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map w3id as instance url

This commit is contained in:
Alessia Bardi 2022-09-28 14:16:39 +02:00
parent b5b5a4c192
commit 49360770d7
3 changed files with 27 additions and 23 deletions
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3
dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java
View File

@ -177,6 +177,9 @@ public class OdfToOafMapper extends AbstractMdRecordToOafMapper {
for (final Object o : doc.selectNodes("//*[local-name()='identifier' and ./@identifierType='landingPage']")) { for (final Object o : doc.selectNodes("//*[local-name()='identifier' and ./@identifierType='landingPage']")) {
url.add(trimAndDecodeUrl(((Node) o).getText().trim())); url.add(trimAndDecodeUrl(((Node) o).getText().trim()));
} }
for (final Object o : doc.selectNodes("//*[local-name()='identifier' and ./@identifierType='w3id']")) {
url.add(trimAndDecodeUrl(((Node) o).getText().trim()));
}
Set<String> validUrl = validateUrl(url); Set<String> validUrl = validateUrl(url);

17
dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java
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@ -936,11 +936,18 @@ class MappersTest {
System.out.println("***************"); System.out.println("***************");
System.out.println(new ObjectMapper().writeValueAsString(list)); System.out.println(new ObjectMapper().writeValueAsString(list));
System.out.println("***************"); System.out.println("***************");
// final OtherResearchProduct p = (OtherResearchProduct) list.get(0); assertEquals(5, list.size());
// assertValidId(p.getId()); final OtherResearchProduct p = (OtherResearchProduct) list.get(0);
// assertValidId(p.getCollectedfrom().get(0).getKey()); assertValidId(p.getId());
// System.out.println(p.getTitle().get(0).getValue()); assertTrue(p.getId().startsWith("50|w3id"));
// assertTrue(StringUtils.isNotBlank(p.getTitle().get(0).getValue())); assertValidId(p.getCollectedfrom().get(0).getKey());
assertTrue(StringUtils.isNotBlank(p.getTitle().get(0).getValue()));
assertEquals(1, p.getInstance().size());
assertEquals("https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca", p.getPid().get(0).getValue());
Instance inst = p.getInstance().get(0);
assertEquals("https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca", inst.getPid().get(0).getValue());
assertEquals("https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca", inst.getUrl().get(0));
} }
@Test @Test

30
dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/raw/rohub.xml
View File

