From 8a9782cb1efd1b8e6c59c5ff86f9deeec83e1663 Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Mon, 14 Dec 2020 17:49:53 +0100 Subject: [PATCH 01/10] re-organising workflows and templates for staging/public instances of graphdb and elasticsearch --- .../workflows/repo-hi/NEW_publish_wf.xml.st | 79 ------- .../repo-hi/full_aggregation_wf.xml.st | 198 ++++++++++++++++++ .../{ => old}/enrich_graphdb_wf.xml.st | 0 .../repo-hi/{ => old}/index_on_es_wf.xml.st | 0 .../{ => old}/x3m_aggregation_wf.xml.st | 0 .../{ => old}/repo_hi_enrich_graphdb.xml | 0 .../{ => old}/repo_hi_index_on_es.xml | 0 .../publish/virtuoso_publish_template.xml | 41 ---- .../repo_hi_import_periodo_into_graphdb.xml | 0 .../repo_hi_main.xml} | 6 +- .../profiles/workflows/repo_bye_template.xml | 1 + .../{ => templates}/collection_template.xml | 0 .../enrich_graphdb_template.xml | 0 .../{ => templates}/graphdb_template.xml | 2 +- .../import_periodo_into_graphdb_template.xml | 0 .../{ => templates}/index_on_es_template.xml | 2 +- .../{ => templates}/index_template.xml | 0 .../templates/public_publishing_template.xml | 75 +++++++ .../transform_x3m_template.xml | 0 19 files changed, 279 insertions(+), 125 deletions(-) delete mode 100644 dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/NEW_publish_wf.xml.st create mode 100644 dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st rename dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/{ => old}/enrich_graphdb_wf.xml.st (100%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/{ => old}/index_on_es_wf.xml.st (100%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/{ => old}/x3m_aggregation_wf.xml.st (100%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => old}/repo_hi_enrich_graphdb.xml (100%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => old}/repo_hi_index_on_es.xml (100%) delete mode 100644 dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/publish/virtuoso_publish_template.xml rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => repo-hi}/repo_hi_import_periodo_into_graphdb.xml (100%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{NEW_repo_hi_x3m.xml => repo-hi/repo_hi_main.xml} (94%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => templates}/collection_template.xml (100%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => templates}/enrich_graphdb_template.xml (100%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => templates}/graphdb_template.xml (91%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => templates}/import_periodo_into_graphdb_template.xml (100%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => templates}/index_on_es_template.xml (92%) rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => templates}/index_template.xml (100%) create mode 100644 dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml rename dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/{ => templates}/transform_x3m_template.xml (100%) diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/NEW_publish_wf.xml.st b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/NEW_publish_wf.xml.st deleted file mode 100644 index 2747394..0000000 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/NEW_publish_wf.xml.st +++ /dev/null @@ -1,79 +0,0 @@ - - -
- - - - - -
- - $name$ - $desc$ - - publishing - $priority$ - - - - - - - public - REFRESH - http://localhost:8080/ariadneplus/publish - - - - Store RDF files in Virtuoso - - - - - - - - - - - - - - - - - - - - - - - - - - 9 9 9 ? * * - 10080 - - - -
diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st new file mode 100644 index 0000000..dcb4d41 --- /dev/null +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st @@ -0,0 +1,198 @@ + + +
+ + + + + +
+ + $name$ + $desc$ + + aggregator + $priority$ + + + + + INCREMENTAL + + + false + REFRESH + + + + + + + + + transformed + REFRESH + + https://aggregator.ariadne.d4science.org/ariadneplus-graphdb + https://aggregator.ariadne.d4science.org/ariadneplus-graphdb-public + + + + + Collect metadata + + + + + + + + + + + + + + + + + + + Transform records + + + + + + + + + + + + + + + + + + + + + + + + + + Index record + + + + + + + + + + + + + + + + + + + Publish records to the Staging GraphDB + + + + + + + + + + + + + + + + + + Enrich GraphDB with sparql update query + + + + + + + + + + + + + + + + + + Index on Staging Elasticsearch all records of an API from GraphDB + + + + + + + + + + + + + + + + + Publish records to the public GraphDB and Elasticsearch + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 9 9 9 ? * * + 10080 + + + +
diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/enrich_graphdb_wf.xml.st b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/old/enrich_graphdb_wf.xml.st similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/enrich_graphdb_wf.xml.st rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/old/enrich_graphdb_wf.xml.st diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/index_on_es_wf.xml.st b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/old/index_on_es_wf.xml.st similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/index_on_es_wf.xml.st rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/old/index_on_es_wf.xml.st diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/x3m_aggregation_wf.xml.st b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/old/x3m_aggregation_wf.xml.st similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/x3m_aggregation_wf.xml.st rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/old/x3m_aggregation_wf.xml.st diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_hi_enrich_graphdb.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/old/repo_hi_enrich_graphdb.xml similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_hi_enrich_graphdb.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/old/repo_hi_enrich_graphdb.xml diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_hi_index_on_es.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/old/repo_hi_index_on_es.xml similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_hi_index_on_es.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/old/repo_hi_index_on_es.xml diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/publish/virtuoso_publish_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/publish/virtuoso_publish_template.xml deleted file mode 100644 index ab67154..0000000 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/publish/virtuoso_publish_template.xml +++ /dev/null @@ -1,41 +0,0 @@ - - -
- - - - - -
- - - - - - - - - Fetch records from MDStore - - - - - - - - - - - Feed records into Virtuoso - - - - - - - - - - - -
diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_hi_import_periodo_into_graphdb.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_import_periodo_into_graphdb.xml similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_hi_import_periodo_into_graphdb.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_import_periodo_into_graphdb.xml diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/NEW_repo_hi_x3m.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_main.xml similarity index 94% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/NEW_repo_hi_x3m.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_main.xml index 5bc901b..ad49b61 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/NEW_repo_hi_x3m.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_main.xml @@ -40,9 +40,9 @@ Create Workflow - - - + + + diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_bye_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_bye_template.xml index 391160f..4a3d493 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_bye_template.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo_bye_template.xml @@ -18,6 +18,7 @@ + Delete the mdstore of collected records diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/collection_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/collection_template.xml similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/collection_template.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/collection_template.xml diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/enrich_graphdb_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/enrich_graphdb_template.xml similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/enrich_graphdb_template.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/enrich_graphdb_template.xml diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/graphdb_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/graphdb_template.xml similarity index 91% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/graphdb_template.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/graphdb_template.xml index 1f1e054..4e2b2a8 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/graphdb_template.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/graphdb_template.xml @@ -13,7 +13,7 @@ - http://localhost:8080/ariadneplus/publish + diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/import_periodo_into_graphdb_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/import_periodo_into_graphdb_template.xml similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/import_periodo_into_graphdb_template.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/import_periodo_into_graphdb_template.xml diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/index_on_es_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/index_on_es_template.xml similarity index 92% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/index_on_es_template.