From 34172455d1057f947d299a9d8799684fce6991db Mon Sep 17 00:00:00 2001 From: "miriam.baglioni" Date: Wed, 24 May 2023 09:56:23 +0200 Subject: [PATCH] [BulkTag] Adding remove constraints to specify when a community must not appear in the context of a result. --- .../dhp/bulktag/community/Community.java | 9 + .../community/CommunityConfiguration.java | 15 + .../CommunityConfigurationFactory.java | 14 + .../dhp/bulktag/community/ResultTagger.java | 23 +- .../resources/eu/dnetlib/dhp/bulktag/query.xq | 3 + .../dnetlib/dhp/bulktag/BulkTagJobTest.java | 49 +- .../tagging_conf_remove.xml | 1555 +++++++++++++++++ .../dataset_10.json | 4 +- 8 files changed, 1665 insertions(+), 7 deletions(-) create mode 100644 dhp-workflows/dhp-enrichment/src/test/resources/eu/dnetlib/dhp/bulktag/communityconfiguration/tagging_conf_remove.xml diff --git a/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/Community.java b/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/Community.java index c218b0c2b..b44376e22 100644 --- a/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/Community.java +++ b/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/Community.java @@ -15,6 +15,7 @@ public class Community implements Serializable { private List providers = new ArrayList<>(); private List zenodoCommunities = new ArrayList<>(); private SelectionConstraints constraints = new SelectionConstraints(); + private SelectionConstraints removeConstraints = new SelectionConstraints(); public String toJson() { final Gson g = new Gson(); @@ -67,4 +68,12 @@ public class Community implements Serializable { public void setConstraints(SelectionConstraints constraints) { this.constraints = constraints; } + + public SelectionConstraints getRemoveConstraints() { + return removeConstraints; + } + + public void setRemoveConstraints(SelectionConstraints removeConstraints) { + this.removeConstraints = removeConstraints; + } } diff --git a/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/CommunityConfiguration.java b/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/CommunityConfiguration.java index a30e1cbbb..689628869 100644 --- a/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/CommunityConfiguration.java +++ b/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/CommunityConfiguration.java @@ -28,6 +28,8 @@ public class CommunityConfiguration implements Serializable { private Map selectionConstraintsMap = new HashMap<>(); // map eosc datasource -> communityid private Map>> eoscDatasourceMap = new HashMap<>(); + //map communityid -> remove constraints + private Map removeConstraintsMap = new HashMap<>(); public Map>> getEoscDatasourceMap() { return eoscDatasourceMap; @@ -71,6 +73,14 @@ public class CommunityConfiguration implements Serializable { this.selectionConstraintsMap = selectionConstraintsMap; } + public Map getRemoveConstraintsMap() { + return removeConstraintsMap; + } + + public void setRemoveConstraintsMap(Map removeConstraintsMap) { + this.removeConstraintsMap = removeConstraintsMap; + } + CommunityConfiguration(final Map communities) { this.communities = communities; init(); @@ -90,6 +100,9 @@ public class CommunityConfiguration implements Serializable { if (selectionConstraintsMap == null) { selectionConstraintsMap = Maps.newHashMap(); } + if (removeConstraintsMap == null) { + removeConstraintsMap = Maps.newHashMap(); + } for (Community c : getCommunities().values()) { // get subjects @@ -111,6 +124,8 @@ public class CommunityConfiguration implements Serializable { zenodocommunityMap); } selectionConstraintsMap.put(id, c.getConstraints()); + + removeConstraintsMap.put(id, c.getRemoveConstraints()); } } diff --git a/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/CommunityConfigurationFactory.java b/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/CommunityConfigurationFactory.java index da144fb7b..695bbc363 100644 --- a/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/CommunityConfigurationFactory.java +++ b/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/CommunityConfigurationFactory.java @@ -86,6 +86,7 @@ public class CommunityConfigurationFactory { c.setProviders(parseDatasources(node)); c.setZenodoCommunities(parseZenodoCommunities(node)); c.setConstraints(parseConstrains(node)); + c.setRemoveConstraints(parseRemoveConstrains(node)); return c; } @@ -102,6 +103,19 @@ public class CommunityConfigurationFactory { return selectionConstraints; } + private static SelectionConstraints parseRemoveConstrains(Node node) { + Node constsNode = node.selectSingleNode("./removeConstraints"); + if (constsNode == null || StringUtils.isBlank(StringUtils.trim(constsNode.getText()))) { + return new SelectionConstraints(); + } + SelectionConstraints selectionConstraints = new Gson() + .fromJson(constsNode.getText(), SelectionConstraints.class); + + selectionConstraints.setSelection(resolver); + log.info("number of selection constraints set " + selectionConstraints.getCriteria().size()); + return selectionConstraints; + } + private static List parseSubjects(final Node node) { final List subjects = Lists.newArrayList(); diff --git a/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/ResultTagger.java b/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/ResultTagger.java index 3f0954f38..0be2f59a9 100644 --- a/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/ResultTagger.java +++ b/dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/bulktag/community/ResultTagger.java @@ -79,6 +79,23 @@ public class ResultTagger implements Serializable { break; } + // communities contains all the communities to be not added to the context + final Set removeCommunities = new HashSet<>(); + + conf + .getRemoveConstraintsMap() + .keySet() + .forEach(communityId -> { + if (conf.getRemoveConstraintsMap().get(communityId).getCriteria() != null && + conf + .getRemoveConstraintsMap() + .get(communityId) + .getCriteria() + .stream() + .anyMatch(crit -> crit.verifyCriteria(param))) + removeCommunities.add(communityId); + }); + // communities contains all the communities to be added as context for the result final Set communities = new HashSet<>(); @@ -164,7 +181,8 @@ public class ResultTagger implements Serializable { .getSelectionConstraintsMap() .keySet() .forEach(communityId -> { - if (conf.getSelectionConstraintsMap().get(communityId).getCriteria() != null && + if (!removeCommunities.contains(communityId) && + conf.getSelectionConstraintsMap().get(communityId).getCriteria() != null && conf .getSelectionConstraintsMap() .get(communityId) @@ -175,6 +193,9 @@ public class ResultTagger implements Serializable { }); communities.addAll(aconstraints); + + communities.removeAll(removeCommunities); + if (aconstraints.size() > 0) log.info("Found {} for advancedConstraints ", aconstraints.size()); diff --git a/dhp-workflows/dhp-enrichment/src/main/resources/eu/dnetlib/dhp/bulktag/query.xq b/dhp-workflows/dhp-enrichment/src/main/resources/eu/dnetlib/dhp/bulktag/query.xq index a9c0d9e3f..052037efb 100644 --- a/dhp-workflows/dhp-enrichment/src/main/resources/eu/dnetlib/dhp/bulktag/query.xq +++ b/dhp-workflows/dhp-enrichment/src/main/resources/eu/dnetlib/dhp/bulktag/query.xq @@ -10,6 +10,9 @@ where $x//CONFIGURATION/context[./@type='community' or ./@type='ri'] and $x//con return { $x//CONFIGURATION/context/@id} + +{$x//CONFIGURATION/context/param[./@name='removeConstraints']/text() } + {$x//CONFIGURATION/context/param[./@name='advancedConstraints']/text() } diff --git a/dhp-workflows/dhp-enrichment/src/test/java/eu/dnetlib/dhp/bulktag/BulkTagJobTest.java b/dhp-workflows/dhp-enrichment/src/test/java/eu/dnetlib/dhp/bulktag/BulkTagJobTest.java index 4432210f1..aff5ee5fb 100644 --- a/dhp-workflows/dhp-enrichment/src/test/java/eu/dnetlib/dhp/bulktag/BulkTagJobTest.java +++ b/dhp-workflows/dhp-enrichment/src/test/java/eu/dnetlib/dhp/bulktag/BulkTagJobTest.java @@ -39,8 +39,10 @@ public class BulkTagJobTest { + " \"contributor\" : \"$['contributor'][*]['value']\"," + " \"description\" : \"$['description'][*]['value']\", " + " \"subject\" :\"$['subject'][*]['value']\" , " + - "\"fos\" : \"$['subject'][?