@ -21,15 +21,13 @@
</header> </header>
<metadata> <metadata>
<datacite:resource> <datacite:resource>
<datacite:identifier identifierType="URL">https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca</datacite:identifier> <datacite:identifier identifierType="w3id">https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca</datacite:identifier>
<datacite:alternateIdentifiers/> <datacite:alternateIdentifiers>
<datacite:alternateIdentifier alternateIdentifierType="w3id">https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca</datacite:alternateIdentifier>
</datacite:alternateIdentifiers>
<datacite:relatedIdentifiers> <datacite:relatedIdentifiers>
<datacite:relatedIdentifier relatedIdentifierType="" relationType=""> <datacite:relatedIdentifier relatedIdentifierType="w3id" relationType="HasPart">https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca/resources/24fae96f-f986-46e1-bfd0-a21ca20ff0ce</datacite:relatedIdentifier>
https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca/resources/24fae96f-f986-46e1-bfd0-a21ca20ff0ce <datacite:relatedIdentifier relatedIdentifierType="w3id" relationType="HasPart">https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca/resources/6d3427a8-352e-49f4-9796-f618c44dc16d</datacite:relatedIdentifier>
</datacite:relatedIdentifier>
<datacite:relatedIdentifier relatedIdentifierType="" relationType="">
https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca/resources/6d3427a8-352e-49f4-9796-f618c44dc16d
</datacite:relatedIdentifier>
</datacite:relatedIdentifiers> </datacite:relatedIdentifiers>
<datacite:resourceType xs:anyURI="http://purl.org/coar/resource_type/c_1843">RO-crate</datacite:resourceType> <datacite:resourceType xs:anyURI="http://purl.org/coar/resource_type/c_1843">RO-crate</datacite:resourceType>
<datacite:rightsList> <datacite:rightsList>
@ -43,21 +41,17 @@
</datacite:descriptions> </datacite:descriptions>
<datacite:publisher>Poznań Supercomputing and Networking Center</datacite:publisher> <datacite:publisher>Poznań Supercomputing and Networking Center</datacite:publisher>
<contributors xmlns="http://datacite.org/schema/kernel-4"> <contributors xmlns="http://datacite.org/schema/kernel-4">
<contributor> <contributor contributorType="Researcher">
<contributor contributorType="Researcher"> <contributorName>Generation Service</contributorName>
<contributorName>Generation Service</contributorName>
</contributor>
</contributor> </contributor>
</contributors> </contributors>
<creators xmlns="http://datacite.org/schema/kernel-4"> <creators xmlns="http://datacite.org/schema/kernel-4">
<creator> <creator>
<creator> <creatorName>CNR-ISMAR</creatorName>
<creatorName>CNR-ISMAR</creatorName>
</creator>
</creator> </creator>
</creators> </creators>
<dates xmlns="http://datacite.org/schema/kernel-4"> <dates xmlns="http://datacite.org/schema/kernel-4">
<date dateType="Created">2018-06-20T11:21:46Z</date> <date dateType="Issued">2018-06-20T11:21:46Z</date>
</dates> </dates>
<dc:descriptions> <dc:descriptions>
<dc:description descriptionType="Abstract">The use of biological effects tools offer enormous potential to meet the challenges outlined by the European Union Marine Strategy Framework Directive (MSFD) whereby Member States are required to develop a robust set of tools for defining 11 qualitative descriptors of Good Environmental Status (GES), such as demonstrating that "Concentrations of contaminants are at levels not giving rise to pollution effects" (GES Descriptor 8). This paper discusses the combined approach of monitoring chemical contaminant levels, along side biological effect measurements relating to the effect of pollutants, for undertaking assessments of GES across European marine regions. We outline the minimum standards that biological effects tools should meet if they are to be used for defining GES in relation to Descriptor 8 and describe the current international initiatives underway to develop assessment criteria for these biological effects techniques. Crown Copyright (C) 2010 Published by Elsevier Ltd. All rights reserved.</dc:description> <dc:description descriptionType="Abstract">The use of biological effects tools offer enormous potential to meet the challenges outlined by the European Union Marine Strategy Framework Directive (MSFD) whereby Member States are required to develop a robust set of tools for defining 11 qualitative descriptors of Good Environmental Status (GES), such as demonstrating that "Concentrations of contaminants are at levels not giving rise to pollution effects" (GES Descriptor 8). This paper discusses the combined approach of monitoring chemical contaminant levels, along side biological effect measurements relating to the effect of pollutants, for undertaking assessments of GES across European marine regions. We outline the minimum standards that biological effects tools should meet if they are to be used for defining GES in relation to Descriptor 8 and describe the current international initiatives underway to develop assessment criteria for these biological effects techniques. Crown Copyright (C) 2010 Published by Elsevier Ltd. All rights reserved.</dc:description>
@ -74,9 +68,9 @@
<subject>EOSC::RO-crate</subject> <subject>EOSC::RO-crate</subject>
</subjects> </subjects>
</datacite:resource> </datacite:resource>
<oaf:identifier identifierType="URL">https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca</oaf:identifier> <oaf:identifier identifierType="w3id">https://w3id.org/ro-id/0ab171a7-45c5-4194-82d4-850955504bca</oaf:identifier>
<dr:CobjCategory type="other research product">other research product</dr:CobjCategory> <dr:CobjCategory type="other research product">other research product</dr:CobjCategory>
<oaf:dateAccepted/> <oaf:dateAccepted>2018-06-20</oaf:dateAccepted>
<oaf:accessrights>OPEN</oaf:accessrights> <oaf:accessrights>OPEN</oaf:accessrights>
<oaf:language/> <oaf:language/>
<oaf:hostedBy name="ROHub" id="fairsharing_::4119"/> <oaf:hostedBy name="ROHub" id="fairsharing_::4119"/>