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fixed popular tags in home 

Co-authored-by: Maicol Battistini <maicolbattistini@live.it>
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Elia Bellavista 2024-07-25 13:07:17 +02:00
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# Contributor Covenant Code of Conduct
## Our Pledge
In the interest of fostering an open and welcoming environment, we as
contributors and maintainers pledge to making participation in our project and
our community a harassment-free experience for everyone, regardless of age, body
size, disability, ethnicity, sex characteristics, gender identity and expression,
level of experience, education, socio-economic status, nationality, personal
appearance, race, religion, or sexual identity and orientation.
## Our Standards
Examples of behavior that contributes to creating a positive environment
include:
* Using welcoming and inclusive language
* Being respectful of differing viewpoints and experiences
* Gracefully accepting constructive criticism
* Focusing on what is best for the community
* Showing empathy towards other community members
Examples of unacceptable behavior by participants include:
* The use of sexualized language or imagery and unwelcome sexual attention or
advances
* Trolling, insulting/derogatory comments, and personal or political attacks
* Public or private harassment
* Publishing others' private information, such as a physical or electronic
address, without explicit permission
* Other conduct which could reasonably be considered inappropriate in a
professional setting
## Our Responsibilities
Project maintainers are responsible for clarifying the standards of acceptable
behavior and are expected to take appropriate and fair corrective action in
response to any instances of unacceptable behavior.
Project maintainers have the right and responsibility to remove, edit, or
reject comments, commits, code, wiki edits, issues, and other contributions
that are not aligned to this Code of Conduct, or to ban temporarily or
permanently any contributor for other behaviors that they deem inappropriate,
threatening, offensive, or harmful.
## Scope
This Code of Conduct applies both within project spaces and in public spaces
when an individual is representing the project or its community. Examples of
representing a project or community include using an official project e-mail
address, posting via an official social media account, or acting as an appointed
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further defined and clarified by project maintainers.
## Enforcement
Instances of abusive, harassing, or otherwise unacceptable behavior may be
reported by contacting the project team at info@keitaro.com. All
complaints will be reviewed and investigated and will result in a response that
is deemed necessary and appropriate to the circumstances. The project team is
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Further details of specific enforcement policies may be posted separately.
Project maintainers who do not follow or enforce the Code of Conduct in good
faith may face temporary or permanent repercussions as determined by other
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## Attribution
This Code of Conduct is adapted from the [Contributor Covenant][homepage], version 1.4,
available at https://www.contributor-covenant.org/version/1/4/code-of-conduct.html
[homepage]: https://www.contributor-covenant.org
For answers to common questions about this code of conduct, see
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## How to contribute to Dockerized CKAN
#### **Did you find a bug?**
* **Ensure the bug was not already reported** by searching on GitHub under [Issues](https://github.com/keitaroinc/docker-ckan/issues).
* If you're unable to find an open issue addressing the problem, [open a new one](https://github.com/keitaroinc/docker-ckan/issues/new). Be sure to include a **title and clear description**, as much relevant information as possible, we include an issue template to help out in filling-in the issue.
#### **Did you write a patch that fixes a bug?**
* Open a new GitHub pull request with the patch.
* Ensure the PR description clearly describes the problem and solution. Include the relevant issue number if applicable.
#### **Do you intend to add a new feature or change an existing one?**
* [Create a new feature issue](https://github.com/keitaroinc/docker-ckan/issues/new) using the Feature Request template and describe your proposed changes
* Submit a pull request referring to the relevant feature issue/s
#### **Do you have questions about the source code?**
* Ask any question about how to use Dockerized CKAN in our [gitter chat](https://gitter.im/keitaroinc/docker-ckan).
Thanks!
Keitaro Team

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VERSION := $(shell git describe --tags --exact-match 2>/dev/null || echo latest)
DOCKERHUB_NAMESPACE ?= keitaro
IMAGE := ${DOCKERHUB_NAMESPACE}/ckan:${VERSION}
build:
docker build -t ${IMAGE} rootfs
push: build
docker push ${IMAGE}

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docker-ckan
Copyright (c) 2016 Keitaro AB

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# Roadmap
- [ ] Fix Filters in search pages
- [ ] fix tags page and popular tags section in homepage
- [ ] check if all requested plugins are working
- [ ]

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# Dockerized CKAN
[![build-status](https://github.com/keitaroinc/docker-ckan/workflows/Docker%20Image%20Build/badge.svg?branch=master)](https://github.com/keitaroinc/docker-ckan/actions) [![License][]][1] [![Docker Pulls][]][2] [![Chat on Gitter][]][3]
This repository contains base docker images, examples and docker-compose used to build and run CKAN.
We build and publish docker images built using this repository to Dockerhub:
- [CKAN docker images](https://hub.docker.com/r/keitaro/ckan).
- [Datapusher docker images](https://hub.docker.com/r/keitaro/ckan-datapusher)
and Github Container Registry:
- [CKAN docker images on GHCR](https://github.com/orgs/keitaroinc/packages/container/package/ckan)
- [Datapusher docker images on GHCR](https://github.com/orgs/keitaroinc/packages/container/package/datapusher)
Looking to run CKAN on Kubernetes? Check out our [CKAN Helm Chart](https://github.com/keitaroinc/ckan-helm)!
## Overview
Images are provided in two flavors:
- [Alpine Linux](https://alpinelinux.org/) based images
- [Ubuntu Focal](https://ubuntu.com/) based images are the ones ending with `-focal` in the tag name
The Docker containers include only the required extensions to start a CKAN instance. The docker images are built using a multi-stage docker approach in order to produce slim production grade docker images with the right libraries and configuration. This multi-stage approach allows us to build python binary wheels in the build stages that later on we install in the main stage.
Directory layout:
- [compose](./compose) - contains a docker-compose setup allowing users to spin up a CKAN setup easily using [docker-compose](https://docs.docker.com/compose/)
- [images](./images) - includes docker contexts for building all supported CKAN versions and datapusher
- [examples](./examples) - includes examples on how to extend the CKAN docker images and how to run them
## Running CKAN using docker-compose
To start CKAN using docker-compose, simply change into the *compose* directory and run
```sh
cd compose/2.9
docker-compose build
docker-compose up
```
Check if CKAN was succesfuly started on http://localhost:5000.
### Configuration
In order to configure CKAN within docker-compose we use both build/up time variables loaded via the [.env](./compose/2.9/.env) file, and runtime variables loaded via the [.ckan-env](./compose/2.9/.ckan-env) file.
Variables in the [.env](./compose/2.9/.env) file are loaded when running `docker-compose build` and `docker-compose up`, while variables in [.ckan-env](./compose/2.9/.ckan-env) file are used withing the CKAN container at runtime to configure CKAN and CKAN extensions using [ckanext-envvars](https://github.com/okfn/ckanext-envvars).
## Extending CKAN docker images
Check some examples of extending CKAN docker images in the [examples](./examples) directory.
We recommend to use a multi-stage approach to extend the docker images that we provide here. To extend the images the following Dockerfile structure is recommended:
```docker
###################
### Extensions ####
###################
FROM ghcr.io/keitaroinc/ckan:2.9.9 as extbuild
# Switch to the root user
USER root
# Install any system packages necessary to build extensions
# Make sure we install python 3.8, cause CKAN is not compatible with 3.9
RUN apk add --no-cache --repository=http://dl-cdn.alpinelinux.org/alpine/v3.13/main \
python3-dev=3.8.10-r0
# Fetch and build the custom CKAN extensions
RUN pip wheel --wheel-dir=/wheels git+https://github.com/acmecorp/ckanext-acme@0.0.1#egg=ckanext-acme
############
### MAIN ###
############
FROM ghcr.io/keitaroinc/ckan:2.9.9
# Add the custom extensions to the plugins list
ENV CKAN__PLUGINS envvars image_view text_view recline_view datastore datapusher acme
# Switch to the root user
USER root
COPY --from=extbuild /wheels /srv/app/ext_wheels
# Install and enable the custom extensions
RUN pip install --no-index --find-links=/srv/app/ext_wheels ckanext-acme && \
ckan config-tool ${APP_DIR}/production.ini "ckan.plugins = ${CKAN__PLUGINS}" && \
chown -R ckan:ckan /srv/app
# Remove wheels
RUN rm -rf /srv/app/ext_wheels
# Switch to the ckan user
USER ckan
```
### Adding init and afterinit scripts
You can add scripts to CKAN custom images and copy them to the *docker-entrypoint.d* directory. Any *.sh or *.py file in that directory will be executed before the main initialization script (prerun.py) is executed.
You can add scripts to CKAN custom images and copy them to the *docker-afterinit.d* directory. Any *.sh or *.py file in that directory will be executed after the main initialization script (prerun.py) is executed.
## Build
To build a CKAN image run:
```sh
docker build --tag ghcr.io/keitaroinc/ckan:2.9.9 images/ckan/2.9
```
The –-tag ghcr.io/keitaroinc/ckan:2.9.9 flag sets the image name to ghcr.io/keitaroinc/ckan:2.9.9 and 'images/ckan/2.9' at the end tells docker build to use the context into the specified directory where the Dockerfile and related contents are.
## Upload to DockerHub
>*It's recommended to upload built images to DockerHub*
To upload the image to DockerHub run:
```sh
docker push [options] <docker-hub-namespace>/ckan:<image-tag>
```
[License]: https://img.shields.io/badge/license-Apache--2.0-blue.svg?style=flat
[1]: https://opensource.org/licenses/Apache-2.0
[Docker Pulls]: https://img.shields.io/docker/pulls/keitaro/ckan.svg?style=flat
[2]: https://hub.docker.com/r/keitaro/ckan
[Chat on Gitter]: https://badges.gitter.im/gitterHQ/gitter.svg
[3]: https://gitter.im/keitaroinc/docker-ckan

