413 lines
17 KiB
Java
413 lines
17 KiB
Java
package eu.dnetlib.organizations.controller;
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import java.io.IOException;
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import java.time.OffsetDateTime;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.Collection;
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import java.util.List;
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import java.util.Map;
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import java.util.Optional;
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import java.util.Set;
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import java.util.TreeMap;
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import java.util.TreeSet;
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import java.util.stream.Stream;
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import javax.servlet.http.HttpServletResponse;
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import org.apache.commons.lang3.StringUtils;
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import org.springframework.beans.factory.annotation.Autowired;
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import org.springframework.data.domain.Page;
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import org.springframework.data.domain.PageRequest;
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import org.springframework.security.core.Authentication;
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import org.springframework.web.bind.annotation.GetMapping;
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import org.springframework.web.bind.annotation.PathVariable;
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import org.springframework.web.bind.annotation.PostMapping;
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import org.springframework.web.bind.annotation.RequestBody;
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import org.springframework.web.bind.annotation.RequestMapping;
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import org.springframework.web.bind.annotation.RequestParam;
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import org.springframework.web.bind.annotation.RestController;
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import eu.dnetlib.common.controller.AbstractDnetController;
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import eu.dnetlib.organizations.model.JournalEntry;
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import eu.dnetlib.organizations.model.Note;
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import eu.dnetlib.organizations.model.OpenaireDuplicate;
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import eu.dnetlib.organizations.model.utils.BrowseEntry;
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import eu.dnetlib.organizations.model.utils.OrganizationConflict;
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import eu.dnetlib.organizations.model.view.ConflictGroupView;
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import eu.dnetlib.organizations.model.view.DuplicateGroupView;
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import eu.dnetlib.organizations.model.view.OpenaireDuplicateView;
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import eu.dnetlib.organizations.model.view.OrganizationInfoView;
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import eu.dnetlib.organizations.model.view.OrganizationSimpleView;
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import eu.dnetlib.organizations.model.view.OrganizationView;
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import eu.dnetlib.organizations.repository.JournalEntryRepository;
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import eu.dnetlib.organizations.repository.NoteRepository;
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import eu.dnetlib.organizations.repository.UserCountryRepository;
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import eu.dnetlib.organizations.repository.readonly.ConflictGroupViewRepository;
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import eu.dnetlib.organizations.repository.readonly.DuplicateGroupViewRepository;
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import eu.dnetlib.organizations.repository.readonly.OpenaireDuplicateViewRepository;
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import eu.dnetlib.organizations.repository.readonly.OrganizationInfoViewRepository;
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import eu.dnetlib.organizations.repository.readonly.OrganizationSimpleViewRepository;
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import eu.dnetlib.organizations.repository.readonly.OrganizationViewRepository;
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import eu.dnetlib.organizations.repository.readonly.SuggestionInfoViewByCountryRepository;
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import eu.dnetlib.organizations.utils.CSVConverter;
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import eu.dnetlib.organizations.utils.DatabaseUtils;
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import eu.dnetlib.organizations.utils.OrganizationStatus;
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@RestController
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@RequestMapping("/api/organizations")
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public class OrganizationController extends AbstractDnetController {
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private static final String SPECIAL_STATUS_FOR_CANDIDATE_DUP = "candidate_dup";
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@Autowired
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private OrganizationViewRepository organizationViewRepository;
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@Autowired
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private OrganizationInfoViewRepository organizationInfoViewRepository;
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@Autowired
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private OrganizationSimpleViewRepository organizationSimpleViewRepository;
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@Autowired
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private OpenaireDuplicateViewRepository openaireDuplicateViewRepository;
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@Autowired
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private ConflictGroupViewRepository conflictGroupViewRepository;
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@Autowired
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private SuggestionInfoViewByCountryRepository suggestionInfoViewByCountryRepository;
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@Autowired
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private UserCountryRepository userCountryRepository;
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@Autowired
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private DuplicateGroupViewRepository duplicateGroupViewRepository;
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@Autowired
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private NoteRepository noteRepository;
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@Autowired
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private JournalEntryRepository journalEntryRepository;
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@Autowired
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private DatabaseUtils databaseUtils;
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@PostMapping("/save")
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public List<String> save(@RequestBody final OrganizationView org, final Authentication authentication) {
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if (StringUtils.isBlank(org.getName())) {
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throw new RuntimeException("Missing field: name");
