added creationDate and hdfsPath fields
This commit is contained in:
parent
7b5d26ada1
commit
40c3ee37ef
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@ -0,0 +1,12 @@
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1) Usare un client hdfs per cancellare le stores
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2) sostiuire il metodo expiredVersion s deleteVersions con un metodo solo che cancelli anche su hdfs
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3) Non consentire operazioni lettura e scrittura sulle store in prepareDelete
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4) Aggiungere il path hdfs delle store nelle versions e nella store (parent come property)
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5) metodo info con alcune props
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alter table mdstores add column creation_date timestamp;
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alter table mdstores add column hdfs_path text;
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alter table mdstore_versions add column hdfs_path text;
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drop view mdstores_with_info;
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@ -3,8 +3,6 @@
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xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
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<parent>
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<groupId>eu.dnetlib.dhp</groupId>
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<artifactId>apps</artifactId>
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@ -16,7 +14,6 @@
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<artifactId>dhp-mdstore-manager</artifactId>
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<packaging>jar</packaging>
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<!-- Add typical dependencies for a web application -->
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<dependencies>
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<dependency>
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@ -44,6 +41,17 @@
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<dependency>
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<groupId>eu.dnetlib.dhp</groupId>
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<artifactId>dhp-common</artifactId>
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<version>1.2.4-SNAPSHOT</version>
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<exclusions>
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<exclusion>
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<groupId>eu.dnetlib</groupId>
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<artifactId>dnet-pace-core</artifactId>
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</exclusion>
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<exclusion>
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<groupId>eu.dnetlib.dhp</groupId>
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<artifactId>dhp-schemas</artifactId>
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</exclusion>
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</exclusions>
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</dependency>
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<!-- JUnit -->
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@ -9,6 +9,7 @@ import javax.transaction.Transactional;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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import org.springframework.beans.factory.annotation.Autowired;
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import org.springframework.beans.factory.annotation.Value;
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import org.springframework.jdbc.core.JdbcTemplate;
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import org.springframework.stereotype.Service;
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@ -36,6 +37,9 @@ public class DatabaseUtils {
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@Autowired
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private JdbcTemplate jdbcTemplate;
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@Value("${dhp.mdstore-manager.hdfs.base-path}")
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private String hdfsBasePath;
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private static final Logger log = LoggerFactory.getLogger(DatabaseUtils.class);
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public Iterable<MDStoreWithInfo> listMdStores() {
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@ -71,10 +75,10 @@ public class DatabaseUtils {
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final String dsId,
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final String apiId) {
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final MDStore md = MDStore.newInstance(format, layout, interpretation, dsName, dsId, apiId);
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final MDStore md = MDStore.newInstance(format, layout, interpretation, dsName, dsId, apiId, hdfsBasePath);
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mdstoreRepository.save(md);
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final MDStoreVersion v = MDStoreVersion.newInstance(md.getId(), false);
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final MDStoreVersion v = MDStoreVersion.newInstance(md.getId(), false, hdfsBasePath);
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v.setLastUpdate(new Date());
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mdstoreVersionRepository.save(v);
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mdstoreCurrentVersionRepository.save(MDStoreCurrentVersion.newInstance(v));
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@ -131,7 +135,7 @@ public class DatabaseUtils {
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@Transactional
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public MDStoreVersion prepareMdStoreVersion(final String mdId) {
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final MDStoreVersion v = MDStoreVersion.newInstance(mdId, true);
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final MDStoreVersion v = MDStoreVersion.newInstance(mdId, true, hdfsBasePath);
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mdstoreVersionRepository.save(v);
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return v;
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}
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@ -0,0 +1,149 @@
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<?xml version="1.0" encoding="UTF-8"?>
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<!--Autogenerated by Cloudera Manager-->
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<configuration>
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<property>
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<name>fs.defaultFS</name>
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<value>hdfs://hadoop-rm1.garr-pa1.d4science.org:8020</value>
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</property>
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<property>
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<name>fs.trash.interval</name>
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<value>1440</value>
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</property>
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<property>