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# Runtime configuration of CKAN enabled through ckanext-envvars
# Information about how it works: https://github.com/okfn/ckanext-envvars
# Note that variables here take presedence over build/up time variables in .env
DEVELOPMENT=true
# Set to true to disable CKAN from starting and serve a maintenance page
MAINTENANCE_MODE=false
# General Settings
CKAN_SITE_ID=default
CKAN_SITE_URL=http://localhost:5000
CKAN_PORT=5000
CKAN_MAX_UPLOAD_SIZE_MB=200
CKAN___BEAKER__SESSION__SECRET=CHANGE_ME
# See https://docs.ckan.org/en/latest/maintaining/configuration.html#api-token-settings
CKAN___API_TOKEN__JWT__ENCODE__SECRET=string:CHANGE_ME
CKAN___API_TOKEN__JWT__DECODE__SECRET=string:CHANGE_ME
# CKAN Plugins
CKAN__PLUGINS="envvars image_view text_view recline_view datastore datapusher spatial_metadata spatial_query d4science d4science_theme"
# CKAN requires storage path to be set in order for filestore to be enabled
CKAN__STORAGE_PATH=/srv/app/data
CKAN__WEBASSETS__PATH=/srv/app/data/webassets
# SYSADMIN settings, a sysadmin user is created automatically with the below credentials
CKAN_SYSADMIN_NAME=sysadmin
CKAN_SYSADMIN_PASSWORD=password
CKAN_SYSADMIN_EMAIL=sysadmin@ckantest.com
# Email settings
CKAN_SMTP_SERVER=smtp.corporateict.domain:25
CKAN_SMTP_STARTTLS=True
CKAN_SMTP_USER=user
CKAN_SMTP_PASSWORD=pass
CKAN_SMTP_MAIL_FROM=ckan@localhost
# Datapusher configuration
CKAN__DATAPUSHER__URL=http://datapusher:8000
CKAN__DATAPUSHER__CALLBACK_URL_BASE=http://ckan:5000/
CKAN__DATAPUSHER__API_TOKEN=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.eyJqdGkiOiJ6M0lGRGw4SVdFR3lVRzFYRHJ0cm56WmNmcDlzbmFuUHlUMjdqLXRVSW9nIiwiaWF0IjoxNjc3MDYwNjQ1fQ.ECCa0wU-FOOGpdE9_TTVj__2J9SfANRBD6gRClBvPk0
# CKAN__DATAPUSHER__API_TOKEN=replace_this_with_api_token_once_ckan_starts
# Solr configuration
CKAN_VERSION=2.10
CKAN_CORE_NAME=ckan

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###################
### Extensions
###################
FROM registry.trust-itservices.com/d4science/ckan-docker/ckan:2.10.4-focal as extbuild
# Switch to the root user
USER root
#install pip
RUN apt-get update
RUN apt-get install python3-dev python3-pip libxml2-dev libxslt1-dev libgeos-c1v5 -y
############
### MAIN
############
FROM registry.trust-itservices.com/d4science/ckan-docker/ckan:2.10.4-focal
# Add the custom extensions to the plugins list
ENV CKAN__PLUGINS envvars image_view text_view recline_view datastore datapusher spatial_metadata spatial_query d4science d4science_theme
# Switch to the root user
USER root
#COPY --from=extbuild /wheels /srv/app/ext_wheels
# Add requirements.txt to the image
COPY requirements.txt /srv/app/requirements.txt
# Install and enable the custom extensions
RUN pip install -r /srv/app/requirements.txt
RUN ckan config-tool ${APP_DIR}/production.ini "ckan.plugins = ${CKAN__PLUGINS}" && \
chown -R ckan:ckan /srv/app
# Remove wheels
RUN rm -rf /srv/app/ext_wheels
# Switch to the ckan user
# USER ckan

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{
"folders": [
{
"path": "../.."
}
],
"settings": {}
}

