fixed wrong path

3 years ago · 0799ac9fb6
parent 4d53402712
commit 0799ac9fb6
1 changed files with 1 additions and 1 deletions
--- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/sx/graph/ebi/SparkEBILinksToOaf.scala
+++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/sx/graph/ebi/SparkEBILinksToOaf.scala
@ -36,7 +36,7 @@ object SparkEBILinksToOaf {

    ebi_rdd.write.mode(SaveMode.Overwrite).save(s"${sourcePath}_dataset")

-    val ebLinks:Dataset[EBILinkItem] = spark.read.load(sourcePath).as[EBILinkItem].filter(l => l.links!= null)
+    val ebLinks:Dataset[EBILinkItem] = spark.read.load(s"${sourcePath}_dataset").as[EBILinkItem].filter(l => l.links!= null)

    ebLinks.flatMap(j =>BioDBToOAF.parse_ebi_links(j.links))
      .repartition(4000)