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<name>fs.trash.checkpoint.interval</name>
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<value>60</value>
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</property>
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<property>
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<name>net.topology.script.file.name</name>
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<value>{{CMF_CONF_DIR}}/topology.py</value>
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</property>
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<property>
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<name>hadoop.security.authentication</name>
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<value>simple</value>
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</property>
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<property>
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<name>hadoop.security.authorization</name>
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<value>false</value>
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</property>
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<property>
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<name>hadoop.rpc.protection</name>
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<value>authentication</value>
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</property>
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<property>
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<name>hadoop.ssl.enabled</name>
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<value>false</value>
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</property>
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<property>
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<name>hadoop.ssl.require.client.cert</name>
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<value>false</value>
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<final>true</final>
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</property>
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<property>
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<name>hadoop.ssl.keystores.factory.class</name>
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<value>org.apache.hadoop.security.ssl.FileBasedKeyStoresFactory</value>
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<final>true</final>
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</property>
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<property>
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<name>hadoop.ssl.server.conf</name>
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<value>ssl-server.xml</value>
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<final>true</final>
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</property>
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<property>
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<name>hadoop.ssl.client.conf</name>
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<value>ssl-client.xml</value>
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<final>true</final>
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</property>
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<property>
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<name>hadoop.security.auth_to_local</name>
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<value>DEFAULT</value>
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</property>
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<property>
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<name>hadoop.proxyuser.oozie.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.oozie.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.mapred.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.mapred.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.flume.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.flume.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.HTTP.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.HTTP.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.hive.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.hive.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.hue.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.hue.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.httpfs.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.httpfs.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hue.kerberos.principal.shortname</name>
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<value>hue</value>
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</property>
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<property>
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<name>hadoop.proxyuser.hdfs.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.hdfs.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.yarn.hosts</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.proxyuser.yarn.groups</name>
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<value>*</value>
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</property>
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<property>
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<name>hadoop.security.group.mapping</name>
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<value>org.apache.hadoop.security.ShellBasedUnixGroupsMapping</value>
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</property>
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<property>
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<name>hadoop.security.instrumentation.requires.admin</name>
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<value>false</value>
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</property>
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<property>
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<name>hadoop.http.logs.enabled</name>
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<value>true</value>
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</property>
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</configuration>
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@ -0,0 +1,217 @@
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<?xml version="1.0" encoding="UTF-8"?>
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<!--Autogenerated by Cloudera Manager-->
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<configuration>
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<property>
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<name>dfs.hosts</name>
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<value>{{CMF_CONF_DIR}}/dfs_all_hosts.txt</value>
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</property>
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<property>
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<name>dfs.namenode.hosts.provider.classname</name>
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<value>org.apache.hadoop.hdfs.server.blockmanagement.CombinedHostFileManager</value>
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</property>
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<property>
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<name>dfs.namenode.name.dir</name>
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<value>file:///dfs/nn</value>
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</property>
