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@ -1,4 +1,3 @@
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package eu.dnetlib.oa.graph.usagestats.export;
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import java.io.*;
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@ -28,38 +27,38 @@ import org.slf4j.LoggerFactory;
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*/
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public class IrusStats {
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private String irusUKURL;
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private String irusUKURL;
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private static final Logger logger = LoggerFactory.getLogger(IrusStats.class);
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private static final Logger logger = LoggerFactory.getLogger(IrusStats.class);
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public IrusStats(String irusUKURL) throws Exception {
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this.irusUKURL = irusUKURL;
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// The following may not be needed - It will be created when JSON tables are created
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public IrusStats(String irusUKURL) throws Exception {
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this.irusUKURL = irusUKURL;
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// The following may not be needed - It will be created when JSON tables are created
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// createTmpTables();
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}
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public void reCreateLogDirs() throws Exception {
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FileSystem dfs = FileSystem.get(new Configuration());
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logger.info("Deleting irusUKReport directory: " + ExecuteWorkflow.irusUKReportPath);
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dfs.delete(new Path(ExecuteWorkflow.irusUKReportPath), true);
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logger.info("Creating irusUKReport directory: " + ExecuteWorkflow.irusUKReportPath);
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dfs.mkdirs(new Path(ExecuteWorkflow.irusUKReportPath));
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}
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public void createTables() throws Exception {
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try {
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logger.info("Creating sushilog");
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Statement stmt = ConnectDB.getHiveConnection().createStatement();
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String sqlCreateTableSushiLog = "CREATE TABLE IF NOT EXISTS " + ConnectDB.getUsageStatsDBSchema()
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+ ".sushilog(source STRING, " +
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"repository STRING, rid STRING, date STRING, metric_type STRING, count INT) clustered by (source, " +
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"repository, rid, date, metric_type) into 100 buckets stored as orc tblproperties('transactional'='true')";
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stmt.executeUpdate(sqlCreateTableSushiLog);
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logger.info("Created sushilog");
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// To see how to apply to the ignore duplicate rules and indexes
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}
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public void reCreateLogDirs() throws Exception {
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FileSystem dfs = FileSystem.get(new Configuration());
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logger.info("Deleting irusUKReport directory: " + ExecuteWorkflow.irusUKReportPath);
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dfs.delete(new Path(ExecuteWorkflow.irusUKReportPath), true);
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logger.info("Creating irusUKReport directory: " + ExecuteWorkflow.irusUKReportPath);
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dfs.mkdirs(new Path(ExecuteWorkflow.irusUKReportPath));
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}
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public void createTables() throws Exception {
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try {
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logger.info("Creating sushilog");
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Statement stmt = ConnectDB.getHiveConnection().createStatement();
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String sqlCreateTableSushiLog = "CREATE TABLE IF NOT EXISTS " + ConnectDB.getUsageStatsDBSchema()
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+ ".sushilog(source STRING, "
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+ "repository STRING, rid STRING, date STRING, metric_type STRING, count INT) clustered by (source, "
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+ "repository, rid, date, metric_type) into 100 buckets stored as orc tblproperties('transactional'='true')";
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stmt.executeUpdate(sqlCreateTableSushiLog);
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logger.info("Created sushilog");
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// To see how to apply to the ignore duplicate rules and indexes
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// stmt.executeUpdate(sqlCreateTableSushiLog);
