code formatting
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@ -5,13 +5,13 @@ import java.util.*;
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import java.util.function.Function;
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import java.util.function.Function;
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import java.util.stream.Collectors;
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import java.util.stream.Collectors;
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import com.google.common.collect.Sets;
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import eu.dnetlib.dhp.schema.oaf.utils.PidBlacklistProvider;
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import org.apache.commons.lang3.StringUtils;
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import org.apache.commons.lang3.StringUtils;
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import com.clearspring.analytics.util.Lists;
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import com.clearspring.analytics.util.Lists;
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import com.google.common.collect.Sets;
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import eu.dnetlib.dhp.schema.common.ModelConstants;
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import eu.dnetlib.dhp.schema.common.ModelConstants;
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import eu.dnetlib.dhp.schema.oaf.utils.PidBlacklistProvider;
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public class CleaningFunctions {
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public class CleaningFunctions {
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@ -148,16 +148,18 @@ public class CleaningFunctions {
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}
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}
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if (Objects.nonNull(r.getInstance())) {
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if (Objects.nonNull(r.getInstance())) {
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for (Instance i : r.getInstance()) {
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for (Instance i : r.getInstance()) {
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final Set<StructuredProperty> pids = Sets.newHashSet(i.getPid());
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final Set<StructuredProperty> pids = Sets.newHashSet(i.getPid());
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i.setAlternateIdentifier(
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i
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Optional.ofNullable(i.getAlternateIdentifier())
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.setAlternateIdentifier(
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.map(altId -> altId.stream()
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Optional
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.filter(p -> !pids.contains(p))
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.ofNullable(i.getAlternateIdentifier())
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.collect(Collectors.toList()))
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.map(
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.orElse(Lists.newArrayList()));
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altId -> altId
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.stream()
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.filter(p -> !pids.contains(p))
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.collect(Collectors.toList()))
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.orElse(Lists.newArrayList()));
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if (Objects.isNull(i.getAccessright()) || StringUtils.isBlank(i.getAccessright().getClassid())) {
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if (Objects.isNull(i.getAccessright()) || StringUtils.isBlank(i.getAccessright().getClassid())) {
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i
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i
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@ -236,7 +238,8 @@ public class CleaningFunctions {
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}
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}
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private static List<StructuredProperty> processPidCleaning(List<StructuredProperty> pids) {
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private static List<StructuredProperty> processPidCleaning(List<StructuredProperty> pids) {
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return pids.stream()
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return pids
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.stream()
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.filter(Objects::nonNull)
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.filter(Objects::nonNull)
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.filter(sp -> StringUtils.isNotBlank(StringUtils.trim(sp.getValue())))
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.filter(sp -> StringUtils.isNotBlank(StringUtils.trim(sp.getValue())))
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.filter(sp -> !PID_BLACKLIST.contains(sp.getValue().trim().toLowerCase()))
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.filter(sp -> !PID_BLACKLIST.contains(sp.getValue().trim().toLowerCase()))
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@ -286,8 +289,8 @@ public class CleaningFunctions {
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public static boolean pidFilter(StructuredProperty s) {
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public static boolean pidFilter(StructuredProperty s) {
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final String pidValue = s.getValue();
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final String pidValue = s.getValue();
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if (Objects.isNull(s.getQualifier()) ||
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if (Objects.isNull(s.getQualifier()) ||
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StringUtils.isBlank(pidValue) ||
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StringUtils.isBlank(pidValue) ||
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StringUtils.isBlank(pidValue.replaceAll("(?:\\n|\\r|\\t|\\s)", ""))) {
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StringUtils.isBlank(pidValue.replaceAll("(?:\\n|\\r|\\t|\\s)", ""))) {
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return false;
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return false;
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}
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}
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if (CleaningFunctions.PID_BLACKLIST.contains(pidValue)) {
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if (CleaningFunctions.PID_BLACKLIST.contains(pidValue)) {
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@ -71,7 +71,7 @@ public class IdentifierFactory implements Serializable {
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.stream()
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.stream()
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.filter(Objects::nonNull)
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.filter(Objects::nonNull)
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.filter(s -> s.getQualifier() != null && "doi".equalsIgnoreCase(s.getQualifier().getClassid()))
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.filter(s -> s.getQualifier() != null && "doi".equalsIgnoreCase(s.getQualifier().getClassid()))
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.filter(IdentifierFactory::pidFilter)
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.filter(CleaningFunctions::pidFilter)
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.findAny()
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.findAny()
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.orElse(null);
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.orElse(null);
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} else {
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} else {
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@ -81,7 +81,7 @@ public class IdentifierFactory implements Serializable {
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.stream()
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.stream()
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.filter(i -> i.getPid() != null)
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.filter(i -> i.getPid() != null)
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.flatMap(i -> i.getPid().stream())
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.flatMap(i -> i.getPid().stream())
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.filter(IdentifierFactory::pidFilter)
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.filter(CleaningFunctions::pidFilter)
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.findAny()
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.findAny()
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.orElse(null);
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.orElse(null);
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}
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}
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