Merge branch 'master' into person_entity

This commit is contained in:
Claudio Atzori 2024-07-17 11:46:38 +02:00
commit 2dae7d8675
34 changed files with 288 additions and 120 deletions

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@ -4,10 +4,11 @@
| **Version** | **Changes** | **Readiness** |
|-------------|--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|---------------|
| 6.1.1 | [Graph model] </br> <ul><li>Introduced constants used in the DOIBoost dismission.</li></ul> | beta |
| 6.1.0 | [Graph model] </br> <ul><li>Introduced model classes to provide a JSON representation of records embedding information from the related entities.</li></ul> | beta |
| 5.17.3 | [Graph model] </br> <ul><li>added result level textual field to store the transformative agreement information.</li></ul> | beta |
| 4.17.3 | [Graph model] </br> <ul><li>moved context at the level of the entity. </li></ul> | beta |
| 6.1.3 | [Graph model] </br> <ul><li>Updated Solr JSON payload model classes</li></ul> | beta |
| 6.1.1 | [Graph model] </br> <ul><li>Introduced constants used in the DOIBoost dismission.</li></ul> | production |
| 6.1.0 | [Graph model] </br> <ul><li>Introduced model classes to provide a JSON representation of records embedding information from the related entities.</li></ul> | production |
| 5.17.3 | [Graph model] </br> <ul><li>added result level textual field to store the transformative agreement information.</li></ul> | production |
| 4.17.3 | [Graph model] </br> <ul><li>moved context at the level of the entity. </li></ul> | production |
| 4.17.2 | [Graph model] </br> <ul><li>added InstaceTypeMapping field on the instance level.</li><li>new result level fields to support the activities in the Irish tender `isGreen`, `openAccessColor`, `isInDiamondJournal`, `publiclyFunded`</li><ul> | production |
| 3.17.1 | [Graph model] </br> <ul><li>added fulltext field on the instance level.</li><li>added extra organization specific PID types</li><ul> | production |
| 3.16.0 | [Graph model] </br> <ul><li>added entity level measures.</li><ul> | production |

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@ -1,15 +1,13 @@
package eu.dnetlib.dhp.schema.oaf;
import java.util.Objects;
import java.util.Optional;
/**
* This class models the access rights of research products.
*/
public class AccessRight extends Qualifier {
private static final long serialVersionUID = -8945177777173510134L;
private OpenAccessRoute openAccessRoute;
public OpenAccessRoute getOpenAccessRoute() {

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@ -3,7 +3,6 @@ package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.List;
import java.util.Objects;
public class Context implements Serializable {

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@ -2,7 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
public class DataInfo implements Serializable {

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@ -1,12 +1,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
import java.util.Optional;
import java.util.stream.Collectors;
import java.util.stream.Stream;
import org.apache.commons.lang3.StringUtils;
/**
* Describes a reference to the EOSC Interoperability Framework (IF) Guidelines

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@ -3,7 +3,6 @@ package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.List;
import java.util.Objects;
public class ExternalReference implements Serializable {

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@ -2,7 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
public class ExtraInfo implements Serializable {

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@ -2,11 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
import org.apache.commons.lang3.StringUtils;
import com.fasterxml.jackson.annotation.JsonIgnore;
public class GeoLocation implements Serializable {

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@ -2,7 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
/**
* To store information about the classification for the project. The classification depends on the programme. For example

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@ -2,7 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
/**
* To store information about the ec programme for the project. It has the following parameters:

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@ -3,9 +3,6 @@ package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.List;
import java.util.Optional;
import com.google.common.base.Joiner;
public class Instance implements Serializable {

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@ -2,7 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
public class Journal implements Serializable {

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@ -2,13 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
import java.util.Optional;
import org.apache.commons.lang3.StringUtils;
import com.fasterxml.jackson.annotation.JsonIgnore;
import com.google.common.base.Joiner;
public class KeyValue implements Serializable {

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@ -4,8 +4,6 @@ package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.List;
import com.google.common.base.Objects;
/**
* Represent a measure, must be further described by a system available resource providing name and descriptions.
*/

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@ -2,7 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
public class OAIProvenance implements Serializable {

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@ -2,12 +2,7 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Collection;
import java.util.List;
import java.util.Objects;
import java.util.Optional;
import java.util.stream.Collectors;
import java.util.stream.Stream;
public abstract class Oaf implements Serializable {

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@ -3,7 +3,6 @@ package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.*;
import java.util.stream.Collectors;
public abstract class OafEntity extends Oaf implements Serializable {