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// String sqlcreateRuleSushiLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS "
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// + " ON INSERT TO sushilog "
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@ -70,15 +69,14 @@ public class IrusStats {
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// stmt.executeUpdate(sqlcreateRuleSushiLog);
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// String createSushiIndex = "create index if not exists sushilog_duplicates on sushilog(source, repository, rid, date, metric_type);";
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// stmt.executeUpdate(createSushiIndex);
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stmt.close();
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ConnectDB.getHiveConnection().close();
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logger.info("Sushi Tables Created");
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} catch (Exception e) {
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logger.error("Failed to create tables: " + e);
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throw new Exception("Failed to create tables: " + e.toString(), e);
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}
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}
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stmt.close();
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ConnectDB.getHiveConnection().close();
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logger.info("Sushi Tables Created");
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} catch (Exception e) {
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logger.error("Failed to create tables: " + e);
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throw new Exception("Failed to create tables: " + e.toString(), e);
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}
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}
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// // The following may not be needed - It will be created when JSON tables are created
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// private void createTmpTables() throws Exception {
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@ -107,311 +105,315 @@ public class IrusStats {
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// throw new Exception("Failed to create tables: " + e.toString(), e);
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// }
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// }
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public void processIrusStats() throws Exception {
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Statement stmt = ConnectDB.getHiveConnection().createStatement();
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ConnectDB.getHiveConnection().setAutoCommit(false);
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logger.info("Adding JSON Serde jar");
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stmt.executeUpdate("add jar /usr/share/cmf/common_jars/hive-hcatalog-core-1.1.0-cdh5.14.0.jar");
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logger.info("Added JSON Serde jar");
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logger.info("Dropping sushilogtmp_json table");
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String dropSushilogtmpJson = "DROP TABLE IF EXISTS " +
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ConnectDB.getUsageStatsDBSchema() +
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".sushilogtmp_json";
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stmt.executeUpdate(dropSushilogtmpJson);
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logger.info("Dropped sushilogtmp_json table");
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logger.info("Creating irus_sushilogtmp_json table");
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String createSushilogtmpJson = "CREATE EXTERNAL TABLE IF NOT EXISTS " +
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ConnectDB.getUsageStatsDBSchema() + ".irus_sushilogtmp_json(\n" +
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" `ItemIdentifier` ARRAY<\n" +
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" struct<\n" +
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" Type: STRING,\n" +
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" Value: STRING\n" +
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" >\n" +
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" >,\n" +
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" `ItemPerformance` ARRAY<\n" +
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" struct<\n" +
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" `Period`: struct<\n" +
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" `Begin`: STRING,\n" +
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" `End`: STRING\n" +
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" >,\n" +
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" `Instance`: struct<\n" +
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" `Count`: STRING,\n" +
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" `MetricType`: STRING\n" +
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" >\n" +
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" >\n" +
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" >\n" +
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")\n" +
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"ROW FORMAT SERDE 'org.apache.hive.hcatalog.data.JsonSerDe'\n" +
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"LOCATION '" + ExecuteWorkflow.irusUKReportPath + "'\n" +
