From 1f20d0ee07eee4360361da3f04de2cfaa84eece8 Mon Sep 17 00:00:00 2001 From: Sandro La Bruzzo Date: Fri, 22 Sep 2023 14:24:03 +0200 Subject: [PATCH] defined main class --- main.py | 24 ++++++++++++------------ 1 file changed, 12 insertions(+), 12 deletions(-) diff --git a/main.py b/main.py index 3cb8629..fcc65e7 100644 --- a/main.py +++ b/main.py @@ -6,24 +6,24 @@ from uniprot.metadata import MetadataExctractor as ME from uniprot.uniprot_validator import validate as validate_uniprot if __name__ == '__main__': + print("UNIPROT -PREPROCESSING") u = UniprotSwissDownloader() - #u.download() + u.download() k = ME() + k.extract_metadata() error, valid, total, error_record = validate_uniprot() print(error) print(f"Valid {valid}/{total}") print(f"Error {error_record}/{total}") - # k.extract_metadata() - - - # p = PDBDownloader() - # p.get_file_to_downloads(max_item=4) - # m = MetadataExctractor() - # m.extract_metadata() - # error, valid, total, error_record = validate() - # print(error) - # print(f"Valid {valid}/{total}") - # print(f"Error {error_record}/{total}") + print("PDB -PREPROCESSING") + p = PDBDownloader() + p.get_file_to_downloads(max_item=4) + m = MetadataExctractor() + m.extract_metadata() + error, valid, total, error_record = validate() + print(error) + print(f"Valid {valid}/{total}") + print(f"Error {error_record}/{total}")