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# docker-compose build && docker-compose up -d
version: "3.8"
volumes:
ckan_data:
pg_data:
solr_data:
services:
ckan:
container_name: ckan
build:
context: .
networks:
- frontend
- backend
depends_on:
- db
- solr
ports:
- "0.0.0.0:${CKAN_PORT}:5000"
env_file:
- ./.ckan.env
environment:
- CKAN_SQLALCHEMY_URL=postgresql://ckan:${POSTGRES_PASSWORD}@db/ckan
- CKAN_DATASTORE_WRITE_URL=postgresql://ckan:${POSTGRES_PASSWORD}@db/datastore
- CKAN_DATASTORE_READ_URL=postgresql://datastore_ro:${DATASTORE_READONLY_PASSWORD}@db/datastore
- CKAN_SOLR_URL=http://solr:8983/solr/ckan
- CKAN_REDIS_URL=redis://redis:6379/1
- CKAN_SITE_URL=${CKAN_SITE_URL}
- CKAN_MAX_UPLOAD_SIZE_MB=${CKAN_MAX_UPLOAD_SIZE_MB}
- POSTGRES_PASSWORD=${POSTGRES_PASSWORD}
- DS_RO_PASS=${DATASTORE_READONLY_PASSWORD}
volumes:
- ckan_data:/srv/app/data
- ./src:/srv/app/src_extensions
- ./docker-entrypoint.d:/srv/app/docker-entrypoint.d
datapusher:
container_name: datapusher
image: ghcr.io/keitaroinc/datapusher:${DATAPUSHER_VERSION}
networks:
- frontend
- backend
ports:
- "8000:8000"
environment:
- DATAPUSHER_MAX_CONTENT_LENGTH=${DATAPUSHER_MAX_CONTENT_LENGTH}
- DATAPUSHER_CHUNK_SIZE=${DATAPUSHER_CHUNK_SIZE}
- DATAPUSHER_CHUNK_INSERT_ROWS=${DATAPUSHER_CHUNK_INSERT_ROWS}
- DATAPUSHER_DOWNLOAD_TIMEOUT=${DATAPUSHER_DOWNLOAD_TIMEOUT}
- DATAPUSHER_SSL_VERIFY=${DATA_PUSHER_SSL_VERIFY}
- DATAPUSHER_REWRITE_RESOURCES=${DATAPUSHER_REWRITE_RESOURCES}
- DATAPUSHER_REWRITE_URL=${DATAPUSHER_REWRITE_URL}
db:
container_name: db
build:
context: .
dockerfile: postgresql/Dockerfile
args:
- DS_RO_PASS=${DATASTORE_READONLY_PASSWORD}
- POSTGRES_PASSWORD=${POSTGRES_PASSWORD}
networks:
- backend
environment:
- DS_RO_PASS=${DATASTORE_READONLY_PASSWORD}
- POSTGRES_PASSWORD=${POSTGRES_PASSWORD}
- PGDATA=/var/lib/postgresql/data/db
volumes:
- pg_data:/var/lib/postgresql/data
healthcheck:
test: ["CMD", "pg_isready", "-U", "ckan"]
solr:
container_name: solr
image: ckan/ckan-solr:2.10-solr9-spatial
networks:
- backend
env_file:
- ./.ckan.env
environment:
- CKAN_CORE_NAME=${CKAN_CORE_NAME}
- CKAN_VERSION=${CKAN_VERSION}
volumes:
- solr_data:/var/solr
- ${PWD}/solr8/ckan_init_solr.sh:/docker-entrypoint-initdb.d/ckan_init_solr.sh
redis:
container_name: redis
image: redis:${REDIS_VERSION}
networks:
- backend
networks:
frontend:
backend:

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ckan config-tool ${APP_DIR}/production.ini "ckan.devserver.watch_patterns = **/*.py **/*.html"

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compose/2.10/docker-entrypoint.d/01_setup_spatial.sh Normal file
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#!/bin/bash
if [[ $CKAN__PLUGINS == *"spatial_metadata"* ]]; then
echo "Configuring CKAN spatial ..."
ckan config-tool ${APP_DIR}/production.ini "ckanext.spatial.common_map.type=Stadia.StamenTerrain"
ckan config-tool ${APP_DIR}/production.ini "ckanext.spatial.common_map.max_zoom=18"
# ckan config-tool $CKAN_INI "ckanext.spatial.search_backend = solr-spatial-field"
ckan config-tool ${APP_DIR}/production.ini "ckan.search.solr_allowed_query_parsers = frange"
# forse è da aggiungere un qualche tipo di key per production
else
echo "Not configuring spatial, plugin not enabled."
fi

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SRC_EXTENSIONS_DIR=/srv/app/src_extensions
# Install any local extensions in the src_extensions volume
echo "Looking for local extensions to install..."
echo "Extension dir ($SRC_EXTENSIONS_DIR) contents:"
ls -la $SRC_EXTENSIONS_DIR
for i in $SRC_EXTENSIONS_DIR/*
do
if [ -d $i ];
then
if [ -f $i/pip-requirements.txt ];
then
pip install -r $i/pip-requirements.txt
echo "Found requirements file in $i"
fi
if [ -f $i/requirements.txt ];
then
pip install -r $i/requirements.txt
echo "Found requirements file in $i"
fi
if [ -f $i/dev-requirements.txt ];
then
pip install -r $i/dev-requirements.txt
echo "Found dev-requirements file in $i"
fi
if [ -f $i/setup.py ];
then
cd $i
python3 $i/setup.py develop
echo "Found setup.py file in $i"
cd $APP_DIR
fi
# Point `use` in test.ini to location of `test-core.ini`
if [ -f $i/test.ini ];
then
echo "Updating \`test.ini\` reference to \`test-core.ini\` for plugin $i"
ckan config-tool $i/test.ini "use = config:../../src/ckan/test-core.ini"
fi
fi
done

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FROM postgis/postgis:14-3.2-alpine
# Allow connections; we don't map out any ports so only linked docker containers can connect
RUN echo "host all all 0.0.0.0/0 md5" >> /var/lib/postgresql/data/pg_hba.conf
# Customize default user/pass/db
ENV POSTGRES_DB ckan
ENV POSTGRES_USER ckan
ARG POSTGRES_PASSWORD
ARG DS_RO_PASS
# Include datastore setup scripts
COPY ./postgresql/docker-entrypoint-initdb.d /docker-entrypoint-initdb.d

8
compose/2.10/postgresql/docker-entrypoint-initdb.d/00_create_datastore.sh Normal file
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#!/bin/bash
set -e
psql -v ON_ERROR_STOP=1 --username "$POSTGRES_USER" <<-EOSQL
CREATE ROLE datastore_ro NOSUPERUSER NOCREATEDB NOCREATEROLE LOGIN PASSWORD '$DS_RO_PASS';
CREATE DATABASE datastore OWNER ckan ENCODING 'utf-8';
GRANT ALL PRIVILEGES ON DATABASE datastore TO ckan;
EOSQL

2
compose/2.10/postgresql/docker-entrypoint-initdb.d/20_postgis_permissions.sql Normal file
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ALTER VIEW geometry_columns OWNER TO ckan;
ALTER TABLE spatial_ref_sys OWNER TO ckan;

3
compose/2.10/requirements.txt Normal file
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# Spatial
-e git+https://github.com/ckan/ckanext-spatial.git@v2.1.1#egg=ckanext-spatial
-r https://raw.githubusercontent.com/ckan/ckanext-spatial/v2.1.1/requirements.txt

41
compose/2.10/solr8/ckan_init_solr.sh Executable file
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#!/bin/bash
#
# Initialize SOLR for CKAN by creating a ckan core
# Arguments are supplied via environment variables: CKAN_CORE_NAME CKAN_VERSION
# Example:
# CKAN_CORE_NAME=ckan
# CKAN_VERSION=2.9.7
set -e
MAJOR_VERSION=`echo $CKAN_VERSION | cut -d "." -f 1`
MINOR_VERSION=`echo $CKAN_VERSION | cut -d "." -f 2`
CKAN_SOLR_SCHEMA_URL=https://raw.githubusercontent.com/ckan/ckan/`echo $MAJOR_VERSION.$MINOR_VERSION`/ckan/config/solr/schema.xml
echo "Check whether managed schema exists for CKAN $CKAN_VERSION"
if ! curl --output /dev/null --silent --head --fail "$CKAN_SOLR_SCHEMA_URL"; then
echo "Can't find CKAN SOLR schema at URL: $CKAN_SOLR_SCHEMA_URL. Exiting..."
exit 1
fi
echo "Check whether SOLR is initialized for CKAN"
CORESDIR=/var/solr/data
COREDIR="$CORESDIR/$CKAN_CORE_NAME"
if [ -d "$COREDIR" ]; then
echo "SOLR already initialized, skipping initialization"
else
echo "Initializing SOLR core $CKAN_CORE_NAME for CKAN $CKAN_VERSION"
# init script for handling an empty /var/solr
/opt/docker-solr/scripts/init-var-solr
# Precreate CKAN core
/opt/docker-solr/scripts/precreate-core $CKAN_CORE_NAME
# Replace the managed schema with CKANs schema
echo "Adding CKAN managed schema"
curl $CKAN_SOLR_SCHEMA_URL -o /var/solr/data/$CKAN_CORE_NAME/conf/managed-schema -s
echo "SOLR initialized"
fi