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"TBLPROPERTIES (\"transactional\"=\"false\")";
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stmt.executeUpdate(createSushilogtmpJson);
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logger.info("Created irus_sushilogtmp_json table");
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logger.info("Dropping irus_sushilogtmp table");
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String dropSushilogtmp = "DROP TABLE IF EXISTS " +
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ConnectDB.getUsageStatsDBSchema() +
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".irus_sushilogtmp";
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stmt.executeUpdate(dropSushilogtmp);
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logger.info("Dropped irus_sushilogtmp table");
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logger.info("Creating irus_sushilogtmp table");
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String createSushilogtmp = "CREATE TABLE " + ConnectDB.getUsageStatsDBSchema()
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+ ".irus_sushilogtmp(source STRING, repository STRING, " +
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"rid STRING, date STRING, metric_type STRING, count INT) clustered by (source) into 100 buckets stored as orc "
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+
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"tblproperties('transactional'='true')";
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stmt.executeUpdate(createSushilogtmp);
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logger.info("Created irus_sushilogtmp table");
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logger.info("Inserting to irus_sushilogtmp table");
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String insertSushilogtmp = "INSERT INTO " + ConnectDB.getUsageStatsDBSchema() + ".irus_sushilogtmp " +
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"SELECT 'IRUS-UK', CONCAT('opendoar____::', split(split(INPUT__FILE__NAME,'IrusIRReport_')[1],'_')[0]), " +
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"`ItemIdent`.`Value`, `ItemPerf`.`Period`.`Begin`, " +
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"`ItemPerf`.`Instance`.`MetricType`, `ItemPerf`.`Instance`.`Count` " +
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"FROM " + ConnectDB.getUsageStatsDBSchema() + ".irus_sushilogtmp_json " +
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"LATERAL VIEW posexplode(ItemIdentifier) ItemIdentifierTable AS seqi, ItemIdent " +
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"LATERAL VIEW posexplode(ItemPerformance) ItemPerformanceTable AS seqp, ItemPerf " +
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"WHERE `ItemIdent`.`Type`= 'OAI'";
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stmt.executeUpdate(insertSushilogtmp);
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logger.info("Inserted to irus_sushilogtmp table");
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logger.info("Creating downloads_stats table");
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String createDownloadsStats = "CREATE TABLE IF NOT EXISTS " + ConnectDB.getUsageStatsDBSchema()
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+ ".downloads_stats " +
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"(`source` string, " +
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"`repository_id` string, " +
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"`result_id` string, " +
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"`date` string, " +
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"`count` bigint, " +
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"`openaire` bigint)";
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stmt.executeUpdate(createDownloadsStats);
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logger.info("Created downloads_stats table");
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logger.info("Inserting into downloads_stats");
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String insertDStats = "INSERT INTO " + ConnectDB.getUsageStatsDBSchema() + ".downloads_stats " +
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"SELECT s.source, d.id AS repository_id, " +
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"ro.id as result_id, CONCAT(YEAR(date), '/', LPAD(MONTH(date), 2, '0')) as date, s.count, '0' " +
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"FROM " + ConnectDB.getUsageStatsDBSchema() + ".irus_sushilogtmp s, " +
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ConnectDB.getStatsDBSchema() + ".datasource_oids d, " +
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ConnectDB.getStatsDBSchema() + ".result_oids ro " +
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"WHERE s.repository=d.oid AND s.rid=ro.oid AND metric_type='ft_total' AND s.source='IRUS-UK'";
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stmt.executeUpdate(insertDStats);
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logger.info("Inserted into downloads_stats");
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logger.info("Creating sushilog table");
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String createSushilog = "CREATE TABLE IF NOT EXISTS " + ConnectDB.getUsageStatsDBSchema()
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+ ".sushilog " +
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"(`source` string, " +
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"`repository_id` string, " +
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"`rid` string, " +