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@ -2,7 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
public class OriginDescription implements Serializable {

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@ -4,8 +4,6 @@ package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.List;
import org.apache.commons.lang3.StringUtils;
public class Project extends OafEntity implements Serializable {
private static final long serialVersionUID = 5783959097903529424L;

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@ -2,12 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
import java.util.Optional;
import org.apache.commons.lang3.builder.EqualsBuilder;
import com.google.common.base.Joiner;
public class Qualifier implements Serializable {
private static final long serialVersionUID = 6632548656644563076L;

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@ -1,15 +1,10 @@
package eu.dnetlib.dhp.schema.oaf;
import static com.google.common.base.Preconditions.checkArgument;
import java.text.ParseException;
import java.util.ArrayList;
import java.util.List;
import java.util.Objects;
import eu.dnetlib.dhp.schema.common.ModelSupport;
/**
* Relation models any edge between two nodes in the OpenAIRE graph. It has a source id and a target id pointing to
* graph node identifiers and it is further characterised by the semantic of the link through the fields relType,

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@ -2,12 +2,6 @@
package eu.dnetlib.dhp.schema.oaf;
import java.io.Serializable;
import java.util.Objects;
import java.util.Optional;
import java.util.stream.Collectors;
import java.util.stream.Stream;
import org.apache.commons.lang3.StringUtils;
public class StructuredProperty implements Serializable {

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@ -10,23 +10,34 @@ public class AccessRight implements Serializable {
private static final long serialVersionUID = 7995566912611238604L;
private String value;
private String code;
private String label;
private OpenAccessRoute openAccessRoute;
public static AccessRight newInstance(String value, OpenAccessRoute openAccessRoute) {
public static AccessRight newInstance(String code, String label, OpenAccessRoute openAccessRoute) {
AccessRight accessRight = new AccessRight();
accessRight.setValue(value);
accessRight.setCode(code);
accessRight.setLabel(label);
accessRight.setOpenAccessRoute(openAccessRoute);
return accessRight;
}
public String getValue() {
return value;
public String getCode() {
return code;
}
public void setValue(String value) {
this.value = value;
public void setCode(String code) {
this.code = code;
}
public String getLabel() {
return label;
}
public void setLabel(String label) {
this.label = label;
}
public OpenAccessRoute getOpenAccessRoute() {

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@ -0,0 +1,100 @@
package eu.dnetlib.dhp.schema.solr;
import java.io.Serializable;
import java.util.List;
public class ExternalReference implements Serializable {
private static final long serialVersionUID = 781487309068059180L;
// source
private String sitename;
// title
private String label;
// alternative labels
private List<String> alternateLabel;
// text()
private String url;
// type
private CodeLabel qualifier;
// site internal identifier
private String refidentifier;
// maps the oaf:reference/@query attribute
private String query;
public static ExternalReference newInstance(String sitename, String label, List<String> alternateLabel, String url, CodeLabel qualifier, String refidentifier, String query) {
final ExternalReference e = new ExternalReference();
e.setSitename(sitename);
e.setLabel(label);
e.setAlternateLabel(alternateLabel);
e.setUrl(url);
e.setQualifier(qualifier);
e.setRefidentifier(refidentifier);
e.setQuery(query);
return e;
}
public String getSitename() {
return sitename;
}
public void setSitename(String sitename) {
this.sitename = sitename;
}
public String getLabel() {
return label;
}
public void setLabel(String label) {
this.label = label;
}
public List<String> getAlternateLabel() {
return alternateLabel;
}
public void setAlternateLabel(List<String> alternateLabel) {
this.alternateLabel = alternateLabel;
}
public String getUrl() {
return url;
}
public void setUrl(String url) {
this.url = url;
}
public CodeLabel getQualifier() {
return qualifier;
}
public void setQualifier(CodeLabel qualifier) {
this.qualifier = qualifier;
}
public String getRefidentifier() {
return refidentifier;
}
public void setRefidentifier(String refidentifier) {
this.refidentifier = refidentifier;
}
public String getQuery() {
return query;
}
public void setQuery(String query) {
this.query = query;
}
}

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@ -1,10 +0,0 @@
package eu.dnetlib.dhp.schema.solr;
import java.io.Serializable;
public class ExtraInfo implements Serializable {
private static final long serialVersionUID = -6627854860189757709L;
//TODO define me!
}

