From 5180b6ec8a764ac52a92dbcf10cc20742f3d8fd1 Mon Sep 17 00:00:00 2001 From: "miriam.baglioni" Date: Thu, 7 Mar 2024 10:47:13 +0100 Subject: [PATCH] [FOSNEW] removed test class --- .../fosnodoi/CreateActionSetSparkJobTest.java | 176 ------------------ 1 file changed, 176 deletions(-) delete mode 100644 dhp-workflows/dhp-aggregation/src/test/java/eu/dnetlib/dhp/actionmanager/fosnodoi/CreateActionSetSparkJobTest.java diff --git a/dhp-workflows/dhp-aggregation/src/test/java/eu/dnetlib/dhp/actionmanager/fosnodoi/CreateActionSetSparkJobTest.java b/dhp-workflows/dhp-aggregation/src/test/java/eu/dnetlib/dhp/actionmanager/fosnodoi/CreateActionSetSparkJobTest.java deleted file mode 100644 index fa98e96d2..000000000 --- a/dhp-workflows/dhp-aggregation/src/test/java/eu/dnetlib/dhp/actionmanager/fosnodoi/CreateActionSetSparkJobTest.java +++ /dev/null @@ -1,176 +0,0 @@ - -package eu.dnetlib.dhp.actionmanager.fosnodoi; - -import static org.junit.jupiter.api.Assertions.assertEquals; - -import java.io.IOException; -import java.nio.file.Files; -import java.nio.file.Path; - -import org.apache.commons.io.FileUtils; -import org.apache.hadoop.io.Text; -import org.apache.spark.SparkConf; -import org.apache.spark.api.java.JavaRDD; -import org.apache.spark.api.java.JavaSparkContext; -import org.apache.spark.sql.Dataset; -import org.apache.spark.sql.Encoders; -import org.apache.spark.sql.Row; -import org.apache.spark.sql.SparkSession; -import org.junit.jupiter.api.AfterAll; -import org.junit.jupiter.api.Assertions; -import org.junit.jupiter.api.BeforeAll; -import org.junit.jupiter.api.Test; -import org.slf4j.Logger; -import org.slf4j.LoggerFactory; - -import com.fasterxml.jackson.databind.ObjectMapper; - -import eu.dnetlib.dhp.schema.action.AtomicAction; -import eu.dnetlib.dhp.schema.oaf.OafEntity; - -public class CreateActionSetSparkJobTest { - - private static final ObjectMapper OBJECT_MAPPER = new ObjectMapper(); - - private static SparkSession spark; - - private static Path workingDir; - - private static final Logger log = LoggerFactory.getLogger(CreateActionSetSparkJobTest.class); - - @BeforeAll - public static void beforeAll() throws IOException { - workingDir = Files - .createTempDirectory(CreateActionSetSparkJobTest.class.getSimpleName()); - log.info("using work dir {}", workingDir); - - SparkConf conf = new SparkConf(); - conf.setAppName(CreateActionSetSparkJobTest.class.getSimpleName()); - - conf.setMaster("local[*]"); - conf.set("spark.driver.host", "localhost"); - conf.set("hive.metastore.local", "true"); - conf.set("spark.ui.enabled", "false"); - conf.set("spark.sql.warehouse.dir", workingDir.toString()); - conf.set("hive.metastore.warehouse.dir", workingDir.resolve("warehouse").toString()); - - spark = SparkSession - .builder() - .appName(CreateActionSetSparkJobTest.class.getSimpleName()) - .config(conf) - .getOrCreate(); - } - - @AfterAll - public static void afterAll() throws IOException { - FileUtils.deleteDirectory(workingDir.toFile()); - spark.stop(); - } - - private void runJob(String resultsInputPath, String outputPath) throws Exception { - CreateActionSetSparkJob - .main( - new String[] { - "-isSparkSessionManaged", Boolean.FALSE.toString(), - "-sourcePath", resultsInputPath, - - "-outputPath", outputPath, - }); - } - - @Test - void testScores() throws Exception { - - String resultsInputPath = getClass() - .getResource("/eu/dnetlib/dhp/actionmanager/fosnodoi/results.json") - .getPath(); - - String outputPath = workingDir.toString() + "/actionSet"; - - // execute the job to generate the action sets for result scores - runJob(resultsInputPath, outputPath); - final JavaSparkContext sc = new JavaSparkContext(spark.sparkContext()); - - sc - .sequenceFile(outputPath, Text.class, Text.class) - .foreach(t -> System.out.println(new ObjectMapper().writeValueAsString(t))); - - } - - void assertResultImpactScores(Dataset testDataset) { - Assertions - .assertEquals( - "6.63451994567e-09", testDataset - .filter( - "oaid='50|arXiv_dedup_::4a2d5fd8d71daec016c176ec71d957b1' " + - "and id = 'influence'") - .select("value") - .collectAsList() - .get(0) - .getString(0)); - Assertions - .assertEquals( - "0.348694533145", testDataset - .filter( - "oaid='50|arXiv_dedup_::4a2d5fd8d71daec016c176ec71d957b1' " + - "and id = 'popularity_alt'") - .select("value") - .collectAsList() - .get(0) - .getString(0)); - Assertions - .assertEquals( - "2.16094680115e-09", testDataset - .filter( - "oaid='50|arXiv_dedup_::4a2d5fd8d71daec016c176ec71d957b1' " + - "and id = 'popularity'") - .select("value") - .collectAsList() - .get(0) - .getString(0)); - } - - void assertProjectImpactScores(Dataset testDataset) throws Exception { - - Assertions - .assertEquals( - "0", testDataset - .filter( - "oaid='40|nih_________::c02a8233e9b60f05bb418f0c9b714833' " + - "and id = 'numOfInfluentialResults'") - .select("value") - .collectAsList() - .get(0) - .getString(0)); - Assertions - .assertEquals( - "1", testDataset - .filter( - "oaid='40|nih_________::c02a8233e9b60f05bb418f0c9b714833' " + - "and id = 'numOfPopularResults'") - .select("value") - .collectAsList() - .get(0) - .getString(0)); - Assertions - .assertEquals( - "25", testDataset - .filter( - "oaid='40|nih_________::c02a8233e9b60f05bb418f0c9b714833' " + - "and id = 'totalImpulse'") - .select("value") - .collectAsList() - .get(0) - .getString(0)); - Assertions - .assertEquals( - "43", testDataset - .filter( - "oaid='40|nih_________::c02a8233e9b60f05bb418f0c9b714833' " + - "and id = 'totalCitationCount'") - .select("value") - .collectAsList() - .get(0) - .getString(0)); - } -}