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"`date` string, " +
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"`metric_type` string, " +
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"`count` int)";
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stmt.executeUpdate(createSushilog);
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logger.info("Created sushilog table");
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logger.info("Inserting to sushilog table");
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String insertToShushilog = "INSERT INTO " + ConnectDB.getUsageStatsDBSchema() + ".sushilog SELECT * FROM " +
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ConnectDB.getUsageStatsDBSchema()
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+ ".irus_sushilogtmp";
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stmt.executeUpdate(insertToShushilog);
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logger.info("Inserted to sushilog table");
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ConnectDB.getHiveConnection().close();
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}
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public void getIrusRRReport(String irusUKReportPath) throws Exception {
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SimpleDateFormat sdf = new SimpleDateFormat("YYYY-MM");
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// Setting the starting period
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Calendar start = (Calendar) ExecuteWorkflow.startingLogPeriod.clone();
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logger.info("(getIrusRRReport) Starting period for log download: " + sdf.format(start.getTime()));
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// Setting the ending period (last day of the month)
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Calendar end = (Calendar) ExecuteWorkflow.endingLogPeriod.clone();
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end.add(Calendar.MONTH, +1);
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end.add(Calendar.DAY_OF_MONTH, -1);
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logger.info("(getIrusRRReport) Ending period for log download: " + sdf.format(end.getTime()));
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String reportUrl = irusUKURL + "GetReport/?Report=RR1&Release=4&RequestorID=OpenAIRE&BeginDate=" +
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sdf.format(start.getTime()) + "&EndDate=" + sdf.format(end.getTime()) +
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"&RepositoryIdentifier=&ItemDataType=&NewJiscBand=&Granularity=Monthly&Callback=";
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logger.info("(getIrusRRReport) Getting report: " + reportUrl);
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String text = getJson(reportUrl, "", "");
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List<String> opendoarsToVisit = new ArrayList<String>();
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JSONParser parser = new JSONParser();
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JSONObject jsonObject = (JSONObject) parser.parse(text);
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jsonObject = (JSONObject) jsonObject.get("ReportResponse");
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jsonObject = (JSONObject) jsonObject.get("Report");
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jsonObject = (JSONObject) jsonObject.get("Report");
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jsonObject = (JSONObject) jsonObject.get("Customer");
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JSONArray jsonArray = (JSONArray) jsonObject.get("ReportItems");
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int i = 0;
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for (Object aJsonArray : jsonArray) {
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JSONObject jsonObjectRow = (JSONObject) aJsonArray;
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JSONArray itemIdentifier = (JSONArray) jsonObjectRow.get("ItemIdentifier");
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for (Object identifier : itemIdentifier) {
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JSONObject opendoar = (JSONObject) identifier;
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if (opendoar.get("Type").toString().equals("OpenDOAR")) {
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i++;
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opendoarsToVisit.add(opendoar.get("Value").toString());
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break;
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}
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}
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// break;
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}
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logger.info("(getIrusRRReport) Found the following opendoars for download: " + opendoarsToVisit);
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if (ExecuteWorkflow.irusNumberOfOpendoarsToDownload > 0 &&
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ExecuteWorkflow.irusNumberOfOpendoarsToDownload <= opendoarsToVisit.size()) {
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logger.info("Trimming siteIds list to the size of: " + ExecuteWorkflow.irusNumberOfOpendoarsToDownload);
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opendoarsToVisit = opendoarsToVisit.subList(0, ExecuteWorkflow.irusNumberOfOpendoarsToDownload);
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}
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logger.info("(getIrusRRReport) Downloading the followins opendoars: " + opendoarsToVisit);
