From 5281f010a57a54be394a202c391b964cdcc1333b Mon Sep 17 00:00:00 2001 From: Sandro La Bruzzo Date: Wed, 14 Feb 2024 11:41:28 +0100 Subject: [PATCH] applied cherry pick --- .../collection/plugin/oai/OaiIterator.java | 2 +- .../collection/crossref/Crossref2Oaf.scala | 113 +- .../convert_crossref_dump_to_oaf_params.json | 28 +- .../doiboost/crossref/Crossref2Oaf.scala | 166 +- .../crossref/SparkMapDumpIntoOAF.scala | 10 +- .../aggregation/AbstractVocabularyTest.java | 51 + .../eu/dnetlib/dhp/doiboost/synonyms.txt | 1500 +++++++++++++++++ .../eu/dnetlib/dhp/doiboost/terms.txt | 1213 +++++++++++++ .../dnetlib/doiboost/crossref/preprint.json | 2 +- .../crossref/CrossrefMappingTest.scala | 115 +- 10 files changed, 3008 insertions(+), 192 deletions(-) create mode 100644 dhp-workflows/dhp-doiboost/src/test/java/eu/dnetlib/dhp/aggregation/AbstractVocabularyTest.java create mode 100644 dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/dhp/doiboost/synonyms.txt create mode 100644 dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/dhp/doiboost/terms.txt diff --git a/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/collection/plugin/oai/OaiIterator.java b/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/collection/plugin/oai/OaiIterator.java index 8f4a9e393..bebe5f01d 100644 --- a/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/collection/plugin/oai/OaiIterator.java +++ b/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/collection/plugin/oai/OaiIterator.java @@ -165,7 +165,7 @@ public class OaiIterator implements Iterator { } catch (final DocumentException e1) { final String resumptionToken = extractResumptionToken(xml); if (resumptionToken == null) { - report.put(e1.getClass().getName(), e1.getMessage()); + report.put(e1.getClass().getName(), e1.getMessage()); throw new CollectorException("Error parsing cleaned document:\n" + cleaned, e1); } return resumptionToken; diff --git a/dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/collection/crossref/Crossref2Oaf.scala b/dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/collection/crossref/Crossref2Oaf.scala index 420943ca1..6e278ef73 100644 --- a/dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/collection/crossref/Crossref2Oaf.scala +++ b/dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/collection/crossref/Crossref2Oaf.scala @@ -1,5 +1,6 @@ package eu.dnetlib.dhp.collection.crossref +import eu.dnetlib.dhp.common.vocabulary.VocabularyGroup import eu.dnetlib.dhp.schema.common.ModelConstants import eu.dnetlib.dhp.schema.oaf._ import eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.{field, qualifier, structuredProperty, subject} @@ -48,6 +49,13 @@ case object Crossref2Oaf { json.extract[List[funderInfo]] } + def getIrishId(doi: String): Option[String] = { + val id = doi.split("/").last + irishFunder + .find(f => id.equalsIgnoreCase(f.id) || (f.synonym.nonEmpty && f.synonym.exists(s => s.equalsIgnoreCase(id)))) + .map(f => f.id) + } + def createCrossrefCollectedFrom(): KeyValue = { val cf = new KeyValue @@ -190,14 +198,8 @@ case object Crossref2Oaf { } - def getIrishId(doi: String): Option[String] = { - val id = doi.split("/").last - irishFunder - .find(f => id.equalsIgnoreCase(f.id) || (f.synonym.nonEmpty && f.synonym.exists(s => s.equalsIgnoreCase(id)))) - .map(f => f.id) - } - def mappingResult(result: Result, json: JValue, cobjCategory: String, originalType: String): Result = { + def mappingResult(result: Result, json: JValue, instanceType:Qualifier, originalType: String): Result = { implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats //MAPPING Crossref DOI into PID @@ -370,27 +372,13 @@ case object Crossref2Oaf { instance.setAccessright( decideAccessRight(instance.getLicense, result.getDateofacceptance.getValue) ) - instance.setInstancetype( - OafMapperUtils.qualifier( - cobjCategory.substring(0, 4), - cobjCategory.substring(5), - ModelConstants.DNET_PUBLICATION_RESOURCE, - ModelConstants.DNET_PUBLICATION_RESOURCE - ) - ) + instance.setInstancetype(instanceType) + //ADD ORIGINAL TYPE to the mapping val itm = new InstanceTypeMapping itm.setOriginalType(originalType) itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1) instance.setInstanceTypeMapping(List(itm).asJava) - result.setResourcetype( - OafMapperUtils.qualifier( - cobjCategory.substring(0, 4), - cobjCategory.substring(5), - ModelConstants.DNET_PUBLICATION_RESOURCE, - ModelConstants.DNET_PUBLICATION_RESOURCE - ) - ) instance.setCollectedfrom(createCrossrefCollectedFrom()) if (StringUtils.isNotBlank(issuedDate)) { @@ -452,7 +440,40 @@ case object Crossref2Oaf { a } - def convert(input: String): List[Oaf] = { + /** * + * Use the vocabulary dnet:publication_resource to find a synonym to one of these terms and get the instance.type. + * Using the dnet:result_typologies vocabulary, we look up the instance.type synonym + * to generate one of the following main entities: + * - publication + * - dataset + * - software + * - otherresearchproduct + * + * @param resourceType + * @param vocabularies + * @return + */ + def getTypeQualifier( + resourceType: String, + vocabularies: VocabularyGroup + ): (Qualifier, Qualifier, String) = { + if (resourceType != null && resourceType.nonEmpty) { + val typeQualifier = + vocabularies.getSynonymAsQualifier(ModelConstants.DNET_PUBLICATION_RESOURCE, resourceType) + if (typeQualifier != null) + return ( + typeQualifier, + vocabularies.getSynonymAsQualifier( + ModelConstants.DNET_RESULT_TYPOLOGIES, + typeQualifier.getClassid + ), + resourceType + ) + } + null + } + + def convert(input: String, vocabularies: VocabularyGroup): List[Oaf] = { implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats lazy val json: json4s.JValue = parse(input) @@ -462,17 +483,17 @@ case object Crossref2Oaf { val objectSubType = (json \ "subtype").extractOrElse[String](null) if (objectType == null) return resultList + val typology =getTypeQualifier(objectType, vocabularies) - val result = generateItemFromType(objectType, objectSubType) + if (typology == null) + return List() + + val result = generateItemFromType(typology._2) if (result == null) return List() - val cOBJCategory = mappingCrossrefSubType.getOrElse( - objectType, - mappingCrossrefSubType.getOrElse(objectSubType, "0038 Other literature type") - ) - val originalType = if (mappingCrossrefSubType.contains(objectType)) objectType else objectSubType - mappingResult(result, json, cOBJCategory, originalType) + mappingResult(result, json, typology._1, typology._3) + if (result == null || result.getId == null) return List() @@ -490,7 +511,7 @@ case object Crossref2Oaf { } result match { - case publication: Publication => convertPublication(publication, json, cOBJCategory) + case publication: Publication => convertPublication(publication, json, typology._1) case dataset: Dataset => convertDataset(dataset) } @@ -720,12 +741,12 @@ case object Crossref2Oaf { // TODO check if there are other info to map into the Dataset } - def convertPublication(publication: Publication, json: JValue, cobjCategory: String): Unit = { + def convertPublication(publication: Publication, json: JValue, cobjCategory: Qualifier): Unit = { implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats val containerTitles = for { JString(ct) <- json \ "container-title" } yield ct //Mapping book - if (cobjCategory.toLowerCase.contains("book")) { + if (cobjCategory.getClassname.toLowerCase.contains("book")) { val ISBN = for { JString(isbn) <- json \ "ISBN" } yield isbn if (ISBN.nonEmpty && containerTitles.nonEmpty) { val source = s"${containerTitles.head} ISBN: ${ISBN.head}" @@ -806,12 +827,24 @@ case object Crossref2Oaf { null } - def generateItemFromType(objectType: String, objectSubType: String): Result = { - if (mappingCrossrefType.contains(objectType)) { - if (mappingCrossrefType(objectType).equalsIgnoreCase("publication")) - return new Publication() - if (mappingCrossrefType(objectType).equalsIgnoreCase("dataset")) - return new Dataset() + def generateItemFromType(objectType: Qualifier): Result = { + if (objectType.getClassid.equalsIgnoreCase("publication")) { + val item = new Publication + item.setResourcetype(objectType) + return item + } else if (objectType.getClassid.equalsIgnoreCase("dataset")) { + val item = new Dataset + item.setResourcetype(objectType) + return item + } + else if (objectType.getClassid.equalsIgnoreCase("software")){ + val item = new Software + item.setResourcetype(objectType) + return item + }else if (objectType.getClassid.equalsIgnoreCase("OtherResearchProduct")){ + val item = new OtherResearchProduct + item.setResourcetype(objectType) + return item } null } diff --git a/dhp-workflows/dhp-doiboost/src/main/resources/eu/dnetlib/dhp/doiboost/convert_crossref_dump_to_oaf_params.json b/dhp-workflows/dhp-doiboost/src/main/resources/eu/dnetlib/dhp/doiboost/convert_crossref_dump_to_oaf_params.json index da324f8c4..571dfdcae 100644 --- a/dhp-workflows/dhp-doiboost/src/main/resources/eu/dnetlib/dhp/doiboost/convert_crossref_dump_to_oaf_params.json +++ b/dhp-workflows/dhp-doiboost/src/main/resources/eu/dnetlib/dhp/doiboost/convert_crossref_dump_to_oaf_params.json @@ -1,6 +1,26 @@ [ - {"paramName":"t", "paramLongName":"targetPath", "paramDescription": "the path of the OAF Orcid transformed", "paramRequired": true}, - {"paramName":"s", "paramLongName":"sourcePath", "paramDescription": "the source path ", "paramRequired": false}, - {"paramName":"m", "paramLongName":"master", "paramDescription": "the master name", "paramRequired": true} - + { + "paramName": "t", + "paramLongName": "targetPath", + "paramDescription": "the path of the OAF Orcid transformed", + "paramRequired": true + }, + { + "paramName": "i", + "paramLongName": "isLookupUrl", + "paramDescription": "the isLookup URL", + "paramRequired": true + }, + { + "paramName": "s", + "paramLongName": "sourcePath", + "paramDescription": "the source path ", + "paramRequired": false + }, + { + "paramName": "m", + "paramLongName": "master", + "paramDescription": "the master name", + "paramRequired": true + } ] \ No newline at end of file diff --git a/dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/Crossref2Oaf.scala b/dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/Crossref2Oaf.scala index 64090733d..cbdafeb1e 100644 --- a/dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/Crossref2Oaf.scala +++ b/dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/Crossref2Oaf.scala @@ -1,5 +1,6 @@ -package eu.dnetlib.doiboost.crossref + package eu.dnetlib.doiboost.crossref +import eu.dnetlib.dhp.common.vocabulary.VocabularyGroup import eu.dnetlib.dhp.schema.common.ModelConstants import eu.dnetlib.dhp.schema.oaf._ import eu.dnetlib.dhp.schema.oaf.utils.{GraphCleaningFunctions, IdentifierFactory, OafMapperUtils} @@ -47,67 +48,16 @@ case object Crossref2Oaf { json.extract[List[funderInfo]] } - val mappingCrossrefType = Map( - "book-section" -> "publication", - "book" -> "publication", - "book-chapter" -> "publication", - "book-part" -> "publication", - "book-series" -> "publication", - "book-set" -> "publication", - "book-track" -> "publication", - "edited-book" -> "publication", - "reference-book" -> "publication", - "monograph" -> "publication", - "journal-article" -> "publication", - "dissertation" -> "publication", - "other" -> "publication", - "peer-review" -> "publication", - "proceedings" -> "publication", - "proceedings-article" -> "publication", - "reference-entry" -> "publication", - "report" -> "publication", - "report-series" -> "publication", - "standard" -> "publication", - "standard-series" -> "publication", - "posted-content" -> "publication", - "dataset" -> "dataset" - ) - - val mappingCrossrefSubType = Map( - "book-section" -> "0013 Part of book or chapter of book", - "book" -> "0002 Book", - "book-chapter" -> "0013 Part of book or chapter of book", - "book-part" -> "0013 Part of book or chapter of book", - "book-series" -> "0002 Book", - "book-set" -> "0002 Book", - "book-track" -> "0002 Book", - "edited-book" -> "0002 Book", - "reference-book" -> "0002 Book", - "monograph" -> "0002 Book", - "journal-article" -> "0001 Article", - "dissertation" -> "0044 Thesis", - "other" -> "0038 Other literature type", - "peer-review" -> "0015 Review", - "proceedings" -> "0004 Conference object", - "proceedings-article" -> "0004 Conference object", - "reference-entry" -> "0013 Part of book or chapter of book", - "report" -> "0017 Report", - "report-series" -> "0017 Report", - "standard" -> "0038 Other literature type", - "standard-series" -> "0038 Other literature type", - "dataset" -> "0021 Dataset", - "preprint" -> "0016 Preprint", - "report" -> "0017 Report" - ) - - def getIrishId(doi: String): Option[String] = { + def getIrishId(doi: String): Option[String] = { val id = doi.split("/").last irishFunder .find(f => id.equalsIgnoreCase(f.id) || (f.synonym.nonEmpty && f.synonym.exists(s => s.equalsIgnoreCase(id)))) .map(f => f.id) } - def mappingResult(result: Result, json: JValue, cobjCategory: String, originalType: String): Result = { + + + def mappingResult(result: Result, json: JValue, instanceType:Qualifier, originalType: String): Result = { implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats //MAPPING Crossref DOI into PID @@ -275,27 +225,20 @@ case object Crossref2Oaf { instance.setAccessright( decideAccessRight(instance.getLicense, result.getDateofacceptance.getValue) ) - instance.setInstancetype( - OafMapperUtils.qualifier( - cobjCategory.substring(0, 4), - cobjCategory.substring(5), - ModelConstants.DNET_PUBLICATION_RESOURCE, - ModelConstants.DNET_PUBLICATION_RESOURCE - ) - ) + instance.setInstancetype(instanceType) //ADD ORIGINAL TYPE to the mapping val itm = new InstanceTypeMapping itm.setOriginalType(originalType) itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1) instance.setInstanceTypeMapping(List(itm).asJava) - result.setResourcetype( - OafMapperUtils.qualifier( - cobjCategory.substring(0, 4), - cobjCategory.substring(5), - ModelConstants.DNET_PUBLICATION_RESOURCE, - ModelConstants.DNET_PUBLICATION_RESOURCE - ) - ) +// result.setResourcetype( +// OafMapperUtils.qualifier( +// cobjCategory.substring(0, 4), +// cobjCategory.substring(5), +// ModelConstants.DNET_PUBLICATION_RESOURCE, +// ModelConstants.DNET_PUBLICATION_RESOURCE +// ) +// ) instance.setCollectedfrom(createCrossrefCollectedFrom()) if (StringUtils.isNotBlank(issuedDate)) { @@ -354,7 +297,40 @@ case object Crossref2Oaf { a } - def convert(input: String): List[Oaf] = { + /** * + * Use the vocabulary dnet:publication_resource to find a synonym to one of these terms and get the instance.type. + * Using the dnet:result_typologies vocabulary, we look up the instance.type synonym + * to generate one of the following main entities: + * - publication + * - dataset + * - software + * - otherresearchproduct + * + * @param resourceType + * @param vocabularies + * @return + */ + def getTypeQualifier( + resourceType: String, + vocabularies: VocabularyGroup + ): (Qualifier, Qualifier, String) = { + if (resourceType != null && resourceType.nonEmpty) { + val typeQualifier = + vocabularies.getSynonymAsQualifier(ModelConstants.DNET_PUBLICATION_RESOURCE, resourceType) + if (typeQualifier != null) + return ( + typeQualifier, + vocabularies.getSynonymAsQualifier( + ModelConstants.DNET_RESULT_TYPOLOGIES, + typeQualifier.getClassid + ), + resourceType + ) + } + null + } + + def convert(input: String, vocabularies: VocabularyGroup): List[Oaf] = { implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats lazy val json: json4s.JValue = parse(input) @@ -364,17 +340,17 @@ case object Crossref2Oaf { val objectSubType = (json \ "subtype").extractOrElse[String](null) if (objectType == null) return resultList + val typology =getTypeQualifier(objectType, vocabularies) - val result = generateItemFromType(objectType, objectSubType) + if (typology == null) + return List() + + val result = generateItemFromType(typology._2) if (result == null) return List() - val cOBJCategory = mappingCrossrefSubType.getOrElse( - objectType, - mappingCrossrefSubType.getOrElse(objectSubType, "0038 Other literature type") - ) - val originalType = if (mappingCrossrefSubType.contains(objectType)) objectType else objectSubType - mappingResult(result, json, cOBJCategory, originalType) + + mappingResult(result, json, typology._1, typology._3) if (result == null || result.getId == null) return List() @@ -392,7 +368,7 @@ case object Crossref2Oaf { } result match { - case publication: Publication => convertPublication(publication, json, cOBJCategory) + case publication: Publication => convertPublication(publication, json, typology._1) case dataset: Dataset => convertDataset(dataset) } @@ -622,12 +598,12 @@ case object Crossref2Oaf { // TODO check if there are other info to map into the Dataset } - def convertPublication(publication: Publication, json: JValue, cobjCategory: String): Unit = { + def convertPublication(publication: Publication, json: JValue, cobjCategory: Qualifier): Unit = { implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats val containerTitles = for { JString(ct) <- json \ "container-title" } yield ct //Mapping book - if (cobjCategory.toLowerCase.contains("book")) { + if (cobjCategory.getClassname.toLowerCase.contains("book")) { val ISBN = for { JString(isbn) <- json \ "ISBN" } yield isbn if (ISBN.nonEmpty && containerTitles.nonEmpty) { val source = s"${containerTitles.head} ISBN: ${ISBN.head}" @@ -708,12 +684,24 @@ case object Crossref2Oaf { null } - def generateItemFromType(objectType: String, objectSubType: String): Result = { - if (mappingCrossrefType.contains(objectType)) { - if (mappingCrossrefType(objectType).equalsIgnoreCase("publication")) - return new Publication() - if (mappingCrossrefType(objectType).equalsIgnoreCase("dataset")) - return new Dataset() + def generateItemFromType(objectType: Qualifier): Result = { + if (objectType.getClassid.equalsIgnoreCase("publication")) { + val item = new Publication + item.setResourcetype(objectType) + return item + } else if (objectType.getClassid.equalsIgnoreCase("dataset")) { + val item = new Dataset + item.setResourcetype(objectType) + return item + } + else if (objectType.getClassid.equalsIgnoreCase("software")){ + val item = new Software + item.setResourcetype(objectType) + return item + }else if (objectType.getClassid.equalsIgnoreCase("OtherResearchProduct")){ + val item = new OtherResearchProduct + item.setResourcetype(objectType) + return item } null } diff --git a/dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/SparkMapDumpIntoOAF.scala b/dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/SparkMapDumpIntoOAF.scala index 96923f000..5b2801289 100644 --- a/dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/SparkMapDumpIntoOAF.scala +++ b/dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/SparkMapDumpIntoOAF.scala @@ -1,8 +1,10 @@ package eu.dnetlib.doiboost.crossref import eu.dnetlib.dhp.application.ArgumentApplicationParser +import eu.dnetlib.dhp.common.vocabulary.VocabularyGroup import eu.dnetlib.dhp.schema.oaf import eu.dnetlib.dhp.schema.oaf.{Oaf, Publication, Relation, Dataset => OafDataset} +import eu.dnetlib.dhp.utils.ISLookupClientFactory import org.apache.commons.io.IOUtils import org.apache.spark.SparkConf import org.apache.spark.sql._ @@ -40,11 +42,17 @@ object SparkMapDumpIntoOAF { implicit val mapEncoderDatasets: Encoder[oaf.Dataset] = Encoders.kryo[OafDataset] val targetPath = parser.get("targetPath") + val isLookupUrl: String = parser.get("isLookupUrl") + logger.info("isLookupUrl: {}", isLookupUrl) + val isLookupService = ISLookupClientFactory.getLookUpService(isLookupUrl) + val vocabularies = VocabularyGroup.loadVocsFromIS(isLookupService) + require(vocabularies != null) + spark.read .load(parser.get("sourcePath")) .as[CrossrefDT] - .flatMap(k => Crossref2Oaf.convert(k.json)) + .flatMap(k => Crossref2Oaf.convert(k.json, vocabularies)) .filter(o => o != null) .write .mode(SaveMode.Overwrite) diff --git a/dhp-workflows/dhp-doiboost/src/test/java/eu/dnetlib/dhp/aggregation/AbstractVocabularyTest.java b/dhp-workflows/dhp-doiboost/src/test/java/eu/dnetlib/dhp/aggregation/AbstractVocabularyTest.java new file mode 100644 index 000000000..ee1ec95eb --- /dev/null +++ b/dhp-workflows/dhp-doiboost/src/test/java/eu/dnetlib/dhp/aggregation/AbstractVocabularyTest.java @@ -0,0 +1,51 @@ + +package eu.dnetlib.dhp.aggregation; + +import static org.mockito.Mockito.lenient; + +import java.io.IOException; +import java.util.Collections; +import java.util.List; +import java.util.Objects; + +import org.apache.commons.io.IOUtils; +import org.mockito.Mock; + +import eu.dnetlib.dhp.common.vocabulary.VocabularyGroup; +import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException; +import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService; + +public abstract class AbstractVocabularyTest { + + @Mock + protected ISLookUpService isLookUpService; + + protected VocabularyGroup vocabularies; + + public void setUpVocabulary() throws ISLookUpException, IOException { + lenient().when(isLookUpService.quickSearchProfile(VocabularyGroup.VOCABULARIES_XQUERY)).thenReturn(vocs()); + + lenient() + .when(isLookUpService.quickSearchProfile(VocabularyGroup.VOCABULARY_SYNONYMS_XQUERY)) + .thenReturn(synonyms()); + vocabularies = VocabularyGroup.loadVocsFromIS(isLookUpService); + } + + private static List vocs() throws IOException { + return IOUtils + .readLines( + Objects + .requireNonNull( + AbstractVocabularyTest.class.getResourceAsStream("/eu/dnetlib/dhp/doiboost/terms.txt"))); + } + + private static List synonyms() throws IOException { + return IOUtils + .readLines( + Objects + .requireNonNull( + AbstractVocabularyTest.class.getResourceAsStream("/eu/dnetlib/dhp/doiboost/synonyms.txt"))); + } + + +} diff --git a/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/dhp/doiboost/synonyms.txt b/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/dhp/doiboost/synonyms.txt new file mode 100644 index 000000000..e28dd2b41 --- /dev/null +++ b/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/dhp/doiboost/synonyms.txt @@ -0,0 +1,1500 @@ +dnet:access_modes @=@ CLOSED @=@ http://purl.org/coar/access_right/c_14cb +dnet:access_modes @=@ CLOSED @=@ info:eu-repo/semantics/closedAccess +dnet:access_modes @=@ EMBARGO @=@ http://purl.org/coar/access_right/c_f1cf +dnet:access_modes @=@ EMBARGO @=@ 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évalué par les pairs +dnet:review_levels @=@ 0001 @=@ Articolo valutato secondo i criteri della peer review +dnet:review_levels @=@ 0001 @=@ Articulo evaluado por dos pares +dnet:review_levels @=@ 0001 @=@ Articulo revisado por pares +dnet:review_levels @=@ 0001 @=@ Artigo Avaliado pelos Pares +dnet:review_levels @=@ 0001 @=@ Artigo Revisto por Pares +dnet:review_levels @=@ 0001 @=@ Artigo avaliado por blind peer review +dnet:review_levels @=@ 0001 @=@ Artigo avaliado por pares +dnet:review_levels @=@ 0001 @=@ Artigo de convidado. Avaliado pelos pares +dnet:review_levels @=@ 0001 @=@ Artigos; Avaliado pelos pares +dnet:review_levels @=@ 0001 @=@ Artículo de investigación, Investigaciones originales, Artículo evaluado por pares, Investigaciones empíricas +dnet:review_levels @=@ 0001 @=@ Artículo evaluado por pares +dnet:review_levels @=@ 0001 @=@ Artículo evaluado por pares, Ensayos de investigación +dnet:review_levels @=@ 0001 @=@ Artículo evaluado por pares, Investigaciones empíricas, Artículos de investigación +dnet:review_levels @=@ 0001 @=@ Artículo revisado +dnet:review_levels @=@ 0001 @=@ Artículo revisado por pares +dnet:review_levels @=@ 0001 @=@ Artículos de estudiantes, Artículo evaluado por pares, Artículos de investigación +dnet:review_levels @=@ 0001 @=@ Artículos de investigación evaluados por doble ciego +dnet:review_levels @=@ 0001 @=@ Artículos evaluadores por doble ciego +dnet:review_levels @=@ 0001 @=@ Artículos evaluados por pares +dnet:review_levels @=@ 0001 @=@ Artículos evaluados por pares académicos +dnet:review_levels @=@ 0001 @=@ Artículos revisados por pares +dnet:review_levels @=@ 0001 @=@ Avaliadas pelos pares +dnet:review_levels @=@ 0001 @=@ Avaliado anonimamente por pares +dnet:review_levels @=@ 0001 @=@ Avaliado em duplo cego por pares +dnet:review_levels @=@ 0001 @=@ Avaliado pela Editoria +dnet:review_levels @=@ 0001 @=@ Avaliado pela Editoria. Avaliado pelos pares. +dnet:review_levels @=@ 0001 @=@ Avaliado pelo Editoria +dnet:review_levels @=@ 0001 @=@ Avaliado pelo pares +dnet:review_levels @=@ 0001 @=@ Avaliado pelos Editores +dnet:review_levels @=@ 0001 @=@ Avaliado pelos pares +dnet:review_levels @=@ 0001 @=@ Avaliado pelos pares, Artigo de convidado +dnet:review_levels @=@ 0001 @=@ Avaliado pelos pares, Artigos Originais +dnet:review_levels @=@ 0001 @=@ Avaliado pelos pares, Artigos Originais, Artigos de Revisão +dnet:review_levels @=@ 0001 @=@ Avaliado pelos pares. Avaliado pelo Editoria +dnet:review_levels @=@ 0001 @=@ Avaliado po Pares +dnet:review_levels @=@ 0001 @=@ Avaliado por Editor +dnet:review_levels @=@ 0001 @=@ Avaliado por pares +dnet:review_levels @=@ 0001 @=@ Avaliados pelos pares +dnet:review_levels @=@ 0001 @=@ Avaliados por Pares +dnet:review_levels @=@ 0001 @=@ Blind Peer-reviewed Article +dnet:review_levels @=@ 0001 @=@ Book (peer-reviewed) +dnet:review_levels @=@ 0001 @=@ Comentario de libros, Comentario de revistas, Comentario de conferencias, Artículo evaluado por pares, Artículo de investigación +dnet:review_levels @=@ 0001 @=@ Conference paper; Peer-reviewed +dnet:review_levels @=@ 0001 @=@ Contribution to book (peer-reviewed) +dnet:review_levels @=@ 0001 @=@ Documento Avaliado por Pares +dnet:review_levels @=@ 0001 @=@ Double blind evaluation articles +dnet:review_levels @=@ 0001 @=@ Double blind peer review +dnet:review_levels @=@ 0001 @=@ Editors (peer-reviewed) +dnet:review_levels @=@ 0001 @=@ Evaluación por pares +dnet:review_levels @=@ 0001 @=@ Evaluado por pares +dnet:review_levels @=@ 0001 @=@ Evaluados por los pares +dnet:review_levels @=@ 0001 @=@ Hakem sürecinden geçmiş makale +dnet:review_levels @=@ 0001 @=@ Hakemli makale +dnet:review_levels @=@ 0001 @=@ Hakemlik Sürecinden Geçmiş +dnet:review_levels @=@ 0001 @=@ Invited Peer-Reviewed Article +dnet:review_levels @=@ 0001 @=@ Journal article; Peer-reviewed +dnet:review_levels @=@ 0001 @=@ Original article (peer-reviewed) +dnet:review_levels @=@ 0001 @=@ Other publication (peer-review) +dnet:review_levels @=@ 0001 @=@ Paper peer-reviewed +dnet:review_levels @=@ 0001 @=@ Papers evaluated by academic peers +dnet:review_levels @=@ 0001 @=@ Peer reviewed +dnet:review_levels @=@ 0001 @=@ Peer reviewed article +dnet:review_levels @=@ 0001 @=@ Peer reviewed invited commentry +dnet:review_levels @=@ 0001 @=@ Peer-Reviewed Protocol +dnet:review_levels @=@ 0001 @=@ Peer-reviewd Article +dnet:review_levels @=@ 0001 @=@ Peer-reviewed +dnet:review_levels @=@ 0001 @=@ Peer-reviewed Article +dnet:review_levels @=@ 0001 @=@ Peer-reviewed Paper +dnet:review_levels @=@ 0001 @=@ Peer-reviewed Review +dnet:review_levels @=@ 0001 @=@ Peer-reviewed Review Article +dnet:review_levels @=@ 0001 @=@ Peer-reviewed Text +dnet:review_levels @=@ 0001 @=@ Peer-reviewed communication +dnet:review_levels @=@ 0001 @=@ Peer-reviewed conference proceedings +dnet:review_levels @=@ 0001 @=@ Peer-reviewed research article +dnet:review_levels @=@ 0001 @=@ Peer-reviewed short communication +dnet:review_levels @=@ 0001 @=@ PeerReviewed +dnet:review_levels @=@ 0001 @=@ Proceedings (peer-reviewed) +dnet:review_levels @=@ 0001 @=@ Refereed +dnet:review_levels @=@ 0001 @=@ Refereed Article +dnet:review_levels @=@ 0001 @=@ Research articles evaluated by double blind +dnet:review_levels @=@ 0001 @=@ Resenha avaliada pelos pares +dnet:review_levels @=@ 0001 @=@ Review article (peer-reviewed) +dnet:review_levels @=@ 0001 @=@ Reviewed by peers +dnet:review_levels @=@ 0001 @=@ Revisión por Expertos +dnet:review_levels @=@ 0001 @=@ Revisto por Pares +dnet:review_levels @=@ 0001 @=@ SBBq abstracts / peer-reviewed +dnet:review_levels @=@ 0001 @=@ SBBq resúmenes - revisada por pares +dnet:review_levels @=@ 0001 @=@ Scholarly publ. Refereed +dnet:review_levels @=@ 0001 @=@ Scientific Publ (refereed) +dnet:review_levels @=@ 0001 @=@ Vertaisarvioimaton kirjoitus tieteellisessä aikakauslehdessä +dnet:review_levels @=@ 0001 @=@ Vertaisarvioitu alkuperäisartikkeli tieteellisessä aikakauslehdessä +dnet:review_levels @=@ 0001 @=@ Vertaisarvioitu artikkeli konferenssijulkaisussa +dnet:review_levels @=@ 0001 @=@ Vertaisarvioitu artikkeli tieteellisessä aikakauslehdessä +dnet:review_levels @=@ 0001 @=@ Vertaisarvioitu kirjan tai muun kokoomateoksen osa +dnet:review_levels @=@ 0001 @=@ Wetensch. publ. Refereed +dnet:review_levels @=@ 0001 @=@ article in peer-reviewed journal +dnet:review_levels @=@ 0001 @=@ articles validés +dnet:review_levels @=@ 0001 @=@ avaliado por pares, temas livres +dnet:review_levels @=@ 0001 @=@ info:eu-repo/semantics/peerReviewed +dnet:review_levels @=@ 0001 @=@ info:ulb-repo/semantics/articlePeerReview +dnet:review_levels @=@ 0001 @=@ proceeding with peer review +dnet:review_levels @=@ 0001 @=@ refereed_publications +dnet:review_levels @=@ 0001 @=@ ul_published_reviewed +dnet:review_levels @=@ 0001 @=@ Άρθρο που έχει αξιολογηθεί από ομότιμους ειδικούς +dnet:review_levels @=@ 0001 @=@ Άρθρο το οποίο έχει περάσει από ομότιμη αξιολόγηση +dnet:review_levels @=@ 0001 @=@ レフェリー付き論文 +dnet:review_levels @=@ 0001 @=@ 印刷物/電子媒体-テクニカルレポート類（査読有り） +dnet:review_levels @=@ 0001 @=@ 印刷物/電子媒体-会議発表論文（査読有り） +dnet:review_levels @=@ 0001 @=@ 印刷物/電子媒体-図書（査読有り） +dnet:review_levels @=@ 0001 @=@ 印刷物/電子媒体-学術雑誌論文（査読有り） +dnet:review_levels @=@ 0001 @=@ 印刷物/電子媒体-紀要論文（査読有り） +dnet:review_levels @=@ 0001 @=@ 印刷物/電子媒体-雑誌記事（査読有り） +dnet:review_levels @=@ 0001 @=@ 原著論文（査読有り） +dnet:review_levels @=@ 0001 @=@ 査読論文 +cnr:institutes @=@ https://ror.org/00brf2d87 @=@ CDS001 +cnr:institutes @=@ https://ror.org/00brf2d87 @=@ IDASC - Istituto di Acustica e Sensoristica \"Orso Mario Corbino\" +cnr:institutes @=@ https://ror.org/006qkqr45 @=@ CDS002 +cnr:institutes @=@ https://ror.org/006qkqr45 @=@ IAMC - Istituto per l'ambiente marino costiero +cnr:institutes @=@ https://ror.org/054ye0e45 @=@ CDS003 +cnr:institutes @=@ https://ror.org/054ye0e45 @=@ IASI - Istituto di analisi dei sistemi ed informatica \"Antonio Ruberti\" +cnr:institutes @=@ https://ror.org/00ygy3d85 @=@ CDS004 +cnr:institutes @=@ https://ror.org/00ygy3d85 @=@ IAC - Istituto per le applicazioni del calcolo \"Mauro Picone\" +cnr:institutes @=@ https://ror.org/000sy1f36 @=@ CDS005 +cnr:institutes @=@ https://ror.org/000sy1f36 @=@ IASF - Istituto di astrofisica spaziale e fisica cosmica +cnr:institutes @=@ https://ror.org/00x5wpm25 @=@ CDS006 +cnr:institutes @=@ https://ror.org/00x5wpm25 @=@ IBAM - Istituto per i beni archeologici e monumentali +cnr:institutes @=@ https://ror.org/03eqeqg74 @=@ CDS007 +cnr:institutes @=@ https://ror.org/03eqeqg74 @=@ IBP - Istituto di biochimica delle proteine +cnr:institutes @=@ https://ror.org/041xzk838 @=@ CDS008 +cnr:institutes @=@ https://ror.org/041xzk838 @=@ IBF - Istituto di biofisica +cnr:institutes @=@ https://ror.org/00s2j5046 @=@ CDS009 +cnr:institutes @=@ https://ror.org/00s2j5046 @=@ IBFM - Istituto di bioimmagini e fisiologia molecolare +cnr:institutes @=@ __CDS010__ @=@ CDS010 +cnr:institutes @=@ __CDS010__ @=@ IBAF - Istituto di biologia agro-ambientale e forestale +cnr:institutes @=@ __CDS011__ @=@ CDS011 +cnr:institutes @=@ __CDS011__ @=@ IBC - Istituto di biologia cellulare +cnr:institutes @=@ https://ror.org/02e5sbe24 @=@ CDS012 +cnr:institutes @=@ https://ror.org/02e5sbe24 @=@ IBBA - Istituto di biologia e biotecnologia agraria +cnr:institutes @=@ https://ror.org/01nyatq71 @=@ CDS013 +cnr:institutes @=@ https://ror.org/01nyatq71 @=@ IBPM - Istituto di biologia e patologia molecolari +cnr:institutes @=@ https://ror.org/01dy2q607 @=@ CDS014 +cnr:institutes @=@ https://ror.org/01dy2q607 @=@ IBIM - Istituto di biomedicina e di immunologia molecolare \"Alberto Monroy\" +cnr:institutes @=@ https://ror.org/05nzf7q96 @=@ CDS015 +cnr:institutes @=@ https://ror.org/05nzf7q96 @=@ IBIOM - Istituto di Biomembrane, Bioenergetica e Biotecnologie Molecolari +cnr:institutes @=@ https://ror.org/05m1yqp60 @=@ CDS016 +cnr:institutes @=@ https://ror.org/05m1yqp60 @=@ IBIMET - Istituto di biometeorologia +cnr:institutes @=@ https://ror.org/03rqtqb02 @=@ CDS017 +cnr:institutes @=@ https://ror.org/03rqtqb02 @=@ IBB - Istituto di biostrutture e bioimmagini +cnr:institutes @=@ https://ror.org/04r5fge26 @=@ CDS018 +cnr:institutes @=@ https://ror.org/04r5fge26 @=@ ICAR - Istituto di calcolo e reti ad alte prestazioni +cnr:institutes @=@ https://ror.org/03wyf0g15 @=@ CDS019 +cnr:institutes @=@ https://ror.org/03wyf0g15 @=@ ICB - Istituto di chimica biomolecolare +cnr:institutes @=@ https://ror.org/02fkw1114 @=@ CDS020 +cnr:institutes @=@ https://ror.org/02fkw1114 @=@ ICCOM - Istituto di chimica dei composti organo metallici +cnr:institutes @=@ https://ror.org/0141vn777 @=@ CDS021 +cnr:institutes @=@ https://ror.org/0141vn777 @=@ ICRM - Istituto di chimica del riconoscimento molecolare +cnr:institutes @=@ __CDS022__ @=@ CDS022 +cnr:institutes @=@ __CDS022__ @=@ ICTP - Istituto di chimica e tecnologia dei polimeri +cnr:institutes @=@ __CDS023__ @=@ CDS023 +cnr:institutes @=@ __CDS023__ @=@ ICIS - Istituto di chimica inorganica e delle superfici +cnr:institutes @=@ https://ror.org/00be3zh53 @=@ CDS024 +cnr:institutes @=@ https://ror.org/00be3zh53 @=@ ISASI - Istituto di Scienze Applicate e Sistemi Intelligenti \"Eduardo Caianiello\" +cnr:institutes @=@ __CDS025__ @=@ CDS025 +cnr:institutes @=@ __CDS025__ @=@ ICEVO - Istituto di Studi sulle Civiltà dell'Egeo e del Vicino Oriente +cnr:institutes @=@ https://ror.org/02ynrme92 @=@ CDS026 +cnr:institutes @=@ https://ror.org/02ynrme92 @=@ ICVBC - Istituto per la conservazione e valorizzazione dei beni culturali +cnr:institutes @=@ https://ror.org/05wba8r86 @=@ CDS027 +cnr:institutes @=@ https://ror.org/05wba8r86 @=@ IC - Istituto di cristallografia +cnr:institutes @=@ https://ror.org/03z58xd74 @=@ CDS028 +cnr:institutes @=@ https://ror.org/03z58xd74 @=@ IDPA - Istituto per la dinamica dei processi ambientali +cnr:institutes @=@ https://ror.org/00n4jbh84 @=@ CDS029 +cnr:institutes @=@ https://ror.org/00n4jbh84 @=@ IEIIT - Istituto di elettronica e di ingegneria dell'informazione e delle telecomunicazioni +cnr:institutes @=@ https://ror.org/04sn06036 @=@ CDS030 +cnr:institutes @=@ https://ror.org/04sn06036 @=@ IEOS - Istituto per l'endocrinologia e l'oncologia \"Gaetano Salvatore\" +cnr:institutes @=@ https://ror.org/01rg40y89 @=@ CDS031 +cnr:institutes @=@ https://ror.org/01rg40y89 @=@ ICMATE - Istituto di Chimica della Materia Condensata e di Tecnologie per l'Energia +cnr:institutes @=@ https://ror.org/00dqega85 @=@ CDS032 +cnr:institutes @=@ https://ror.org/00dqega85 @=@ IFAC - Istituto di fisica applicata \"Nello Carrara\" +cnr:institutes @=@ https://ror.org/02n2bgz18 @=@ CDS033 +cnr:institutes @=@ https://ror.org/02n2bgz18 @=@ IFP - Istituto di fisica del plasma \"Piero Caldirola\" +cnr:institutes @=@ __CDS034__ @=@ CDS034 +cnr:institutes @=@ __CDS034__ @=@ IFSI - Istituto di fisica dello spazio interplanetario +cnr:institutes @=@ https://ror.org/01kdj2848 @=@ CDS035 +cnr:institutes @=@ https://ror.org/01kdj2848 @=@ IFC - Istituto di fisiologia clinica +cnr:institutes @=@ https://ror.org/049ebw417 @=@ CDS036 +cnr:institutes @=@ https://ror.org/049ebw417 @=@ IFN - Istituto di fotonica e nanotecnologie +cnr:institutes @=@ https://ror.org/01f5tnx94 @=@ CDS037 +cnr:institutes @=@ https://ror.org/01f5tnx94 @=@ IGI - Istituto gas ionizzati +cnr:institutes @=@ __CDS038__ @=@ CDS038 +cnr:institutes @=@ __CDS038__ @=@ IGP - Istituto di genetica delle popolazioni +cnr:institutes @=@ https://ror.org/04hadk112 @=@ CDS039 +cnr:institutes @=@ https://ror.org/04hadk112 @=@ IGB - Istituto di genetica e biofisica \"Adriano Buzzati Traverso\" +cnr:institutes @=@ https://ror.org/03qpd8w66 @=@ CDS040 +cnr:institutes @=@ https://ror.org/03qpd8w66 @=@ IGM - Istituto di genetica molecolare \"Luigi Luca Cavalli Sforza\" +cnr:institutes @=@ https://ror.org/01gtsa866 @=@ CDS041 +cnr:institutes @=@ https://ror.org/01gtsa866 @=@ IBBR - Istituto di Bioscienze e Biorisorse +cnr:institutes @=@ https://ror.org/00ytw6m58 @=@ CDS042 +cnr:institutes @=@ https://ror.org/00ytw6m58 @=@ IGAG - Istituto di geologia ambientale e geoingegneria +cnr:institutes @=@ https://ror.org/015bmra78 @=@ CDS043 +cnr:institutes @=@ https://ror.org/015bmra78 @=@ IGG - Istituto di geoscienze e georisorse +cnr:institutes @=@ https://ror.org/02gdcn153 @=@ CDS044 +cnr:institutes @=@ https://ror.org/02gdcn153 @=@ IIT - Istituto di informatica e telematica +cnr:institutes @=@ __CDS045__ @=@ CDS045 +cnr:institutes @=@ __CDS045__ @=@ ISIB - Istituto di ingegneria biomedica +cnr:institutes @=@ https://ror.org/05hky6p02 @=@ CDS046 +cnr:institutes @=@ https://ror.org/05hky6p02 @=@ IIA - Istituto sull'inquinamento atmosferico +cnr:institutes @=@ https://ror.org/011n2hw53 @=@ CDS047 +cnr:institutes @=@ https://ror.org/011n2hw53 @=@ ILIESI - Istituto per il lessico intellettuale europeo e storia delle idee +cnr:institutes @=@ https://ror.org/028g3pe33 @=@ CDS048 +cnr:institutes @=@ https://ror.org/028g3pe33 @=@ ILC - Istituto di linguistica computazionale \"Antonio Zampolli\" +cnr:institutes @=@ __CDS049__ @=@ CDS049 +cnr:institutes @=@ __CDS049__ @=@ IMAMOTER - Istituto per le macchine agricole e movimento terra +cnr:institutes @=@ https://ror.org/03m0n3c07 @=@ CDS050 +cnr:institutes @=@ https://ror.org/03m0n3c07 @=@ IMATI - Istituto di matematica applicata e tecnologie informatiche \"Enrico Magenes\" +cnr:institutes @=@ __CDS051__ @=@ CDS051 +cnr:institutes @=@ __CDS051__ @=@ IMCB - Istituto per i materiali compositi e biomedici +cnr:institutes @=@ https://ror.org/00z8ws214 @=@ CDS052 +cnr:institutes @=@ https://ror.org/00z8ws214 @=@ IMEM - Istituto dei materiali per l'elettronica ed il magnetismo +cnr:institutes @=@ __CDS053__ @=@ CDS053 +cnr:institutes @=@ __CDS053__ @=@ ISB - Istituto per i Sistemi Biologici +cnr:institutes @=@ https://ror.org/00bc51d88 @=@ CDS054 +cnr:institutes @=@ https://ror.org/00bc51d88 @=@ NANOTEC - Istituto di Nanotecnologia +cnr:institutes @=@ https://ror.org/024ye7w89 @=@ CDS055 +cnr:institutes @=@ https://ror.org/024ye7w89 @=@ IMAA - Istituto di metodologie per l'analisi