gateway","master":"10|eosc________::b9110e9735dd467abc969fe8e2f1efa3"}
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||||
{"datasource":"eosc________::openaire::openaire.discovery_portal","master":"10|eosc________::992052173b689c8cea94e8e8d99f0238"}
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{"datasource":"eosc________::openaire::openaire.european_marine_science_openaire_dashboard","master":"10|eosc________::950a99851df85c90ec2e933e1d55e164"}
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||||
{"datasource":"eosc________::openaire::openaire.funder_dashboard","master":"10|eosc________::196eea80ab9d73766cd2e8b6ab85872f"}
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||||
{"datasource":"eosc________::openaire::openaire.graph","master":"10|eosc________::c122caed52a88b57732b814a74141000"}
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{"datasource":"eosc________::openaire::openaire.greek_sustainable_development_solutions_network_sdsn_openaire_dashboard","master":"10|eosc________::8100e41e3a5b18170bc5ede2cc393331"}
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||||
{"datasource":"eosc________::openaire::openaire.inference","master":"10|eosc________::c491811e9a6afa69cdcab0f92fca6f7b"}
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||||
{"datasource":"eosc________::openaire::openaire.neuroinformatics_openaire_dashboard","master":"10|eosc________::6e3adcce4d0d4229a9749584dfd5e7a8"}
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||||
{"datasource":"eosc________::openaire::openaire.open_science_helpdesk","master":"10|eosc________::d66db88d4c6c354fe7ebcd4c3dce334e"}
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{"datasource":"eosc________::openaire::openaire.open_science_observatory","master":"10|eosc________::441ee64860eb79808b7cf0bb08262be6"}
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{"datasource":"eosc________::openaire::openaire.openaire_login","master":"10|eosc________::818973a9375c0fa545499e1bb9ad0ab2"}
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{"datasource":"eosc________::openaire::openaire.openapc","master":"10|eosc________::a28cc193bc938573e892b8aad0017702"}
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{"datasource":"eosc________::openaire::openaire.research_community_dashboard","master":"10|eosc________::e1a866322f76407fb161a253dc5b539c"}
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{"datasource":"eosc________::openaire::openaire.scholexplorer","master":"10|eosc________::6b34adede04121175566ef8c70f1e520"}
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{"datasource":"eosc________::openaire::openaire.technical_support_towards_openaire_compliance","master":"10|eosc________::cdb8e94b386f9b6780a47194bd1bc7f7"}
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||||
{"datasource":"eosc________::openaire::openaire.topos_observatory_for_organisations","master":"10|eosc________::a7d2b95257273b5ea3f3a23fd8a60d48"}
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{"datasource":"eosc________::openaire::openaire.usage_statistics","master":"10|eosc________::8aa345dc7321fc97906bf4c193a05a8f"}
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{"datasource":"eosc________::openaire::openaire.validator","master":"10|eosc________::f2c13efbaa2a33af3e4e6a54805ac379"}
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{"datasource":"eosc________::openaire::openaire.zenodo","master":"10|opendoar____::358aee4cc897452c00244351e4d91f69"}
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{"datasource":"eosc________::openbiomaps::openbiomaps.openbiomaps","master":"10|eosc________::32edf5a4edbdea0899d6ba588d083efd"}
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{"datasource":"eosc________::openedition::openedition.operas_research_for_society","master":"10|eosc________::2cdf4f57007b990b7ad7a884796f9b15"}
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{"datasource":"eosc________::openknowledgemaps::openknowledgemaps.open_knowledge_maps","master":"10|eosc________::f3819d0f8e8bf57d383b23d31a3c0099"}
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{"datasource":"eosc________::openminted::openminted.builder_of_tdm_applications","master":"10|eosc________::fdd26c19dd490260bc6c48b5813f4ac3"}
