85 lines
3.2 KiB
Java
85 lines
3.2 KiB
Java
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package eu.dnetlib.dhp.oa.graph.dump.graph;
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import eu.dnetlib.dhp.application.ArgumentApplicationParser;
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import eu.dnetlib.dhp.oa.graph.dump.DumpProducts;
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import eu.dnetlib.dhp.oa.graph.dump.QueryInformationSystem;
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import eu.dnetlib.dhp.oa.graph.dump.Utils;
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import eu.dnetlib.dhp.oa.graph.dump.community.CommunityMap;
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import eu.dnetlib.dhp.oa.graph.dump.community.SparkDumpCommunityProducts;
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import eu.dnetlib.dhp.schema.common.ModelSupport;
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import eu.dnetlib.dhp.schema.dump.oaf.ControlledField;
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import eu.dnetlib.dhp.schema.dump.oaf.Country;
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import eu.dnetlib.dhp.schema.dump.oaf.graph.*;
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import eu.dnetlib.dhp.schema.oaf.Field;
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import eu.dnetlib.dhp.schema.oaf.OafEntity;
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import org.apache.avro.generic.GenericData;
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import org.apache.commons.io.IOUtils;
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import org.apache.spark.SparkConf;
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import org.apache.spark.sql.Encoders;
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import org.apache.spark.sql.SaveMode;
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import org.apache.spark.sql.SparkSession;
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import org.dom4j.Document;
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import org.dom4j.DocumentException;
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import org.dom4j.Node;
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import org.dom4j.io.SAXReader;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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import javax.swing.text.html.Option;
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import javax.xml.bind.annotation.adapters.CollapsedStringAdapter;
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import java.io.Serializable;
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import java.io.StringReader;
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import java.util.ArrayList;
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import java.util.List;
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import java.util.Optional;
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import java.util.stream.Collectors;
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import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkSession;
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public class SparkDumpJob implements Serializable {
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private static final Logger log = LoggerFactory.getLogger(SparkDumpCommunityProducts.class);
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public static void main(String[] args) throws Exception {
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String jsonConfiguration = IOUtils
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.toString(
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SparkDumpJob.class
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.getResourceAsStream(
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"/eu/dnetlib/dhp/oa/graph/dump/input_parameters.json"));
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
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parser.parseArgument(args);
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Boolean isSparkSessionManaged = Optional
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.ofNullable(parser.get("isSparkSessionManaged"))
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.map(Boolean::valueOf)
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.orElse(Boolean.TRUE);
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log.info("isSparkSessionManaged: {}", isSparkSessionManaged);
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final String inputPath = parser.get("sourcePath");
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log.info("inputPath: {}", inputPath);
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final String outputPath = parser.get("outputPath");
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log.info("outputPath: {}", outputPath);
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final String resultClassName = parser.get("resultTableName");
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log.info("resultTableName: {}", resultClassName);
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final String isLookUpUrl = parser.get("isLookUpUrl");
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log.info("isLookUpUrl: {}", isLookUpUrl);
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Class<? extends OafEntity> inputClazz = (Class<? extends OafEntity>) Class.forName(resultClassName);
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QueryInformationSystem queryInformationSystem = new QueryInformationSystem();
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queryInformationSystem.setIsLookUp(Utils.getIsLookUpService(isLookUpUrl));
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CommunityMap communityMap = queryInformationSystem.getCommunityMap();
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DumpGraph dg = new DumpGraph();
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dg.run(isSparkSessionManaged, inputPath, outputPath, inputClazz, communityMap);
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}
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}
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