ambientale +cnr:institutes @=@ __CDS056__ @=@ CDS056 +cnr:institutes @=@ __CDS056__ @=@ IMGC - Istituto di metrologia \"Gustavo Colonnetti\" +cnr:institutes @=@ https://ror.org/05vk2g845 @=@ CDS057 +cnr:institutes @=@ https://ror.org/05vk2g845 @=@ IMM - Istituto per la microelettronica e microsistemi +cnr:institutes @=@ https://ror.org/02qwy8e97 @=@ CDS058 +cnr:institutes @=@ https://ror.org/02qwy8e97 @=@ IM - Istituto motori +cnr:institutes @=@ __CDS059__ @=@ CDS059 +cnr:institutes @=@ __CDS059__ @=@ INMM - Istituto di neurobiologia e medicina molecolare +cnr:institutes @=@ https://ror.org/02dr63s31 @=@ CDS060 +cnr:institutes @=@ https://ror.org/02dr63s31 @=@ IRGB - Istituto di Ricerca Genetica e Biomedica +cnr:institutes @=@ https://ror.org/0240rwx68 @=@ CDS061 +cnr:institutes @=@ https://ror.org/0240rwx68 @=@ IN - Istituto di neuroscienze +cnr:institutes @=@ https://ror.org/02rzxrg25 @=@ CDS062 +cnr:institutes @=@ https://ror.org/02rzxrg25 @=@ OVI - Istituto opera del vocabolario italiano +cnr:institutes @=@ https://ror.org/05patmk97 @=@ CDS063 +cnr:institutes @=@ https://ror.org/05patmk97 @=@ IPCF - Istituto per i processi chimico-fisici +cnr:institutes @=@ __CDS064__ @=@ CDS064 +cnr:institutes @=@ __CDS064__ @=@ IPP - Istituto per la protezione delle piante +cnr:institutes @=@ https://ror.org/029st3z03 @=@ CDS065 +cnr:institutes @=@ https://ror.org/029st3z03 @=@ IRA - Istituto di radioastronomia +cnr:institutes @=@ https://ror.org/0040zx077 @=@ CDS066 +cnr:institutes @=@ https://ror.org/0040zx077 @=@ IRPI - Istituto di ricerca per la protezione idrogeologica +cnr:institutes @=@ https://ror.org/044bfsy89 @=@ CDS067 +cnr:institutes @=@ https://ror.org/044bfsy89 @=@ IRCRES - Istituto di Ricerca sulla Crescita Economica Sostenibile +cnr:institutes @=@ https://ror.org/01n1ayq61 @=@ CDS068 +cnr:institutes @=@ https://ror.org/01n1ayq61 @=@ IRPPS - Istituto di ricerche sulla popolazione e le politiche sociali +cnr:institutes @=@ https://ror.org/02db0kh50 @=@ CDS069 +cnr:institutes @=@ https://ror.org/02db0kh50 @=@ IRSA - Istituto di ricerca sulle acque +cnr:institutes @=@ https://ror.org/05813wx75 @=@ CDS070 +cnr:institutes @=@ https://ror.org/05813wx75 @=@ IRC - Istituto di ricerche sulla combustione +cnr:institutes @=@ https://ror.org/04vnwke91 @=@ CDS071 +cnr:institutes @=@ https://ror.org/04vnwke91 @=@ IRISS - Istituto di Ricerca su Innovazione e Servizi per lo Sviluppo +cnr:institutes @=@ https://ror.org/02wxw4x45 @=@ CDS072 +cnr:institutes @=@ https://ror.org/02wxw4x45 @=@ IREA - Istituto per il rilevamento elettromagnetico dell'ambiente +cnr:institutes @=@ https://ror.org/01j6drw72 @=@ CDS073 +cnr:institutes @=@ https://ror.org/01j6drw72 @=@ ISTEC - Istituto di scienza e tecnologia dei materiali ceramici +cnr:institutes @=@ https://ror.org/05kacka20 @=@ CDS074 +cnr:institutes @=@ https://ror.org/05kacka20 @=@ ISTI - Istituto di scienza e tecnologie dell'informazione \"Alessandro Faedo\" +cnr:institutes @=@ https://ror.org/00n8ttd98 @=@ CDS075 +cnr:institutes @=@ https://ror.org/00n8ttd98 @=@ ISAC - Istituto di scienze dell'atmosfera e del clima +cnr:institutes @=@ https://ror.org/0013zhk30 @=@ CDS076 +cnr:institutes @=@ https://ror.org/0013zhk30 @=@ ISA - Istituto di Scienze dell'Alimentazione +cnr:institutes @=@ https://ror.org/03x7xkr71 @=@ CDS077 +cnr:institutes @=@ https://ror.org/03x7xkr71 @=@ ISPA - Istituto di scienze delle produzioni alimentari +cnr:institutes @=@ https://ror.org/05w9g2j85 @=@ CDS078 +cnr:institutes @=@ https://ror.org/05w9g2j85 @=@ ISTC - Istituto di scienze e tecnologie della cognizione +cnr:institutes @=@ https://ror.org/032tyv240 @=@ CDS079 +cnr:institutes @=@ https://ror.org/032tyv240 @=@ ISTM - Istituto di scienze e tecnologie molecolari +cnr:institutes @=@ https://ror.org/02hdf6119 @=@ CDS080 +cnr:institutes @=@ https://ror.org/02hdf6119 @=@ ISMAR - Istituto di scienze marine +cnr:institutes @=@ https://ror.org/01yg57d71 @=@ CDS081 +cnr:institutes @=@ https://ror.org/01yg57d71 @=@ ISN - Istituto di scienze neurologiche +cnr:institutes @=@ https://ror.org/021z1mz76 @=@ CDS082 +cnr:institutes @=@ https://ror.org/021z1mz76 @=@ ISOF - Istituto per la sintesi organica e la fotoreattività +cnr:institutes @=@ https://ror.org/01wqae691 @=@ CDS083 +cnr:institutes @=@ https://ror.org/01wqae691 @=@ ISPAAM - Istituto per il sistema produzione animale in ambiente Mediterraneo +cnr:institutes @=@ __CDS084__ @=@ CDS084 +cnr:institutes @=@ __CDS084__ @=@ ISAFoM - Istituto per i sistemi agricoli e forestali del mediterraneo +cnr:institutes @=@ https://ror.org/00awwz417 @=@ CDS085 +cnr:institutes @=@ https://ror.org/00awwz417 @=@ ISPF - Istituto per la storia del pensiero filosofico e scientifico moderno +cnr:institutes @=@ https://ror.org/03a111314 @=@ CDS086 +cnr:institutes @=@ https://ror.org/03a111314 @=@ ISEM - Istituto di storia dell'Europa mediterranea +cnr:institutes @=@ https://ror.org/01zz9wh30 @=@ CDS087 +cnr:institutes @=@ https://ror.org/01zz9wh30 @=@ ISM - Istituto di struttura della materia +cnr:institutes @=@ https://ror.org/035y5td47 @=@ CDS088 +cnr:institutes @=@ https://ror.org/035y5td47 @=@ ISGI - Istituto di studi giuridici internazionali +cnr:institutes @=@ __CDS089__ @=@ CDS089 +cnr:institutes @=@ __CDS089__ @=@ ISPRI - Istituto sperimentale di studi socio - economici sull'innovazione e le politiche della ricerca +cnr:institutes @=@ https://ror.org/051t1q308 @=@ CDS090 +cnr:institutes @=@ https://ror.org/051t1q308 @=@ ISSIA - Istituto di studi sui sistemi intelligenti per l'automazione +cnr:institutes @=@ https://ror.org/05k3cs357 @=@ CDS091 +cnr:institutes @=@ https://ror.org/05k3cs357 @=@ ISSIRFA - Istituto di studi sui sistemi regionali federali e sulle autonomie \"Massimo Severo Giannini\" +cnr:institutes @=@ https://ror.org/02gcxw165 @=@ CDS092 +cnr:institutes @=@ https://ror.org/02gcxw165 @=@ ISMA - Istituto di Studi sul Mediterraneo Antico +cnr:institutes @=@ https://ror.org/05db0es39 @=@ CDS093 +cnr:institutes @=@ https://ror.org/05db0es39 @=@ ISMed - Istituto di studi sul Mediterraneo +cnr:institutes @=@ https://ror.org/029k6t707 @=@ CDS094 +cnr:institutes @=@ https://ror.org/029k6t707 @=@ ISE - Istituto per lo studio degli ecosistemi +cnr:institutes @=@ https://ror.org/00w6r1881 @=@ CDS095 +cnr:institutes @=@ https://ror.org/00w6r1881 @=@ ISMN - Istituto per lo studio dei materiali nanostrutturati +cnr:institutes @=@ https://ror.org/01mfmr054 @=@ CDS096 +cnr:institutes @=@ https://ror.org/01mfmr054 @=@ ISMAC - Istituto per lo studio delle macromolecole +cnr:institutes @=@ https://ror.org/058nrs650 @=@ CDS097 +cnr:institutes @=@ https://ror.org/058nrs650 @=@ ITM - Istituto per la tecnologia delle membrane +cnr:institutes @=@ https://ror.org/0331xj092 @=@ CDS098 +cnr:institutes @=@ https://ror.org/0331xj092 @=@ ITABC - Istituto per le tecnologie applicate ai beni culturali +cnr:institutes @=@ https://ror.org/052q58629 @=@ CDS099 +cnr:institutes @=@ https://ror.org/052q58629 @=@ ITAE - Istituto di tecnologie avanzate per l'energia \"Nicola Giordano\" +cnr:institutes @=@ https://ror.org/04ehykb85 @=@ CDS100 +cnr:institutes @=@ https://ror.org/04ehykb85 @=@ ITB - Istituto di tecnologie biomediche +cnr:institutes @=@ https://ror.org/0221agg28 @=@ CDS101 +cnr:institutes @=@ https://ror.org/0221agg28 @=@ ITC - Istituto per le tecnologie della costruzione +cnr:institutes @=@ https://ror.org/02xz4xc25 @=@ CDS102 +cnr:institutes @=@ https://ror.org/02xz4xc25 @=@ ITD - Istituto per le tecnologie didattiche +cnr:institutes @=@ __CDS103__ @=@ CDS103 +cnr:institutes @=@ __CDS103__ @=@ STIIMA - Istituto di Sistemi e Tecnologie Industriali Intelligenti per il Manifatturiero Avanzato +cnr:institutes @=@ https://ror.org/01as2bh37 @=@ CDS104 +cnr:institutes @=@ https://ror.org/01as2bh37 @=@ ITTIG - Istituto di teoria e tecniche dell'informazione giuridica +cnr:institutes @=@ https://ror.org/01y5w6t76 @=@ CDS105 +cnr:institutes @=@ https://ror.org/01y5w6t76 @=@ ITOI - Istituto per i trapianti d'organo e immunocitologia +cnr:institutes @=@ https://ror.org/04xy2mq71 @=@ CDS106 +cnr:institutes @=@ https://ror.org/04xy2mq71 @=@ IVALSA - Istituto per la valorizzazione del legno e delle specie arboree +cnr:institutes @=@ __CDS107__ @=@ CDS107 +cnr:institutes @=@ __CDS107__ @=@ IVV - Istituto di virologia vegetale +cnr:institutes @=@ https://ror.org/013nxtf56 @=@ CDS108 +cnr:institutes @=@ https://ror.org/013nxtf56 @=@ IRSIG - Istituto di ricerca sui sistemi giudiziari +cnr:institutes @=@ https://ror.org/05rcgef49 @=@ CDS109 +cnr:institutes @=@ https://ror.org/05rcgef49 @=@ ISC - Istituto dei sistemi complessi +cnr:institutes @=@ __CDS110__ @=@ CDS110 +cnr:institutes @=@ __CDS110__ @=@ INFM - Centro di responsabilità scientifica INFM +cnr:institutes @=@ https://ror.org/02dp3a879 @=@ CDS111 +cnr:institutes @=@ https://ror.org/02dp3a879 @=@ INO - Istituto nazionale di ottica +cnr:institutes @=@ __CDS112__ @=@ CDS112 +cnr:institutes @=@ __CDS112__ @=@ IDAIC - Centro di responsabilità di attività scientifica IDAIC +cnr:institutes @=@ https://ror.org/00p03yg71 @=@ CDS113 +cnr:institutes @=@ https://ror.org/00p03yg71 @=@ SPIN - Istituto superconduttori, materiali innovativi e dispositivi +cnr:institutes @=@ https://ror.org/00yfw2296 @=@ CDS114 +cnr:institutes @=@ https://ror.org/00yfw2296 @=@ IOM - Istituto officina dei materiali +cnr:institutes @=@ https://ror.org/0042e5975 @=@ CDS115 +cnr:institutes @=@ https://ror.org/0042e5975 @=@ NANO - Istituto Nanoscienze +cnr:institutes @=@ https://ror.org/03ta8pf33 @=@ CDS116 +cnr:institutes @=@ https://ror.org/03ta8pf33 @=@ IFT - Istituto di Farmacologia Traslazionale +cnr:institutes @=@ https://ror.org/040xhth73 @=@ CDS117 +cnr:institutes @=@ https://ror.org/040xhth73 @=@ IBCN - Istituto di Biologia Cellulare e Neurobiologia +cnr:institutes @=@ https://ror.org/02qnx8e75 @=@ CDS118 +cnr:institutes @=@ https://ror.org/02qnx8e75 @=@ INM - Istituto di iNgegneria del Mare +cnr:institutes @=@ https://ror.org/05nr7xa08 @=@ CDS119 +cnr:institutes @=@ https://ror.org/05nr7xa08 @=@ IPCB - Istituto per i Polimeri, Compositi e Biomateriali +cnr:institutes @=@ https://ror.org/008fjbg42 @=@ CDS121 +cnr:institutes @=@ https://ror.org/008fjbg42 @=@ IPSP - Istituto per la Protezione Sostenibile delle Piante +cnr:institutes @=@ __CDS122__ @=@ CDS122 +cnr:institutes @=@ __CDS122__ @=@ IRBIM - Istituto per le Risorse Biologiche e le Biotecnologie Marine +cnr:institutes @=@ __CDS123__ @=@ CDS123 +cnr:institutes @=@ __CDS123__ @=@ ISPC - Istituto di Scienze del Patrimonio Culturale +cnr:institutes @=@ __CDS124__ @=@ CDS124 +cnr:institutes @=@ __CDS124__ @=@ IAS - Istituto per lo studio degli impatti Antropici e Sostenibilità in ambiente marino +cnr:institutes @=@ __CDS125__ @=@ CDS125 +cnr:institutes @=@ __CDS125__ @=@ IRET - Istituto di Ricerca sugli Ecosistemi Terrestri +cnr:institutes @=@ https://ror.org/03a0vt050 @=@ CDS126 +cnr:institutes @=@ https://ror.org/03a0vt050 @=@ ISTP - Istituto per la Scienza e Tecnologia dei Plasmi +cnr:institutes @=@ __CDS127__ @=@ CDS127 +cnr:institutes @=@ __CDS127__ @=@ ISP - Istituto di Scienze Polari +cnr:institutes @=@ https://ror.org/03byxpq91 @=@ CDS128 +cnr:institutes @=@ https://ror.org/03byxpq91 @=@ IRIB - Istituto per la Ricerca e l'Innovazione Biomedica +cnr:institutes @=@ __CDS129__ @=@ CDS129 +cnr:institutes @=@ __CDS129__ @=@ IGSG - Istituto di Informatica Giuridica e Sistemi Giudiziari +cnr:institutes @=@ __CDS130__ @=@ CDS130 +cnr:institutes @=@ __CDS130__ @=@ IBBC - Istituto di Biochimica e Biologia Cellulare +cnr:institutes @=@ __CDS131__ @=@ CDS131 +cnr:institutes @=@ __CDS131__ @=@ IBE - Istituto per la BioEconomia +cnr:institutes @=@ https://ror.org/0263zy895 @=@ CDS132 +cnr:institutes @=@ https://ror.org/0263zy895 @=@ SCITEC - Istituto di Scienze e Tecnologie Chimiche \"Giulio Natta\" +cnr:institutes @=@ __CDS133__ @=@ CDS133 +cnr:institutes @=@ __CDS133__ @=@ STEMS - Istituto di Scienze e Tecnologie per l'Energia e la Mobilità Sostenibili \ No newline at end of file diff --git a/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/dhp/doiboost/terms.txt b/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/dhp/doiboost/terms.txt new file mode 100644 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+cnr:institutes @=@ cnr:institutes @=@ __CDS130__ @=@ __CDS130__ +cnr:institutes @=@ cnr:institutes @=@ __CDS131__ @=@ __CDS131__ +cnr:institutes @=@ cnr:institutes @=@ https://ror.org/0263zy895 @=@ https://ror.org/0263zy895 +cnr:institutes @=@ cnr:institutes @=@ __CDS133__ @=@ __CDS133__ + diff --git a/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/doiboost/crossref/preprint.json b/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/doiboost/crossref/preprint.json index 13b2fea84..53090c057 100644 --- a/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/doiboost/crossref/preprint.json +++ b/dhp-workflows/dhp-doiboost/src/test/resources/eu/dnetlib/doiboost/crossref/preprint.json @@ -57,7 +57,7 @@ ] ] }, - "type": "posted-content", + "type": "journal-article", "URL": "http://dx.doi.org/10.1101/030080", "is-referenced-by-count": 2, "link": [ diff --git a/dhp-workflows/dhp-doiboost/src/test/scala/eu/dnetlib/dhp/doiboost/crossref/CrossrefMappingTest.scala b/dhp-workflows/dhp-doiboost/src/test/scala/eu/dnetlib/dhp/doiboost/crossref/CrossrefMappingTest.scala index 9bf1e1f53..5835b5aea 100644 --- a/dhp-workflows/dhp-doiboost/src/test/scala/eu/dnetlib/dhp/doiboost/crossref/CrossrefMappingTest.scala +++ b/dhp-workflows/dhp-doiboost/src/test/scala/eu/dnetlib/dhp/doiboost/crossref/CrossrefMappingTest.scala @@ -1,37 +1,43 @@ package eu.dnetlib.dhp.doiboost.crossref +import com.fasterxml.jackson.databind.SerializationFeature +import eu.dnetlib.dhp.aggregation.AbstractVocabularyTest import eu.dnetlib.dhp.schema.common.ModelConstants import eu.dnetlib.dhp.schema.oaf._ import eu.dnetlib.dhp.utils.DHPUtils import eu.dnetlib.doiboost.crossref.Crossref2Oaf -import org.codehaus.jackson.map.{ObjectMapper, SerializationConfig} import org.json4s +import com.fasterxml.jackson.databind.ObjectMapper import org.json4s.JsonAST.{JField, JObject, JString} import org.json4s.{DefaultFormats, JValue} import org.json4s.jackson.JsonMethods import org.junit.jupiter.api.Assertions._ -import org.junit.jupiter.api.Test +import org.junit.jupiter.api.extension.ExtendWith +import org.junit.jupiter.api.{BeforeEach, Test} +import org.mockito.junit.jupiter.MockitoExtension import org.slf4j.