Merge pull request '[stats wf] latest version of indicators + added FOS classification' (#232) from antonis.lempesis/dnet-hadoop:beta into beta
Reviewed-on: #232
This commit is contained in:
commit
27681cf6bf
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@ -1,4 +1,4 @@
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---- Sprint 1 ----
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-- Sprint 1 ----
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create table indi_pub_green_oa stored as parquet as
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select distinct p.id, coalesce(green_oa, 0) as green_oa
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from publication p
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@ -22,7 +22,8 @@ select p.id, 1 as grey_lit
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from publication p
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join result_classifications rt on rt.id = p.id
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where rt.type not in ('Article','Part of book or chapter of book','Book','Doctoral thesis','Master thesis','Data Paper', 'Thesis', 'Bachelor thesis', 'Conference object') and
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not exists (select 1 from result_classifications rc where type ='Other literature type' and rc.id=p.id)) tmp on p.id=tmp.id;
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not exists (select 1 from result_classifications rc where type ='Other literature type'
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and rc.id=p.id)) tmp on p.id=tmp.id;
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compute stats indi_pub_grey_lit;
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@ -36,7 +37,8 @@ where pidtype='Digital Object Identifier' and d.name ='Crossref') tmp
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on tmp.id=p.id;
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compute stats indi_pub_doi_from_crossref;
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---- Sprint 2 ----
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-- Sprint 2 ----
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create table indi_result_has_cc_licence stored as parquet as
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select distinct r.id, (case when lic='' or lic is null then 0 else 1 end) as has_cc_license
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from result r
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@ -82,31 +84,61 @@ on r.id= tmp.id;
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compute stats indi_funded_result_with_fundref;
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-- create table indi_result_org_country_collab stored as parquet as
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-- with tmp as
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-- (select o.id as id, o.country , ro.id as result,r.type from organization o
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-- join result_organization ro on o.id=ro.organization
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-- join result r on r.id=ro.id where o.country <> 'UNKNOWN')
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-- select o1.id org1,o2.country country2, o1.type, count(distinct o1.result) as collaborations
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-- from tmp as o1
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-- join tmp as o2 on o1.result=o2.result
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-- where o1.id<>o2.id and o1.country<>o2.country
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-- group by o1.id, o1.type,o2.country;
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--
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-- compute stats indi_result_org_country_collab;
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create table indi_result_org_collab stored as parquet as
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select o1.organization org1, o2.organization org2, count(distinct o1.id) as collaborations
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from result_organization as o1
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join result_organization as o2 on o1.id=o2.id and o1.organization!=o2.organization
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group by o1.organization, o2.organization;
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-- create table indi_result_org_collab stored as parquet as
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-- with tmp as
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-- (select o.id, ro.id as result,r.type from organization o
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-- join result_organization ro on o.id=ro.organization
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-- join result r on r.id=ro.id)
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-- select o1.id org1,o2.id org2, o1.type, count(distinct o1.result) as collaborations
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-- from tmp as o1
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-- join tmp as o2 on o1.result=o2.result
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-- where o1.id<>o2.id
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-- group by o1.id, o2.id, o1.type;
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--
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-- compute stats indi_result_org_collab;
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compute stats indi_result_org_collab;
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create table indi_result_org_country_collab stored as parquet as
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with tmp as
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(select o.id as id, o.country , ro.id as result,r.type from organization o
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join result_organization ro on o.id=ro.organization
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join result r on r.id=ro.id where o.country <> 'UNKNOWN')
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select o1.id org1,o2.country country2, o1.type, count(distinct o1.result) as collaborations
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from tmp as o1
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join tmp as o2 on o1.result=o2.result
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where o1.id<>o2.id and o1.country<>o2.country
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group by o1.id, o1.type,o2.country;
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compute stats indi_result_org_country_collab;