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<property>
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<name>dfs.namenode.servicerpc-address</name>
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<value>hadoop-rm1.garr-pa1.d4science.org:8022</value>
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</property>
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<property>
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<name>dfs.namenode.rpc-address</name>
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<value>hadoop-rm1.garr-pa1.d4science.org:8020</value>
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</property>
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<property>
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<name>dfs.https.address</name>
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<value>hadoop-rm1.garr-pa1.d4science.org:50470</value>
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</property>
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<property>
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<name>dfs.https.port</name>
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<value>50470</value>
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</property>
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<property>
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<name>dfs.namenode.http-address</name>
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<value>hadoop-rm1.garr-pa1.d4science.org:50070</value>
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</property>
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<property>
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<name>dfs.namenode.secondary.http-address</name>
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<value>hadoop-rm2.garr-pa1.d4science.org:50090</value>
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</property>
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<property>
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<name>dfs.permissions.superusergroup</name>
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<value>supergroup</value>
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</property>
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<property>
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<name>dfs.replication</name>
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<value>2</value>
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</property>
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<property>
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<name>dfs.namenode.replication.min</name>
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<value>1</value>
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</property>
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<property>
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<name>dfs.replication.max</name>
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<value>512</value>
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</property>
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<property>
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<name>dfs.namenode.maintenance.replication.min</name>
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<value>1</value>
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</property>
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<property>
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<name>dfs.blocksize</name>
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<value>134217728</value>
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</property>
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<property>
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<name>dfs.image.transfer.timeout</name>
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<value>60000</value>
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</property>
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<property>
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<name>dfs.image.transfer.bandwidthPerSec</name>
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<value>0</value>
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</property>
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<property>
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<name>dfs.namenode.plugins</name>
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<value></value>
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</property>
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<property>
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<name>dfs.namenode.handler.count</name>
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<value>59</value>
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</property>
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<property>
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<name>dfs.namenode.service.handler.count</name>
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<value>59</value>
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</property>
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<property>
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<name>dfs.namenode.name.dir.restore</name>
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<value>false</value>
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</property>
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<property>
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<name>dfs.thrift.threads.max</name>
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<value>20</value>
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</property>
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<property>
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<name>dfs.thrift.threads.min</name>
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<value>10</value>
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</property>
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<property>
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<name>dfs.thrift.timeout</name>
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<value>60</value>
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</property>
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<property>
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<name>dfs.webhdfs.enabled</name>
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<value>true</value>
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</property>
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<property>
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<name>dfs.permissions</name>
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<value>true</value>
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</property>
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<property>
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<name>dfs.namenode.safemode.threshold-pct</name>
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<value>0.999</value>
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</property>
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<property>
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<name>dfs.namenode.invalidate.work.pct.per.iteration</name>
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<value>0.32</value>
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</property>
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<property>