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} else if (StringUtils.isBlank(org.getCountry())) {
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throw new RuntimeException("Missing field: country");
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} else if (StringUtils.isBlank(org.getType())) {
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throw new RuntimeException("Missing field: type");
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} else if (UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForCountry(org.getCountry(), UserInfo.getEmail(authentication))) {
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final String orgId =
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databaseUtils.insertOrUpdateOrganization(org, UserInfo.getEmail(authentication), UserInfo.isSimpleUser(authentication));
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return Arrays.asList(orgId);
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping("/info")
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public OrganizationInfoView infoById(@RequestParam final String id, final Authentication authentication) {
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return organizationInfoViewRepository.findById(id).get();
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}
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@GetMapping("/suggestionsInfo")
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public SuggestionInfo suggestionsInfo(final Authentication authentication) {
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final SuggestionInfo info = new SuggestionInfo();
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if (UserInfo.isSuperAdmin(authentication)) {
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suggestionInfoViewByCountryRepository.findAll().forEach(info::add);
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} else if (UserInfo.isSimpleUser(authentication) || UserInfo.isNationalAdmin(authentication)) {
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userCountryRepository.getCountriesForUser(UserInfo.getEmail(authentication))
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.stream()
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.map(suggestionInfoViewByCountryRepository::findById)
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.filter(Optional::isPresent)
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.map(Optional::get)
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.forEach(info::add);
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}
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return info;
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}
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@GetMapping("/get")
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public OrganizationView findById(@RequestParam final String id, final Authentication authentication) {
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final OrganizationView org = organizationViewRepository.findById(id).get();
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if (UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForCountry(org.getCountry(), UserInfo.getEmail(authentication))) {
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return org;
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping("/conflicts")
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public List<OrganizationConflict> conflicts(@RequestParam final String id, final Authentication authentication) {
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if (UserInfo.isSuperAdmin(authentication) || userCountryRepository.verifyAuthorizationForId(id, UserInfo.getEmail(authentication))) {
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return databaseUtils.listConflictsForId(id);
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping("/duplicates")
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public List<OpenaireDuplicateView> duplicates(@RequestParam final String id, final Authentication authentication) {
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if (UserInfo.isSuperAdmin(authentication) || userCountryRepository.verifyAuthorizationForId(id, UserInfo.getEmail(authentication))) {
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return listDuplicates(id);
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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private List<OpenaireDuplicateView> listDuplicates(final String id) {
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return openaireDuplicateViewRepository.findByLocalId(id);
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}
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@GetMapping("/conflicts/byCountry/{country}")
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public Collection<Set<OrganizationConflict>> findConflictsByCountry(@PathVariable final String country, final Authentication authentication) {
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if (UserInfo.isSuperAdmin(authentication)) {
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return groupConflicts(conflictGroupViewRepository.findByCountry1OrCountry2(country, country).stream());
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} else if (UserInfo.isSimpleUser(authentication) || UserInfo.isNationalAdmin(authentication)) {
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final Stream<ConflictGroupView> list = userCountryRepository.getCountriesForUser(UserInfo.getEmail(authentication))
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.stream()
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.filter(country::equalsIgnoreCase)
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.map(c -> conflictGroupViewRepository.findByCountry1OrCountry2(c, c).stream())
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.findFirst()
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.orElse(Stream.empty());
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return groupConflicts(list);
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping("/duplicates/byCountry/{country}")
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public Iterable<DuplicateGroupView> findDuplicatesByCountry(@PathVariable final String country, final Authentication authentication) {
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if (UserInfo.isSuperAdmin(authentication)) {
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return duplicateGroupViewRepository.findByCountry(country);
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} else if (UserInfo.isSimpleUser(authentication) || UserInfo.isNationalAdmin(authentication)) {
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return userCountryRepository.getCountriesForUser(UserInfo.getEmail(authentication))
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.stream()
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.filter(country::equalsIgnoreCase)
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.map(duplicateGroupViewRepository::findByCountry)
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.findFirst()
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.orElse(new ArrayList<DuplicateGroupView>());
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping(value = "/duplicates/byCountry/{country}/csv", produces = "text/csv")
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public void findDuplicatesByCountryCSV(@PathVariable final String country, final HttpServletResponse res, final Authentication authentication)
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throws IOException {
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final Iterable<DuplicateGroupView> list = findDuplicatesByCountry(country, authentication);
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CSVConverter.writeCSV(res.getOutputStream(), list, DuplicateGroupView.class, "id", "name", "city", "country", "numberOfDuplicates");
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}
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private Collection<Set<OrganizationConflict>> groupConflicts(final Stream<ConflictGroupView> stream) {