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create table indi_result_org_collab stored as parquet as
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with tmp as
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(select o.id, ro.id as result,r.type from organization o
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join result_organization ro on o.id=ro.organization
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join result r on r.id=ro.id)
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select o1.id org1,o2.id org2, o1.type, count(distinct o1.result) as collaborations
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from tmp as o1
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join tmp as o2 on o1.result=o2.result
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where o1.id<>o2.id
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group by o1.id, o2.id, o1.type;
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compute stats indi_result_org_collab;
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create table indi_project_collab_org stored as parquet as
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select o1.id org1,o2.id org2, count(distinct o1.project) as collaborations
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from organization_projects as o1
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join organization_projects as o2 on o1.project=o2.project
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where o1.id!=o2.id
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group by o1.id, o2.id;
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compute stats indi_project_collab_org;
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create table indi_project_collab_org_country stored as parquet as
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with tmp as
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(select o.id organization, o.country , ro.project as project from organization o
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join organization_projects ro on o.id=ro.id
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and o.country <> 'UNKNOWN')
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select o1.organization org1,o2.country country2, count(distinct o1.project) as collaborations
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from tmp as o1
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join tmp as o2 on o1.project=o2.project
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where o1.organization<>o2.organization and o1.country<>o2.country
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group by o1.organization, o2.country;
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compute stats indi_project_collab_org_country;
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create table indi_funder_country_collab stored as parquet as
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with tmp as (select funder, project, country from organization_projects op
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@ -125,7 +157,7 @@ create table indi_result_country_collab stored as parquet as
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with tmp as
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(select country, ro.id as result,r.type from organization o
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join result_organization ro on o.id=ro.organization
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join result r on r.id=ro.id)
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join result r on r.id=ro.id where country <> 'UNKNOWN')
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select o1.country country1, o2.country country2, o1.type, count(distinct o1.result) as collaborations
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from tmp as o1
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join tmp as o2 on o1.result=o2.result
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@ -182,176 +214,178 @@ where d.type like '%Journal%' and ri.accessright='Closed Access' and
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on tmp.id=ri.id;
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compute stats indi_pub_closed_other_open;
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---- Sprint 5 ----
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create table indi_result_no_of_copies stored as parquet as
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select id, count(id) as number_of_copies from result_instance group by id;
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compute stats indi_result_no_of_copies;
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---- Sprint 6 ----
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create table indi_pub_gold_oa stored as parquet as
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WITH gold_oa AS (
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SELECT issn_l, journal_is_in_doaj,journal_is_oa, issn_1 as issn
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FROM stats_ext.oa_journals
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WHERE issn_1 != ""
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UNION ALL
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SELECT issn_l, journal_is_in_doaj, journal_is_oa, issn_2 as issn
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FROM stats_ext.oa_journals
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WHERE issn_2 != "" ),
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issn AS (
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SELECT * FROM
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(SELECT id, issn_printed as issn
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FROM datasource WHERE issn_printed IS NOT NULL
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UNION
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SELECT id, issn_online as issn
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FROM datasource WHERE issn_online IS NOT NULL) as issn
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WHERE LENGTH(issn) > 7)
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SELECT DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
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FROM publication_datasources pd
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LEFT OUTER JOIN (
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SELECT pd.id, 1 as is_gold FROM publication_datasources pd
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JOIN issn on issn.id=pd.datasource
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JOIN gold_oa on issn.issn = gold_oa.issn) tmp ON pd.id=tmp.id;