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{"datasource":"eosc________::openminted::openminted.catalogue_of_ancillary_resources","master":"10|eosc________::ab4e37e85a1975b204b66683ed3888a8"}
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{"datasource":"eosc________::openminted::openminted.catalogue_of_corpora","master":"10|eosc________::2cf744a594ea30fd31e976bffa8f2b71"}
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{"datasource":"eosc________::openminted::openminted.support_and_training","master":"10|eosc________::84501ff99e5e429f5f083ab8ca0be7e4"}
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{"datasource":"eosc________::operas::operas.gotriple_discovery_platform","master":"10|eosc________::f687e24dc56aaeeb561c95865a5071cc"}
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{"datasource":"eosc________::operas::operas.operas_metrics_service","master":"10|eosc________::5960e1289f623625210f720c6173592d"}
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{"datasource":"eosc________::osmooc::osmooc.open_science_mooc","master":"10|eosc________::e101101e8653b6607a3ad9fea3b7d1fe"}
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{"datasource":"eosc________::phenomenal::phenomenal.phenomenal","master":"10|eosc________::79e19b14aeee0d94e9a79110a6e6ad32"}
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{"datasource":"eosc________::plantnet::plantnet.plntnet_identification_service","master":"10|eosc________::5ce89743eafdd8578591d84150f547e4"}
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{"datasource":"eosc________::prace::prace.application_enabling_support","master":"10|eosc________::c87fd74ed685337fdbcff504373fc513"}
|
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{"datasource":"eosc________::prace::prace.code_vault","master":"10|eosc________::dbab7889c81b59ec753040a762f6569a"}
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{"datasource":"eosc________::prace::prace.deci_access","master":"10|eosc________::c7cedb82b1beea5382601d48807212aa"}
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{"datasource":"eosc________::prace::prace.mooc","master":"10|eosc________::d6ff8167d31dccebe33a272513422b53"}
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{"datasource":"eosc________::prace::prace.patc","master":"10|eosc________::1ab1b123bd559ee7f7c7ec2ee353f0c0"}
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{"datasource":"eosc________::prace::prace.preparatory_access","master":"10|eosc________::39430adf529f1ab9e33da444b3708fcf"}
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{"datasource":"eosc________::prace::prace.project_access","master":"10|eosc________::b58e957946983b686c76ee19dfab8d70"}
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{"datasource":"eosc________::prace::prace.ptc","master":"10|eosc________::b3ca18e8884bfe2422d3723313fef79c"}
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{"datasource":"eosc________::prace::prace.seasonal_schools_and_international_summer_school","master":"10|eosc________::590c71318d9d94c32981e3195567d546"}
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{"datasource":"eosc________::prace::prace.shape","master":"10|eosc________::38b5a26f74e4808270a2d4f305d2f3a5"}
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{"datasource":"eosc________::prace::prace.training_portal","master":"10|eosc________::25966a269ab2343ac9c4d982c341d87f"}
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{"datasource":"eosc________::predictia::predictia.climadjust","master":"10|eosc________::14743eb22da3524893784faf409aac70"}
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{"datasource":"eosc________::psi::psi.psi_public_data_repository","master":"10|re3data_____::1e55174ff77ed2d804871281201dbb50"}
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{"datasource":"eosc________::psi::psi.remote_desktop_service","master":"10|eosc________::c82e26eb6e65d008de03b349dffc11fc"}
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{"datasource":"eosc________::psnc::psnc.rohub","master":"10|eosc________::c87f08707b5235172e85b374e39a82dc"}
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{"datasource":"eosc________::psnc::psnc.symbiote","master":"10|eosc________::ef0cd965a0d0a3df80ecfae4b3b08aad"}
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{"datasource":"eosc________::rasdaman::rasdaman.datacube","master":"10|eosc________::bb1678f7b15d8c15fde6e240a4f95f93"}