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<name>dfs.namenode.replication.work.multiplier.per.iteration</name>
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<value>10</value>
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</property>
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<property>
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<name>dfs.namenode.replication.max-streams</name>
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<value>20</value>
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</property>
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<property>
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<name>dfs.namenode.replication.max-streams-hard-limit</name>
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<value>40</value>
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</property>
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<property>
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<name>dfs.namenode.avoid.read.stale.datanode</name>
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<value>false</value>
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</property>
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<property>
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<name>dfs.namenode.snapshot.capture.openfiles</name>
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<value>false</value>
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</property>
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<property>
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<name>dfs.namenode.avoid.write.stale.datanode</name>
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<value>false</value>
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</property>
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<property>
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<name>dfs.namenode.stale.datanode.interval</name>
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<value>30000</value>
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</property>
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<property>
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<name>dfs.namenode.write.stale.datanode.ratio</name>
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<value>0.5</value>
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</property>
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<property>
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<name>dfs.namenode.safemode.min.datanodes</name>
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<value>1</value>
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</property>
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<property>
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<name>dfs.namenode.safemode.extension</name>
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<value>30000</value>
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</property>
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<property>
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<name>dfs.client.use.datanode.hostname</name>
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<value>false</value>
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</property>
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<property>
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<name>fs.permissions.umask-mode</name>
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<value>022</value>
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</property>
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<property>
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<name>dfs.encrypt.data.transfer</name>
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<value>false</value>
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</property>
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<property>
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<name>dfs.encrypt.data.transfer.algorithm</name>
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<value>rc4</value>
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</property>
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<property>
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<name>dfs.namenode.acls.enabled</name>
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<value>false</value>
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</property>
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<property>
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<name>dfs.access.time.precision</name>
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<value>3600000</value>
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</property>
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<property>
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<name>dfs.qjournal.write-txns.timeout.ms</name>
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<value>20000</value>
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</property>
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<property>
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<name>dfs.qjournal.start-segment.timeout.ms</name>
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<value>20000</value>
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</property>
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<property>
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<name>dfs.qjournal.prepare-recovery.timeout.ms</name>
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<value>120000</value>
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</property>
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<property>
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<name>dfs.qjournal.accept-recovery.timeout.ms</name>
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<value>120000</value>
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</property>
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<property>
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<name>dfs.qjournal.finalize-segment.timeout.ms</name>
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<value>120000</value>
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</property>
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<property>
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<name>dfs.qjournal.select-input-streams.timeout.ms</name>
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<value>20000</value>
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</property>
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<property>
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<name>dfs.qjournal.get-journal-state.timeout.ms</name>
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<value>120000</value>
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</property>
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<property>
|
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<name>dfs.qjournal.new-epoch.timeout.ms</name>
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<value>120000</value>
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</property>
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<property>
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<name>dfs.datanode.hdfs-blocks-metadata.enabled</name>
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<value>true</value>
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</property>