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--create table indi_pub_gold_oa stored as parquet as
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--WITH gold_oa AS (
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-- SELECT issn_l, journal_is_in_doaj,journal_is_oa, issn_1 as issn
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-- FROM stats_ext.oa_journals
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-- WHERE issn_1 != ""
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-- UNION ALL
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-- SELECT issn_l, journal_is_in_doaj, journal_is_oa, issn_2 as issn
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-- FROM stats_ext.oa_journals
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-- WHERE issn_2 != "" ),
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--issn AS (
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-- SELECT * FROM
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-- (SELECT id, issn_printed as issn
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-- FROM datasource WHERE issn_printed IS NOT NULL
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-- UNION
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-- SELECT id, issn_online as issn
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-- FROM datasource WHERE issn_online IS NOT NULL) as issn
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-- WHERE LENGTH(issn) > 7)
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--SELECT DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
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--FROM publication_datasources pd
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--LEFT OUTER JOIN (
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-- SELECT pd.id, 1 as is_gold FROM publication_datasources pd
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-- JOIN issn on issn.id=pd.datasource
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-- JOIN gold_oa on issn.issn = gold_oa.issn) tmp ON pd.id=tmp.id;
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compute stats indi_pub_gold_oa;
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--compute stats indi_pub_gold_oa;
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--
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--create table indi_datasets_gold_oa stored as parquet as
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--WITH gold_oa AS (
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-- SELECT issn_l, journal_is_in_doaj, journal_is_oa, issn_1 as issn
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-- FROM stats_ext.oa_journals
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-- WHERE issn_1 != ""
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-- UNION
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-- ALL SELECT issn_l,journal_is_in_doaj,journal_is_oa,issn_2 as issn
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-- FROM stats_ext.oa_journals
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-- WHERE issn_2 != "" ),
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--issn AS (
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-- SELECT *
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-- FROM (
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-- SELECT id,issn_printed as issn
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-- FROM datasource
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-- WHERE issn_printed IS NOT NULL
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||||
-- UNION
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-- SELECT id, issn_online as issn
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-- FROM datasource
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-- WHERE issn_online IS NOT NULL ) as issn
|
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-- WHERE LENGTH(issn) > 7)
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--SELECT DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
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--FROM dataset_datasources pd
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--LEFT OUTER JOIN (
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-- SELECT pd.id, 1 as is_gold FROM dataset_datasources pd
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-- JOIN issn on issn.id=pd.datasource
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-- JOIN gold_oa on issn.issn = gold_oa.issn) tmp ON pd.id=tmp.id;
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--
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--compute stats indi_datasets_gold_oa;
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create table indi_datasets_gold_oa stored as parquet as
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WITH gold_oa AS (
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SELECT issn_l, journal_is_in_doaj, journal_is_oa, issn_1 as issn
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FROM stats_ext.oa_journals
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WHERE issn_1 != ""
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UNION
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ALL SELECT issn_l,journal_is_in_doaj,journal_is_oa,issn_2 as issn
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FROM stats_ext.oa_journals
|
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WHERE issn_2 != "" ),
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issn AS (
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SELECT *
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FROM (
|
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SELECT id,issn_printed as issn
|
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FROM datasource
|
||||
WHERE issn_printed IS NOT NULL
|
||||
UNION
|
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SELECT id, issn_online as issn
|
||||
FROM datasource
|
||||
WHERE issn_online IS NOT NULL ) as issn
|
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WHERE LENGTH(issn) > 7)
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SELECT DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
|
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FROM dataset_datasources pd
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LEFT OUTER JOIN (
|
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SELECT pd.id, 1 as is_gold FROM dataset_datasources pd
|
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JOIN issn on issn.id=pd.datasource
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JOIN gold_oa on issn.issn = gold_oa.issn) tmp ON pd.id=tmp.id;