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@ -1,10 +1,36 @@
package eu.dnetlib.dhp.schema.solr;
import java.io.Serializable;
import java.util.List;
public class Measure implements Serializable {
private static final long serialVersionUID = 57939927121851504L;
//TODO define me!
private String id;
private List<CodeLabel> unit;
public static Measure newInstance(String id, List<CodeLabel> unit) {
Measure m = new Measure();
m.setId(id);
m.setUnit(unit);
return m;
}
public String getId() {
return id;
}
public void setId(String id) {
this.id = id;
}
public List<CodeLabel> getUnit() {
return unit;
}
public void setUnit(List<CodeLabel> unit) {
this.unit = unit;
}
}

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@ -6,25 +6,20 @@ public class Pid implements Serializable {
private static final long serialVersionUID = -943684282582228545L;
private String type;
private String value;
public static Pid newInstance(String type, String value) {
private String typeCode;
private String typeLabel;
public static Pid newInstance(String value, String typeCode, String typeLabel) {
Pid p = new Pid();
p.setType(type);
p.setValue(value);
p.setTypeCode(typeCode);
p.setTypeLabel(typeLabel);
return p;
}
public String getType() {
return type;
}
public void setType(String type) {
this.type = type;
}
public String getValue() {
return value;
}
@ -32,4 +27,20 @@ public class Pid implements Serializable {
public void setValue(String value) {
this.value = value;
}
public String getTypeCode() {
return typeCode;
}
public void setTypeCode(String typeCode) {
this.typeCode = typeCode;
}
public String getTypeLabel() {
return typeLabel;
}
public void setTypeLabel(String typeLabel) {
this.typeLabel = typeLabel;
}
}

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@ -39,6 +39,7 @@ public class RelatedRecord implements Serializable {
private String acronym;
private CodeLabel contracttype;
private Funding funding;
private String validationDate;
public RelatedRecordHeader getHeader() {
return header;
@ -215,4 +216,12 @@ public class RelatedRecord implements Serializable {
public void setFunding(Funding funding) {
this.funding = funding;
}
public String getValidationDate() {
return validationDate;
}
public void setValidationDate(String validationDate) {
this.validationDate = validationDate;
}
}

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@ -14,12 +14,18 @@ public class RelatedRecordHeader implements Serializable {
private RecordType relatedRecordType;
public static RelatedRecordHeader newInstance(String relationType, String relationClass, String relatedIdentifier, RecordType relatedRecordType) {
private String relationProvenance;
private String trust;
public static RelatedRecordHeader newInstance(String relationType, String relationClass, String relatedIdentifier, RecordType relatedRecordType, String relationProvenance, String trust) {
RelatedRecordHeader header = new RelatedRecordHeader();
header.setRelationType(relationType);
header.setRelationClass(relationClass);
header.setRelatedIdentifier(relatedIdentifier);
header.setRelatedRecordType(relatedRecordType);
header.setRelationProvenance(relationProvenance);
header.setTrust(trust);
return header;
}
@ -54,4 +60,20 @@ public class RelatedRecordHeader implements Serializable {
public void setRelatedRecordType(RecordType relatedRecordType) {
this.relatedRecordType = relatedRecordType;
}
public String getRelationProvenance() {
return relationProvenance;
}
public void setRelationProvenance(String relationProvenance) {
this.relationProvenance = relationProvenance;
}
public String getTrust() {
return trust;
}
public void setTrust(String trust) {
this.trust = trust;
}
}

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@ -3,8 +3,6 @@ package eu.dnetlib.dhp.schema.solr;
import java.io.Serializable;
import java.util.List;
import com.fasterxml.jackson.annotation.JsonProperty;
public class Result implements Serializable {
private static final long serialVersionUID = -9121038426985022737L;
@ -147,18 +145,18 @@ public class Result implements Serializable {
*/
private List<EoscIfGuidelines> eoscifguidelines;
@JsonProperty("isGreen")
private Boolean isGreen;
private OpenAccessColor openAccessColor;
@JsonProperty("isInDiamondJournal")
private Boolean isInDiamondJournal;
private Boolean publiclyFunded;
private String transformativeAgreement;
private List<ExternalReference> externalReference;
/**
* Each instance is one specific materialisation or version of the result. For example, you can have one result with
* three instance: one is the pre-print, one is the post-print, one is te published version
@ -381,11 +379,11 @@ public class Result implements Serializable {
this.eoscifguidelines = eoscifguidelines;
}
public Boolean getGreen() {
public Boolean getIsGreen() {
return isGreen;
}
public void setGreen(Boolean green) {
public void setIsGreen(Boolean green) {
isGreen = green;
}
@ -397,11 +395,11 @@ public class Result implements Serializable {
this.openAccessColor = openAccessColor;
}
public Boolean getInDiamondJournal() {
public Boolean getIsInDiamondJournal() {
return isInDiamondJournal;
}
public void setInDiamondJournal(Boolean inDiamondJournal) {
public void setIsInDiamondJournal(Boolean inDiamondJournal) {
isInDiamondJournal = inDiamondJournal;
}
@ -421,6 +419,14 @@ public class Result implements Serializable {
this.transformativeAgreement = transformativeAgreement;
}
public List<ExternalReference> getExternalReference() {
return externalReference;
}
public void setExternalReference(List<ExternalReference> externalReference) {
this.externalReference = externalReference;
}
public List<Instance> getInstance() {
return instance;
}

