Merge pull request 'relation-from-odf' (#22) from relation-from-odf into master
Reviewed-on: #22
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47faf312e0
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@ -4,9 +4,10 @@
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| **Version** | **Changes** | **Readiness** |
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|-------------|--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|---------------|
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| 3.15.0 | [Graph model] </br> <ul><li>added w3id as PID type, with ROHub as authority.</li> <ul> | beta |
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| 3.14.0 | [Graph model] </br> <ul><li>introduced specific type for result.subject</li> <ul> | beta |
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| 2.13.0 | [Scholexplorer] </br> <ul><li>update swagger annotation jar version to be compatible with new implementation of openAPI ui</li> <ul> | beta |
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| 2.12.1 | [Graph model] </br> <ul><li>added field oafEntity.eoscifguidelines</li> <ul> | beta |
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| 2.12.1 | [Graph model] </br> <ul><li>added field oafEntity.eoscifguidelines</li> <ul> | production |
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| 2.12.0 | [Graph model] </br> <ul><li>Introducing EOSC Services as datasources</li> <ul> | production |
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| 2.11.33 | [Scholexplorer] </br> <ul><li>Moved Scholix API Data model into dhp-schemas</li><li>implementation of the compareTo method on Scholix objects and all model properties</li> <li>Unit Test to verify that compareTo works on different case</li> <ul> | production |
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| 2.10.31 | [Minor] </br>NPE checks | production |
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2
pom.xml
2
pom.xml
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@ -5,7 +5,7 @@
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<groupId>eu.dnetlib.dhp</groupId>
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<artifactId>dhp-schemas</artifactId>
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<packaging>jar</packaging>
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<version>3.14.1-SNAPSHOT</version>
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<version>3.15.0-SNAPSHOT</version>
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<licenses>
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<license>
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@ -24,6 +24,7 @@ public class ModelConstants {
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public static final String EUROPE_PUBMED_CENTRAL_ID = "10|opendoar____::8b6dd7db9af49e67306feb59a8bdc52c";
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public static final String PUBMED_CENTRAL_ID = "10|opendoar____::eda80a3d5b344bc40f3bc04f65b7a357";
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public static final String ARXIV_ID = "10|opendoar____::6f4922f45568161a8cdf4ad2299f6d23";
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public static final String ROHUB_ID = "10|fairsharing_::1b69ebedb522700034547abc5652ffac";
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public static final String OPENORGS_NAME = "OpenOrgs Database";
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@ -118,7 +119,7 @@ public class ModelConstants {
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public static final String COMPILES = "Compiles";
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public static final String IS_COMPILED_BY = "IsCompiledBy";
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public static final String DESCRIBES = "Describes";
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public static final String IS_DESCRIBE_DBY = "IsDescribedBy";
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public static final String IS_DESCRIBED_BY = "IsDescribedBy";
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public static final String IS_METADATA_FOR = "IsMetadataFor";
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public static final String IS_METADATA_OF = "IsMetadataOf";
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public static final String HAS_ASSOCIATION_WITH = "HasAssociationWith";
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@ -125,7 +125,7 @@ public class ModelSupport {
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set(relationInverseMap, RESULT_RESULT, RELATIONSHIP, IS_RELATED_TO, IS_RELATED_TO);
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set(relationInverseMap, RESULT_RESULT, RELATIONSHIP, IS_COMPILED_BY, COMPILES);
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set(relationInverseMap, RESULT_RESULT, RELATIONSHIP, IS_DESCRIBE_DBY, DESCRIBES);
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set(relationInverseMap, RESULT_RESULT, RELATIONSHIP, IS_DESCRIBED_BY, DESCRIBES);
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set(relationInverseMap, RESULT_RESULT, RELATIONSHIP, IS_METADATA_FOR, IS_METADATA_OF);
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set(relationInverseMap, RESULT_RESULT, RELATIONSHIP, HAS_ASSOCIATION_WITH, HAS_ASSOCIATION_WITH);
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set(relationInverseMap, RESULT_RESULT, RELATIONSHIP, IS_REQUIRED_BY, REQUIRES);
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@ -32,7 +32,8 @@ public class IdentifierFactory implements Serializable {
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public static final int ID_PREFIX_LEN = 12;
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/**
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* Declares the associations PID_TYPE -> [DATASOURCE ID, NAME] considered authoritative for that PID_TYPE
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* Declares the associations PID_TYPE -> [DATASOURCE ID, NAME] considered authoritative for that PID_TYPE.
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* The id of the record (source_::id) will be rewritten as pidType_::id)
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*/
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public static final Map<PidType, HashBiMap<String, String>> PID_AUTHORITY = Maps.newHashMap();
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@ -53,11 +54,17 @@ public class IdentifierFactory implements Serializable {
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PID_AUTHORITY.put(PidType.arXiv, HashBiMap.create());
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PID_AUTHORITY.get(PidType.arXiv).put(ARXIV_ID, "arXiv.org e-Print Archive");
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PID_AUTHORITY.put(PidType.w3id, HashBiMap.create());
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PID_AUTHORITY.get(PidType.w3id).put(ROHUB_ID, "ROHub");
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}
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/**
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* Declares the associations PID_TYPE -> [DATASOURCE ID, PID SUBSTRING] considered as delegated authority for that
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* PID_TYPE. Example, Zenodo is delegated to forge DOIs that contain the 'zenodo' word.
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*
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* If a record with the same id (same pid) comes from 2 data sources, the one coming from a delegated source wins. E.g. Zenodo records win over those from Datacite.
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* See also https://code-repo.d4science.org/D-Net/dnet-hadoop/pulls/187 and the class dhp-common/src/main/java/eu/dnetlib/dhp/schema/oaf/utils/OafMapperUtils.java
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*/
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public static final Map<PidType, Map<String, String>> DELEGATED_PID_AUTHORITY = Maps.newHashMap();
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@ -65,6 +72,8 @@ public class IdentifierFactory implements Serializable {
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DELEGATED_PID_AUTHORITY.put(PidType.doi, new HashMap<>());
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DELEGATED_PID_AUTHORITY.get(PidType.doi).put(ZENODO_OD_ID, "zenodo");
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DELEGATED_PID_AUTHORITY.get(PidType.doi).put(ZENODO_R3_ID, "zenodo");
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DELEGATED_PID_AUTHORITY.put(PidType.w3id, new HashMap<>());
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DELEGATED_PID_AUTHORITY.get(PidType.w3id).put(ROHUB_ID, "ro-id");
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}
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/**
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@ -56,7 +56,7 @@ public enum PidType {
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*
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* Source: https://www.nlm.nih.gov/bsd/mms/medlineelements.html#pmc
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*/
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pmc, handle, arXiv, nct, pdb,
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pmc, handle, arXiv, nct, pdb, w3id,
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// Organization
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openorgs, corda, corda_h2020, GRID, mag_id, urn,
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@ -68,12 +68,18 @@ class IdentifierFactoryTest {
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verifyIdentifier("publication_5.json", defaultID, false);
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}
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@Test
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void testCreateIdentifierForROHub() throws IOException {
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verifyIdentifier(
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"orp-rohub.json", "50|w3id________::afc7592914ae190a50570db90f55f9c2", true);
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}
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protected void verifyIdentifier(String filename, String expectedID, boolean md5) throws IOException {
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final String json = IOUtils.toString(getClass().getResourceAsStream(filename));
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final Publication pub = OBJECT_MAPPER.readValue(json, Publication.class);
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String id = IdentifierFactory.createIdentifier(pub, md5);
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System.out.println(id);
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assertNotNull(id);
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assertEquals(expectedID, id);
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}
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