{Logger, LoggerFactory} +import java.nio.file.Files import scala.collection.JavaConverters._ import scala.io.Source import scala.util.matching.Regex -class CrossrefMappingTest { +@ExtendWith(Array(classOf[MockitoExtension])) +class CrossrefMappingTest extends AbstractVocabularyTest{ val logger: Logger = LoggerFactory.getLogger(Crossref2Oaf.getClass) val mapper = new ObjectMapper() + @BeforeEach + def setUp(): Unit = { + super.setUpVocabulary() + } + @Test - def testMissingAuthorParser(): Unit = { - val json: String = Source - .fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/s41567-022-01757-y.json")) - .mkString - val result = Crossref2Oaf.convert(json) - result - .filter(o => o.isInstanceOf[Publication]) - .map(p => p.asInstanceOf[Publication]) - .foreach(p => assertTrue(p.getAuthor.size() > 0)) + def testMissingAuthorParser():Unit = { + val json: String = Source.fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/s41567-022-01757-y.json")).mkString + val result = Crossref2Oaf.convert(json, vocabularies) + result.filter(o => o.isInstanceOf[Publication]).map(p=> p.asInstanceOf[Publication]).foreach(p =>assertTrue(p.getAuthor.size()>0)) } @Test @@ -50,13 +56,13 @@ class CrossrefMappingTest { for (line <- funder_doi.linesWithSeparators.map(l => l.stripLineEnd)) { val json = template.replace("%s", line) - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) checkRelation(resultList) } for (line <- funder_name.linesWithSeparators.map(l => l.stripLineEnd)) { val json = template.replace("%s", line) - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) checkRelation(resultList) } @@ -96,7 +102,7 @@ class CrossrefMappingTest { Source.fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/issue_date.json")).mkString assertNotNull(json) assertFalse(json.isEmpty) - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) val items = resultList.filter(p => p.isInstanceOf[Result]) @@ -115,14 +121,14 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty) - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) val items = resultList.filter(p => p.isInstanceOf[Result]) - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) - items.foreach(p => println(mapper.writeValueAsString(p))) + + items.foreach(p => println(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(p))) } @@ -142,7 +148,7 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty) - val result: List[Oaf] = Crossref2Oaf.convert(json) + val result: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(result.nonEmpty) @@ -163,8 +169,8 @@ class CrossrefMappingTest { assertEquals(doisReference.size, relationList.size) - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) - relationList.foreach(p => println(mapper.writeValueAsString(p))) + + relationList.foreach(p => println(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(p))) } @Test @@ -178,14 +184,14 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) val items = resultList.filter(p => p.isInstanceOf[Result]) - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) - items.foreach(p => println(mapper.writeValueAsString(p))) + + items.foreach(p => println(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(p))) } @@ -194,18 +200,17 @@ class CrossrefMappingTest { val json = Source .fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/prwTest.json")) .mkString - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) assertNotNull(json) assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) val items = resultList.filter(p => p.isInstanceOf[Result]) - items.foreach(p => logger.info(mapper.writeValueAsString(p))) + items.foreach(p => logger.info(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(p))) } @@ -235,7 +240,7 @@ class CrossrefMappingTest { assertFalse(json.isEmpty) - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) val rels: List[Relation] = @@ -255,7 +260,7 @@ class CrossrefMappingTest { assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -266,7 +271,7 @@ class CrossrefMappingTest { val result: Result = items.head.asInstanceOf[Result] assertNotNull(result) - logger.info(mapper.writeValueAsString(result)); + logger.info(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(result)); assertNotNull(result.getDataInfo, "Datainfo test not null Failed"); assertNotNull( @@ -331,7 +336,7 @@ class CrossrefMappingTest { assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -415,7 +420,7 @@ class CrossrefMappingTest { assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -463,7 +468,7 @@ class CrossrefMappingTest { assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -542,7 +547,7 @@ class CrossrefMappingTest { assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -568,7 +573,7 @@ class CrossrefMappingTest { assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -578,7 +583,8 @@ class CrossrefMappingTest { assert(items.size == 1) val result: Result = items.head.asInstanceOf[Publication] assertNotNull(result) - logger.info(mapper.writeValueAsString(result)); + + logger.info(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(result)); } @Test @@ -591,7 +597,7 @@ class CrossrefMappingTest { val line: String = "\"funder\": [{\"name\": \"Wellcome Trust Masters Fellowship\",\"award\": [\"090633\"]}]," val json = template.replace("%s", line) - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) val items = resultList.filter(p => p.isInstanceOf[Publication]) val result: Result = items.head.asInstanceOf[Publication] @@ -610,7 +616,7 @@ class CrossrefMappingTest { .fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/article.json")) .mkString - val resultList: List[Oaf] = Crossref2Oaf.convert(template) + val resultList: List[Oaf] = Crossref2Oaf.convert(template, vocabularies) assertTrue(resultList.nonEmpty) val items = resultList.filter(p => p.isInstanceOf[Publication]) val result: Result = items.head.asInstanceOf[Publication] @@ -634,14 +640,14 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) val item: Result = resultList.filter(p => p.isInstanceOf[Result]).head.asInstanceOf[Result] - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) - println(mapper.writeValueAsString(item)) + + println(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(item)) assertTrue( item.getInstance().asScala exists (i => i.getLicense.getValue.equals("https://www.springer.com/vor")) @@ -664,7 +670,7 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -681,8 +687,8 @@ class CrossrefMappingTest { assertTrue( item.getInstance().asScala exists (i => i.getAccessright.getOpenAccessRoute == OpenAccessRoute.hybrid) ) - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) - println(mapper.writeValueAsString(item)) + + println(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(item)) } @@ -699,7 +705,7 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -716,8 +722,7 @@ class CrossrefMappingTest { assertTrue( item.getInstance().asScala exists (i => i.getAccessright.getOpenAccessRoute == OpenAccessRoute.hybrid) ) - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) - println(mapper.writeValueAsString(item)) + println(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(item)) } @@ -734,7 +739,7 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -751,8 +756,7 @@ class CrossrefMappingTest { item.getInstance().asScala exists (i => i.getAccessright.getClassid.equals("EMBARGO")) ) assertTrue(item.getInstance().asScala exists (i => i.getAccessright.getOpenAccessRoute == null)) - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) - println(mapper.writeValueAsString(item)) + println(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(item)) } @@ -769,7 +773,7 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -786,8 +790,8 @@ class CrossrefMappingTest { item.getInstance().asScala exists (i => i.getAccessright.getClassid.equals("EMBARGO")) ) assertTrue(item.getInstance().asScala exists (i => i.getAccessright.getOpenAccessRoute == null)) - mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT) - println(mapper.writeValueAsString(item)) + + println(mapper.writerWithDefaultPrettyPrinter().writeValueAsString(item)) } @@ -802,7 +806,7 @@ class CrossrefMappingTest { assertNotNull(json) assertFalse(json.isEmpty); - val resultList: List[Oaf] = Crossref2Oaf.convert(json) + val resultList: List[Oaf] = Crossref2Oaf.convert(json, vocabularies) assertTrue(resultList.nonEmpty) @@ -812,9 +816,8 @@ class CrossrefMappingTest { assertEquals(1, item.getInstance().get(0).getUrl().size()) assertEquals( "https://doi.org/10.1016/j.jas.2019.105013", - item.getInstance().get(0).getUrl().get(0) + item.getInstance().get(0).getUrl.get(0) ) - //println(mapper.writeValueAsString(item)) }