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implementation of romansmatch and re-implementation of the getNumber function. New terms in the translation map and update of the configuration

This commit is contained in:
miconis 2019-11-28 16:54:44 +01:00
parent 493b385b5b
commit 5676e625bd
10 changed files with 120 additions and 75 deletions
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1
dnet-dedup-test/src/test/java/eu/dnetlib/pace/DedupLocalTest.java
View File

@ -56,7 +56,6 @@ public class DedupLocalTest extends DedupTestUtils {
System.out.println("total time = " + (System.currentTimeMillis()-startTime));
printStatistics(ccs);
// accumulators.forEach((name, acc) -> System.out.println(name + " -> " + acc.value()));
}

2
dnet-dedup-test/src/test/resources/eu/dnetlib/pace/config/organization.current.conf
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@ -138,7 +138,7 @@
"legalname" : []
},
"synonyms": {
"key::1": ["university","università","università studi","universitario","universitaria","université","universitaire","universitaires","universidad","universitade","Universität","universitaet","Uniwersytet","университет","universiteit","πανεπιστήμιο","universitesi","universiteti"],
"key::1": ["university","università","università studi","universitario","universitaria","université","universitaire","universitaires","universidad","universitade","Universität","universitaet","Uniwersytet","университет","universiteit","πανεπιστήμιο","universitesi","universiteti", "universiti"],
"key::2": ["studies","studi","études","estudios","estudos","Studien","studia","исследования","studies","σπουδές"],
"key::3": ["advanced","superiore","supérieur","supérieure","supérieurs","supérieures","avancado","avancados","fortgeschrittene","fortgeschritten","zaawansowany","передовой","gevorderd","gevorderde","προχωρημένος","προχωρημένη","προχωρημένο","προχωρημένες","προχωρημένα","wyzsza"],
"key::4": ["institute","istituto","institut","instituto","instituto","Institut","instytut","институт","instituut","ινστιτούτο"],

15
dnet-dedup-test/src/test/resources/eu/dnetlib/pace/config/organization.strict.conf
View File

@ -99,7 +99,14 @@
"field": "legalname",
"comparator": "numbersMatch",
"weight": 1,
"countIfUndefined": "false",
"countIfUndefined": "true",
"params": {}
},
{
"field": "legalname",
"comparator": "romansMatch",
"weight": 1,
"countIfUndefined": "true",
"params": {}
}
],
@ -136,7 +143,7 @@
"field": "legalname",
"comparator": "keywordMatch",
"weight": 1.0,
"countIfUndefined": "false",
"countIfUndefined": "true",
"params": {
"windowSize": "4",
"threshold": "0.9"
@ -148,7 +155,7 @@
"positive": "layer5",
"negative": "NO_MATCH",
"undefined": "layer5",
"ignoreUndefined": "false"
"ignoreUndefined": "true"
},
"layer5": {
"fields": [
@ -189,7 +196,7 @@
"legalname" : []
},
"synonyms": {
"key::1": ["university","università","università studi","universitario","universitaria","université","universitaire","universitaires","universidad","universitade","Universität","universitaet","Uniwersytet","университет","universiteit","πανεπιστήμιο","universitesi","universiteti"],
"key::1": ["university","università","università studi","universitario","universitaria","université","universitaire","universitaires","universidad","universitade","Universität","universitaet","Uniwersytet","университет","universiteit","πανεπιστήμιο","universitesi","universiteti", "universiti"],
"key::2": ["studies","studi","études","estudios","estudos","Studien","studia","исследования","studies","σπουδές"],
"key::3": ["advanced","superiore","supérieur","supérieure","supérieurs","supérieures","avancado","avancados","fortgeschrittene","fortgeschritten","zaawansowany","передовой","gevorderd","gevorderde","προχωρημένος","προχωρημένη","προχωρημένο","προχωρημένες","προχωρημένα","wyzsza"],
"key::4": ["institute","istituto","institut","instituto","instituto","Institut","instytut","институт","instituut","ινστιτούτο"],

74
dnet-dedup-test/src/test/resources/eu/dnetlib/pace/examples/organization.to.fix.json
View File