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@ -20,8 +20,6 @@ public class SolrRecord implements Serializable {
private List<Measure> measures;
private List<ExtraInfo> extraInfo;
private Result result;
private Datasource datasource;
@ -74,14 +72,6 @@ public class SolrRecord implements Serializable {
this.measures = measures;
}
public List<ExtraInfo> getExtraInfo() {
return extraInfo;
}
public void setExtraInfo(List<ExtraInfo> extraInfo) {
this.extraInfo = extraInfo;
}
public Result getResult() {
return result;
}

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@ -7,6 +7,8 @@ public class SolrRecordHeader implements Serializable {
private static final long serialVersionUID = -6052397109220149426L;
public enum Status { UNDER_CURATION }
/**
* The OpenAIRE identifiers for this record
*/
@ -19,13 +21,20 @@ public class SolrRecordHeader implements Serializable {
private RecordType recordType;
private Status status = null;
private Boolean deletedbyinference;
public static SolrRecordHeader newInstance(String id, List<String> originalId, RecordType recordType, Boolean deletedbyinference) {
return newInstance(id, originalId, recordType, null, deletedbyinference);
}
public static SolrRecordHeader newInstance(String id, List<String> originalId, RecordType recordType, Status status, Boolean deletedbyinference) {
SolrRecordHeader header = new SolrRecordHeader();
header.setId(id);
header.setOriginalId(originalId);
header.setRecordType(recordType);
header.setStatus(status);
header.setDeletedbyinference(deletedbyinference);
return header;
}
@ -58,6 +67,14 @@ public class SolrRecordHeader implements Serializable {
return deletedbyinference;
}
public Status getStatus() {
return status;
}
public void setStatus(Status status) {
this.status = status;
}
public void setDeletedbyinference(Boolean deletedbyinference) {
this.deletedbyinference = deletedbyinference;
}

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@ -8,12 +8,15 @@ public class Subject implements Serializable {
private String value;
private String type;
private String typeCode;
public static Subject newInstance(String value, String type) {
private String typeLabel;
public static Subject newInstance(String value, String typeCode, String typeLabel) {
Subject s = new Subject();
s.setValue(value);
s.setType(type);
s.setTypeCode(typeCode);
s.setTypeLabel(typeLabel);
return s;
}
@ -25,11 +28,19 @@ public class Subject implements Serializable {
this.value = value;
}
public String getType() {
return type;
public String getTypeCode() {
return typeCode;
}
public void setType(String type) {
this.type = type;
public void setTypeCode(String typeCode) {
this.typeCode = typeCode;
}
public String getTypeLabel() {
return typeLabel;
}
public void setTypeLabel(String typeLabel) {
this.typeLabel = typeLabel;
}
}

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@ -0,0 +1,33 @@
package eu.dnetlib.dhp.schema.solr;
import static org.junit.jupiter.api.Assertions.*;
import java.io.IOException;
import org.junit.jupiter.api.Test;
import com.fasterxml.jackson.databind.ObjectMapper;
public class TestJsonSerialization {
private static ObjectMapper MAPPER = new ObjectMapper();
@Test
void testSerialiseJsonPayload() throws IOException {
Result r = new Result();
r.setIsGreen(true);
r.setIsInDiamondJournal(false);
final String json = MAPPER.writeValueAsString(r);
assertNotNull(json);
System.out.println("json = " + json);
Result r1 = MAPPER.readValue(json, Result.class);
assertTrue(r1.getIsGreen());
assertFalse(r1.getIsInDiamondJournal());
}
}