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compute stats indi_datasets_gold_oa;
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create table indi_software_gold_oa stored as parquet as
|
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WITH gold_oa AS (
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SELECT issn_l, journal_is_in_doaj, journal_is_oa, issn_1 as issn
|
||||
FROM stats_ext.oa_journals
|
||||
WHERE issn_1 != ""
|
||||
UNION
|
||||
ALL SELECT issn_l,journal_is_in_doaj,journal_is_oa,issn_2 as issn
|
||||
FROM stats_ext.oa_journals
|
||||
WHERE issn_2 != "" ),
|
||||
issn AS (
|
||||
SELECT *
|
||||
FROM (
|
||||
SELECT id,issn_printed as issn
|
||||
FROM datasource
|
||||
WHERE issn_printed IS NOT NULL
|
||||
UNION
|
||||
SELECT id, issn_online as issn
|
||||
FROM datasource
|
||||
WHERE issn_online IS NOT NULL ) as issn
|
||||
WHERE LENGTH(issn) > 7)
|
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SELECT DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
|
||||
FROM software_datasources pd
|
||||
LEFT OUTER JOIN (
|
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SELECT pd.id, 1 as is_gold FROM software_datasources pd
|
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JOIN issn on issn.id=pd.datasource
|
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JOIN gold_oa on issn.issn = gold_oa.issn) tmp ON pd.id=tmp.id;
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compute stats indi_software_gold_oa;
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create table indi_org_findable stored as parquet as
|
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with result_with_pid as (
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select ro.organization organization, count(distinct rp.id) no_result_with_pid from result_organization ro
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||||
join result_pids rp on rp.id=ro.id
|
||||
group by ro.organization),
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result_has_abstract as (
|
||||
select ro.organization organization, count(distinct rp.id) no_result_with_abstract from result_organization ro
|
||||
join result rp on rp.id=ro.id where rp.abstract=true
|
||||
group by ro.organization),
|
||||
allresults as (
|
||||
select organization, count(distinct id) no_allresults from result_organization
|
||||
group by organization),
|
||||
result_with_pid_share as (
|
||||
select allresults.organization, result_with_pid.no_result_with_pid/allresults.no_allresults pid_share
|
||||
from allresults
|
||||
join result_with_pid on result_with_pid.organization=allresults.organization),
|
||||
result_with_abstract_share as (
|
||||
select allresults.organization, result_has_abstract.no_result_with_abstract/allresults.no_allresults abstract_share
|
||||
from allresults
|
||||
join result_has_abstract on result_has_abstract.organization=allresults.organization)
|
||||
select allresults.organization, coalesce((pid_share+abstract_share)/2,pid_share) org_findable
|
||||
from allresults
|
||||
join result_with_pid_share on result_with_pid_share.organization=allresults.organization
|
||||
left outer join (
|
||||
select organization, abstract_share from result_with_abstract_share) tmp on tmp.organization=allresults.organization;
|
||||
|
||||
compute stats indi_org_findable;
|
||||
|
||||
create table indi_org_openess stored as parquet as
|
||||
WITH datasets_oa as (
|
||||
SELECT ro.organization, count(dg.id) no_oadatasets FROM indi_datasets_gold_oa dg
|
||||
join openaire_prod_stats.result_organization ro on dg.id=ro.id
|
||||
join openaire_prod_stats.dataset ds on dg.id=ds.id
|
||||
WHERE dg.is_gold=1
|
||||
group by ro.organization),
|
||||
software_oa as (
|
||||
SELECT ro.organization, count(dg.id) no_oasoftware FROM indi_software_gold_oa dg
|
||||
join openaire_prod_stats.result_organization ro on dg.id=ro.id
|
||||
join openaire_prod_stats.software ds on dg.id=ds.id
|
||||
WHERE dg.is_gold=1
|
||||
group by ro.organization),
|
||||
pubs_oa as (
|
||||
SELECT ro.organization, count(dg.id) no_oapubs FROM indi_pub_gold_oa dg
|
||||
join openaire_prod_stats.result_organization ro on dg.id=ro.id
|
||||
join openaire_prod_stats.publication ds on dg.id=ds.id
|
||||
where dg.is_gold=1
|
||||
group by ro.organization),
|
||||
allpubs as (
|
||||
SELECT ro.organization organization, count(ro.id) no_allpubs FROM result_organization ro
|
||||
join openaire_prod_stats.publication ps on ps.id=ro.id
|
||||
group by ro.organization),
|
||||
alldatasets as (
|
||||
SELECT ro.organization organization, count(ro.id) no_alldatasets FROM result_organization ro
|
||||
join openaire_prod_stats.dataset ps on ps.id=ro.id
|
||||
group by ro.organization),
|
||||
allsoftware as (
|
||||
SELECT ro.organization organization, count(ro.id) no_allsoftware FROM result_organization ro
|
||||
join openaire_prod_stats.software ps on ps.id=ro.id
|
||||
group by ro.organization),
|
||||
allpubsshare as (
|
||||
select pubs_oa.organization, pubs_oa.no_oapubs/allpubs.no_allpubs p from allpubs
|
||||
join pubs_oa on allpubs.organization=pubs_oa.organization),
|
||||
alldatasetssshare as (
|
||||
select datasets_oa.organization, datasets_oa.no_oadatasets/alldatasets.no_alldatasets c
|
||||
from alldatasets
|
||||
join datasets_oa on alldatasets.organization=datasets_oa.organization),
|
||||
allsoftwaresshare as (
|
||||
select software_oa.organization, software_oa.no_oasoftware/allsoftware.no_allsoftware s
|
||||
from allsoftware
|
||||
join software_oa on allsoftware.organization=software_oa.organization)
|
||||
select allpubsshare.organization, coalesce((c+p+s)/3, p) org_openess
|
||||
FROM allpubsshare
|
||||
left outer join (
|
||||
select organization,c from
|
||||
alldatasetssshare) tmp on tmp.organization=allpubsshare.organization
|
||||
left outer join (
|
||||
select organization,s from allsoftwaresshare) tmp1 on tmp1.organization=allpubsshare.organization;
|
||||
|
||||
compute stats indi_org_openess;
|
||||
--create table indi_software_gold_oa stored as parquet as
|
||||
--WITH gold_oa AS (
|
||||
-- SELECT issn_l, journal_is_in_doaj, journal_is_oa, issn_1 as issn
|
||||
-- FROM stats_ext.oa_journals
|
||||
-- WHERE issn_1 != ""
|
||||
-- UNION
|
||||
-- ALL SELECT issn_l,journal_is_in_doaj,journal_is_oa,issn_2 as issn
|
||||
-- FROM stats_ext.oa_journals
|
||||
-- WHERE issn_2 != "" ),
|
||||
--issn AS (
|
||||
-- SELECT *
|
||||
-- FROM (
|
||||
-- SELECT id,issn_printed as issn
|
||||
-- FROM datasource
|
||||
-- WHERE issn_printed IS NOT NULL
|
||||
-- UNION
|
||||
-- SELECT id, issn_online as issn
|
||||
-- FROM datasource
|
||||
-- WHERE issn_online IS NOT NULL ) as issn
|
||||
-- WHERE LENGTH(issn) > 7)
|
||||
--SELECT DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
|