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for (String opendoar : opendoarsToVisit) {
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logger.info("Now working on openDoar: " + opendoar);
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this.getIrusIRReport(opendoar, irusUKReportPath);
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}
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logger.info("(getIrusRRReport) Finished with report: " + reportUrl);
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}
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private void getIrusIRReport(String opendoar, String irusUKReportPath) throws Exception {
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logger.info("(getIrusIRReport) Getting report(s) with opendoar: " + opendoar);
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ConnectDB.getHiveConnection().setAutoCommit(false);
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|
SimpleDateFormat simpleDateFormat = new SimpleDateFormat("YYYY-MM");
|
|
|
|
|
|
|
|
|
|
// Setting the starting period
|
|
|
|
|
Calendar start = (Calendar) ExecuteWorkflow.startingLogPeriod.clone();
|
|
|
|
|
logger.info("(getIrusIRReport) Starting period for log download: " + simpleDateFormat.format(start.getTime()));
|
|
|
|
|
|
|
|
|
|
// Setting the ending period (last day of the month)
|
|
|
|
|
Calendar end = (Calendar) ExecuteWorkflow.endingLogPeriod.clone();
|
|
|
|
|
end.add(Calendar.MONTH, +1);
|
|
|
|
|
end.add(Calendar.DAY_OF_MONTH, -1);
|
|
|
|
|
logger.info("(getIrusIRReport) Ending period for log download: " + simpleDateFormat.format(end.getTime()));
|
|
|
|
|
|
|
|
|
|
SimpleDateFormat sdf = new SimpleDateFormat("yyyy-MM-dd");
|
|
|
|
|
PreparedStatement st = ConnectDB
|
|
|
|
|
.getHiveConnection()
|
|
|
|
|
.prepareStatement(
|
|
|
|
|
"SELECT max(date) FROM " + ConnectDB.getUsageStatsDBSchema() + ".sushilog WHERE repository=?");
|
|
|
|
|
st.setString(1, "opendoar____::" + opendoar);
|
|
|
|
|
ResultSet rs_date = st.executeQuery();
|
|
|
|
|
while (rs_date.next()) {
|
|
|
|
|
if (rs_date.getString(1) != null && !rs_date.getString(1).equals("null")
|
|
|
|
|
&& !rs_date.getString(1).equals("")) {
|
|
|
|
|
start.setTime(sdf.parse(rs_date.getString(1)));
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
rs_date.close();
|
|
|
|
|
int batch_size = 0;
|
|
|
|
|
|
|
|
|
|
while (start.before(end)) {
|
|
|
|
|
// log.info("date: " + simpleDateFormat.format(start.getTime()));
|
|
|
|
|
String reportUrl = this.irusUKURL + "GetReport/?Report=IR1&Release=4&RequestorID=OpenAIRE&BeginDate="
|
|
|
|
|
+ simpleDateFormat.format(start.getTime()) + "&EndDate=" + simpleDateFormat.format(start.getTime())
|
|
|
|
|
+ "&RepositoryIdentifier=opendoar%3A" + opendoar
|
|
|
|
|
+ "&ItemIdentifier=&ItemDataType=&hasDOI=&Granularity=Monthly&Callback=";
|
|
|
|
|
start.add(Calendar.MONTH, 1);
|
|
|
|
|
|
|
|
|
|
logger.info("Downloading file: " + reportUrl);
|
|
|
|
|
String text = getJson(reportUrl, "", "");
|
|
|
|
|
if (text == null) {
|
|
|
|
|
continue;
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
FileSystem fs = FileSystem.get(new Configuration());
|
|
|
|
|
String filePath = irusUKReportPath + "/" + "IrusIRReport_" +
|
|
|
|
|
opendoar + "_" + simpleDateFormat.format(start.getTime()) + ".json";
|
|
|
|
|
logger.info("Storing to file: " + filePath);
|
|
|
|
|
FSDataOutputStream fin = fs.create(new Path(filePath), true);
|
|
|
|
|
|
|
|
|
|
JSONParser parser = new JSONParser();
|
|
|
|
|
JSONObject jsonObject = (JSONObject) parser.parse(text);
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("ReportResponse");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Report");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Report");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Customer");
|
|
|
|
|
JSONArray jsonArray = (JSONArray) jsonObject.get("ReportItems");
|
|
|
|
|
if (jsonArray == null) {
|
|
|
|
|
continue;
|
|
|
|
|
}
|
|
|
|
|
String oai = "";
|
|
|
|
|
for (Object aJsonArray : jsonArray) {
|
|
|
|
|
JSONObject jsonObjectRow = (JSONObject) aJsonArray;
|
|
|
|
|
fin.write(jsonObjectRow.toJSONString().getBytes());
|
|
|
|
|
fin.writeChar('\n');
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
fin.close();
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
ConnectDB.getHiveConnection().close();
|
|
|
|
|
|
|
|
|
|
logger.info("(getIrusIRReport) Finished downloading report(s) with opendoar: " + opendoar);
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
private String getJson(String url) throws Exception {
|
|
|
|
|
try {
|
|
|
|
|
System.out.println("===> Connecting to: " + url);
|
|
|
|
|
URL website = new URL(url);
|
|
|
|
|
System.out.println("Connection url -----> " + url);
|
|
|
|
|
URLConnection connection = website.openConnection();
|
|
|
|
|
|
|
|
|
|
// connection.setRequestProperty ("Authorization", "Basic "+encoded);
|
|
|
|
|
StringBuilder response;
|
|
|
|
|
try (BufferedReader in = new BufferedReader(new InputStreamReader(connection.getInputStream()))) {
|
|
|
|
|
response = new StringBuilder();
|
|
|
|
|
String inputLine;
|
|
|
|
|
while ((inputLine = in.readLine()) != null) {
|
|
|
|
|
response.append(inputLine);
|
|
|
|
|
public void processIrusStats() throws Exception {
|
|
|
|
|
Statement stmt = ConnectDB.getHiveConnection().createStatement();
|
|
|
|
|
ConnectDB.getHiveConnection().setAutoCommit(false);
|
|
|
|
|
|
|
|
|
|
logger.info("Adding JSON Serde jar");
|
|
|
|
|
stmt.executeUpdate("add jar /usr/share/cmf/common_jars/hive-hcatalog-core-1.1.0-cdh5.14.0.jar");
|
|
|
|
|
logger.info("Added JSON Serde jar");
|
|
|
|
|
|
|
|
|
|
logger.info("Dropping sushilogtmp_json table");
|
|
|
|
|
String dropSushilogtmpJson = "DROP TABLE IF EXISTS "