5
compose/2.10/src/ckanext-d4science/.coveragerc Normal file
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[report]
omit =
*/site-packages/*
*/python?.?/*
ckan/*

42
compose/2.10/src/ckanext-d4science/.gitignore vendored Normal file
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.ropeproject
node_modules
bower_components
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
# C extensions
*.so
# Distribution / packaging
.Python
env/
build/
develop-eggs/
dist/
sdist/
*.egg-info/
.installed.cfg
*.egg
# PyInstaller
# Usually these files are written by a python script from a template
# before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec
# Installer logs
pip-log.txt
pip-delete-this-directory.txt
# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.cache
nosetests.xml
coverage.xml
# Sphinx documentation
docs/_build/

661
compose/2.10/src/ckanext-d4science/LICENSE Normal file
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GNU AFFERO GENERAL PUBLIC LICENSE
Version 3, 19 November 2007
Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
Everyone is permitted to copy and distribute verbatim copies
of this license document, but changing it is not allowed.
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our General Public Licenses are intended to guarantee your freedom to
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When we speak of free software, we are referring to freedom, not
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Developers that use our General Public Licenses protect your rights
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The GNU Affero General Public License is designed specifically to
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include README.rst
include LICENSE
include requirements.txt
recursive-include ckanext/d4science *.html *.json *.js *.less *.css *.mo *.yml
recursive-include ckanext/d4science/migration *.ini *.py *.mako

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[![Tests](https://github.com/d4science/ckanext-d4science/workflows/Tests/badge.svg?branch=main)](https://github.com/d4science/ckanext-d4science/actions)
# ckanext-d4science
**TODO:** Put a description of your extension here: What does it do? What features does it have? Consider including some screenshots or embedding a video!
## Requirements
**TODO:** For example, you might want to mention here which versions of CKAN this
extension works with.
If your extension works across different versions you can add the following table:
Compatibility with core CKAN versions:
| CKAN version | Compatible? |
| --------------- | ------------- |
| 2.6 and earlier | not tested |
| 2.7 | not tested |
| 2.8 | not tested |
| 2.9 | not tested |
Suggested values:
* "yes"
* "not tested" - I can't think of a reason why it wouldn't work
* "not yet" - there is an intention to get it working
* "no"
## Installation
**TODO:** Add any additional install steps to the list below.
For example installing any non-Python dependencies or adding any required
config settings.
To install ckanext-d4science:
1. Activate your CKAN virtual environment, for example:
. /usr/lib/ckan/default/bin/activate
2. Clone the source and install it on the virtualenv
git clone https://github.com/d4science/ckanext-d4science.git
cd ckanext-d4science
pip install -e .
pip install -r requirements.txt
3. Add `d4science` to the `ckan.plugins` setting in your CKAN
config file (by default the config file is located at
`/etc/ckan/default/ckan.ini`).
4. Restart CKAN. For example if you've deployed CKAN with Apache on Ubuntu:
sudo service apache2 reload
## Config settings
None at present
**TODO:** Document any optional config settings here. For example:
# The minimum number of hours to wait before re-checking a resource
# (optional, default: 24).
ckanext.d4science.some_setting = some_default_value
## Developer installation
To install ckanext-d4science for development, activate your CKAN virtualenv and
do:
git clone https://github.com/d4science/ckanext-d4science.git
cd ckanext-d4science
python setup.py develop
pip install -r dev-requirements.txt
## Tests
To run the tests, do:
pytest --ckan-ini=test.ini
## Releasing a new version of ckanext-d4science
If ckanext-d4science should be available on PyPI you can follow these steps to publish a new version:
1. Update the version number in the `setup.py` file. See [PEP 440](http://legacy.python.org/dev/peps/pep-0440/#public-version-identifiers) for how to choose version numbers.
2. Make sure you have the latest version of necessary packages:
pip install --upgrade setuptools wheel twine
3. Create a source and binary distributions of the new version:
python setup.py sdist bdist_wheel && twine check dist/*
Fix any errors you get.
4. Upload the source distribution to PyPI:
twine upload dist/*
5. Commit any outstanding changes:
git commit -a
git push
6. Tag the new release of the project on GitHub with the version number from
the `setup.py` file. For example if the version number in `setup.py` is
0.0.1 then do:
git tag 0.0.1
git push --tags
## License
[AGPL](https://www.gnu.org/licenses/agpl-3.0.en.html)

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# encoding: utf-8
# this is a namespace package
try:
import pkg_resources
pkg_resources.declare_namespace(__name__)
except ImportError:
import pkgutil
__path__ = pkgutil.extend_path(__path__, __name__)

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ckan.module("d4science-module", function ($, _) {
"use strict";
return {
options: {
debug: false,
},
initialize: function () {},
};
});

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/*
body {
border-radius: 0;
}
*/

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# d4science-js:
# filter: rjsmin
# output: ckanext-d4science/%(version)s-d4science.js
# contents:
# - js/d4science.js
# extra:
# preload:
# - base/main
# d4science-css:
# filter: cssrewrite
# output: ckanext-d4science/%(version)s-d4science.css
# contents:
# - css/d4science.css

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import click
@click.group(short_help="d4science CLI.")
def d4science():
"""d4science CLI.
"""
pass
@d4science.command()
@click.argument("name", default="d4science")
def command(name):
"""Docs.
"""
click.echo("Hello, {name}!".format(name=name))
def get_commands():
return [d4science]

9
compose/2.10/src/ckanext-d4science/ckanext/d4science/helpers.py Normal file
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def d4science_hello():
return "Hello, d4science!"
def get_helpers():
return {
"d4science_hello": d4science_hello,
}

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import ckan.plugins.toolkit as tk
import ckanext.d4science.logic.schema as schema
@tk.side_effect_free
def d4science_get_sum(context, data_dict):
tk.check_access(
"d4science_get_sum", context, data_dict)
data, errors = tk.navl_validate(
data_dict, schema.d4science_get_sum(), context)
if errors:
raise tk.ValidationError(errors)
return {
"left": data["left"],
"right": data["right"],
"sum": data["left"] + data["right"]
}
def get_actions():
return {
'd4science_get_sum': d4science_get_sum,
}

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import ckan.plugins.toolkit as tk
@tk.auth_allow_anonymous_access
def d4science_get_sum(context, data_dict):
return {"success": True}
def get_auth_functions():
return {
"d4science_get_sum": d4science_get_sum,
}

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import ckan.plugins.toolkit as tk
def d4science_get_sum():
not_empty = tk.get_validator("not_empty")
convert_int = tk.get_validator("convert_int")
return {
"left": [not_empty, convert_int],
"right": [not_empty, convert_int]
}

13
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import ckan.plugins.toolkit as tk
def d4science_required(value):
if not value or value is tk.missing:
raise tk.Invalid(tk._("Required"))
return value
def get_validators():
return {
"d4science_required": d4science_required,
}