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final Map<String, Set<OrganizationConflict>> map = new TreeMap<>();
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stream.forEach(c -> {
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if (!map.containsKey(c.getGroup())) {
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map.put(c.getGroup(), new TreeSet<>());
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}
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map.get(c.getGroup()).add(new OrganizationConflict(c.getId1(), c.getName1(), c.getType1(), c.getCity1(), c.getCountry1()));
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map.get(c.getGroup()).add(new OrganizationConflict(c.getId2(), c.getName2(), c.getType2(), c.getCity2(), c.getCountry2()));
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});
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return map.values();
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}
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@PostMapping("/duplicates")
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public List<OpenaireDuplicateView> duplicates(@RequestBody final List<OpenaireDuplicate> simrels, final Authentication authentication) {
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if (simrels.isEmpty()) { return new ArrayList<>(); }
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final boolean b = UserInfo.isSuperAdmin(authentication)
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|| simrels.stream()
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.map(OpenaireDuplicate::getLocalId)
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.distinct()
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.allMatch(id -> userCountryRepository.verifyAuthorizationForId(id, UserInfo.getEmail(authentication)));
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if (b) {
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databaseUtils.saveDuplicates(simrels, UserInfo.getEmail(authentication));
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return listDuplicates(simrels.get(0).getLocalId());
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping("/search/{page}/{size}")
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public Page<OrganizationSimpleView> search(@PathVariable final int page,
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@PathVariable final int size,
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@RequestParam final String q,
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@RequestParam(required = false, defaultValue = "") final String status,
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final Authentication authentication) {
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if (status.equals(SPECIAL_STATUS_FOR_CANDIDATE_DUP)) {
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return UserInfo.isSuperAdmin(authentication)
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? organizationSimpleViewRepository.searchCandidateDuplicates(q, PageRequest.of(page, size))
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: organizationSimpleViewRepository.searchCandidateDuplicatesForUser(q, UserInfo.getEmail(authentication), PageRequest.of(page, size));
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} else {
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final List<String> statuses;
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if (StringUtils.isNotBlank(status)) {
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statuses = Arrays.asList(status.split(","));
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} else if (UserInfo.isSimpleUser(authentication)) {
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statuses = Arrays.asList(OrganizationStatus.approved.toString());
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} else {
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statuses = Arrays.asList(OrganizationStatus.approved.toString(), OrganizationStatus.suggested.toString());
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}
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return UserInfo.isSuperAdmin(authentication)
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? organizationSimpleViewRepository.search(q, statuses, PageRequest.of(page, size))
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: organizationSimpleViewRepository.searchForUser(q, UserInfo.getEmail(authentication), statuses, PageRequest.of(page, size));
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}
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}
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@GetMapping("/byCountry/{status}/{code}/{page}/{size}")
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public Page<OrganizationSimpleView> findByCountry(@PathVariable final String status,
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@PathVariable final String code,
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@PathVariable final int page,
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@PathVariable final int size,
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final Authentication authentication) {
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if (UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForCountry(code, UserInfo.getEmail(authentication))) {
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if (status.equalsIgnoreCase("all")) {
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return organizationSimpleViewRepository.findByCountryOrderByName(code, PageRequest.of(page, size));
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} else {
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return organizationSimpleViewRepository.findByCountryAndStatusOrderByName(code, status, PageRequest.of(page, size));
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}
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping("/byCountry/{status}/{code}")
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public Iterable<OrganizationSimpleView> findOrgsByStatusAndCountry(@PathVariable final String status,
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@PathVariable final String code,
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final Authentication authentication) {
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if (UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForCountry(code, UserInfo.getEmail(authentication))) {
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if (status.equalsIgnoreCase("all")) {
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return organizationSimpleViewRepository.findByCountryOrderByName(code);
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} else {
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return organizationSimpleViewRepository.findByCountryAndStatusOrderByName(code, status);
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}
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping(value = "/byCountry/{status}/{code}/csv", produces = "text/csv")
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public void findOrgsByStatusAndCountryCSV(@PathVariable final String status,
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@PathVariable final String code,
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final HttpServletResponse res,
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final Authentication authentication) throws IOException {
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final Iterable<OrganizationSimpleView> list = findOrgsByStatusAndCountry(status, code, authentication);
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CSVConverter.writeCSV(res
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.getOutputStream(), list, OrganizationSimpleView.class, "id", "name", "type", "city", "country", "acronyms", "urls", "status", "nSimilarDups", "nSuggestedDups", "nDifferentDups");
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}