||||
--FROM software_datasources pd
|
||||
--LEFT OUTER JOIN (
|
||||
-- SELECT pd.id, 1 as is_gold FROM software_datasources pd
|
||||
-- JOIN issn on issn.id=pd.datasource
|
||||
-- JOIN gold_oa on issn.issn = gold_oa.issn) tmp ON pd.id=tmp.id;
|
||||
--
|
||||
--compute stats indi_software_gold_oa;
|
||||
|
||||
--create table indi_org_findable stored as parquet as
|
||||
--with result_with_pid as (
|
||||
-- select ro.organization organization, count(distinct rp.id) no_result_with_pid from result_organization ro
|
||||
-- join result_pids rp on rp.id=ro.id
|
||||
-- group by ro.organization),
|
||||
--result_has_abstract as (
|
||||
-- select ro.organization organization, count(distinct rp.id) no_result_with_abstract from result_organization ro
|
||||
-- join result rp on rp.id=ro.id where rp.abstract=true
|
||||
-- group by ro.organization),
|
||||
--allresults as (
|
||||
-- select organization, count(distinct id) no_allresults from result_organization
|
||||
-- group by organization),
|
||||
--result_with_pid_share as (
|
||||
-- select allresults.organization, result_with_pid.no_result_with_pid/allresults.no_allresults pid_share
|
||||
-- from allresults
|
||||
-- join result_with_pid on result_with_pid.organization=allresults.organization),
|
||||
--result_with_abstract_share as (
|
||||
-- select allresults.organization, result_has_abstract.no_result_with_abstract/allresults.no_allresults abstract_share
|
||||
-- from allresults
|
||||
-- join result_has_abstract on result_has_abstract.organization=allresults.organization)
|
||||
--select allresults.organization, coalesce((pid_share+abstract_share)/2,pid_share) org_findable
|
||||
--from allresults
|
||||
--join result_with_pid_share on result_with_pid_share.organization=allresults.organization
|
||||
--left outer join (
|
||||
-- select organization, abstract_share from result_with_abstract_share) tmp on tmp.organization=allresults.organization;
|
||||
--
|
||||
--compute stats indi_org_findable;
|
||||
--
|
||||
--create table indi_org_openess stored as parquet as
|
||||
--WITH datasets_oa as (
|
||||
-- SELECT ro.organization, count(dg.id) no_oadatasets FROM indi_datasets_gold_oa dg
|
||||
-- join result_organization ro on dg.id=ro.id
|
||||
-- join dataset ds on dg.id=ds.id
|
||||
-- WHERE dg.is_gold=1
|
||||
-- group by ro.organization),
|
||||
--software_oa as (
|
||||
-- SELECT ro.organization, count(dg.id) no_oasoftware FROM indi_software_gold_oa dg
|
||||
-- join result_organization ro on dg.id=ro.id
|
||||
-- join software ds on dg.id=ds.id
|
||||
-- WHERE dg.is_gold=1
|
||||
-- group by ro.organization),
|
||||
--pubs_oa as (
|
||||
-- SELECT ro.organization, count(dg.id) no_oapubs FROM indi_pub_gold_oa dg
|
||||
-- join result_organization ro on dg.id=ro.id
|
||||
-- join publication ds on dg.id=ds.id
|
||||
-- where dg.is_gold=1
|
||||
-- group by ro.organization),
|
||||
--allpubs as (
|
||||
-- SELECT ro.organization organization, count(ro.id) no_allpubs FROM result_organization ro
|
||||
-- join publication ps on ps.id=ro.id
|
||||
-- group by ro.organization),
|
||||
--alldatasets as (
|
||||
-- SELECT ro.organization organization, count(ro.id) no_alldatasets FROM result_organization ro
|
||||
-- join dataset ps on ps.id=ro.id
|
||||
-- group by ro.organization),
|
||||
--allsoftware as (
|
||||
-- SELECT ro.organization organization, count(ro.id) no_allsoftware FROM result_organization ro
|
||||
-- join software ps on ps.id=ro.id
|
||||
-- group by ro.organization),
|
||||
--allpubsshare as (
|
||||
-- select pubs_oa.organization, pubs_oa.no_oapubs/allpubs.no_allpubs p from allpubs
|
||||
-- join pubs_oa on allpubs.organization=pubs_oa.organization),
|
||||
--alldatasetssshare as (
|
||||
-- select datasets_oa.organization, datasets_oa.no_oadatasets/alldatasets.no_alldatasets c
|
||||
-- from alldatasets
|
||||
-- join datasets_oa on alldatasets.organization=datasets_oa.organization),
|
||||
--allsoftwaresshare as (
|
||||
-- select software_oa.organization, software_oa.no_oasoftware/allsoftware.no_allsoftware s
|
||||
-- from allsoftware
|
||||
-- join software_oa on allsoftware.organization=software_oa.organization)
|
||||
--select allpubsshare.organization, coalesce((c+p+s)/3, p) org_openess
|
||||
--FROM allpubsshare
|
||||
--left outer join (
|
||||
-- select organization,c from
|
||||
-- alldatasetssshare) tmp on tmp.organization=allpubsshare.organization
|
||||
--left outer join (
|
||||
-- select organization,s from allsoftwaresshare) tmp1 on tmp1.organization=allpubsshare.organization;
|
||||
--
|
||||
--compute stats indi_org_openess;
|
||||
--
|
||||
create table indi_pub_hybrid_oa_with_cc stored as parquet as
|
||||
WITH hybrid_oa AS (
|
||||
SELECT issn_l, journal_is_in_doaj, journal_is_oa, issn_print as issn
|
||||
|
|
@ -418,3 +452,394 @@ GROUP BY result_id, repository_id, `year`
|
|||
order by `year` asc, result_id;
|
||||
|
||||
compute stats indi_pub_downloads_datasource_year;
|
||||
|
||||
---- Sprint 7 ----
|
||||
create table indi_pub_gold_oa stored as parquet as
|
||||
WITH gold_oa AS ( SELECT
|
||||
issn_l,
|
||||
journal_is_in_doaj,
|
||||
journal_is_oa,
|
||||
issn_1 as issn
|
||||
FROM
|
||||
stats_ext.oa_journals
|
||||
WHERE
|
||||
issn_1 != ""
|
||||
UNION
|
||||
ALL SELECT
|
||||
issn_l,
|
||||
journal_is_in_doaj,
|
||||
journal_is_oa,
|
||||
issn_2 as issn
|
||||
FROM
|
||||
stats_ext.oa_journals
|
||||
WHERE
|
||||
issn_2 != "" ), issn AS ( SELECT
|
||||
*
|
||||
FROM
|
||||
( SELECT
|
||||
id,
|
||||
issn_printed as issn
|
||||
FROM
|
||||
datasource
|
||||
WHERE
|
||||
issn_printed IS NOT NULL
|
||||
UNION
|
||||
SELECT
|
||||
id,
|
||||
issn_online as issn
|
||||
FROM
|
||||
datasource
|
||||
WHERE
|
||||
issn_online IS NOT NULL or id like '%doajarticles%') as issn
|
||||
WHERE
|
||||
LENGTH(issn) > 7)
|
||||
SELECT
|
||||
DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
|
||||
FROM
|
||||
publication_datasources pd
|
||||
left outer join(
|
||||
select pd.id, 1 as is_gold FROM publication_datasources pd
|
||||
JOIN issn on issn.id=pd.datasource
|
||||
JOIN gold_oa on issn.issn = gold_oa.issn) tmp
|
||||
on pd.id=tmp.id;
|
||||
|
||||
compute stats indi_pub_gold_oa;
|
||||
|
||||
create table indi_pub_hybrid stored as parquet as
|
||||
WITH gold_oa AS ( SELECT
|
||||
issn_l,
|
||||
journal_is_in_doaj,
|
||||
journal_is_oa,
|
||||
issn_1 as issn,
|
||||
has_apc
|
||||
FROM
|
||||
stats_ext.oa_journals
|
||||
WHERE
|
||||
issn_1 != ""
|
||||
UNION
|
||||
ALL SELECT
|
||||
issn_l,
|
||||
journal_is_in_doaj,
|
||||
journal_is_oa,
|
||||
issn_2 as issn,
|
||||
has_apc
|
||||
FROM
|
||||
stats_ext.oa_journals
|
||||
WHERE
|
||||
issn_2 != "" ), issn AS ( SELECT
|
||||
*
|
||||
FROM
|
||||
( SELECT
|
||||
id,
