From 30d3ae6b69e0b28dd33a2db77233857b296bb181 Mon Sep 17 00:00:00 2001 From: Miriam Baglioni Date: Fri, 19 Jul 2024 16:22:28 +0200 Subject: [PATCH] [DUMP] fix some inconsistencies --- .../dhp/oa/graph/dump/ResultMapper.java | 4 +- .../eu/dnetlib/dhp/oa/graph/dump/Utils.java | 33 +++----------- .../dhp/oa/graph/dump/complete/Extractor.java | 2 + .../dump/complete/SparkDumpEntitiesJob.java | 43 ++++++++----------- .../dhp/oa/graph/dump/DumpJobTest.java | 21 +++------ .../complete/organization/organization.json | 3 +- pom.xml | 2 +- 7 files changed, 38 insertions(+), 70 deletions(-) diff --git a/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/ResultMapper.java b/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/ResultMapper.java index 6ae9cbf..6dd997c 100644 --- a/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/ResultMapper.java +++ b/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/ResultMapper.java @@ -432,8 +432,8 @@ public class ResultMapper implements Serializable { if (journal.isPresent()) { Journal j = journal.get(); Container c = new Container(); - c.setConferencedate(j.getConferencedate()); - c.setConferenceplace(j.getConferenceplace()); + c.setConferenceDate(j.getConferencedate()); + c.setConferencePlace(j.getConferenceplace()); c.setEdition(j.getEdition()); c.setEp(j.getEp()); c.setIss(j.getIss()); diff --git a/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/Utils.java b/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/Utils.java index ac1c793..fcd3b20 100644 --- a/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/Utils.java +++ b/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/Utils.java @@ -152,15 +152,6 @@ public class Utils { } /** - * "measures":[{"id":"influence", - * "unit":[{"key":"score","value":"3.1177596E-9"},{"key":"class","value":"C5"}]}, - * {"id":"popularity", - * "unit":[{"key":"score","value":"1.6041533E-9"},{ - * "key":"class","value":"C5"}]}, - * {"id":"influence_alt", - *{"key":"score","value":"0"},{"key":"class","value":"C5"}]}, - * {"id":"popularity_alt","unit":[{"key":"score","value":"0.0"},{,"key":"class","value":"C5"}]},{"id":"impulse", - * {key":"score","value":"0"},,"key":"class","value":"C5"}]}] * @param measures * @return */ @@ -169,10 +160,10 @@ public class Utils { for (eu.dnetlib.dhp.schema.oaf.Measure m : measures) { switch (m.getId()) { case USAGE_COUNT_DOWNLOADS: - getUsageCounts(i).setDownloads(m.getUnit().get(0).getValue()); + getUsageCounts(i).setDownloads(Integer.parseInt(m.getUnit().get(0).getValue())); break; case USAGE_COUNT_VIEWS: - getUsageCounts(i).setViews(m.getUnit().get(0).getValue()); + getUsageCounts(i).setViews(Integer.parseInt(m.getUnit().get(0).getValue())); break; case BIP_INFLUENCE: m.getUnit().forEach(u -> { @@ -192,10 +183,10 @@ public class Utils { break; case BIP_INFLUENCE_ALT: m.getUnit().forEach(u -> { - if (u.getKey().equals("class")) - getImpactMeasure(i).setCitationClass(u.getValue()); - if (u.getKey().equals("score")) - getImpactMeasure(i).setCitationCount(Integer.parseInt(u.getValue())); + if (u.getKey().equals("class")) + getImpactMeasure(i).setCitationClass(u.getValue()); + if (u.getKey().equals("score")) + getImpactMeasure(i).setCitationCount(Double.parseDouble(u.getValue())); }); break; case BIP_POPULARITY_ALT: @@ -233,16 +224,4 @@ public class Utils { return i.getCitationImpact(); } - private static Score getScore(String indicator, List unit) { - Score s = new Score(); - s.setIndicator(indicator); - for (KeyValue u : unit) { - if (u.getKey().equals("score")) { - s.setScore(u.getValue()); - } else { - s.setClazz(u.getValue()); - } - } - return s; - } } diff --git a/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/complete/Extractor.java b/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/complete/Extractor.java index 1fb24c4..bdc47e5 100644 --- a/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/complete/Extractor.java +++ b/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/complete/Extractor.java @@ -164,6 +164,8 @@ public class Extractor implements Serializable { .newInstance( eu.dnetlib.dhp.oa.graph.dump.Constants.HARVESTED, eu.dnetlib.dhp.oa.graph.dump.Constants.DEFAULT_TRUST)); + if (cf.getKey().equals("10|openaire____:8ac8380272269217cb09a928c8caa993")) + cf.setKey("10|openaire____::8ac8380272269217cb09a928c8caa993"); Relation r = getRelation( getEntityId(value.getId(), ENTITY_ID_SEPARATOR), getEntityId(cf.getKey(), ENTITY_ID_SEPARATOR), Constants.RESULT_ENTITY, Constants.DATASOURCE_ENTITY, diff --git a/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/complete/SparkDumpEntitiesJob.java b/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/complete/SparkDumpEntitiesJob.java index 7644a07..bf462d3 100644 --- a/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/complete/SparkDumpEntitiesJob.java +++ b/dump/src/main/java/eu/dnetlib/dhp/oa/graph/dump/complete/SparkDumpEntitiesJob.java @@ -239,7 +239,7 @@ public class SparkDumpEntitiesJob implements Serializable { .ofNullable(d.getDatasourcetype()) .ifPresent( dsType -> datasource - .setDatasourceType(DatasourceSchemeValue.newInstance(dsType.getClassid(), dsType.getClassname()))); + .setType(DatasourceSchemeValue.newInstance(dsType.getClassid(), dsType.getClassname()))); Optional .ofNullable(d.getOpenairecompatibility()) @@ -247,23 +247,23 @@ public class SparkDumpEntitiesJob implements Serializable { Optional .ofNullable(d.getOfficialname()) - .ifPresent(oname -> datasource.setOfficialname(oname.getValue())); + .ifPresent(oname -> datasource.setOfficialName(oname.getValue())); Optional .ofNullable(d.getEnglishname()) - .ifPresent(ename -> datasource.setEnglishname(ename.getValue())); + .ifPresent(ename -> datasource.setEnglishName(ename.getValue())); Optional .ofNullable(d.getWebsiteurl()) - .ifPresent(wsite -> datasource.setWebsiteurl(wsite.getValue())); + .ifPresent(wsite -> datasource.setWebsiteUrl(wsite.getValue())); Optional .ofNullable(d.getLogourl()) - .ifPresent(lurl -> datasource.setLogourl(lurl.getValue())); + .ifPresent(lurl -> datasource.setLogoUrl(lurl.getValue())); Optional .ofNullable(d.getDateofvalidation()) - .ifPresent(dval -> datasource.setDateofvalidation(dval.getValue())); + .ifPresent(dval -> datasource.setDateOfValidation(dval.getValue())); Optional .ofNullable(d.getDescription()) @@ -288,35 +288,35 @@ public class SparkDumpEntitiesJob implements Serializable { .ofNullable(d.getOdcontenttypes()) .ifPresent( ctypes -> datasource - .setContenttypes(ctypes.stream().map(ctype -> ctype.getValue()).collect(Collectors.toList()))); + .setContentTypes(ctypes.stream().map(ctype -> ctype.getValue()).collect(Collectors.toList()))); Optional .ofNullable(d.getReleasestartdate()) - .ifPresent(rd -> datasource.setReleasestartdate(rd.getValue())); + .ifPresent(rd -> datasource.setReleaseStartDate(rd.getValue())); Optional .ofNullable(d.getReleaseenddate()) - .ifPresent(ed -> datasource.setReleaseenddate(ed.getValue())); + .ifPresent(ed -> datasource.setReleaseEndDate(ed.getValue())); Optional .ofNullable(d.getMissionstatementurl()) - .ifPresent(ms -> datasource.setMissionstatementurl(ms.getValue())); + .ifPresent(ms -> datasource.setMissionStatementUrl(ms.getValue())); Optional .ofNullable(d.getDatabaseaccesstype()) - .ifPresent(ar -> datasource.setAccessrights(ar.getValue())); + .ifPresent(ar -> datasource.setAccessRights(ar.getValue())); Optional .ofNullable(d.getDatauploadtype()) - .ifPresent(dut -> datasource.setUploadrights(dut.getValue())); + .ifPresent(dut -> datasource.setUploadRights(dut.getValue())); Optional .ofNullable(d.getDatabaseaccessrestriction()) - .ifPresent(dar -> datasource.setDatabaseaccessrestriction(dar.getValue())); + .ifPresent(dar -> datasource.setDatabaseAccessRestriction(dar.getValue())); Optional .ofNullable(d.getDatauploadrestriction()) - .ifPresent(dur -> datasource.setDatauploadrestriction(dur.getValue())); + .ifPresent(dur -> datasource.setDataUploadRestriction(dur.getValue())); Optional .ofNullable(d.getVersioning()) @@ -324,11 +324,11 @@ public class SparkDumpEntitiesJob implements Serializable { Optional .ofNullable(d.getCitationguidelineurl()) - .ifPresent(cu -> datasource.setCitationguidelineurl(cu.getValue())); + .ifPresent(cu -> datasource.setCitationGuidelineUrl(cu.getValue())); Optional .ofNullable(d.getPidsystems()) - .ifPresent(ps -> datasource.setPidsystems(ps.getValue())); + .ifPresent(ps -> datasource.setPidSystems(ps.getValue())); Optional .ofNullable(d.getCertificates()) @@ -342,10 +342,6 @@ public class SparkDumpEntitiesJob implements Serializable { .ofNullable(d.getJournal()) .ifPresent(j -> datasource.setJournal(getContainer(j))); -// Optional -// .ofNullable(d.getMeasures()) -// .ifPresent(m -> datasource.setIndicators(Utils.getIndicator(d.getMeasures()))); - return datasource; } @@ -391,11 +387,11 @@ public class SparkDumpEntitiesJob implements Serializable { Optional .ofNullable(j.getConferencedate()) - .ifPresent(cdate -> c.setConferencedate(cdate)); + .ifPresent(cdate -> c.setConferenceDate(cdate)); Optional .ofNullable(j.getConferenceplace()) - .ifPresent(cplace -> c.setConferenceplace(cplace)); + .ifPresent(cplace -> c.setConferencePlace(cplace)); return c; } @@ -514,9 +510,6 @@ public class SparkDumpEntitiesJob implements Serializable { } project.setFunding(funList); -// if (Optional.ofNullable(p.getMeasures()).isPresent()) { -// project.setIndicators(Utils.getIndicator(p.getMeasures())); -// } return project; } diff --git a/dump/src/test/java/eu/dnetlib/dhp/oa/graph/dump/DumpJobTest.java b/dump/src/test/java/eu/dnetlib/dhp/oa/graph/dump/DumpJobTest.java index 4091c2b..3e30304 100644 --- a/dump/src/test/java/eu/dnetlib/dhp/oa/graph/dump/DumpJobTest.java +++ b/dump/src/test/java/eu/dnetlib/dhp/oa/graph/dump/DumpJobTest.java @@ -376,27 +376,20 @@ public class DumpJobTest { .assertTrue(Integer.valueOf(gr.getIndicators().getUsageCounts().getViews()) >= 0); BipIndicators bip = gr.getIndicators().getCitationImpact(); - Assertions.assertEquals("6.01504990349e-09", bip.getInfluence()); + Assertions.assertEquals(6.01504990349E-9, bip.getInfluence()); Assertions.assertEquals("C", bip.getInfluenceClass()); -// -// case "popularity_alt": -// Assertions.assertEquals("2.304", in.getScore()); -// Assertions.assertEquals("C", in.getClazz()); -// break; - Assertions.assertEquals("1.81666032463e-08", bip.getPopularity()); + Assertions.assertEquals(1.81666032463E-8, bip.getPopularity()); Assertions.assertEquals("C", bip.getPopularityClass()); -// case "influence_alt": -// Assertions.assertEquals("8.0", in.getScore()); -// Assertions.assertEquals("C", in.getClazz()); -// break; + Assertions.assertEquals(8.0, bip.getCitationCount()); + Assertions.assertEquals("C", bip.getCitationClass()); - Assertions.assertEquals("8.0", bip.getImpulse()); + Assertions.assertEquals(8.0, bip.getImpulse()); Assertions.assertEquals("C", bip.getImpulseClass()); - Assertions.assertEquals("0", gr.getIndicators().getUsageCounts().getDownloads()); - Assertions.assertEquals("1", gr.getIndicators().getUsageCounts().getViews()); + Assertions.assertEquals(0, gr.getIndicators().getUsageCounts().getDownloads()); + Assertions.assertEquals(1, gr.getIndicators().getUsageCounts().getViews()); Assertions.assertEquals(1, gr.getInstance().size()); diff --git a/dump/src/test/resources/eu/dnetlib/dhp/oa/graph/dump/complete/organization/organization.json b/dump/src/test/resources/eu/dnetlib/dhp/oa/graph/dump/complete/organization/organization.json index e141af7..c79b276 100644 --- a/dump/src/test/resources/eu/dnetlib/dhp/oa/graph/dump/complete/organization/organization.json +++ b/dump/src/test/resources/eu/dnetlib/dhp/oa/graph/dump/complete/organization/organization.json @@ -31,4 +31,5 @@ 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