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@GetMapping("/byType/{status}/{type}/{page}/{size}")
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public Page<OrganizationSimpleView> findByType(@PathVariable final String status,
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@PathVariable final String type,
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@PathVariable final int page,
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@PathVariable final int size,
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final Authentication authentication) {
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if (UserInfo.isSuperAdmin(authentication)) {
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if (status.equalsIgnoreCase("all")) {
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return organizationSimpleViewRepository.findByTypeOrderByName(type, PageRequest.of(page, size));
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} else {
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return organizationSimpleViewRepository.findByTypeAndStatusOrderByName(type, status, PageRequest.of(page, size));
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}
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} else {
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if (status.equalsIgnoreCase("all")) {
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return organizationSimpleViewRepository.findByTypeForUser(type, UserInfo.getEmail(authentication), PageRequest.of(page, size));
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} else {
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return organizationSimpleViewRepository
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.findByTypeAndStatusForUser(type, status, UserInfo.getEmail(authentication), PageRequest.of(page, size));
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}
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}
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}
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@GetMapping("/browse/countries")
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public List<BrowseEntry> browseCountries(final Authentication authentication) {
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return UserInfo.isSuperAdmin(authentication)
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? databaseUtils.browseCountries()
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: databaseUtils.browseCountriesForUser(UserInfo.getEmail(authentication));
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}
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@GetMapping("/browse/types")
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public List<BrowseEntry> browseOrganizationTypes(final Authentication authentication) {
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return UserInfo.isSuperAdmin(authentication)
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? databaseUtils.browseTypes()
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: databaseUtils.browseTypesForUser(UserInfo.getEmail(authentication));
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}
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@PostMapping("/conflicts/fix/similar")
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public List<String> fixConflictSim(final Authentication authentication, @RequestBody final List<String> ids) {
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if (ids.size() > 1 && UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForId(ids.get(0), UserInfo.getEmail(authentication))) {
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final String newOrgId = databaseUtils.fixConflictSimilars(ids, UserInfo.getEmail(authentication));
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return Arrays.asList(newOrgId);
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} else {
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return new ArrayList<>();
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}
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}
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@PostMapping("/conflicts/fix/different")
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public List<String> fixConflictDiff(final Authentication authentication, @RequestBody final List<String> ids) {
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if (ids.size() > 1 && UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForId(ids.get(0), UserInfo.getEmail(authentication))) {
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databaseUtils.fixConflictDifferents(ids, UserInfo.getEmail(authentication));
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return ids;
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} else {
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return new ArrayList<>();
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}
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}
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@GetMapping("/note")
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public Note noteById(@RequestParam final String id, final Authentication authentication) {
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final OrganizationView org = organizationViewRepository.findById(id).get();
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if (UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForCountry(org.getCountry(), UserInfo.getEmail(authentication))) {
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return noteRepository.findById(id).orElse(new Note(id, "", null, null));
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@PostMapping("/note")
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public Note saveNote(@RequestBody final Note note, final Authentication authentication) {
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final String orgId = note.getOrgId();
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final OrganizationView org = organizationViewRepository.findById(orgId).get();
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if (UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForCountry(org.getCountry(), UserInfo.getEmail(authentication))) {
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if (StringUtils.isNotBlank(note.getNote())) {
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note.setModifiedBy(UserInfo.getEmail(authentication));
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note.setModificationDate(OffsetDateTime.now());
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return noteRepository.save(note);
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} else {
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noteRepository.deleteById(orgId);
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return new Note(orgId, "", null, null);
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}
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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@GetMapping("/journal")
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public List<JournalEntry> journalEntriesById(@RequestParam final String id, final Authentication authentication) {
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final OrganizationView org = organizationViewRepository.findById(id).get();
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if (UserInfo.isSuperAdmin(authentication)
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|| userCountryRepository.verifyAuthorizationForCountry(org.getCountry(), UserInfo.getEmail(authentication))) {
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return journalEntryRepository.findByOrgIdOrderByDateDesc(id);
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} else {
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throw new RuntimeException("User not authorized");
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}
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}
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}
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