@ -1,46 +1,28 @@
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{"dateoftransformation":"2018-11-07","originalId":["re3data_____::47104c6c407c9b634689e9a91be92237"],"collectedfrom":[{"value":"Registry of Research Data Repository","key":"10|openaire____::21f8a223b9925c2f87c404096080b046"}],"organization":{"metadata":{"eclegalbody":{"value":"false"},"eclegalperson":{"value":"false"},"ecinternationalorganization":{"value":"false"},"ecresearchorganization":{"value":"false"},"ecnonprofit":{"value":"true"},"ecenterprise":{"value":"false"},"websiteurl":{"value":"https://www.energy.gov/"},"ecnutscode":{"value":"false"},"ecinternationalorganizationeurinterests":{"value":"false"},"legalname":{"value":"United States, Department of Energy"},"country":{"classid":"US","classname":"United States","schemename":"dnet:countries","schemeid":"dnet:countries"},"echighereducation":{"value":"false"},"ecsmevalidated":{"value":"false"}}},"dateofcollection":"2018-11-07","type":20,"id":"20|re3data_____::8afb3c677712bc1ce71c918370a5453e"}
{"dateoftransformation":"2019-10-14 08:59:35.295767","originalId":["openorgs____::0000061429"],"pid":[{"qualifier":{"classid":"grid.ac","classname":"grid.ac","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"grid.471035.4"}],"collectedfrom":[{"value":"OpenOrgs Database","key":"10|openaire____::0362fcdb3076765d9c0041ad331553e8"}],"organization":{"metadata":{"legalshortname":{"value":"Them (United States)"},"websiteurl":{"value":"http://www.them.net/"},"country":{"classid":"US","classname":"United States","schemename":"dnet:countries","schemeid":"dnet:countries"},"alternativeNames":[{"value":"Technical Help in Engineering and Marketing"},{"value":"Them (United States)"}],"legalname":{"value":"Them (United States)"}}},"dateofcollection":"","type":20,"id":"20|openorgs____::159f342637e5de68a56b291f2de5d06e"}
{"dateoftransformation":"2019-10-14 08:59:35.295767","originalId":["openorgs____::0000027984"],"pid":[{"qualifier":{"classid":"grid.ac","classname":"grid.ac","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"grid.436835.f"}],"collectedfrom":[{"value":"OpenOrgs Database","key":"10|openaire____::0362fcdb3076765d9c0041ad331553e8"}],"organization":{"metadata":{"legalshortname":{"value":"O.D. 260 (United States)"},"country":{"classid":"US","classname":"United States","schemename":"dnet:countries","schemeid":"dnet:countries"},"alternativeNames":[{"value":"O.D. 260 (United States)"}],"legalname":{"value":"O.D. 260 (United States)"}}},"dateofcollection":"","type":20,"id":"20|openorgs____::ea09ae4f37c6c27a1dc8fe1361382b60"}
{"dateoftransformation":"2019-10-14 08:59:35.295767","originalId":["openorgs____::0000023136"],"pid":[{"qualifier":{"classid":"ISNI","classname":"ISNI","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"0000 0001 1940 9410"},{"qualifier":{"classid":"FundRef","classname":"FundRef","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"100004347"},{"qualifier":{"classid":"FundRef","classname":"FundRef","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"100004734"},{"qualifier":{"classid":"Wikidata","classname":"Wikidata","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"Q2843047"},{"qualifier":{"classid":"Wikidata","classname":"Wikidata","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"Q35476"},{"qualifier":{"classid":"grid.ac","classname":"grid.ac","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"grid.431860.8"}],"collectedfrom":[{"value":"OpenOrgs Database","key":"10|openaire____::0362fcdb3076765d9c0041ad331553e8"}],"organization":{"metadata":{"legalshortname":{"value":"AT&T (United States)"},"websiteurl":{"value":"https://www.att.com/"},"country":{"classid":"US","classname":"United States","schemename":"dnet:countries","schemeid":"dnet:countries"},"alternativeNames":[{"value":"AT&T (United States)"},{"value":"American Telephone and Telegraph Company"}],"legalname":{"value":"AT&T (United States)"}}},"dateofcollection":"","type":20,"id":"20|openorgs____::f373da4c840b8530b5015a34acceab6a"}
{"dateoftransformation":"2019-10-14 08:59:35.295767","originalId":["openorgs____::0000089215"],"pid":[{"qualifier":{"classid":"grid.ac","classname":"grid.ac","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"grid.499209.f"}],"collectedfrom":[{"value":"OpenOrgs Database","key":"10|openaire____::0362fcdb3076765d9c0041ad331553e8"}],"organization":{"metadata":{"legalshortname":{"value":"Allen (United States)"},"websiteurl":{"value":"https://www.allencorporation.com"},"country":{"classid":"US","classname":"United States","schemename":"dnet:countries","schemeid":"dnet:countries"},"alternativeNames":[{"value":"Allen (United States)"}],"legalname":{"value":"Allen (United States)"}}},"dateofcollection":"","type":20,"id":"20|openorgs____::fcf6bc76399756e94ce484f7a8b379d7"}
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{"dateoftransformation":"2019-10-14 08:59:35.295767","originalId":["openorgs____::0000040686"],"pid":[{"qualifier":{"classid":"grid.ac","classname":"grid.ac","schemename":"dnet:pid_types","schemeid":"dnet:pid_types"},"value":"grid.450011.1"}],"collectedfrom":[{"value":"OpenOrgs Database","key":"10|openaire____::0362fcdb3076765d9c0041ad331553e8"}],"organization":{"metadata":{"legalshortname":{"value":"24M (United States)"},"websiteurl":{"value":"http://www.24-m.com/"},"country":{"classid":"US","classname":"United States","schemename":"dnet:countries","schemeid":"dnet:countries"},"alternativeNames":[{"value":"24M (United States)"}],"legalname":{"value":"24M (United States)"}}},"dateofcollection":"","type":20,"id":"20|openorgs____::24837fcb72cc5873a0761c1b07e82cbd"}
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16
dnet-pace-core/src/main/java/eu/dnetlib/pace/common/AbstractPaceFunctions.java
View File