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{"datasource":"eosc________::rbi::rbi.dariah_science_gateway","master":"10|eosc________::b51b448421d926293b3781f4ac90f4f4"}
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{"datasource":"eosc________::readcoop::readcoop.transkribus","master":"10|eosc________::a80411026809e6eaa896439e1b9764f4"}
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{"datasource":"eosc________::rli::rli.open_energy_platform","master":"10|fairsharing_::0cbed40c0d920b94126eaf5e707be1f5"}
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{"datasource":"eosc________::ror-org::ror-org.identifier","master":"10|eosc________::6fe92c2346db22322ddf6b677d449b0e"}
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{"datasource":"eosc________::sciences_po::sciences_po.ethnic_and_migrant_minority_survey_registry","master":"10|eosc________::0cde986dc2bf015912e407f0f83ee402"}
|
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{"datasource":"eosc________::sciences_po::sciences_po.wpss_for_ess","master":"10|eosc________::9a5bb11c495443aad944b04f5fcb5c07"}
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{"datasource":"eosc________::scigne::scigne.cloud_compute","master":"10|eosc________::7c63e3284c36b5977c553192dce506b3"}
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{"datasource":"eosc________::scipedia::scipedia.scipedia","master":"10|eosc________::850abcddc76069f2c3c1cf77ad4beec9"}
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{"datasource":"eosc________::scipedia::scipedia.topos_for_individuals","master":"10|eosc________::e6214b58f39a25b53eecda340f95ee7b"}
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{"datasource":"eosc________::seadatanet::seadatanet.doi_minting_service","master":"10|eosc________::f87f72147a3c82c4f77684e40101e90e"}
|
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{"datasource":"eosc________::seadatanet::seadatanet.european_directory_of_marine_environmental_data_edmed","master":"10|eosc________::d79706389f0b864306feb47aac1f5766"}
|
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{"datasource":"eosc________::seadatanet::seadatanet.european_directory_of_marine_environmental_research_projects","master":"10|eosc________::baa9d2d6cdd8507fcbf76242e4c25d76"}
|
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{"datasource":"eosc________::seadatanet::seadatanet.european_directory_of_marine_organisations_edmo","master":"10|eosc________::5d23c66c26e0df209fc415c1e9ad0316"}
|
||||
{"datasource":"eosc________::seadatanet::seadatanet.european_directory_of_the_cruise_summary_reports_csr","master":"10|eosc________::fd70912c66037dc11f710587e281eeaf"}
|
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{"datasource":"eosc________::seadatanet::seadatanet.european_directory_of_the_initial_ocean-observing_systems_edios","master":"10|eosc________::846016e987d1feaf2a36083f88dba1f2"}
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{"datasource":"eosc________::seadatanet::seadatanet.seadatanet_cdi","master":"10|eosc________::36cd158d6b1bbdbfb443c68b8da00335"}
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{"datasource":"eosc________::seadatanet::seadatanet.vocabulary_services_-_underpinned_by_the_nerc_vocabulary_server_nvs","master":"10|eosc________::4416d18ec7a57e553979fbfa4d862483"}
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{"datasource":"eosc________::sinergise::sinergise.sentinel_hub","master":"10|eosc________::d36ae944fa207461bcb7b2b3a6c94de8"}
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{"datasource":"eosc________::sixsq::sixsq.nuvla_multi-cloud_application_management_platform","master":"10|eosc________::38438cc3190a3815359efb53b9dd98eb"}
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{"datasource":"eosc________::sks::sks.digital_production_for_conferences_workshops_roundtables_and_other_academic_and_professional_events","master":"10|eosc________::f6b51bef4a5f1478e980673339f2b2f3"}
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{"datasource":"eosc________::smartsmear::smartsmear.smartsmear","master":"10|eosc________::d17a9325ca64ffad59e04659ed5404f7"}
|
||||
{"datasource":"eosc________::sobigdata::sobigdata.tagme","master":"10|eosc________::0c3b8b80d9d6d38effd28bfa6a140a12"}