|
||||
issn_printed as issn
|
||||
FROM
|
||||
datasource
|
||||
WHERE
|
||||
issn_printed IS NOT NULL
|
||||
UNION
|
||||
SELECT
|
||||
id,
|
||||
issn_online as issn
|
||||
FROM
|
||||
datasource
|
||||
WHERE
|
||||
issn_online IS NOT NULL or id like '%doajarticles%') as issn
|
||||
WHERE
|
||||
LENGTH(issn) > 7)
|
||||
select distinct pd.id, coalesce(is_hybrid, 0) as is_hybrid
|
||||
from publication_datasources pd
|
||||
left outer join (
|
||||
select pd.id, 1 as is_hybrid from publication_datasources pd
|
||||
join datasource d on d.id=pd.datasource
|
||||
join issn on issn.id=pd.datasource
|
||||
join gold_oa on issn.issn=gold_oa.issn
|
||||
where (gold_oa.journal_is_in_doaj=false or gold_oa.journal_is_oa=false))tmp
|
||||
on pd.id=tmp.id;
|
||||
|
||||
compute stats indi_pub_hybrid;
|
||||
|
||||
create table indi_org_fairness stored as parquet as
|
||||
--return results with PIDs, and rich metadata group by organization
|
||||
with result_fair as
|
||||
(select ro.organization organization, count(distinct ro.id) no_result_fair from result_organization ro
|
||||
join result r on r.id=ro.id
|
||||
--join result_pids rp on r.id=rp.id
|
||||
where (title is not null) and (publisher is not null) and (abstract is true) and (year is not null) and (authors>0) and year>2003
|
||||
group by ro.organization),
|
||||
--return all results group by organization
|
||||
allresults as (select organization, count(distinct ro.id) no_allresults from result_organization ro
|
||||
join result r on r.id=ro.id
|
||||
where year>2003
|
||||
group by organization)
|
||||
--return results_fair/all_results
|
||||
select allresults.organization, result_fair.no_result_fair/allresults.no_allresults org_fairness
|
||||
from allresults
|
||||
join result_fair on result_fair.organization=allresults.organization;
|
||||
|
||||
compute stats indi_org_fairness;
|
||||
|
||||
create table indi_org_fairness_pub_pr stored as parquet as
|
||||
with result_fair as
|
||||
(select ro.organization organization, count(distinct ro.id) no_result_fair
|
||||
from result_organization ro
|
||||
join publication p on p.id=ro.id
|
||||
join indi_pub_doi_from_crossref dc on dc.id=p.id
|
||||
join indi_pub_grey_lit gl on gl.id=p.id
|
||||
where (title is not null) and (publisher is not null) and (abstract is true) and (year is not null)
|
||||
and (authors>0) and cast(year as int)>2003 and dc.doi_from_crossref=1 and gl.grey_lit=0
|
||||
group by ro.organization),
|
||||
allresults as (select organization, count(distinct ro.id) no_allresults from result_organization ro
|
||||
join publication p on p.id=ro.id
|
||||
where cast(year as int)>2003
|
||||
group by organization)
|
||||
--return results_fair/all_results
|
||||
select allresults.organization, result_fair.no_result_fair/allresults.no_allresults org_fairness
|
||||
from allresults
|
||||
join result_fair on result_fair.organization=allresults.organization;
|
||||
|
||||
compute stats indi_org_fairness_pub_pr;
|
||||
|
||||
create table indi_org_fairness_pub_year stored as parquet as
|
||||
with result_fair as
|
||||
(select year, ro.organization organization, count(distinct ro.id) no_result_fair from result_organization ro
|
||||
join publication p on p.id=ro.id
|
||||
where (title is not null) and (publisher is not null) and (abstract is true) and (year is not null) and (authors>0) and cast(year as int)>2003
|
||||
group by ro.organization, year),
|
||||
allresults as (select year, organization, count(distinct ro.id) no_allresults from result_organization ro
|
||||
join publication p on p.id=ro.id
|
||||
where cast(year as int)>2003
|
||||
group by organization, year)
|
||||
select allresults.year, allresults.organization, result_fair.no_result_fair/allresults.no_allresults org_fairness
|
||||
from allresults
|
||||
join result_fair on result_fair.organization=allresults.organization and result_fair.year=allresults.year;
|
||||
|
||||
compute stats indi_org_fairness_pub_year;
|
||||
|
||||
create table indi_org_fairness_pub as
|
||||
with result_fair as
|
||||
(select ro.organization organization, count(distinct ro.id) no_result_fair
|
||||
from result_organization ro
|
||||
join publication p on p.id=ro.id
|
||||
where (title is not null) and (publisher is not null) and (abstract is true) and (year is not null)
|
||||
and (authors>0) and cast(year as int)>2003
|
||||
group by ro.organization),
|
||||
allresults as (select organization, count(distinct ro.id) no_allresults from result_organization ro
|
||||
join publication p on p.id=ro.id
|
||||
where cast(year as int)>2003
|
||||
group by organization)
|
||||
select allresults.organization, result_fair.no_result_fair/allresults.no_allresults org_fairness
|
||||
from allresults
|
||||
join result_fair on result_fair.organization=allresults.organization;
|
||||
|
||||
compute stats indi_org_fairness_pub;
|
||||
|
||||
create table indi_org_fairness_year stored as parquet as
|
||||
with result_fair as
|
||||
(select year, ro.organization organization, count(distinct ro.id) no_result_fair from result_organization ro
|
||||
join result r on r.id=ro.id
|
||||
join result_pids rp on r.id=rp.id
|
||||
where (title is not null) and (publisher is not null) and (abstract is true) and (year is not null) and (authors>0) and year>2003
|
||||
group by ro.organization, year),
|
||||
allresults as (select year, organization, count(distinct ro.id) no_allresults from result_organization ro
|
||||
join result r on r.id=ro.id
|
||||
where year>2003
|
||||
group by organization, year)
|
||||
--return results_fair/all_results
|
||||
select allresults.year, allresults.organization, result_fair.no_result_fair/allresults.no_allresults org_fairness
|
||||
from allresults
|
||||
join result_fair on result_fair.organization=allresults.organization and result_fair.year=allresults.year;
|
||||
|
||||
compute stats indi_org_fairness_year;
|
||||
|
||||
create table indi_org_findable_year stored as parquet as
|
||||
--return results with PIDs group by organization,year
|
||||
with result_with_pid as
|
||||
(select year, ro.organization organization, count(distinct rp.id) no_result_with_pid from result_organization ro
|
||||
join result_pids rp on rp.id=ro.id
|
||||
join result r on r.id=rp.id
|
||||
where year >2003
|
||||
group by ro.organization, year),
|
||||
--return all results group by organization,year
|
||||
allresults as (select year, organization, count(distinct ro.id) no_allresults from result_organization ro
|
||||
join result r on r.id=ro.id
|
||||
where year >2003
|
||||
group by organization, year)
|
||||
--return results_with_pid/all_results
|
||||
select allresults.year, allresults.organization, result_with_pid.no_result_with_pid/allresults.no_allresults org_findable
|
||||