@ -17,6 +17,7 @@ import java.io.IOException;
import java.io.StringWriter;
import java.text.Normalizer;
import java.util.*;
import java.util.regex.Pattern;
import java.util.stream.Collectors;
/**
@ -48,6 +49,8 @@ public abstract class AbstractPaceFunctions {
//doi prefix for normalization
public final String DOI_PREFIX = "(https?:\\/\\/dx\\.doi\\.org\\/)|(doi:)";
private Pattern numberPattern = Pattern.compile("-?\\d+(\\.\\d+)?");
protected final static FieldList EMPTY_FIELD = new FieldListImpl();
protected String concat(final List<String> l) {
@ -92,7 +95,18 @@ public abstract class AbstractPaceFunctions {
}
protected String getNumbers(final String s) {
return s.replaceAll("\\D", "");
final StringBuilder sb = new StringBuilder();
for (final String t : s.split(" ")) {
sb.append(isNumber(t)? t : "");
}
return sb.toString();
}
public boolean isNumber(String strNum) {
if (strNum == null) {
return false;
}
return numberPattern.matcher(strNum).matches();
}
protected static String fixAliases(final String s) {

4
dnet-pace-core/src/main/java/eu/dnetlib/pace/tree/NumbersMatch.java
View File

@ -17,9 +17,13 @@ public class NumbersMatch extends AbstractComparator {
@Override
public double distance(String a, String b, Config conf) {
//extracts numbers from the field
String numbers1 = getNumbers(nfd(a));
String numbers2 = getNumbers(nfd(b));
if (numbers1.isEmpty() && numbers2.isEmpty())
return 1.0;
if (numbers1.isEmpty() || numbers2.isEmpty())
return -1.0;

35
dnet-pace-core/src/main/java/eu/dnetlib/pace/tree/RomansMatch.java Normal file
View File

@ -0,0 +1,35 @@
package eu.dnetlib.pace.tree;
import eu.dnetlib.pace.config.Config;
import eu.dnetlib.pace.tree.support.AbstractComparator;
import eu.dnetlib.pace.tree.support.ComparatorClass;
import java.util.Map;
@ComparatorClass("romansMatch")
public class RomansMatch extends AbstractComparator {
public RomansMatch(Map<String, String> params) {
super(params);
}
@Override
public double distance(String a, String b, Config conf) {
//extracts romans from the field
String romans1 = getRomans(nfd(a));
String romans2 = getRomans(nfd(b));
if (romans1.isEmpty() && romans2.isEmpty())
return 1.0;
if (romans1.isEmpty() || romans2.isEmpty())
return -1.0;
if (romans1.equals(romans2))
return 1.0;
return 0.0;
}
}

1
dnet-pace-core/src/main/resources/eu/dnetlib/pace/config/stopwords_de.txt
View File

@ -11,7 +11,6 @@ ag
alle
allein
allem
allen
aller
allerdings
alles

45
dnet-pace-core/src/test/java/eu/dnetlib/pace/comparators/ComparatorTest.java
View File