|
|
|
|
|
+ ConnectDB.getUsageStatsDBSchema()
|
|
|
|
|
+ ".sushilogtmp_json";
|
|
|
|
|
stmt.executeUpdate(dropSushilogtmpJson);
|
|
|
|
|
logger.info("Dropped sushilogtmp_json table");
|
|
|
|
|
|
|
|
|
|
logger.info("Creating irus_sushilogtmp_json table");
|
|
|
|
|
String createSushilogtmpJson = "CREATE EXTERNAL TABLE IF NOT EXISTS "
|
|
|
|
|
+ ConnectDB.getUsageStatsDBSchema() + ".irus_sushilogtmp_json(\n"
|
|
|
|
|
+ " `ItemIdentifier` ARRAY<\n"
|
|
|
|
|
+ " struct<\n"
|
|
|
|
|
+ " Type: STRING,\n"
|
|
|
|
|
+ " Value: STRING\n"
|
|
|
|
|
+ " >\n"
|
|
|
|
|
+ " >,\n"
|
|
|
|
|
+ " `ItemPerformance` ARRAY<\n"
|
|
|
|
|
+ " struct<\n"
|
|
|
|
|
+ " `Period`: struct<\n"
|
|
|
|
|
+ " `Begin`: STRING,\n"
|
|
|
|
|
+ " `End`: STRING\n"
|
|
|
|
|
+ " >,\n"
|
|
|
|
|
+ " `Instance`: struct<\n"
|
|
|
|
|
+ " `Count`: STRING,\n"
|
|
|
|
|
+ " `MetricType`: STRING\n"
|
|
|
|
|
+ " >\n"
|
|
|
|
|
+ " >\n"
|
|
|
|
|
+ " >\n"
|
|
|
|
|
+ ")\n"
|
|
|
|
|
+ "ROW FORMAT SERDE 'org.apache.hive.hcatalog.data.JsonSerDe'\n"
|
|
|
|
|
+ "LOCATION '" + ExecuteWorkflow.irusUKReportPath + "'\n"
|
|
|
|
|
+ "TBLPROPERTIES (\"transactional\"=\"false\")";
|
|
|
|
|
stmt.executeUpdate(createSushilogtmpJson);
|
|
|
|
|
logger.info("Created irus_sushilogtmp_json table");
|
|
|
|
|
|
|
|
|
|
logger.info("Dropping irus_sushilogtmp table");
|
|
|
|
|
String dropSushilogtmp = "DROP TABLE IF EXISTS "
|
|
|
|
|
+ ConnectDB.getUsageStatsDBSchema()
|
|
|
|
|
+ ".irus_sushilogtmp";
|
|
|
|
|
stmt.executeUpdate(dropSushilogtmp);
|
|
|
|
|
logger.info("Dropped irus_sushilogtmp table");
|
|
|
|
|
|
|
|
|
|
logger.info("Creating irus_sushilogtmp table");
|
|
|
|
|
String createSushilogtmp = "CREATE TABLE " + ConnectDB.getUsageStatsDBSchema()
|
|
|
|
|
+ ".irus_sushilogtmp(source STRING, repository STRING, "
|
|
|
|
|
+ "rid STRING, date STRING, metric_type STRING, count INT) clustered by (source) into 100 buckets stored as orc "
|
|
|
|
|
+ "tblproperties('transactional'='true')";
|
|
|
|
|
stmt.executeUpdate(createSushilogtmp);
|
|
|
|
|
logger.info("Created irus_sushilogtmp table");
|
|
|
|
|
|
|
|
|
|
logger.info("Inserting to irus_sushilogtmp table");
|
|
|
|
|
String insertSushilogtmp = "INSERT INTO " + ConnectDB.getUsageStatsDBSchema() + ".irus_sushilogtmp "
|
|
|
|
|
+ "SELECT 'IRUS-UK', CONCAT('opendoar____::', split(split(INPUT__FILE__NAME,'IrusIRReport_')[1],'_')[0]), "
|
|
|
|
|
+ "`ItemIdent`.`Value`, `ItemPerf`.`Period`.`Begin`, "
|
|
|
|
|
+ "`ItemPerf`.`Instance`.`MetricType`, `ItemPerf`.`Instance`.`Count` "
|
|
|
|
|
+ "FROM " + ConnectDB.getUsageStatsDBSchema() + ".irus_sushilogtmp_json "
|
|
|
|
|
+ "LATERAL VIEW posexplode(ItemIdentifier) ItemIdentifierTable AS seqi, ItemIdent "
|
|
|
|
|
+ "LATERAL VIEW posexplode(ItemPerformance) ItemPerformanceTable AS seqp, ItemPerf "
|
|
|
|
|
+ "WHERE `ItemIdent`.`Type`= 'OAI'";
|
|
|
|
|
stmt.executeUpdate(insertSushilogtmp);
|
|
|
|
|
logger.info("Inserted to irus_sushilogtmp table");
|
|
|
|
|
|
|
|
|
|
logger.info("Creating downloads_stats table");
|
|
|
|
|
String createDownloadsStats = "CREATE TABLE IF NOT EXISTS " + ConnectDB.getUsageStatsDBSchema()
|
|
|
|
|
+ ".downloads_stats "
|
|
|
|
|
+ "(`source` string, "
|
|
|
|
|
+ "`repository_id` string, "
|
|
|
|
|
+ "`result_id` string, "
|
|
|
|
|
+ "`date` string, "
|
|
|
|
|
+ "`count` bigint, "
|
|
|
|
|
+ "`openaire` bigint)";
|
|
|
|
|
stmt.executeUpdate(createDownloadsStats);
|
|
|
|
|
logger.info("Created downloads_stats table");
|
|
|
|
|
|
|
|
|
|
logger.info("Inserting into downloads_stats");
|
|
|
|
|
String insertDStats = "INSERT INTO " + ConnectDB.getUsageStatsDBSchema() + ".downloads_stats "
|
|
|
|
|
+ "SELECT s.source, d.id AS repository_id, "
|
|
|
|
|
+ "ro.id as result_id, CONCAT(YEAR(date), '/', LPAD(MONTH(date), 2, '0')) as date, s.count, '0' "
|
|
|
|
|
+ "FROM " + ConnectDB.getUsageStatsDBSchema() + ".irus_sushilogtmp s, "
|
|
|
|
|
+ ConnectDB.getStatsDBSchema() + ".datasource_oids d, "
|
|
|
|
|
+ ConnectDB.getStatsDBSchema() + ".result_oids ro "
|
|
|
|
|
+ "WHERE s.repository=d.oid AND s.rid=ro.oid AND metric_type='ft_total' AND s.source='IRUS-UK'";
|
|
|
|
|
stmt.executeUpdate(insertDStats);
|
|
|
|
|
logger.info("Inserted into downloads_stats");
|
|
|
|
|
|
|
|
|
|
logger.info("Creating sushilog table");
|
|
|
|
|
String createSushilog = "CREATE TABLE IF NOT EXISTS " + ConnectDB.getUsageStatsDBSchema()
|
|
|
|
|
+ ".sushilog "
|
|
|
|
|
+ "(`source` string, "
|
|
|
|
|
+ "`repository_id` string, "
|
|
|
|
|
+ "`rid` string, "
|
|
|
|
|
+ "`date` string, "
|
|
|
|
|
+ "`metric_type` string, "
|
|
|
|
|
+ "`count` int)";
|
|
|
|
|
stmt.executeUpdate(createSushilog);
|
|
|
|
|
logger.info("Created sushilog table");
|
|
|
|
|
|
|
|
|
|
logger.info("Inserting to sushilog table");
|
|
|
|
|
String insertToShushilog = "INSERT INTO " + ConnectDB.getUsageStatsDBSchema() + ".sushilog SELECT * FROM "
|
|
|
|
|
+ ConnectDB.getUsageStatsDBSchema()
|
|
|
|
|
+ ".irus_sushilogtmp";
|
|
|
|
|
stmt.executeUpdate(insertToShushilog);
|
|
|
|
|
logger.info("Inserted to sushilog table");
|
|
|
|
|
|
|
|
|
|
ConnectDB.getHiveConnection().close();
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
public void getIrusRRReport(String irusUKReportPath) throws Exception {
|
|
|
|
|
SimpleDateFormat sdf = new SimpleDateFormat("YYYY-MM");
|
|
|
|
|
// Setting the starting period
|
|
|
|
|
Calendar start = (Calendar) ExecuteWorkflow.startingLogPeriod.clone();
|
|
|
|
|
logger.info("(getIrusRRReport) Starting period for log download: " + sdf.format(start.getTime()));
|
|
|
|
|
|
|
|
|
|
// Setting the ending period (last day of the month)
|
|
|
|
|
Calendar end = (Calendar) ExecuteWorkflow.endingLogPeriod.clone();
|
|
|
|
|
end.add(Calendar.MONTH, +1);
|
|
|
|
|