from allresults
|
||||
join result_with_pid on result_with_pid.organization=allresults.organization and result_with_pid.year=allresults.year;
|
||||
|
||||
compute stats indi_org_findable_year;
|
||||
|
||||
create table indi_org_findable stored as parquet as
|
||||
--return results with PIDs group by organization
|
||||
with result_with_pid as
|
||||
(select ro.organization organization, count(distinct rp.id) no_result_with_pid from result_organization ro
|
||||
join result_pids rp on rp.id=ro.id
|
||||
join result r on r.id=rp.id
|
||||
where year >2003
|
||||
group by ro.organization),
|
||||
--return all results group by organization
|
||||
allresults as (select organization, count(distinct ro.id) no_allresults from result_organization ro
|
||||
join result r on r.id=ro.id
|
||||
where year >2003
|
||||
group by organization)
|
||||
--return results_with_pid/all_results
|
||||
select allresults.organization, result_with_pid.no_result_with_pid/allresults.no_allresults org_findable
|
||||
from allresults
|
||||
join result_with_pid on result_with_pid.organization=allresults.organization;
|
||||
|
||||
compute stats indi_org_findable;
|
||||
|
||||
create table indi_org_openess stored as parquet as
|
||||
WITH pubs_oa as (
|
||||
SELECT ro.organization, count(distinct r.id) no_oapubs FROM publication r
|
||||
join result_organization ro on ro.id=r.id
|
||||
join result_instance ri on ri.id=r.id
|
||||
where (ri.accessright = 'Open Access' or ri.accessright = 'Embargo' or ri.accessright = 'Open Source')
|
||||
and cast(r.year as int)>2003
|
||||
group by ro.organization),
|
||||
datasets_oa as (
|
||||
SELECT ro.organization, count(distinct r.id) no_oadatasets FROM dataset r
|
||||
join result_organization ro on ro.id=r.id
|
||||
join result_instance ri on ri.id=r.id
|
||||
where (ri.accessright = 'Open Access' or ri.accessright = 'Embargo' or ri.accessright = 'Open Source')
|
||||
and cast(r.year as int)>2003
|
||||
group by ro.organization),
|
||||
software_oa as (
|
||||
SELECT ro.organization, count(distinct r.id) no_oasoftware FROM software r
|
||||
join result_organization ro on ro.id=r.id
|
||||
join result_instance ri on ri.id=r.id
|
||||
where (ri.accessright = 'Open Access' or ri.accessright = 'Embargo' or ri.accessright = 'Open Source')
|
||||
and cast(r.year as int)>2003
|
||||
group by ro.organization),
|
||||
allpubs as (
|
||||
SELECT ro.organization organization, count(ro.id) no_allpubs FROM result_organization ro
|
||||
join publication ps on ps.id=ro.id
|
||||
where cast(ps.year as int)>2003
|
||||
group by ro.organization),
|
||||
alldatasets as (
|
||||
SELECT ro.organization organization, count(ro.id) no_alldatasets FROM result_organization ro
|
||||
join dataset ps on ps.id=ro.id
|
||||
where cast(ps.year as int)>2003
|
||||
group by ro.organization),
|
||||
allsoftware as (
|
||||
SELECT ro.organization organization, count(ro.id) no_allsoftware FROM result_organization ro
|
||||
join software ps on ps.id=ro.id
|
||||
where cast(ps.year as int)>2003
|
||||
group by ro.organization),
|
||||
allpubsshare as (
|
||||
select pubs_oa.organization, pubs_oa.no_oapubs/allpubs.no_allpubs p from allpubs
|
||||
join pubs_oa on allpubs.organization=pubs_oa.organization),
|
||||
alldatasetssshare as (
|
||||
select datasets_oa.organization, datasets_oa.no_oadatasets/alldatasets.no_alldatasets d
|
||||
from alldatasets
|
||||
join datasets_oa on alldatasets.organization=datasets_oa.organization),
|
||||
allsoftwaresshare as (
|
||||
select software_oa.organization, software_oa.no_oasoftware/allsoftware.no_allsoftware s
|
||||
from allsoftware
|
||||
join software_oa on allsoftware.organization=software_oa.organization)
|
||||
select allpubsshare.organization,
|
||||
(p+isnull(s,0)+isnull(d,0))/(1+(case when s is null then 0 else 1 end)
|
||||
+(case when d is null then 0 else 1 end))
|
||||
org_openess FROM allpubsshare
|
||||
left outer join (select organization,d from
|
||||
alldatasetssshare) tmp1
|
||||
on tmp1.organization=allpubsshare.organization
|
||||
left outer join (select organization,s from
|
||||
allsoftwaresshare) tmp2
|
||||
on tmp2.organization=allpubsshare.organization;
|
||||
|
||||
compute stats indi_org_openess;
|
||||
|
||||
create table indi_org_openess_year stored as parquet as
|
||||
WITH pubs_oa as (
|
||||
SELECT r.year, ro.organization, count(distinct r.id) no_oapubs FROM publication r
|
||||
join result_organization ro on ro.id=r.id
|
||||
join result_instance ri on ri.id=r.id
|
||||
where (ri.accessright = 'Open Access' or ri.accessright = 'Embargo' or ri.accessright = 'Open Source')
|
||||
and cast(r.year as int)>2003
|
||||
group by ro.organization,r.year),
|
||||
datasets_oa as (
|
||||
SELECT r.year,ro.organization, count(distinct r.id) no_oadatasets FROM dataset r
|
||||
join result_organization ro on ro.id=r.id
|
||||
join result_instance ri on ri.id=r.id
|
||||
where (ri.accessright = 'Open Access' or ri.accessright = 'Embargo' or ri.accessright = 'Open Source')
|
||||
and cast(r.year as int)>2003
|
||||
group by ro.organization, r.year),
|
||||
software_oa as (
|
||||
SELECT r.year,ro.organization, count(distinct r.id) no_oasoftware FROM software r
|
||||
join result_organization ro on ro.id=r.id
|
||||
join result_instance ri on ri.id=r.id
|
||||
where (ri.accessright = 'Open Access' or ri.accessright = 'Embargo' or ri.accessright = 'Open Source')
|
||||
and cast(r.year as int)>2003
|
||||
group by ro.organization, r.year),
|
||||
allpubs as (
|
||||
SELECT p.year,ro.organization organization, count(ro.id) no_allpubs FROM result_organization ro
|
||||
join publication p on p.id=ro.id where cast(p.year as int)>2003
|
||||
group by ro.organization, p.year),
|
||||
alldatasets as (
|
||||
SELECT d.year, ro.organization organization, count(ro.id) no_alldatasets FROM result_organization ro
|
||||
join dataset d on d.id=ro.id where cast(d.year as int)>2003
|
||||
group by ro.organization, d.year),
|
||||
allsoftware as (
|
||||
SELECT s.year,ro.organization organization, count(ro.id) no_allsoftware FROM result_organization ro
|
||||
join software s on s.id=ro.id where cast(s.year as int)>2003
|
||||
group by ro.organization, s.year),
|
||||
allpubsshare as (
|
||||
select allpubs.year, pubs_oa.organization, pubs_oa.no_oapubs/allpubs.no_allpubs p from allpubs
|
||||
join pubs_oa on allpubs.organization=pubs_oa.organization where cast(allpubs.year as INT)=cast(pubs_oa.year as int)),
|
||||
alldatasetssshare as (
|
||||
select alldatasets.year, datasets_oa.organization, datasets_oa.no_oadatasets/alldatasets.no_alldatasets d
|
||||
from alldatasets
|
||||
join datasets_oa on alldatasets.organization=datasets_oa.organization where cast(alldatasets.year as INT)=cast(datasets_oa.year as int)),