77
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import ckan.plugins as plugins
import ckan.plugins.toolkit as toolkit
from ckan.views.resource import Blueprint
from ckanext.d4science import helpers
from ckanext.d4science.logic import action, auth
from ckanext.d4science.logic import validators
# import ckanext.d4science.cli as cli
# import ckanext.d4science.helpers as helpers
# import ckanext.d4science.views as views
# from ckanext.d4science.logic import (
# action, auth, validators
# )
class D4SciencePlugin(plugins.SingletonPlugin):
plugins.implements(plugins.IConfigurer)
plugins.implements(plugins.IAuthFunctions)
plugins.implements(plugins.IActions)
# plugins.implements(plugins.IClick)
plugins.implements(plugins.ITemplateHelpers)
plugins.implements(plugins.IValidators)
#ckan 2.10
plugins.implements(plugins.IBlueprint)
# IConfigurer
def update_config(self, config_):
toolkit.add_template_directory(config_, "templates")
toolkit.add_public_directory(config_, "public")
toolkit.add_resource("assets", "d4science")
# IAuthFunctions
def get_auth_functions(self):
return auth.get_auth_functions()
# IActions
def get_actions(self):
return action.get_actions()
# IBlueprint
# def get_blueprint(self):
# return views.get_blueprints()
def get_blueprint(self):
blueprint = Blueprint('foo', self.__module__)
# rules = [
# ('/group', 'group_index', custom_group_index),
# ]
# for rule in rules:
# blueprint.add_url_rule(*rule)
return blueprint
# IClick
# def get_commands(self):
# return cli.get_commands()
# ITemplateHelpers
def get_helpers(self):
return helpers.get_helpers()
# IValidators
def get_validators(self):
return validators.get_validators()

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0
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0
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13
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"""Tests for action.py."""
import pytest
import ckan.tests.helpers as test_helpers
@pytest.mark.ckan_config("ckan.plugins", "d4science")
@pytest.mark.usefixtures("with_plugins")
def test_d4science_get_sum():
result = test_helpers.call_action(
"d4science_get_sum", left=10, right=30)
assert result["sum"] == 40

19
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"""Tests for auth.py."""
import pytest
import ckan.tests.factories as factories
import ckan.tests.helpers as test_helpers
import ckan.model as model
@pytest.mark.ckan_config("ckan.plugins", "d4science")
@pytest.mark.usefixtures("with_request_context", "with_plugins", "clean_db")
def test_d4science_get_sum():
user = factories.User()
context = {
"user": user["name"],
"model": model
}
assert test_helpers.call_auth(
"d4science_get_sum", context=context)

16
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"""Tests for validators.py."""
import pytest
import ckan.plugins.toolkit as tk
from ckanext.d4science.logic import validators
def test_d4science_reauired_with_valid_value():
assert validators.d4science_required("value") == "value"
def test_d4science_reauired_with_invalid_value():
with pytest.raises(tk.Invalid):
validators.d4science_required(None)

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"""Tests for helpers.py."""
import ckanext.d4science.helpers as helpers
def test_d4science_hello():
assert helpers.d4science_hello() == "Hello, d4science!"

56
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"""
Tests for plugin.py.
Tests are written using the pytest library (https://docs.pytest.org), and you
should read the testing guidelines in the CKAN docs:
https://docs.ckan.org/en/2.9/contributing/testing.html
To write tests for your extension you should install the pytest-ckan package:
pip install pytest-ckan
This will allow you to use CKAN specific fixtures on your tests.
For instance, if your test involves database access you can use `clean_db` to
reset the database:
import pytest
from ckan.tests import factories
@pytest.mark.usefixtures("clean_db")
def test_some_action():
dataset = factories.Dataset()
# ...
For functional tests that involve requests to the application, you can use the
`app` fixture:
from ckan.plugins import toolkit
def test_some_endpoint(app):
url = toolkit.url_for('myblueprint.some_endpoint')
response = app.get(url)
assert response.status_code == 200
To temporary patch the CKAN configuration for the duration of a test you can use:
import pytest
@pytest.mark.ckan_config("ckanext.myext.some_key", "some_value")
def test_some_action():
pass
"""
import ckanext.d4science.plugin as plugin
@pytest.mark.ckan_config("ckan.plugins", "d4science")
@pytest.mark.usefixtures("with_plugins")
def test_plugin():
assert plugin_loaded("d4science")

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"""Tests for views.py."""
import pytest
import ckanext.d4science.validators as validators
import ckan.plugins.toolkit as tk
@pytest.mark.ckan_config("ckan.plugins", "d4science")
@pytest.mark.usefixtures("with_plugins")
def test_d4science_blueprint(app, reset_db):
resp = app.get(tk.h.url_for("d4science.page"))
assert resp.status_code == 200
assert resp.body == "Hello, d4science!"

17
compose/2.10/src/ckanext-d4science/ckanext/d4science/views.py Normal file
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from flask import Blueprint
d4science = Blueprint(
"d4science", __name__)
def page():
return "Hello, d4science!"
d4science.add_url_rule(
"/d4science/page", view_func=page)
def get_blueprints():
return [d4science]

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pytest-ckan

0
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[metadata]
name = ckanext-d4science
version = 0.0.1
description = d4science custom extensions
long_description = file: README.md
long_description_content_type = text/markdown
url = https://github.com/d4science/ckanext-d4science
author = d4science
author_email = info@d4science.org
license = AGPL
classifiers =
Development Status :: 4 - Beta
License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)
Programming Language :: Python :: 3.7
Programming Language :: Python :: 3.8
Programming Language :: Python :: 3.9
Programming Language :: Python :: 3.10
keywords = CKAN
[options]
packages = find:
namespace_packages = ckanext
install_requires =
include_package_data = True
[options.entry_points]
ckan.plugins =
d4science = ckanext.d4science.plugin:D4SciencePlugin
babel.extractors =
ckan = ckan.lib.extract:extract_ckan
[options.extras_require]
[extract_messages]
keywords = translate isPlural
add_comments = TRANSLATORS:
output_file = ckanext/d4science/i18n/ckanext-d4science.pot
width = 80
[init_catalog]
domain = ckanext-d4science
input_file = ckanext/d4science/i18n/ckanext-d4science.pot
output_dir = ckanext/d4science/i18n
[update_catalog]
domain = ckanext-d4science
input_file = ckanext/d4science/i18n/ckanext-d4science.pot
output_dir = ckanext/d4science/i18n
previous = true
[compile_catalog]
domain = ckanext-d4science
directory = ckanext/d4science/i18n
statistics = true
[tool:pytest]
filterwarnings =
ignore::sqlalchemy.exc.SADeprecationWarning
ignore::sqlalchemy.exc.SAWarning
ignore::DeprecationWarning
addopts = --ckan-ini test.ini

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# -*- coding: utf-8 -*-
from setuptools import setup
setup(
# If you are changing from the default layout of your extension, you may
# have to change the message extractors, you can read more about babel
# message extraction at
# http://babel.pocoo.org/docs/messages/#extraction-method-mapping-and-configuration
message_extractors={
'ckanext': [
('**.py', 'python', None),
('**.js', 'javascript', None),
('**/templates/**.html', 'ckan', None),
],
}
)

45
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[DEFAULT]
debug = false
smtp_server = localhost
error_email_from = ckan@localhost
[app:main]
use = config:../../src/ckan/test-core.ini
# Insert any custom config settings to be used when running your extension's
# tests here. These will override the one defined in CKAN core's test-core.ini
ckan.plugins = d4science
# Logging configuration
[loggers]
keys = root, ckan, sqlalchemy
[handlers]
keys = console
[formatters]
keys = generic
[logger_root]
level = WARN
handlers = console
[logger_ckan]
qualname = ckan
handlers =
level = INFO
[logger_sqlalchemy]
handlers =
qualname = sqlalchemy.engine
level = WARN
[handler_console]
class = StreamHandler
args = (sys.stderr,)
level = NOTSET
formatter = generic
[formatter_generic]
format = %(asctime)s %(levelname)-5.5s [%(name)s] %(message)s

