bioentities-preprocess/main.py

15 lines
434 B
Python

from pdb.pdb_download import PDBDownloader
from pdb.pdb_metadata_extractor import MetadataExctractor
from pdb.pdb_validator import validate
if __name__ == '__main__':
p = PDBDownloader()
p.get_file_to_downloads(max_item=4)
m = MetadataExctractor()
m.extract_metadata()
error, valid, total, error_record = validate()
print(error)
print(f"Valid {valid}/{total}")
print(f"Error {error_record}/{total}")