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/index_on_es_template.xml index ef24ed1..e8af7a4 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/index_on_es_template.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/index_on_es_template.xml @@ -12,7 +12,7 @@ - http://localhost:8281/ariadneplus-graphdb + diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/index_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/index_template.xml similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/index_template.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/index_template.xml diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml new file mode 100644 index 0000000..7f28a05 --- /dev/null +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml @@ -0,0 +1,75 @@ + +
+ + + + + +
+ + + + + + + + + + + + Publish records to the public GraphDB + + + + + + + + + + + + + + + + + + Enrich public GraphDB with sparql update query + + + + + + + + + + + + + + + + + + Index on public Elasticsearch all records of an API from GraphDB + + + + + + + + + + + + + + + + + + +
\ No newline at end of file diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/transform_x3m_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/transform_x3m_template.xml similarity index 100% rename from dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/transform_x3m_template.xml rename to dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/transform_x3m_template.xml From be64ce5dcf165b2d6107152726ebf37bfa6ececf Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Mon, 14 Dec 2020 18:22:13 +0100 Subject: [PATCH 02/10] changed workflow name ad description --- .../bootstrap/profiles/workflows/repo-hi/repo_hi_main.xml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_main.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_main.xml index ad49b61..c903e38 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_main.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/repo-hi/repo_hi_main.xml @@ -8,8 +8,8 @@ - Aggregate Metadata (X3M) - Collect, transform with X3M, and export metadata + Aggregate and Publish Metadata + Aggregate, enrich and publish metadata Aggregate Metadata Content Provider From 687d5ab9ecc58e8db9d6ef0d54c30e4c55b49987 Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Mon, 14 Dec 2020 18:27:23 +0100 Subject: [PATCH 03/10] only one start node --- .../ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st index dcb4d41..b409e64 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st @@ -120,7 +120,7 @@
- + Enrich GraphDB with sparql update query @@ -138,7 +138,7 @@ - + Index on Staging Elasticsearch all records of an API from GraphDB From 4edfc4af05add838e564c2567aabecca23615c21 Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Mon, 14 Dec 2020 18:56:49 +0100 Subject: [PATCH 04/10] new_agg_wf.xml annotated with comments to guide the (manual) migration of old workflows to the new one --- .../eu/dnetlib/wf_migration/new_agg_wf.xml | 195 ++++++++++++++++++ .../eu/dnetlib/wf_migration/old_agg_wf.xml | 139 +++++++++++++ 2 files changed, 334 insertions(+) create mode 100644 dnet-ariadneplus/src/test/resources/eu/dnetlib/wf_migration/new_agg_wf.xml create mode 100644 dnet-ariadneplus/src/test/resources/eu/dnetlib/wf_migration/old_agg_wf.xml diff --git a/dnet-ariadneplus/src/test/resources/eu/dnetlib/wf_migration/new_agg_wf.xml b/dnet-ariadneplus/src/test/resources/eu/dnetlib/wf_migration/new_agg_wf.xml new file mode 100644 index 0000000..e899548 --- /dev/null +++ b/dnet-ariadneplus/src/test/resources/eu/dnetlib/wf_migration/new_agg_wf.xml @@ -0,0 +1,195 @@ + +
+ + + + + +
+ + + Aggregate, enrich and index AriadnePlus content + + Aggregate, enrich and index AriadnePlus content on shadow and public instance + + aggregator + 50 + + + + INCREMENTAL + 36aadfcc-648b-43f7-96f3-b4ae612b3fa4_TURTdG9yZURTUmVzb3VyY2VzL01EU3RvcmVEU1Jlc291cmNlVHlwZQ== + false + REFRESH + + + + + 971d3cf8-b720-4f29-a16d-f4453c962343_TURTdG9yZURTUmVzb3VyY2VzL01EU3RvcmVEU1Jlc291cmNlVHlwZQ== + null + transformed + REFRESH + + https://aggregator.ariadne.d4science.org/ariadneplus-graphdb + https://aggregator.ariadne.d4science.org/ariadneplus-graphdb-public + + + + + Collect metadata + + + + + + + + + + + + + + + + + + + Transform records + + + + + + + + + + + + + + + + + + + + + + + + + + Index record + + + + + + + + + + + + + + + + + + + + + Publish records to the Staging GraphDB + + + + + + + + + + + + + + + + + + Enrich GraphDB with sparql update query + + + + + + + + + + + + + + + + + + Index on Staging Elasticsearch all records of an API from GraphDB + + + + + + + + + + + + + + + + + Publish records to the public GraphDB and Elasticsearch + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 9 9 9 ? * * + 10080 + + + +