end.add(Calendar.DAY_OF_MONTH, -1);
|
|
|
|
|
logger.info("(getIrusRRReport) Ending period for log download: " + sdf.format(end.getTime()));
|
|
|
|
|
|
|
|
|
|
String reportUrl = irusUKURL + "GetReport/?Report=RR1&Release=4&RequestorID=OpenAIRE&BeginDate="
|
|
|
|
|
+ sdf.format(start.getTime()) + "&EndDate=" + sdf.format(end.getTime())
|
|
|
|
|
+ "&RepositoryIdentifier=&ItemDataType=&NewJiscBand=&Granularity=Monthly&Callback=";
|
|
|
|
|
|
|
|
|
|
logger.info("(getIrusRRReport) Getting report: " + reportUrl);
|
|
|
|
|
|
|
|
|
|
String text = getJson(reportUrl, "", "");
|
|
|
|
|
|
|
|
|
|
List<String> opendoarsToVisit = new ArrayList<String>();
|
|
|
|
|
JSONParser parser = new JSONParser();
|
|
|
|
|
JSONObject jsonObject = (JSONObject) parser.parse(text);
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("ReportResponse");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Report");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Report");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Customer");
|
|
|
|
|
JSONArray jsonArray = (JSONArray) jsonObject.get("ReportItems");
|
|
|
|
|
int i = 0;
|
|
|
|
|
for (Object aJsonArray : jsonArray) {
|
|
|
|
|
JSONObject jsonObjectRow = (JSONObject) aJsonArray;
|
|
|
|
|
JSONArray itemIdentifier = (JSONArray) jsonObjectRow.get("ItemIdentifier");
|
|
|
|
|
for (Object identifier : itemIdentifier) {
|
|
|
|
|
JSONObject opendoar = (JSONObject) identifier;
|
|
|
|
|
if (opendoar.get("Type").toString().equals("OpenDOAR")) {
|
|
|
|
|
i++;
|
|
|
|
|
opendoarsToVisit.add(opendoar.get("Value").toString());
|
|
|
|
|
break;
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
// break;
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
logger.info("(getIrusRRReport) Found the following opendoars for download: " + opendoarsToVisit);
|
|
|
|
|
|
|
|
|
|
if (ExecuteWorkflow.irusNumberOfOpendoarsToDownload > 0
|
|
|
|
|
&& ExecuteWorkflow.irusNumberOfOpendoarsToDownload <= opendoarsToVisit.size()) {
|
|
|
|
|
logger.info("Trimming siteIds list to the size of: " + ExecuteWorkflow.irusNumberOfOpendoarsToDownload);
|
|
|
|
|
opendoarsToVisit = opendoarsToVisit.subList(0, ExecuteWorkflow.irusNumberOfOpendoarsToDownload);
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
logger.info("(getIrusRRReport) Downloading the followins opendoars: " + opendoarsToVisit);
|
|
|
|
|
|
|
|
|
|
for (String opendoar : opendoarsToVisit) {
|
|
|
|
|
logger.info("Now working on openDoar: " + opendoar);
|
|
|
|
|
this.getIrusIRReport(opendoar, irusUKReportPath);
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
logger.info("(getIrusRRReport) Finished with report: " + reportUrl);
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
private void getIrusIRReport(String opendoar, String irusUKReportPath) throws Exception {
|
|
|
|
|
|
|
|
|
|
logger.info("(getIrusIRReport) Getting report(s) with opendoar: " + opendoar);
|
|
|
|
|
|
|
|
|
|
ConnectDB.getHiveConnection().setAutoCommit(false);
|
|
|
|
|
|
|
|
|
|
SimpleDateFormat simpleDateFormat = new SimpleDateFormat("YYYY-MM");
|
|
|
|
|
|
|
|
|
|
// Setting the starting period
|
|
|
|
|
Calendar start = (Calendar) ExecuteWorkflow.startingLogPeriod.clone();
|
|
|
|
|
logger.info("(getIrusIRReport) Starting period for log download: " + simpleDateFormat.format(start.getTime()));
|
|
|
|
|
|
|
|
|
|
// Setting the ending period (last day of the month)
|
|
|
|
|
Calendar end = (Calendar) ExecuteWorkflow.endingLogPeriod.clone();
|
|
|
|
|
end.add(Calendar.MONTH, +1);
|
|
|
|
|
end.add(Calendar.DAY_OF_MONTH, -1);
|
|
|
|
|
logger.info("(getIrusIRReport) Ending period for log download: " + simpleDateFormat.format(end.getTime()));
|
|
|
|
|
|
|
|
|
|
SimpleDateFormat sdf = new SimpleDateFormat("yyyy-MM-dd");
|
|
|
|
|
PreparedStatement st = ConnectDB
|
|
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.getHiveConnection()
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.prepareStatement(
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"SELECT max(date) FROM " + ConnectDB.getUsageStatsDBSchema() + ".sushilog WHERE repository=?");
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st.setString(1, "opendoar____::" + opendoar);
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ResultSet rs_date = st.executeQuery();
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Date dateMax = null;
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while (rs_date.next()) {
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if (rs_date.getString(1) != null && !rs_date.getString(1).equals("null")
|
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|
&& !rs_date.getString(1).equals("")) {
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start.setTime(sdf.parse(rs_date.getString(1)));
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dateMax = sdf.parse(rs_date.getString(1));
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}
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}
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rs_date.close();
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|
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int batch_size = 0;
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|
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if (dateMax != null && start.getTime().compareTo(dateMax) <= 0) {
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logger.info("Date found in logs " + dateMax + " and not downloanding logs for " + opendoar);
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|
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} else {
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|
|
|
while (start.before(end)) {
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|
|
logger.info("date: " + simpleDateFormat.format(start.getTime()));