|
||||
allsoftwaresshare as (
|
||||
select allsoftware.year, software_oa.organization, software_oa.no_oasoftware/allsoftware.no_allsoftware s
|
||||
from allsoftware
|
||||
join software_oa on allsoftware.organization=software_oa.organization where cast(allsoftware.year as INT)=cast(software_oa.year as int))
|
||||
select allpubsshare.year, allpubsshare.organization,
|
||||
(p+isnull(s,0)+isnull(d,0))/(1+(case when s is null then 0 else 1 end)
|
||||
+(case when d is null then 0 else 1 end))
|
||||
org_openess FROM allpubsshare
|
||||
left outer join (select year, organization,d from
|
||||
alldatasetssshare) tmp1
|
||||
on tmp1.organization=allpubsshare.organization and tmp1.year=allpubsshare.year
|
||||
left outer join (select year, organization,s from
|
||||
allsoftwaresshare) tmp2
|
||||
on tmp2.organization=allpubsshare.organization and tmp2.year=allpubsshare.year;
|
||||
|
||||
compute stats indi_org_openess_year;
|
||||
|
||||
create table indi_pub_has_preprint stored as parquet as
|
||||
select distinct p.id, coalesce(has_preprint, 0) as has_preprint
|
||||
from publication_classifications p
|
||||
left outer join (
|
||||
select p.id, 1 as has_preprint
|
||||
from publication_classifications p
|
||||
where p.type='Preprint') tmp
|
||||
on p.id= tmp.id;
|
||||
|
||||
compute stats indi_pub_has_preprint;
|
||||
|
||||
create table indi_pub_in_subscribed stored as parquet as
|
||||
select distinct p.id, coalesce(is_subscription, 0) as is_subscription
|
||||
from publication p
|
||||
left outer join(
|
||||
select p.id, 1 as is_subscription from publication p
|
||||
join indi_pub_gold_oa g on p.id=g.id
|
||||
join indi_pub_hybrid h on p.id=h.id
|
||||
join indi_pub_in_transformative t on p.id=t.id
|
||||
where g.is_gold=0 and h.is_hybrid=0 and t.is_transformative=0) tmp
|
||||
on p.id=tmp.id;
|
||||
|
||||
compute stats indi_pub_in_subscribed;
|
||||
|
||||
create table indi_result_with_pid as
|
||||
select distinct p.id, coalesce(result_with_pid, 0) as result_with_pid
|
||||
from result p
|
||||
left outer join (
|
||||
select p.id, 1 as result_with_pid
|
||||
from result_pids p) tmp
|
||||
on p.id= tmp.id;
|
||||
|
||||
compute stats indi_result_with_pid;
|
||||
|
|
@ -38,7 +38,14 @@ create table TARGET.result stored as parquet as
|
|||
'openorgs____::ec3665affa01aeafa28b7852c4176dbd', --Rudjer Boskovic Institute
|
||||
'openorgs____::5f31346d444a7f06a28c880fb170b0f6', --Ghent University
|
||||
'openorgs____::2dbe47117fd5409f9c61620813456632', --University of Luxembourg
|
||||
'openorgs____::6445d7758d3a40c4d997953b6632a368' --National Institute of Informatics (NII)
|
||||
'openorgs____::6445d7758d3a40c4d997953b6632a368', --National Institute of Informatics (NII)
|
||||
|
||||
'openorgs____::b77c01aa15de3675da34277d48de2ec1', -- Valencia Catholic University Saint Vincent Martyr
|
||||
'openorgs____::7fe2f66cdc43983c6b24816bfe9cf6a0', -- Unviersity of Warsaw
|
||||
'openorgs____::15e7921fc50d9aa1229a82a84429419e', -- University Of Thessaly
|
||||
'openorgs____::11f7919dadc8f8a7251af54bba60c956', -- Technical University of Crete
|
||||
'openorgs____::84f0c5f5dbb6daf42748485924efde4b', -- University of Piraeus
|
||||
'openorgs____::4ac562f0376fce3539504567649cb373' -- University of Patras
|
||||
) )) foo;
|
||||
compute stats TARGET.result;
|
||||
|
||||
|
|
@ -107,6 +114,9 @@ compute stats TARGET.result_sources;
|
|||
create table TARGET.result_topics stored as parquet as select * from SOURCE.result_topics orig where exists (select 1 from TARGET.result r where r.id=orig.id);
|
||||
compute stats TARGET.result_topics;
|
||||
|
||||
create table TARGET.result_fos stored as parquet as select * from SOURCE.result_fos orig where exists (select 1 from TARGET.result r where r.id=orig.id);
|
||||
compute stats TARGET.result_fos;
|
||||
|
||||
create view TARGET.foo1 as select * from SOURCE.result_result rr where rr.source in (select id from TARGET.result);
|
||||
create view TARGET.foo2 as select * from SOURCE.result_result rr where rr.target in (select id from TARGET.result);
|
||||
create table TARGET.result_result STORED AS PARQUET as select distinct * from (select * from TARGET.foo1 union all select * from TARGET.foo2) foufou;
|
||||
|
|
|
|||
|
|
@ -11,13 +11,13 @@ where p.datainfo.deletedbyinference=false and p.datainfo.invisible=false;
|
|||
CREATE TABLE ${stats_db_name}.project_organizations STORED AS PARQUET AS
|
||||
SELECT substr(r.source, 4) AS id, substr(r.target, 4) AS organization
|
||||
from ${openaire_db_name}.relation r
|
||||
WHERE r.reltype = 'projectOrganization'
|
||||
WHERE r.reltype = 'projectOrganization' and r.source like '40|%'
|
||||
and r.datainfo.deletedbyinference = false and r.datainfo.invisible=false;
|
||||
|
||||
CREATE TABLE ${stats_db_name}.project_results STORED AS PARQUET AS
|
||||
SELECT substr(r.target, 4) AS id, substr(r.source, 4) AS result, r.datainfo.provenanceaction.classname as provenance
|
||||
FROM ${openaire_db_name}.relation r
|
||||
WHERE r.reltype = 'resultProject'
|
||||
WHERE r.reltype = 'resultProject' and r.target like '40|%'
|
||||
and r.datainfo.deletedbyinference = false and r.datainfo.invisible=false;
|
||||
|
||||
create table ${stats_db_name}.project_classification STORED AS PARQUET as
|
||||
|
|
|
|||
|
|
@ -123,6 +123,16 @@ UNION ALL
|
|||
SELECT *
|
||||
FROM ${stats_db_name}.otherresearchproduct_topics;
|
||||
|
||||
create table ${stats_db_name}.result_fos stored as parquet as
|
||||
with
|
||||
lvl1 as (select id, topic from ${stats_db_name}.result_topics where topic like '__ %' and type='Fields of Science and Technology classification'),
|
||||
lvl2 as (select id, topic from ${stats_db_name}.result_topics where topic like '____ %' and type='Fields of Science and Technology classification'),
|
||||
lvl3 as (select id, topic from ${stats_db_name}.result_topics where topic like '______ %' and type='Fields of Science and Technology classification')
|
||||
select lvl1.id, lvl1.topic as lvl1, lvl2.topic as lvl2, lvl3.topic as lvl3
|
||||
from lvl1
|
||||
join lvl2 on lvl1.id=lvl2.id and substr(lvl2.topic, 1, 2)=substr(lvl1.topic, 1, 2)
|
||||
join lvl3 on lvl3.id=lvl1.id and substr(lvl3.topic, 1, 4)=substr(lvl2.topic, 1, 4);
|
||||
|
||||
CREATE TABLE ${stats_db_name}.result_organization STORED AS PARQUET AS
|
||||
SELECT substr(r.target, 4) AS id, substr(r.source, 4) AS organization
|
||||
FROM ${openaire_db_name}.relation r
|
||||
|
|
@ -135,3 +145,4 @@ select pr.result AS id, pr.id AS project, datediff(p.enddate, p.startdate) AS da
|
|||
FROM ${stats_db_name}.result r
|
||||
JOIN ${stats_db_name}.project_results pr ON r.id = pr.result
|
||||
JOIN ${stats_db_name}.project_tmp p ON p.id = pr.id;
|
||||
|
||||
|
|
|
|||
Loading…
Reference in New Issue