17
compose/2.10/src/ckanext-d4science_theme/.project Normal file
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<?xml version="1.0" encoding="UTF-8"?>
<projectDescription>
<name>ckanext-d4science_theme</name>
<comment></comment>
<projects>
</projects>
<buildSpec>
<buildCommand>
<name>org.python.pydev.PyDevBuilder</name>
<arguments>
</arguments>
</buildCommand>
</buildSpec>
<natures>
<nature>org.python.pydev.pythonNature</nature>
</natures>
</projectDescription>

2
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eclipse.preferences.version=1
encoding/setup.py=utf-8

661
compose/2.10/src/ckanext-d4science_theme/LICENSE Normal file
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@ -0,0 +1,661 @@
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If you convey a covered work, knowingly relying on a patent license,
and the Corresponding Source of the work is not available for anyone
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then you must either (1) cause the Corresponding Source to be so
available, or (2) arrange to deprive yourself of the benefit of the
patent license for this particular work, or (3) arrange, in a manner
consistent with the requirements of this License, to extend the patent
license to downstream recipients. "Knowingly relying" means you have
actual knowledge that, but for the patent license, your conveying the
covered work in a country, or your recipient's use of the covered work
in a country, would infringe one or more identifiable patents in that
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If, pursuant to or in connection with a single transaction or
arrangement, you convey, or propagate by procuring conveyance of, a
covered work, and grant a patent license to some of the parties
receiving the covered work authorizing them to use, propagate, modify
or convey a specific copy of the covered work, then the patent license
you grant is automatically extended to all recipients of the covered
work and works based on it.
A patent license is "discriminatory" if it does not include within
the scope of its coverage, prohibits the exercise of, or is
conditioned on the non-exercise of one or more of the rights that are
specifically granted under this License. You may not convey a covered
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in the business of distributing software, under which you make payment
to the third party based on the extent of your activity of conveying
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for and in connection with specific products or compilations that
contain the covered work, unless you entered into that arrangement,
or that patent license was granted, prior to 28 March 2007.
Nothing in this License shall be construed as excluding or limiting
any implied license or other defenses to infringement that may
otherwise be available to you under applicable patent law.
12. No Surrender of Others' Freedom.
If conditions are imposed on you (whether by court order, agreement or
otherwise) that contradict the conditions of this License, they do not
excuse you from the conditions of this License. If you cannot convey a
covered work so as to satisfy simultaneously your obligations under this
License and any other pertinent obligations, then as a consequence you may
not convey it at all. For example, if you agree to terms that obligate you
to collect a royalty for further conveying from those to whom you convey
the Program, the only way you could satisfy both those terms and this
License would be to refrain entirely from conveying the Program.
13. Remote Network Interaction; Use with the GNU General Public License.
Notwithstanding any other provision of this License, if you modify the
Program, your modified version must prominently offer all users
interacting with it remotely through a computer network (if your version
supports such interaction) an opportunity to receive the Corresponding
Source of your version by providing access to the Corresponding Source
from a network server at no charge, through some standard or customary
means of facilitating copying of software. This Corresponding Source
shall include the Corresponding Source for any work covered by version 3
of the GNU General Public License that is incorporated pursuant to the
following paragraph.
Notwithstanding any other provision of this License, you have
permission to link or combine any covered work with a work licensed
under version 3 of the GNU General Public License into a single
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License will continue to apply to the part which is the covered work,
but the work with which it is combined will remain governed by version
3 of the GNU General Public License.
14. Revised Versions of this License.
The Free Software Foundation may publish revised and/or new versions of
the GNU Affero General Public License from time to time. Such new versions
will be similar in spirit to the present version, but may differ in detail to
address new problems or concerns.
Each version is given a distinguishing version number. If the
Program specifies that a certain numbered version of the GNU Affero General
Public License "or any later version" applies to it, you have the
option of following the terms and conditions either of that numbered
version or of any later version published by the Free Software
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GNU Affero General Public License, you may choose any version ever published
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If the Program specifies that a proxy can decide which future
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IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF
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GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE
USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF
DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD
PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS),
EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
SUCH DAMAGES.
17. Interpretation of Sections 15 and 16.
If the disclaimer of warranty and limitation of liability provided
above cannot be given local legal effect according to their terms,
reviewing courts shall apply local law that most closely approximates
an absolute waiver of all civil liability in connection with the
Program, unless a warranty or assumption of liability accompanies a
copy of the Program in return for a fee.
END OF TERMS AND CONDITIONS
How to Apply These Terms to Your New Programs
If you develop a new program, and you want it to be of the greatest
possible use to the public, the best way to achieve this is to make it
free software which everyone can redistribute and change under these terms.
To do so, attach the following notices to the program. It is safest
to attach them to the start of each source file to most effectively
state the exclusion of warranty; and each file should have at least
the "copyright" line and a pointer to where the full notice is found.
<one line to give the program's name and a brief idea of what it does.>
Copyright (C) <year> <name of author>
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU Affero General Public License as published
by the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU Affero General Public License for more details.
You should have received a copy of the GNU Affero General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
Also add information on how to contact you by electronic and paper mail.
If your software can interact with users remotely through a computer
network, you should also make sure that it provides a way for users to
get its source. For example, if your program is a web application, its
interface could display a "Source" link that leads users to an archive
of the code. There are many ways you could offer source, and different
solutions will be better for different programs; see section 13 for the
specific requirements.
You should also get your employer (if you work as a programmer) or school,
if any, to sign a "copyright disclaimer" for the program, if necessary.
For more information on this, and how to apply and follow the GNU AGPL, see
<http://www.gnu.org/licenses/>.

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include README.rst
recursive-include ckanext/d4science_theme *.html *.json *.js *.less *.css

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============
ckanext-d4science_theme
============
The CKAN extension that implements the D4Science theme template used by D4Science Catalogues
------------
Requirements
------------
None
------------
Installation
------------
To install ckanext-d4science_theme:
1. Activate your CKAN virtual environment, for example::
. /usr/lib/ckan/default/bin/activate
2. Install the ckanext-d4science_theme Python package into your virtual environment::
pip install ckanext-d4science_theme
3. Add ``d4science_theme`` to the ``ckan.plugins`` setting in your CKAN
config file (by default the config file is located at
``/etc/ckan/default/production.ini``).
4. Restart CKAN. For example if you've deployed CKAN with Apache on Ubuntu::
sudo service apache2 reload
---------------
Config Settings
---------------
Document any optional config settings here. For example::
# The minimum number of hours to wait before re-checking a resource
# (optional, default: 24).
ckanext.d4science_theme.some_setting = some_default_value
------------------------
Development Installation
------------------------
To install ckanext-d4science_theme for development, activate your CKAN virtualenv and
do::
git clone https://code-repo.d4science.org/CKAN-Extensions/ckanext-d4science_theme.git
cd ckanext-d4science_theme
python setup.py develop
pip install -r dev-requirements.txt
-----------------
Running the Tests
-----------------
To run the tests, do::
nosetests --nologcapture --with-pylons=test.ini
To run the tests and produce a coverage report, first make sure you have
coverage installed in your virtualenv (``pip install coverage``) then run::
nosetests --nologcapture --with-pylons=test.ini --with-coverage --cover-package=ckanext.d4science_theme --cover-inclusive --cover-erase --cover-tests
---------------------------------
Registering ckanext-d4science_theme on PyPI
---------------------------------
ckanext-d4science_theme should be availabe on PyPI as
https://pypi.python.org/pypi/ckanext-d4science_theme. If that link doesn't work, then
you can register the project on PyPI for the first time by following these
steps:
1. Create a source distribution of the project::
python setup.py sdist
2. Register the project::
python setup.py register
3. Upload the source distribution to PyPI::
python setup.py sdist upload
4. Tag the first release of the project on GitHub with the version number from
the ``setup.py`` file. For example if the version number in ``setup.py`` is
0.0.1 then do::
git tag 0.0.1
git push --tags
----------------------------------------
Releasing a New Version of ckanext-d4science_theme
----------------------------------------
ckanext-d4science_theme is availabe on PyPI as https://pypi.python.org/pypi/ckanext-d4science_theme.
To publish a new version to PyPI follow these steps:
1. Update the version number in the ``setup.py`` file.
See `PEP 440 <http://legacy.python.org/dev/peps/pep-0440/#public-version-identifiers>`_
for how to choose version numbers.
2. Create a source distribution of the new version::
python setup.py sdist
3. Upload the source distribution to PyPI::
python setup.py sdist upload
4. Tag the new release of the project on GitHub with the version number from
the ``setup.py`` file. For example if the version number in ``setup.py`` is
0.0.2 then do::
git tag 0.0.2
git push --tags