|
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|
|
|
String reportUrl = this.irusUKURL + "GetReport/?Report=IR1&Release=4&RequestorID=OpenAIRE&BeginDate="
|
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|
|
|
+ simpleDateFormat.format(start.getTime()) + "&EndDate=" + simpleDateFormat.format(start.getTime())
|
|
|
|
|
+ "&RepositoryIdentifier=opendoar%3A" + opendoar
|
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|
|
+ "&ItemIdentifier=&ItemDataType=&hasDOI=&Granularity=Monthly&Callback=";
|
|
|
|
|
start.add(Calendar.MONTH, 1);
|
|
|
|
|
|
|
|
|
|
logger.info("Downloading file: " + reportUrl);
|
|
|
|
|
String text = getJson(reportUrl, "", "");
|
|
|
|
|
if (text == null) {
|
|
|
|
|
continue;
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
FileSystem fs = FileSystem.get(new Configuration());
|
|
|
|
|
String filePath = irusUKReportPath + "/" + "IrusIRReport_"
|
|
|
|
|
+ opendoar + "_" + simpleDateFormat.format(start.getTime()) + ".json";
|
|
|
|
|
logger.info("Storing to file: " + filePath);
|
|
|
|
|
FSDataOutputStream fin = fs.create(new Path(filePath), true);
|
|
|
|
|
|
|
|
|
|
JSONParser parser = new JSONParser();
|
|
|
|
|
JSONObject jsonObject = (JSONObject) parser.parse(text);
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("ReportResponse");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Report");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Report");
|
|
|
|
|
jsonObject = (JSONObject) jsonObject.get("Customer");
|
|
|
|
|
JSONArray jsonArray = (JSONArray) jsonObject.get("ReportItems");
|
|
|
|
|
if (jsonArray == null) {
|
|
|
|
|
continue;
|
|
|
|
|
}
|
|
|
|
|
String oai = "";
|
|
|
|
|
for (Object aJsonArray : jsonArray) {
|
|
|
|
|
JSONObject jsonObjectRow = (JSONObject) aJsonArray;
|
|
|
|
|
fin.write(jsonObjectRow.toJSONString().getBytes());
|
|
|
|
|
fin.writeChar('\n');
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
fin.close();
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
//ConnectDB.getHiveConnection().close();
|
|
|
|
|
|
|
|
|
|
logger.info("(getIrusIRReport) Finished downloading report(s) with opendoar: " + opendoar);
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
private String getJson(String url) throws Exception {
|
|
|
|
|
try {
|
|
|
|
|
System.out.println("===> Connecting to: " + url);
|
|
|
|
|
URL website = new URL(url);
|
|
|
|
|
System.out.println("Connection url -----> " + url);
|
|
|
|
|
URLConnection connection = website.openConnection();
|
|
|
|
|
|
|
|
|
|
// connection.setRequestProperty ("Authorization", "Basic "+encoded);
|
|
|
|
|
StringBuilder response;
|
|
|
|
|
try (BufferedReader in = new BufferedReader(new InputStreamReader(connection.getInputStream()))) {
|
|
|
|
|
response = new StringBuilder();
|
|
|
|
|
String inputLine;
|
|
|
|
|
while ((inputLine = in.readLine()) != null) {
|
|
|
|
|
response.append(inputLine);
|
|
|
|
|
// response.append("\n");
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
System.out.println("response ====> " + response.toString());
|
|
|
|
|
|
|
|
|
|
return response.toString();
|
|
|
|
|
} catch (Exception e) {
|
|
|
|
|
logger.error("Failed to get URL: " + e);
|
|
|
|
|
System.out.println("Failed to get URL: " + e);
|
|
|
|
|
throw new Exception("Failed to get URL: " + e.toString(), e);
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
private String getJson(String url, String username, String password) throws Exception {
|
|
|
|
|
// String cred=username+":"+password;
|
|
|
|
|
// String encoded = new sun.misc.BASE64Encoder().encode (cred.getBytes());
|
|
|
|
|
try {
|
|
|
|
|
URL website = new URL(url);
|
|
|
|
|
URLConnection connection = website.openConnection();
|
|
|
|
|
// connection.setRequestProperty ("Authorization", "Basic "+encoded);
|
|
|
|
|
StringBuilder response;
|
|
|
|
|
try (BufferedReader in = new BufferedReader(new InputStreamReader(connection.getInputStream()))) {
|
|
|
|
|
response = new StringBuilder();
|
|
|
|
|
String inputLine;
|
|
|
|
|
while ((inputLine = in.readLine()) != null) {
|
|
|
|
|
response.append(inputLine);
|
|
|
|
|
response.append("\n");
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
return response.toString();
|
|
|
|
|
} catch (Exception e) {
|
|
|
|
|
logger.error("Failed to get URL", e);
|
|
|
|
|
return null;
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
System.out.println("response ====> " + response.toString());
|
|
|
|
|
|
|
|
|
|
return response.toString();
|
|
|
|
|
} catch (Exception e) {
|
|
|
|
|
logger.error("Failed to get URL: " + e);
|
|
|
|
|
System.out.println("Failed to get URL: " + e);
|
|
|
|
|
throw new Exception("Failed to get URL: " + e.toString(), e);
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
private String getJson(String url, String username, String password) throws Exception {
|
|
|
|
|
// String cred=username+":"+password;
|
|
|
|
|
// String encoded = new sun.misc.BASE64Encoder().encode (cred.getBytes());
|
|
|
|
|
try {
|
|
|
|
|
URL website = new URL(url);
|
|
|
|
|
URLConnection connection = website.openConnection();
|
|
|
|
|
// connection.setRequestProperty ("Authorization", "Basic "+encoded);
|
|
|
|
|
StringBuilder response;
|
|
|
|
|
try (BufferedReader in = new BufferedReader(new InputStreamReader(connection.getInputStream()))) {
|
|
|
|
|
response = new StringBuilder();
|
|
|
|
|
String inputLine;
|
|
|
|
|
while ((inputLine = in.readLine()) != null) {
|
|
|
|
|
response.append(inputLine);
|
|
|
|
|
response.append("\n");
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
return response.toString();
|
|
|
|
|
} catch (Exception e) {
|
|
|
|
|
logger.error("Failed to get URL", e);
|
|
|
|
|
return null;
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
Dimitris
4 years ago