(@['qualifier']['classid']=='FOS')].value\"" + - "} "; + "\"fos\" : \"$['subject'][?(@['qualifier']['classid']=='FOS')].value\"," + + "\"sdg\" : \"$['subject'][?(@['qualifier']['classid']=='SDG')].value\"," + + "\"hostedby\" : \"$['instance'][*]['hostedby']['key']\" , " + + "\"collectedfrom\" : \"$['instance'][*]['collectedfrom']['key']\"} "; private static SparkSession spark; @@ -56,7 +58,7 @@ public class BulkTagJobTest { .toString( BulkTagJobTest.class .getResourceAsStream( - "/eu/dnetlib/dhp/bulktag/communityconfiguration/tagging_conf_dth.xml")); + "/eu/dnetlib/dhp/bulktag/communityconfiguration/tagging_conf_remove.xml")); } catch (IOException e) { e.printStackTrace(); } @@ -1525,4 +1527,43 @@ public class BulkTagJobTest { .count()); } -} + + @Test + void removeTest() throws Exception { + final String pathMap = BulkTagJobTest.pathMap; + SparkBulkTagJob + .main( + new String[]{ + "-isTest", Boolean.TRUE.toString(), + "-isSparkSessionManaged", Boolean.FALSE.toString(), + "-sourcePath", + getClass().getResource("/eu/dnetlib/dhp/bulktag/sample/dataset/update_datasourcewithconstraints").getPath(), + "-taggingConf", taggingConf, + "-resultTableName", "eu.dnetlib.dhp.schema.oaf.Dataset", + "-outputPath", workingDir.toString() + "/dataset", + "-isLookUpUrl", MOCK_IS_LOOK_UP_URL, + "-pathMap", pathMap + }); + final JavaSparkContext sc = JavaSparkContext.fromSparkContext(spark.sparkContext()); + + JavaRDD tmp = sc + .textFile(workingDir.toString() + "/dataset") + .map(item -> OBJECT_MAPPER.readValue(item, Dataset.class)); + + Assertions.assertEquals(12, tmp.count()); + org.apache.spark.sql.Dataset verificationDataset = spark + .createDataset(tmp.rdd(), Encoders.bean(Dataset.class)); + + verificationDataset.createOrReplaceTempView("dataset"); + String query = "select id, MyT.id community, MyD.provenanceaction.classid provenance, MyD.provenanceaction.classname name " + + "from dataset " + + "lateral view explode(context) c as MyT " + + "lateral view explode(MyT.datainfo) d as MyD " + + "where MyD.inferenceprovenance = 'bulktagging'"; + + org.apache.spark.sql.Dataset idExplodeCommunity = spark.sql(query); + + idExplodeCommunity.show(false); + } + + } diff --git a/dhp-workflows/dhp-enrichment/src/test/resources/eu/dnetlib/dhp/bulktag/communityconfiguration/tagging_conf_remove.xml b/dhp-workflows/dhp-enrichment/src/test/resources/eu/dnetlib/dhp/bulktag/communityconfiguration/tagging_conf_remove.xml new file mode 100644 index 000000000..edd6c7e0a --- /dev/null +++ b/dhp-workflows/dhp-enrichment/src/test/resources/eu/dnetlib/dhp/bulktag/communityconfiguration/tagging_conf_remove.xml @@ -0,0 +1,1555 @@ + + + + + + + zenodo + + + + + + + + + + + + + + + + + + + + + + re3data_____::a507cdacc5bbcc08761c92185dee5cab + + + + + + + + + + + + rda + + + + + + + + SDG13 - Climate action + SDG8 - Decent work and economic growth + SDG15 - Life on land + SDG2 - Zero hunger + SDG17 - Partnerships for the goals + SDG10 - Reduced inequalities + SDG5 - Gender equality + SDG12 - Responsible consumption and production + SDG14 - Life below water + SDG6 - Clean water and sanitation + SDG11 - Sustainable cities and communities + SDG1 - No poverty + SDG3 - Good health and well being + SDG7 - Affordable and clean energy + SDG4 - Quality education + SDG9 - Industry innovation and infrastructure + SDG16 - Peace justice and strong institutions + + + + + + + + modern art + monuments + europeana data model + sites + field walking + frescoes + LIDO metadata schema + art history + excavation + Arts and Humanities General + cities + coins + temples + numismatics + lithics + roads + environmental archaeology + digital cultural heritage + archaeological reports + history + CRMba + churches + cultural heritage + archaeological stratigraphy + religious art + buidings + digital humanities + survey + archaeological sites + linguistic studies + bioarchaeology + architectural orders + palaeoanthropology + fine arts + europeana + CIDOC CRM + decorations + classic art + stratigraphy + digital