@ -54,28 +54,9 @@ public class ComparatorTest extends AbstractPaceFunctions {
//particular cases
assertEquals(1.0, cityMatch.distance("Free University of Bozen-Bolzano", "Università di Bolzano", conf));
assertEquals(1.0, cityMatch.distance("Politechniki Warszawskiej (Warsaw University of Technology)", "Warsaw University of Technology", conf));
assertEquals(-1.0, cityMatch.distance("Allen (United States)", "United States Military Academy", conf));
}
// @Test
// public void testJaroWinklerNormalizedName6() {
//
// final JaroWinklerNormalizedName jaroWinklerNormalizedName = new JaroWinklerNormalizedName(params);
// double result = jaroWinklerNormalizedName.distance("Fonds zur Förderung der wissenschaftlichen Forschung (Austrian Science Fund)", "Fonds zur Förderung der wissenschaftlichen Forschung", conf);
//
// System.out.println("result = " + result);
// assertTrue(result > 0.9);
//
// }
// @Test
// public void testJaroWinklerNormalizedName10(){
//
// final JaroWinklerNormalizedName jaroWinklerNormalizedName = new JaroWinklerNormalizedName(params);
//
// double result = jaroWinklerNormalizedName.distance("Firenze University Press", "University of Florence", conf);
//
// System.out.println("result = " + result);
// }
@Test
public void keywordMatchTest(){
params.put("threshold", "0.5");
@ -88,6 +69,10 @@ public class ComparatorTest extends AbstractPaceFunctions {
assertEquals(1.0, keywordMatch.distance("Istanbul Commerce University", "İstanbul Ticarət Universiteti", conf));
assertEquals(1.0, keywordMatch.distance("Franklin College", "Concordia College", conf));
assertEquals(0.0, keywordMatch.distance("University of Georgia", "Georgia State University", conf));
assertEquals(0.0, keywordMatch.distance("University College London", "University of London", conf));
assertEquals(0.0, keywordMatch.distance("Washington State University", "University of Washington", conf));
assertEquals(-1.0, keywordMatch.distance("Allen (United States)", "United States Military Academy", conf));
}
@ -108,7 +93,27 @@ public class ComparatorTest extends AbstractPaceFunctions {
final NumbersMatch numbersMatch = new NumbersMatch(params);
assertEquals(0.0, numbersMatch.distance("University of Rennes 2", "Universita di Rennes 7", conf));
assertEquals(1.0, numbersMatch.distance("Universit<C9><U3> de Rennes 2", "Universita di Rennes 2", conf));
}
@Test
public void romansMatchTest(){
final RomansMatch romansMatch = new RomansMatch(params);
assertEquals(-1.0, romansMatch.distance("University of Paris X", "Universita di Parigi", conf));
assertEquals(0.0, romansMatch.distance("University of Paris IX", "University of Paris X", conf));
assertEquals(1.0, romansMatch.distance("University of Paris VII", "University of Paris VII", conf));
}
@Test
public void jaroWinklerNormalizedNameTest() {
final JaroWinklerNormalizedName jaroWinklerNormalizedName = new JaroWinklerNormalizedName(params);
double result = jaroWinklerNormalizedName.distance("AT&T (United States)", "United States Military Academy", conf);
System.out.println("result = " + result);
}
}

2
dnet-pace-core/src/test/resources/eu/dnetlib/pace/config/organization.current.conf
View File

@ -33,7 +33,7 @@
"legalname" : []
},
"synonyms": {
"key::1": ["university","università","università studi","universitario","universitaria","université","universitaire","universitaires","universidad","universitade","Universität","universitaet","Uniwersytet","университет","universiteit","πανεπιστήμιο","universitesi","universiteti"],
"key::1": ["university","università","università studi","universitario","universitaria","université","universitaire","universitaires","universidad","universitade","Universität","universitaet","Uniwersytet","университет","universiteit","πανεπιστήμιο","universitesi","universiteti", "universiti"],
"key::2": ["studies","studi","études","estudios","estudos","Studien","studia","исследования","studies","σπουδές"],
"key::3": ["advanced","superiore","supérieur","supérieure","supérieurs","supérieures","avancado","avancados","fortgeschrittene","fortgeschritten","zaawansowany","передовой","gevorderd","gevorderde","προχωρημένος","προχωρημένη","προχωρημένο","προχωρημένες","προχωρημένα","wyzsza"],
"key::4": ["institute","istituto","institut","instituto","instituto","Institut","instytut","институт","instituut","ινστιτούτο"],