|
||||
{"datasource":"eosc________::suite5::suite5.furniture_enterprise_analytics","master":"10|eosc________::29ed60070bd91bdc19c9f278b104465c"}
|
||||
{"datasource":"eosc________::switch::switch.switchengines","master":"10|eosc________::d4143918a810115206640cfeb11e0ba6"}
|
||||
{"datasource":"eosc________::t-systems::t-systems.open_telekom_cloud","master":"10|eosc________::c489ef6564a47922359f7b833919d642"}
|
||||
{"datasource":"eosc________::terradue::terradue.eo_services_for_earthquake_response_and_landslides_analysis","master":"10|eosc________::ab3140d145deb5fdb02eeefbc5ebc471"}
|
||||
{"datasource":"eosc________::tib::tib.open_research_knowledge_graph_orkg","master":"10|eosc________::ed6bd695c7a99297f360bc2fc915be90"}
|
||||
{"datasource":"eosc________::ubora::ubora.ubora","master":"10|eosc________::bacf05aff1c6dcf3133a0352d5eb14c4"}
|
||||
{"datasource":"eosc________::ubora::ubora.ubora_e-platform","master":"10|eosc________::947fde33605ba61216a07135ee1551f2"}
|
||||
{"datasource":"eosc________::ugr-es::ugr-es.glacier_lagoons_of_sierra_nevada","master":"10|eosc________::8a966c0efca298ad5ec130d323c29935"}
|
||||
{"datasource":"eosc________::uit::uit.dataverseno","master":"10|eosc________::92b76aa81a5b8443fcf17d3ae3c34211"}
|
||||
{"datasource":"eosc________::uit::uit.the_troms_repository_of_language_and_linguistics_trolling","master":"10|fairsharing_::a36b0dcd1e6384abc0e1867860ad3ee3"}
|
||||
{"datasource":"eosc________::ukaea::ukaea.prominence","master":"10|eosc________::06ce999c7cf77ea5a65f87bb563cd625"}
|
||||
{"datasource":"eosc________::ukri_-_stfc::ukri_-_stfc.cvmfs_test","master":"10|eosc________::53aaa0a24d0edc47c23e722135c29dde"}
|
||||
{"datasource":"eosc________::ukri_-_stfc::ukri_-_stfc.rucio","master":"10|eosc________::c19a8251c6bf563365c555572ace903e"}
|
||||
{"datasource":"eosc________::uni-freiburg::uni-freiburg.european_galaxy_server","master":"10|eosc________::cc00fc2385475b80accec001dfb85efb"}
|
||||
{"datasource":"eosc________::unibo::unibo.opencitations","master":"10|eosc________::573c29ecaf76ab961743bfc8a7d911ec"}
|
||||
{"datasource":"eosc________::unifl::unifl.snap4city","master":"10|eosc________::9a55c40c3c082b7a8352ecbc56a87996"}
|
||||
{"datasource":"eosc________::unige::unige.astronomical_online_data_analysis_astrooda","master":"10|eosc________::63f6119d3170cccf979daada3c5b524e"}
|
||||
{"datasource":"eosc________::unitartu::unitartu.ut.rocket","master":"10|eosc________::da3450589a9d56212963b20cf729974c"}
|
||||
{"datasource":"eosc________::upv-es::upv-es.lemonade","master":"10|eosc________::afdd227beada491f77d7944d7a0eafc9"}
|
||||
{"datasource":"eosc________::vamdc::vamdc.portal","master":"10|eosc________::4dab2bb6e9a9ad223cd63c62c2ea804e"}
|
||||
{"datasource":"eosc________::vamdc::vamdc.query_store","master":"10|eosc________::33f18bfe544c3c84ac28be6a3292d166"}
|
||||
{"datasource":"eosc________::vamdc::vamdc.species_database","master":"10|eosc________::ae3587682dec5663a1b3b625036d15d0"}
|
||||
{"datasource":"eosc________::vilnius-university::vilnius-university.the_national_open_access_research_data_archive_midas","master":"10|eosc________::4987ee0d071f68cf88f6b1a834b6733f"}
|
||||
{"datasource":"eosc________::wenmr::wenmr.amber-based_portal_server_for_nmr_structures_amps-nmr","master":"10|eosc________::c6cca9747ef3ce296bd626bcbc4e480a"}
|
||||
{"datasource":"eosc________::wenmr::wenmr.disvis_web_portal","master":"10|eosc________::2539ec693b683284c4e243b969ae3fc0"}
|
||||
{"datasource":"eosc________::wenmr::wenmr.fanten_finding_anisotropy_tensor","master":"10|eosc________::99c793e3f3b856c48eaaa36682038b28"}
|
||||
{"datasource":"eosc________::wenmr::wenmr.haddock24_web_portal","master":"10|eosc________::0f198f6a0885105809f420be23614be3"}
|
||||
{"datasource":"eosc________::wenmr::wenmr.metalpdb","master":"10|eosc________::84676bc3d2ce17de70309dc58f428296"}
|
||||
{"datasource":"eosc________::wenmr::wenmr.pdb-tools_web","master":"10|eosc________::b37eed45624ac30f3476f71640e59a61"}
|
||||
{"datasource":"eosc________::wenmr::wenmr.powerfit_web_portal","master":"10|eosc________::93d4d621ed1da378c0e7dc891cefc007"}
|
||||
{"datasource":"eosc________::wenmr::wenmr.spoton","master":"10|eosc________::76e7e0552f9c6b89db94b31ddc366b9f"}
|
||||
Loading…
Reference in New Issue