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# this is a namespace package
try:
import pkg_resources
pkg_resources.declare_namespace(__name__)
except ImportError:
import pkgutil
__path__ = pkgutil.extend_path(__path__, __name__)

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# from flask import Flask, g
# from ckan.lib.app_globals import app_globals
# import ckan.plugins.toolkit as toolkit
# app = Flask("d4Science")
# def base_context():
# return {
# 'helpers': toolkit.h,
# }
# @app.context_processor
# def inject_base_context():
# return base_context()
# # Aggiungi main_css al contesto globale di Flask
# # @app.before_request
# # def before_request():
# # g.main_css = app_globals.main_css

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/* =====================================================
The "account masthead" bar across the top of the site
===================================================== */
.account-masthead {
background-color: #ccc;
}
/* The "bubble" containing the number of new notifications. */
.account-masthead .account .notifications a span {
background-color: #9fa0a2;
}
/* The text and icons in the user account info. */
.account-masthead .account ul li a {
color: rgba(255, 255, 255, 0.6);
}
/* The user account info text and icons, when the user's pointer is hovering
over them. */
.account-masthead .account ul li a:hover {
color: rgba(255, 255, 255, 0.7);
/* background-color: black;*/
}
/* ========================================================================
The main masthead bar that contains the site logo, nav links, and search
======================================================================== */
.masthead {
background: #eee url("/bg-noise.png") repeat scroll 0 0;
border-top: 1px solid #555;
padding-top: 5px;
padding-bottom: 15px !important;
border-bottom: 1px solid #999;
/* background-image: url("/bg-pattern.min.svg") !important; */
}
.masthead .navigation .nav-pills li a{
color: #187794;
}
a.logo > img{
margin-bottom: 5px;
}
/* The "navigation pills" in the masthead (the links to Datasets,
Organizations, etc) when the user's pointer hovers over them. */
.masthead .navigation .nav-pills li a:hover {
/* background-color: rgb(48, 48, 48);*/
color: white;
}
/* The "active" navigation pill (for example, when you're on the /dataset page
the "Datasets" link is active). */
.masthead .navigation .nav-pills li.active a {
background-color: #d2d2d5;
}
/* The "box shadow" effect that appears around the search box when it
has the keyboard cursor's focus. */
.masthead input[type="text"]:focus {
-webkit-box-shadow: inset 0px 0px 2px 0px rgba(0, 0, 0, 0.7);
box-shadow: inset 0px 0px 2px 0px rgba(0, 0, 0, 0.7);
}
/* ===========================================
The content in the middle of the front page
=========================================== */
/* Remove the "box shadow" effect around various boxes on the page. */
.box {
box-shadow: none;
}
.hero {
background: #FEFEFE repeat scroll 0 0 !important;
}
/* Remove the borders around the "Welcome to CKAN" and "Search Your Data"
boxes. */
.hero .box {
/*border: none;*/
margin-top: 10px !important;
}
/* Change the colors of the "Search Your Data" box. */
.homepage .module-search .module-content {
color: rgb(68, 68, 68);
background-color: white;
}
/* Change the background color of the "Popular Tags" box. */
.homepage .module-search .tags {
background-color: #fcfcfc;
}
.homepage-title{
font-size: 20px;
font-weight: bold;
color: #202020;
margin-bottom: 20px;
}
/* Change the background color of the "Popular Tags" box. */
.homepage .module-search h3{
color: #444;
}
/* Remove some padding. This makes the bottom edges of the "Welcome to CKAN"
and "Search Your Data" boxes line up. */
.module-content:last-child {
/*padding-bottom: 0px;*/
}
.homepage .module-search {
padding: 0px;
}
/* Add a border line between the top and bottom halves of the front page. */
.homepage [role="main"] {
border-bottom: 1px solid #bbb;
padding: 10px 0;
}
.homepage .stats ul li a b{
font-size: 30px !important;
}
[role="main"], .main {
/* background: #f5f6fa url("/bg-pattern.min.svg") repeat; scroll 0 0;*/
/*background: #fafafa url("/bg-pattern.svg") repeat; scroll 0 0;*/
background: #fdfdfd none repeat scroll 0 0;
min-height: 0px !important;
}
.media-item-homepage {
background-color: white;
border-radius: 3px;
float: left;
margin: 15px 0 0 15px;
overflow: hidden;
padding-left: 10px;
padding-right: 10px;
position: relative;
text-align: center;
width: 150px;
}
.media-heading-homepage {
font-size: 16px;
hyphens: auto;
line-height: 1.3;
margin: 5px 0;
}
.media-grid-homepage {
-moz-border-bottom-colors: none;
-moz-border-left-colors: none;
-moz-border-right-colors: none;
-moz-border-top-colors: none;
/* background: #fbfbfb url("../../../base/images/bg.png") repeat scroll 0 0;
border-color: #dddddd;
border-image: none;
border-style: solid;
border-width: 1px 0;*/
list-style: outside none none;
margin: 0 -10px;
padding-bottom: 15px;
}
.media-grid-homepage::before, .media-grid::after {
content: "";
display: table;
line-height: 0;
}
.media-grid-homepage::after {
clear: both;
}
.background-circle{
padding: 10px 10px;
display: inline-block !important;
-webkit-border-radius: 90px;
-moz-border-radius: 90px;
border-radius: 90px;
background-color: #4679b2;
text-decoration: none !important;
}
.color-white{
color: white !important;
}
.badge-circle {
border-radius: 50% 50% 50% 50% !important;
height: 60px;
text-align: center;
vertical-align: middle;
width: 65px;
background-color: #4679b2;
display: inline-block !important;
padding-top: 5px;
text-decoration: none !important;
}
/* ====================================
The footer at the bottom of the site
==================================== */
.site-footer, body {
background-color: #bbb;
font-family: "Lato","Helvetica Neue",Helvetica,Arial,sans-serif;
font-size: 16px;
}
/* The text in the footer. */
.site-footer,
.site-footer label,
.site-footer small {
color: rgba(255, 255, 255, 0.6);
}
/* The link texts in the footer. */
.site-footer a {
color: rgba(255, 255, 255, 0.6);
}
.site-footer-internal{
min-height: 10px;
padding: 2px 0;
font-size: 12px;
}
.site-footer-internal {
/*background-color: rgba(255, 255, 255, 0.6);*/
text-align: center;
/*display: inline-block;*/
}
.site-footer-internal,
.site-footer-internal label,
