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using objectSubType as originalType in Crossref2Oaf, code formatting

This commit is contained in:
Claudio Atzori 2023-12-01 15:03:05 +01:00
parent 622fafbd2e
commit 33cb483c75
4 changed files with 10 additions and 10 deletions
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10
dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/datacite/DataciteToOAFTransformation.scala
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@ -176,7 +176,8 @@ object DataciteToOAFTransformation {
vocabularies.getSynonymAsQualifier( vocabularies.getSynonymAsQualifier(
ModelConstants.DNET_RESULT_TYPOLOGIES, ModelConstants.DNET_RESULT_TYPOLOGIES,
typeQualifier.getClassid typeQualifier.getClassid
), resourceType ),
resourceType
) )
} }
if (schemaOrg != null && schemaOrg.nonEmpty) { if (schemaOrg != null && schemaOrg.nonEmpty) {
@ -188,7 +189,8 @@ object DataciteToOAFTransformation {
vocabularies.getSynonymAsQualifier( vocabularies.getSynonymAsQualifier(
ModelConstants.DNET_RESULT_TYPOLOGIES, ModelConstants.DNET_RESULT_TYPOLOGIES,
typeQualifier.getClassid typeQualifier.getClassid
), schemaOrg ),
schemaOrg
) )
} }
@ -203,7 +205,8 @@ object DataciteToOAFTransformation {
vocabularies.getSynonymAsQualifier( vocabularies.getSynonymAsQualifier(
ModelConstants.DNET_RESULT_TYPOLOGIES, ModelConstants.DNET_RESULT_TYPOLOGIES,
typeQualifier.getClassid typeQualifier.getClassid
), resourceTypeGeneral ),
resourceTypeGeneral
) )
} }
@ -228,7 +231,6 @@ object DataciteToOAFTransformation {
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1) itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
i.setInstanceTypeMapping(List(itm).asJava) i.setInstanceTypeMapping(List(itm).asJava)
typeQualifiers._2.getClassname match { typeQualifiers._2.getClassname match {
case "dataset" => case "dataset" =>
val r = new OafDataset val r = new OafDataset

1
dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/sx/bio/BioDBToOAF.scala
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@ -593,7 +593,6 @@ object BioDBToOAF {
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1) itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
i.setInstanceTypeMapping(List(itm).asJava) i.setInstanceTypeMapping(List(itm).asJava)
i.setCollectedfrom(collectedFromMap("ebi")) i.setCollectedfrom(collectedFromMap("ebi"))
d.setInstance(List(i).asJava) d.setInstance(List(i).asJava)
i.setDateofacceptance( i.setDateofacceptance(

5
dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/sx/bio/pubmed/PubMedToOaf.scala
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@ -195,7 +195,7 @@ object PubMedToOaf {
pubmedInstance.setInstanceTypeMapping(List(itm).asJava) pubmedInstance.setInstanceTypeMapping(List(itm).asJava)
} else { } else {
val i_type = article.getPublicationTypes.asScala val i_type = article.getPublicationTypes.asScala
.map(s => (s.getValue,getVocabularyTerm(ModelConstants.DNET_PUBLICATION_RESOURCE, vocabularies, s.getValue))) .map(s => (s.getValue, getVocabularyTerm(ModelConstants.DNET_PUBLICATION_RESOURCE, vocabularies, s.getValue)))
.find(q => q._2 != null) .find(q => q._2 != null)
if (i_type.isDefined) { if (i_type.isDefined) {
@ -205,8 +205,7 @@ object PubMedToOaf {
itm.setOriginalType(i_type.get._1) itm.setOriginalType(i_type.get._1)
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1) itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
pubmedInstance.setInstanceTypeMapping(List(itm).asJava) pubmedInstance.setInstanceTypeMapping(List(itm).asJava)
} } else
else
return null return null
} }
val result = createResult(pubmedInstance.getInstancetype, vocabularies) val result = createResult(pubmedInstance.getInstancetype, vocabularies)

4
dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/Crossref2Oaf.scala
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@ -107,7 +107,7 @@ case object Crossref2Oaf {
.map(f => f.id) .map(f => f.id)
} }
def mappingResult(result: Result, json: JValue, cobjCategory: String, originalType:String): Result = { def mappingResult(result: Result, json: JValue, cobjCategory: String, originalType: String): Result = {
implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats
//MAPPING Crossref DOI into PID //MAPPING Crossref DOI into PID
@ -372,7 +372,7 @@ case object Crossref2Oaf {
objectType, objectType,
mappingCrossrefSubType.getOrElse(objectSubType, "0038 Other literature type") mappingCrossrefSubType.getOrElse(objectSubType, "0038 Other literature type")
) )
mappingResult(result, json, cOBJCategory, originalType) mappingResult(result, json, cOBJCategory, objectSubType)
if (result == null || result.getId == null) if (result == null || result.getId == null)
return List() return List()