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7.9 KiB
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1 line
7.9 KiB
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{"collectedfrom":[{"key":"10|opendoar____::358aee4cc897452c00244351e4d91f69","value":"ZENODO","dataInfo":null}],"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"0.9","inferenceprovenance":null,"provenanceaction":{"classid":"sysimport:crosswalk:repository","classname":"sysimport:crosswalk:repository","schemeid":"dnet:provenanceActions","schemename":"dnet:provenanceActions"}},"lastupdatetimestamp":1669386782200,"id":"50|od______2659::040cee965a4544e343a2ba149783c3fc","originalId":["oai:zenodo.org:7351221","50|od______2659::040cee965a4544e343a2ba149783c3fc"],"pid":[{"value":"10.5281/zenodo.7351221","qualifier":{"classid":"doi","classname":"doi","schemeid":"dnet:pid_types","schemename":"dnet:pid_types"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"0.9","inferenceprovenance":null,"provenanceaction":{"classid":"sysimport:crosswalk:repository","classname":"sysimport:crosswalk:repository","schemeid":"dnet:provenanceActions","schemename":"dnet:provenanceActions"}}}],"dateofcollection":"2022-11-25T01:08:31Z","dateoftransformation":"","extraInfo":[],"oaiprovenance":null,"processingchargeamount":null,"processingchargecurrency":null,"measures":null,"author":[{"fullname":"Karki, Reagon","name":"Reagon","surname":"Karki","rank":1,"pid":[{"value":"0000-0002-1815-0037","qualifier":{"classid":"orcid_pending","classname":"Open Researcher and Contributor ID","schemeid":"dnet:pid_types","schemename":"dnet:pid_types"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"0.9","inferenceprovenance":null,"provenanceaction":{"classid":"sysimport:crosswalk:repository","classname":"sysimport:crosswalk:repository","schemeid":"dnet:provenanceActions","schemename":"dnet:provenanceActions"}}}],"affiliation":[{"value":"Fraunhofer Institute of Translation Medicine and Pharmacology","dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"0.9","inferenceprovenance":null,"provenanceaction":{"classid":"sysimport:crosswalk:repository","classname":"sysimport:crosswalk:repository","schemeid":"dnet:provenanceActions","schemename":"dnet:provenanceActions"}}}]}],"resulttype":{"classid":"software","classname":"software","schemeid":"dnet:result_typologies","schemename":"dnet:result_typologies"},"language":{"classid":"UNKNOWN","classname":"Unknown","schemeid":"dnet:languages","schemename":"dnet:languages"},"country":[],"subject":[],"title":[{"value":"COVID-19 Knowledge Graph: A semantic resource embedding biological and chemical entities","qualifier":{"classid":"main title","classname":"main title","schemeid":"dnet:dataCite_title","schemename":"dnet:dataCite_title"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"0.9","inferenceprovenance":null,"provenanceaction":{"classid":"sysimport:crosswalk:repository","classname":"sysimport:crosswalk:repository","schemeid":"dnet:provenanceActions","schemename":"dnet:provenanceActions"}}}],"relevantdate":[{"value":"2022-11-23","qualifier":{"classid":"Issued","classname":"Issued","schemeid":"dnet:dataCite_date","schemename":"dnet:dataCite_date"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"0.9","inferenceprovenance":null,"provenanceaction":{"classid":"sysimport:crosswalk:repository","classname":"sysimport:crosswalk:repository","schemeid":"dnet:provenanceActions","schemename":"dnet:provenanceActions"}}}],"description":[{"value":"<p>A Knowledge graph representation of compounds and associated biological entities in the BY-COVID and EOSC Future project.</p>\n\n <p><strong>Current status</strong></p>\n\n <ul>\n <li>Number of Nodes: 35952</li>\n <li>Number of Edges: 279462</li>\n <li>Human Proteins: 1347</li>\n <li>Assay: 15835</li>\n <li>Chemical/Compound: 4096</li>\n <li>Mechanism of Action: 739</li>\n <li>Pathway: 1513</li>\n <li>Disease: 1585</li>\n <li>SideEffect: 7420</li>\n <li>Biological Process: 2085</li>\n <li>Molecular Function: 1332</li>\n </ul>\n\n <p>Please check the BY_COVID_update_August.ipynb for understanding step wise process of KG generation and KG statistics. The KG has been exported to formats such as graphml, sif and so on for visualizations in other platforms. For example, the graphml file can be imported to Cytoscape directly. 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