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</configuration>
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|
|
@ -20,3 +20,6 @@ spring.jpa.open-in-view=true
|
|||
|
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# logs
|
||||
logging.level.io.swagger.models.parameters.AbstractSerializableParameter = error
|
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|
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dhp.mdstore-manager.hdfs.base-path = /tmp/mdstoremanager_dev
|
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|
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|
|
|
|||
|
|
@ -10,7 +10,9 @@ CREATE TABLE mdstores (
|
|||
interpretation text,
|
||||
datasource_name text,
|
||||
datasource_id text,
|
||||
api_id text
|
||||
api_id text,
|
||||
creation_date timestamp,
|
||||
hdfs_path text
|
||||
);
|
||||
|
||||
CREATE TABLE mdstore_versions (
|
||||
|
|
@ -19,7 +21,8 @@ CREATE TABLE mdstore_versions (
|
|||
writing boolean,
|
||||
readcount int,
|
||||
lastupdate timestamp,
|
||||
size bigint
|
||||
size bigint,
|
||||
hdfs_path text
|
||||
);
|
||||
|
||||
CREATE TABLE mdstore_current_versions (
|
||||
|
|
@ -35,6 +38,8 @@ CREATE VIEW mdstores_with_info AS SELECT
|
|||
md.datasource_name AS datasource_name,
|
||||
md.datasource_id AS datasource_id,
|
||||
md.api_id AS api_id,
|
||||
md.hdfs_path as hdfs_path,
|
||||
md.creation_date as creation_date,
|
||||
cv.current_version AS current_version,
|
||||
v1.lastupdate AS lastupdate,
|
||||
v1.size AS size,
|
||||
|
|
@ -42,15 +47,17 @@ CREATE VIEW mdstores_with_info AS SELECT
|
|||
FROM
|
||||
mdstores md
|
||||
LEFT OUTER JOIN mdstore_current_versions cv ON (md.id = cv.mdstore)
|
||||
LEFT OUTER JOIN mdstore_versions v1 ON (cv.current_version = v1.id)
|
||||
LEFT OUTER JOIN mdstore_versions v2 ON (md.id = v2.mdstore)
|
||||
LEFT OUTER JOIN mdstore_versions v1 ON (cv.current_version = v1.id)
|
||||
LEFT OUTER JOIN mdstore_versions v2 ON (md.id = v2.mdstore)
|
||||
GROUP BY md.id,
|
||||
md.format,
|
||||
md.layout,
|
||||
md.interpretation,
|
||||
md.datasource_name,
|
||||
md.datasource_id,
|
||||
md.hdfs_path,
|
||||
md.creation_date,
|
||||
md.api_id,
|
||||
cv.current_version,
|
||||
v1.lastupdate,
|
||||
v1.size;
|
||||
v1.size;
|
||||
|
|
|
|||
|
|
@ -18,63 +18,71 @@
|
|||
</style>
|
||||
|
||||
<body ng-app="mdstoreManagerApp" ng-controller="mdstoreManagerController">
|
||||
|
||||
<div class="row">
|
||||
<div class="col-xs-12 col-md-offset-1 col-md-10">
|
||||
<h1>Metadata Store Manager</h1>
|
||||
|
||||
<hr />
|
||||
|
||||
<div>
|
||||
<div class="container-fluid">
|
||||
<div class="row">
|
||||
<div class="col-xs-12">
|
||||
<h1>Metadata Store Manager</h1>
|
||||
|
||||
<hr />
|
||||
<a href="/doc" target="_blank">API documentation</a>
|
||||
</div>
|
||||
|
||||
<hr />
|
||||
|
||||
|
||||
<hr />
|
||||
<a href="javascript:void(0)" data-toggle="modal" data-target="#newMdstoreModal">create a new mdstore</a>
|
||||
<hr />
|
||||
|
||||
<table class="table table-striped small">
|
||||
<thead>
|
||||
<tr>
|
||||
<th class="col-xs-4">ID</th>
|
||||
<th class="col-xs-2">Format / Layout / Interpretation</th>
|
||||
<th class="col-xs-3">Datasource</th>
|
||||
<th class="col-xs-1 text-center">Last Update</th>
|
||||
<th class="col-xs-1 text-right">Size</th>
|
||||
<th class="col-xs-1 text-right">Versions</th>
|
||||
</tr>
|
||||
</thead>
|
||||
<tbody>
|
||||
<tr>
|
||||
<td colspan="6">
|
||||
<a href="javascript:void(0)" data-toggle="modal" data-target="#newMdstoreModal">create a new mdstore</a>
|
||||
</td>
|
||||
</tr>
|
||||
<tr ng-repeat="md in mdstores">
|
||||
<td><button class="btn btn-xs btn-danger" ng-click="deleteMdstore(md.id)">delete</button> {{md.id}}</td>
|
||||
<td>{{md.format}} / {{md.layout}} / {{md.interpretation}}</td>
|
||||
<td>
|
||||
<span ng-if="md.datasourceName">
|
||||
{{md.datasourceName}}<br />
|
||||
<small>
|
||||
<b>id: </b>{{md.datasourceId}}
|
||||
<b>api: </b>{{md.apiId}}
|
||||
</small>
|
||||
</span>
|
||||
</td>
|
||||
<td class="text-center" title="{{md.lastUpdate}}">{{md.lastUpdate | date:"MMM dd, yyyy 'at' HH:mm"}}</td>
|
||||
<td class="text-right">{{md.size}}</td>
|
||||
<td class="text-right">
|
||||
<a href="javascript:void(0)" ng-click="listVersions(md.id, md.currentVersion)" data-toggle="modal" data-target="#versionsModal" title="Current: {{md.currentVersion}}">{{md.numberOfVersions}} version(s)</a> /
|
||||
<a href="javascript:void(0)" ng-click="prepareVersion(md.id, md.currentVersion)" data-toggle="modal" data-target="#versionsModal">new</a>
|
||||
</td>
|
||||
|
||||
</tr>
|
||||
</tbody>
|
||||
</table>
|
||||
<p ng-show="mdstores.length > 0">
|
||||
<input type="text" class="form-control form-control-sm" ng-model="mdstoreFilter" placeholder="Filter..."/>
|
||||
</p>
|
||||
|
||||
<div class="panel panel-primary" ng-repeat="md in mdstores | filter:mdstoreFilter">
|
||||
<div class="panel-heading">{{md.id}}</div>
|
||||
|
||||
<table class="table table-striped small">
|
||||
<tr>
|
||||
<th class="col-xs-4">Format / Layout / Interpretation</th>
|
||||
<td class="col-xs-8">{{md.format}} / {{md.layout}} / {{md.interpretation}}</td>
|
||||
</tr><tr>
|
||||
<th class="col-xs-4">Datasource</th>
|
||||
<td class="col-xs-8">
|
||||
<span ng-if="md.datasourceName">
|
||||
{{md.datasourceName}}<br />
|
||||
<small>
|
||||
<b>id: </b>{{md.datasourceId}}
|
||||
<b>api: </b>{{md.apiId}}
|
||||
</small>
|
||||
</span>
|
||||
</td>
|
||||
</tr><tr>
|
||||
<th class="col-xs-4">Creation Date</th>
|
||||
<td class="col-xs-8" title="{{md.creationDate}}">{{md.creationDate | date:"fullDate"}}</td>
|
||||
</tr><tr>
|
||||
<th class="col-xs-4">Last Update</th>
|
||||
<td class="col-xs-8" title="{{md.lastUpdate}}">{{md.lastUpdate | date:"fullDate"}}</td>
|
||||
</tr><tr>
|
||||
<th class="col-xs-4">Size</th>
|
||||
<td class="col-xs-8">{{md.size}}</td>
|
||||
</tr><tr>
|
||||
<th class="col-xs-4">HDFS Path</th>
|
||||
<td class="col-xs-8">{{md.hdfsPath}}</td>
|
||||
</tr><tr>
|
||||
<th class="col-xs-4">Versions</th>
|
||||
<td class="col-xs-8">
|
||||
<a href="javascript:void(0)" ng-click="listVersions(md.id, md.currentVersion)" data-toggle="modal" data-target="#versionsModal" title="Current: {{md.currentVersion}}">{{md.numberOfVersions}} version(s)</a> /
|
||||
<a href="javascript:void(0)" ng-click="prepareVersion(md.id, md.currentVersion)" data-toggle="modal" data-target="#versionsModal">prepare new</a>
|
||||
</td>
|
||||
</tr>
|
||||
</table>
|
||||
<div class="panel-footer">
|
||||
<button class="btn btn-sm btn-danger" ng-click="deleteMdstore(md.id)">delete</button>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
<!-- Modals -->
|
||||
|
||||
<div class="modal fade" tabindex="-1" id="newMdstoreModal">
|
||||
<div class="modal-dialog modal-lg">
|
||||
<div class="modal-content">
|
||||
|
|
@ -143,7 +151,10 @@
|
|||
</thead>
|
||||
<tbody>
|
||||
<tr ng-repeat="v in versions">
|
||||
<td ng-class="{'text-success': v.current}"><span class="glyphicon glyphicon-pencil" ng-if="v.writing" title="writing..."></span> {{v.id}}</td>
|
||||
<td>
|
||||
<span class="glyphicon glyphicon-pencil" ng-if="v.writing" title="writing..."></span> <span ng-class="{'text-success': v.current}">{{v.id}}</span><br />
|
||||
<span class="small"><b>Path:</b> {{v.hdfsPath}}</span>
|
||||
</td>
|
||||
<td class="text-center">
|
||||
{{v.readCount}}
|
||||
<button class="btn btn-xs btn-warning" ng-click="resetReading(v.id)" ng-disabled="v.readCount == 0">reset</button>
|
||||
|
|
|
|||
Loading…
Reference in New Issue