harvester-d4science/ckanext/harvest/harvesters/base.py

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import logging
import re
import uuid
from sqlalchemy.sql import update,and_, bindparam
from sqlalchemy.exc import InvalidRequestError
from ckan import plugins as p
from ckan import model
from ckan.model import Session, Package
from ckan.logic import ValidationError, NotFound, get_action
from ckan.logic.schema import default_create_package_schema
from ckan.lib.navl.validators import ignore_missing,ignore
from ckan.lib.munge import munge_title_to_name,substitute_ascii_equivalents
from ckanext.harvest.model import HarvestJob, HarvestObject, HarvestGatherError, \
HarvestObjectError
from ckan.plugins.core import SingletonPlugin, implements
from ckanext.harvest.interfaces import IHarvester
log = logging.getLogger(__name__)
def munge_tag(tag):
tag = substitute_ascii_equivalents(tag)
tag = tag.lower().strip()
return re.sub(r'[^a-zA-Z0-9 -]', '', tag).replace(' ', '-')
class HarvesterBase(SingletonPlugin):
'''
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Generic class for harvesters with helper functions
'''
implements(IHarvester)
config = None
def _gen_new_name(self, title):
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'''
Creates a URL friendly name from a title
If the name already exists, it will add some random characters at the end
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'''
name = munge_title_to_name(title).replace('_', '-')
while '--' in name:
name = name.replace('--', '-')
pkg_obj = Session.query(Package).filter(Package.name == name).first()
if pkg_obj:
return name + str(uuid.uuid4())[:5]
else:
return name
def _save_gather_error(self, message, job):
err = HarvestGatherError(message=message, job=job)
try:
err.save()
except InvalidRequestError:
Session.rollback()
err.save()
finally:
log.error(message)
def _save_object_error(self, message, obj, stage=u'Fetch', line=None):
err = HarvestObjectError(message=message,
object=obj,
stage=stage,
line=line)
try:
err.save()
except InvalidRequestError, e:
Session.rollback()
err.save()
finally:
log_message = '{0}, line {1}'.format(message,line) if line else message
log.debug(log_message)
def _create_harvest_objects(self, remote_ids, harvest_job):
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'''
Given a list of remote ids and a Harvest Job, create as many Harvest Objects and
return a list of their ids to be passed to the fetch stage.
TODO: Not sure it is worth keeping this function
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'''
try:
object_ids = []
if len(remote_ids):
for remote_id in remote_ids:
# Create a new HarvestObject for this identifier
obj = HarvestObject(guid = remote_id, job = harvest_job)
obj.save()
object_ids.append(obj.id)
return object_ids
else:
self._save_gather_error('No remote datasets could be identified', harvest_job)
except Exception, e:
self._save_gather_error('%r' % e.message, harvest_job)
def _create_or_update_package(self, package_dict, harvest_object):
'''
Creates a new package or updates an exisiting one according to the
package dictionary provided. The package dictionary should look like
the REST API response for a package:
http://ckan.net/api/rest/package/statistics-catalunya
Note that the package_dict must contain an id, which will be used to
check if the package needs to be created or updated (use the remote
dataset id).
If the remote server provides the modification date of the remote
package, add it to package_dict['metadata_modified'].
TODO: Not sure it is worth keeping this function. If useful it should
use the output of package_show logic function (maybe keeping support
for rest api based dicts
'''
try:
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# Change default schema
schema = default_create_package_schema()
schema['id'] = [ignore_missing, unicode]
schema['__junk'] = [ignore]
# Check API version
if self.config:
try:
api_version = int(self.config.get('api_version', 2))
except ValueError:
raise ValueError('api_version must be an integer')
#TODO: use site user when available
user_name = self.config.get('user', u'harvest')
else:
api_version = 2
user_name = u'harvest'
context = {
'model': model,
'session': Session,
'user': user_name,
'api_version': api_version,
'schema': schema,
'ignore_auth': True,
}
if self.config and self.config.get('clean_tags', False):
tags = package_dict.get('tags', [])
tags = [munge_tag(t) for t in tags if munge_tag(t) != '']
tags = list(set(tags))
package_dict['tags'] = tags
# Check if package exists
data_dict = {}
data_dict['id'] = package_dict['id']
try:
existing_package_dict = get_action('package_show')(context, data_dict)
# In case name has been modified when first importing. See issue #101.
package_dict['name'] = existing_package_dict['name']
# Check modified date
if not 'metadata_modified' in package_dict or \
package_dict['metadata_modified'] > existing_package_dict.get('metadata_modified'):
log.info('Package with GUID %s exists and needs to be updated' % harvest_object.guid)
# Update package
context.update({'id':package_dict['id']})
package_dict.setdefault('name',
existing_package_dict['name'])
new_package = get_action('package_update_rest')(context, package_dict)
else:
log.info('Package with GUID %s not updated, skipping...' % harvest_object.guid)
return
# Flag the other objects linking to this package as not current anymore
from ckanext.harvest.model import harvest_object_table
conn = Session.connection()
u = update(harvest_object_table) \
.where(harvest_object_table.c.package_id==bindparam('b_package_id')) \
.values(current=False)
conn.execute(u, b_package_id=new_package['id'])
# Flag this as the current harvest object
harvest_object.package_id = new_package['id']
harvest_object.current = True
harvest_object.save()
except NotFound:
# Package needs to be created
# Get rid of auth audit on the context otherwise we'll get an
# exception
context.pop('__auth_audit', None)
# Set name for new package to prevent name conflict, see issue #117
if package_dict.get('name', None):
package_dict['name'] = self._gen_new_name(package_dict['name'])
else:
package_dict['name'] = self._gen_new_name(package_dict['title'])
log.info('Package with GUID %s does not exist, let\'s create it' % harvest_object.guid)
harvest_object.current = True
harvest_object.package_id = package_dict['id']
# Defer constraints and flush so the dataset can be indexed with
# the harvest object id (on the after_show hook from the harvester
# plugin)
harvest_object.add()
model.Session.execute('SET CONSTRAINTS harvest_object_package_id_fkey DEFERRED')
model.Session.flush()
new_package = get_action('package_create_rest')(context, package_dict)
Session.commit()
return True
except ValidationError,e:
log.exception(e)
self._save_object_error('Invalid package with GUID %s: %r'%(harvest_object.guid,e.error_dict),harvest_object,'Import')
except Exception, e:
log.exception(e)
self._save_object_error('%r'%e,harvest_object,'Import')
return None