\ No newline at end of file diff --git a/dnet-ariadneplus/src/test/resources/eu/dnetlib/wf_migration/old_agg_wf.xml b/dnet-ariadneplus/src/test/resources/eu/dnetlib/wf_migration/old_agg_wf.xml new file mode 100644 index 0000000..a41b9c9 --- /dev/null +++ b/dnet-ariadneplus/src/test/resources/eu/dnetlib/wf_migration/old_agg_wf.xml @@ -0,0 +1,139 @@ + +
+ + + + + +
+ + Aggregate Metadata (X3M) + Collect, transform with X3M, and export metadata + + aggregator + 50 + + + + REFRESH + 6f7c21a0-a7be-4724-be89-833b33ad5e0a_TURTdG9yZURTUmVzb3VyY2VzL01EU3RvcmVEU1Jlc291cmNlVHlwZQ== + false + REFRESH + false + e1a85324-8f54-45c1-8513-208693a41666_VHJhbnNmb3JtYXRpb25SdWxlRFNSZXNvdXJjZXMvVHJhbnNmb3JtYXRpb25SdWxlRFNSZXNvdXJjZVR5cGU= + e508ddc7-ff5e-45dc-9116-96a2201d0bc9_Q2xlYW5lckRTUmVzb3VyY2VzL0NsZWFuZXJEU1Jlc291cmNlVHlwZQ== + af07e923-424b-4d5e-9677-66582db7efdd_TURTdG9yZURTUmVzb3VyY2VzL01EU3RvcmVEU1Jlc291cmNlVHlwZQ== + 84c5cd33-b152-4fae-8796-fea0685a6c83_SW5kZXhEU1Jlc291cmNlcy9JbmRleERTUmVzb3VyY2VUeXBl + transformed + REFRESH + https://mapping.d4science.org/3MEditor/Services?id=591&output=text/xml&method=export + https://aggregator.ariadne.d4science.org/ariadneplus-graphdb + + + + Collect metadata + + + + + + + + + + + + + + + + + + + Transform records + + + + + + + + + + + + + + + + + + + + + + + + + + Index record + + + + + + + + + + + + + + + + + + + Publish records to GraphDB + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 9 9 9 ? * * + 10080 + + + wf_20200605_160619_405 + 2020-06-05T16:07:19+02:00 + SUCCESS + + + +
\ No newline at end of file From 3e28f8fd57c2cf523a8544a2669c4f1d6e629778 Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Mon, 14 Dec 2020 18:57:36 +0100 Subject: [PATCH 05/10] increasing mid version number --- dnet-ariadneplus/pom.xml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/dnet-ariadneplus/pom.xml b/dnet-ariadneplus/pom.xml index 3ba99bd..3abf3a6 100644 --- a/dnet-ariadneplus/pom.xml +++ b/dnet-ariadneplus/pom.xml @@ -10,9 +10,9 @@ eu.dnetlib dnet-ariadneplus jar - 1.0.3-SNAPSHOT + 1.1.0-SNAPSHOT - scm:svn:https://svn.driver.research-infrastructures.eu/driver/dnet50/modules/dnet-ariadneplus/trunk + scm:git:https://code-repo.d4science.org/D-Net/AriadnePlus.git From fa3592b1b386bea51b752fe576e5b08b5e5ff509 Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Tue, 15 Dec 2020 17:06:52 +0100 Subject: [PATCH 06/10] added missing wf node --- .../workflows/repo-hi/full_aggregation_wf.xml.st | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st index b409e64..752194a 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/ariadneplus/workflows/repo-hi/full_aggregation_wf.xml.st @@ -174,6 +174,13 @@
+ + A Fake node + + + + + From e5eefef4113b31ebd4efa2a1113cb268983aba7f Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Wed, 16 Dec 2020 16:09:40 +0100 Subject: [PATCH 07/10] fixed param name --- .../bootstrap/profiles/workflows/templates/graphdb_template.xml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/graphdb_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/graphdb_template.xml index 4e2b2a8..dc8fe0d 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/graphdb_template.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/graphdb_template.xml @@ -13,7 +13,7 @@ - + From 6c150be5b22e7314499b38d4d0a17bdb1b17c712 Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Thu, 17 Dec 2020 13:53:26 +0100 Subject: [PATCH 08/10] added missing param --- .../profiles/workflows/templates/public_publishing_template.xml | 1 + 1 file changed, 1 insertion(+) diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml index 7f28a05..50048da 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml @@ -12,6 +12,7 @@ + From 0e30eccbaebc4b02addb5a25941403a5a5f829e3 Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Thu, 17 Dec 2020 17:56:13 +0100 Subject: [PATCH 09/10] fixed worng copy&paste, probably from an st file --- .../templates/public_publishing_template.xml | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml index 50048da..a615410 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml @@ -23,9 +23,9 @@ - - - + + + @@ -41,9 +41,9 @@ - - - + + + From 5f695ee5384c5bc39fc7fced7390d884daa3faaa Mon Sep 17 00:00:00 2001 From: Alessia Bardi Date: Thu, 17 Dec 2020 20:15:51 +0100 Subject: [PATCH 10/10] fixed worng copy&paste, probably from an st file...again --- .../workflows/templates/public_publishing_template.xml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml index a615410..0a8732f 100644 --- a/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml +++ b/dnet-ariadneplus/src/main/resources/eu/dnetlib/bootstrap/profiles/workflows/templates/public_publishing_template.xml @@ -59,9 +59,9 @@ - - - + + +