71 lines
2.9 KiB
XML
71 lines
2.9 KiB
XML
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<workflow-app name="orcid_to_result_from_semrel_propagation" xmlns="uri:oozie:workflow:0.5">
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<parameters>
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<property>
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<name>sourcePath</name>
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<description>the source path</description>
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</property>
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<property>
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<name>allowedsemrels</name>
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<description>the semantic relationships allowed for propagation</description>
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</property>
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<!-- <property>-->
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<!-- <name>sparkDriverMemory</name>-->
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<!-- <description>memory for driver process</description>-->
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<!-- </property>-->
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<!-- <property>-->
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<!-- <name>sparkExecutorMemory</name>-->
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<!-- <description>memory for individual executor</description>-->
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<!-- </property>-->
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<!-- <property>-->
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<!-- <name>sparkExecutorCores</name>-->
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<!-- <description>number of cores used by single executor</description>-->
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<!-- </property>-->
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<property>
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<name>writeUpdate</name>
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<description>writes the information found for the update. No double check done if the information is already present</description>
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</property>
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<property>
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<name>saveGraph</name>
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<description>writes new version of the graph after the propagation step</description>
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</property>
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</parameters>
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<start to="OrcidToResultFromSemRelPropagation"/>
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<kill name="Kill">
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<message>Action failed, error message[${wf:errorMessage(wf:lastErrorNode())}]</message>
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</kill>
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<action name="OrcidToResultFromSemRelPropagation">
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<spark xmlns="uri:oozie:spark-action:0.2">
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<job-tracker>${jobTracker}</job-tracker>
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<name-node>${nameNode}</name-node>
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<master>yarn-cluster</master>
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<mode>cluster</mode>
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<name>OrcidToResultFromSemRelPropagation</name>
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<class>eu.dnetlib.dhp.orcidtoresultfromsemrel.SparkOrcidToResultFromSemRelJob</class>
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<jar>dhp-propagation-${projectVersion}.jar</jar>
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<spark-opts>
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--num-executors=${sparkExecutorNumber}
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--executor-memory=${sparkExecutorMemory}
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--executor-cores=${sparkExecutorCores}
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--driver-memory=${sparkDriverMemory}
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--conf spark.extraListeners=${spark2ExtraListeners}
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--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
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--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
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--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
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--conf spark.dynamicAllocation.enabled=true
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--conf spark.dynamicAllocation.maxExecutors=${spark2MaxExecutors}
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</spark-opts>
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<arg>-mt</arg> <arg>yarn-cluster</arg>
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<arg>--sourcePath</arg><arg>${sourcePath}</arg>
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<arg>--allowedsemrels</arg><arg>${allowedsemrels}</arg>
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<arg>--writeUpdate</arg><arg>${writeUpdate}</arg>
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<arg>--saveGraph</arg><arg>${saveGraph}</arg>
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</spark>
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<ok to="End"/>
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<error to="Kill"/>
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</action>
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<end name="End"/>
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</workflow-app>
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