archaeology + intangible cultural heritage + walls + humanities + chapels + CRMtex + Language and Literature + paintings + archaeology + fair data + mosaics + burials + architecture + medieval art + castles + CARARE metadata schema + statues + natural language processing + inscriptions + CRMsci + vaults + contemporary art + Arts and Humanities + CRMarchaeo + pottery + site + architectural + vessels + + + + re3data_____::9ebe127e5f3a0bf401875690f3bb6b81 + + + + doajarticles::c6cd4b532e12868c1d760a8d7cda6815 + + + + doajarticles::a6de4499bb87bf3c01add0a9e2c9ed0b + + + + doajarticles::6eb31d13b12bc06bbac06aef63cf33c9 + + + + doajarticles::0da84e9dfdc8419576169e027baa8028 + + + + re3data_____::84e123776089ce3c7a33db98d9cd15a8 + + + + openaire____::c5502a43e76feab55dd00cf50f519125 + + + + re3data_____::a48f09c562b247a9919acfe195549b47 + + + + opendoar____::97275a23ca44226c9964043c8462be96 + + + + + + storm + + + + crosscult + + + + wholodance_eu + + + + digcur2013 + + + + gravitate + + + + dipp2014 + + + + digitalhumanities + + + + dimpo + + + + adho + + + + chc + + + + wahr + + + + ibe + + + + ariadne + + + + parthenos-hub + + + + parthenos-training + + + + gandhara + + + + cmsouthasia + + + + nilgirihills + + + + shamsa_mustecio + + + + bodhgaya + + + + oac_dh-ch + + + + 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{"verb":"not_contains_caseinsensitive","field":"subject","value":"marine"}, + {"verb":"not_contains_caseinsensitive","field":"subject","value":"avionics"}, + {"verb":"not_contains_caseinsensitive","field":"subject","value":"battery"} + ]}, + {"constraint":[ + {"verb":"contains_caseinsensitive","field":"title","value":"Human Digital Twins"} + ]}, + {"constraint":[ + {"verb":"contains_caseinsensitive","field":"description","value":"Human Digital Twins"} + ]}, + {"constraint":[ + {"verb":"equals_caseinsensitive","field":"subject","value":"Human Digital Twins"} + ]}, + {"constraint":[ + {"verb":"contains_caseinsensitive","field":"title","value":"Virtual Human Twin"} + ]}, + {"constraint":[ + {"verb":"contains_caseinsensitive","field":"description","value":"Virtual Human Twin"} + ]}, + {"constraint":[ + {"verb":"equals_caseinsensitive","field":"subject","value":"Virtual Human Twin"} + ]}, + {"constraint":[ + {"verb":"equals_caseinsensitive","field":"subject","value":"digital twin"}, + 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El formato es al estilo inglés, similar al de la Oxford Union, donde algunos jóvenes se reunían a debatir sobre temas de la más candente actualidad y polemizaban con la intención de formarse en tan valoradas habilidades.\n\nLa Liga de Debate CICAE-UCJC es una ocasión única para los alumnos de ponerse en contacto con herramientas tan útiles como la oratoria y la comunicación efectiva. Pero, sobre todo, una oportunidad de fomentar el pensamiento crítico y la socialización entre alumnos con espíritu emprendedor. La Liga de Debate CICAE - Universidad Camilo José Cela se diferencia del resto de torneos en que potenciamos que sea eminentemente formativa. Alumnos y profesores reciben formación en comunicación, oratoria y debate por parte de alguno de los expertos en debate españoles más reconocidos en la escena internacional.\n\nDatos de la III Liga de Debate CICAE - UCJC http://ligacicae.ucjc.edu/","dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"0.9","inferenceprovenance":"","provenanceaction":{"classid":"sysimport:crosswalk:repository","classname":"sysimport:crosswalk:repository","schemeid":"dnet:provenanceActions","schemename":"dnet:provenanceActions"}}}],"dateofacceptance":{"value":"2018-10-23","dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"0.9","inferenceprovenance":"","provenanceaction":{"classid":"sysimport:crosswalk:repository","classname":"sysimport:crosswalk:repository","schemeid":"dnet:provenanceActions","schemename":"dnet:provenanceActions"}}},"publisher":null,"embargoenddate":null,"source":[],"fulltext":[],"format":[],"contributor":[{"value":"Universidad 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