.site-footer-internal small {
}
.site-footer-internal a {
display: inline-block;
}
.d4s-hide-text {
background-color: transparent;
border: 0 none;
color: transparent;
font: 0px/0 a;
text-shadow: none;
}
.d4science-footer-logo {
background: url("/gCube_70.png") no-repeat scroll left top rgba(0, 0, 0, 0);
height: 32px;
margin-top: 2px;
text-indent: -900em;
width: 75px;
}
.d4s-ckan-footer-logo {
background: rgba(0, 0, 0, 0) url("/ckan-logo-footer.png") no-repeat scroll left top;
height: 21px;
margin-top: 2px;
text-indent: -900em;
width: 69px;
}
.site-footer-d4science {
font-size: 14px;
color: #f5f5f5;
text-align: center;
height: 25px;
padding-top: 5px;
background-color: #7F7F7F;
}
.site-footer-d4science a {
font-weight: bold;
text-decoration: none;
color: white;
}
/* ====================================
Base elements of the site
==================================== */
div .principaltitle {
color: inherit;
font-family: "Helvetica Neue",Helvetica,Arial,sans-serif;
font-size: 20px;
font-weight: bold;
line-height: 1.2;
margin: 15px 0;
text-rendering: optimizelegibility;
word-break: break-all;
padding-bottom: 10px;
padding-top: 5px;
border-bottom: 1px solid #eee;
}
div .notes {
color: #444444;
font-family: "Helvetica Neue",Helvetica,Arial,sans-serif;
font-size: 14px;
line-height: 1.3;
text-align: justify;
word-break: break-all;
}
div .infotitle {
font-size: 15px;
hyphens: auto;
line-height: 1.3;
word-break: break-all;
font-weight: bold;
}
.toolbar .breadcrumb{
font-size: 16px !important;
}
.box{
border: 0px !important;
}
div .sectiontitle{
color: #9F9F9F;
font-family: "Helvetica Neue",Helvetica,Arial,sans-serif;
font-size: 17px;
font-weight: bold;
margin: 20px 0;
margin-top: 20px;
margin-bottom: 10px;
text-rendering: optimizelegibility;
}
section .well {
background-color: #fdfdfd !important;
border: 1px solid #e3e3e3;
border-radius: 4px;
box-shadow: none !important;
margin-bottom: 20px;
min-height: 20px;
}
.page-heading {
font-size: 18px;
line-height: 1.2;
margin-top: 20px;
margin-bottom: 0px;
}
#dataset-resources .resource-list{
background-color: #fdfdfd !important;
border: 1px solid #e3e3e3;
border-radius: 4px;
box-shadow: none !important;
margin: -1px 0 !important;
}
.wrapper{
border: 1px solid #d0d0d0;
box-shadow: 0 0 0 2px rgba(0, 0, 0, 0.05);
border-radius: 3px
}
.home-popular{
padding-top: 25px;
}
.logo-homepage{
max-height: 60px;
}
.statistics-show{
-webkit-border-radius: 5px;
-moz-border-radius: 5px;
border-radius: 5px;
color: #444444;
text-decoration: none;
}
.d4s-center-cropped{
text-align: center;
background-color: #eee;
border: 1px solid #ddd;
padding-bottom: 10px;
padding-top: 10px;
}
.tag-list {
font-size: 14px;
}
/* ====================================
Acquired Dataset
==================================== */
.label-acquired {
background-color: #55a1ce;
}
.label-owner {
background-color: #e0051e;
}
.divider {
margin-left:10px;
height:auto;
display:inline-block;
}
/* ====================================
List Dataset
==================================== */
/*LEFT
.show_meatadatatype {
color: white;
display: inline-block; // Inline elements with width and height. TL;DR they make the icon buttons stack from left-to-right instead of top-to-bottom
position: relative; // All 'absolute'ly positioned elements are relative to this one
margin-bottom: 20px;
margin-left: 25px;
}
*/
/*RIGHT*/
.show_meatadatatype {
color: white;
display: inline-block;
float: right;
margin-right: 2px;
margin-top: -20px;
position: relative;
}
/* LEFT
* Position the badge within the relatively positioned button
.button__badge {
background-color: #fa3e3e;
border-radius: 2px;
color: white;
padding: 1px 6px;
font-size: 10px;
position: absolute;
top: 0;
right: 0;
}*/
/* RIGTH */
.button__badge {
color: #808080;
padding: 0px 2px;
font-size: 10px;
top: 0;
right: 0;
font-family: sans-serif, times, georgia;
}
/* ====================================
Modal Popup
==================================== */
/* Popup container - can be anything you want */
/* The Modal (background) */
.d4s_modal {
display: none; /* Hidden by default */
position: fixed; /* Stay in place */
z-index: 10001; /* Sit on top (NB. At 1000 there is the zoom in/out of the Map Widget)*/
/*padding-top: 100px;*/ /* Location of the box */
left: 0;
top: 0;
width: 100%; /* Full width */
height: 100%; /* Full height */
overflow: auto; /* Enable scroll if needed */
background-color: rgb(0,0,0); /* Fallback color */
background-color: rgba(0,0,0,0.4); /* Black w/ opacity */
}
/* Modal Content */
.d4s_modal-content {
background-color: #fefefe;
/*margin: auto;*/
padding: 20px;
border: 1px solid #888;
-webkit-border-radius: 5px;
-moz-border-radius: 5px;
border-radius: 5px;
position: absolute;
left: 50%;
margin-left: -225px;
width: 450px;
}
/* The Close Button */
.d4s_close {
color: #aaaaaa;
float: right;
font-size: 28px;
font-weight: bold;
padding-left: 20px;
}
.d4s_close:hover,
.d4s_close:focus {
color: #000;
text-decoration: none;
cursor: pointer;
}
.d4s_div_clickable{
cursor: pointer;
}
/*====================================
D4S POPUP
======================================*/
/* Popup container - can be anything you want */
.popupD4SNoArrow {
position: relative;
cursor: pointer;
-webkit-user-select: none;
-moz-user-select: none;
-ms-user-select: none;
user-select: none;
}
/* The actual popup */
.popupD4SNoArrow .popuptext {
visibility: hidden;
width: 300px;
background-color: #555;
color: #fff;
text-align: center;
border-radius: 6px;
padding: 8px;
position: absolute;
z-index: 1;
bottom: 125%;
left: 50%;
margin-left: -150px;
}
/* Toggle this class - hide and show the popup */
.popupD4SNoArrow .show {
visibility: visible;
-webkit-animation: fadeIn 1s;
animation: fadeIn 1s;
}
/* Popup container - can be anything you want */
.popupD4S {
position: relative;
cursor: pointer;
-webkit-user-select: none;
-moz-user-select: none;
-ms-user-select: none;
user-select: none;
}
/* The actual popup */
.popupD4S .popuptext {
visibility: hidden;
width: 300px;
background-color: #555;
color: #fff;
text-align: center;
border-radius: 6px;
padding: 8px;
position: absolute;
z-index: 1;
bottom: 125%;
left: 50%;
margin-left: -150px;
}
/* Popup arrow */
.popupD4S .popuptext::after {
content: "";
position: absolute;
top: 100%;
left: 50%;
margin-left: -5px;
border-width: 5px;
border-style: solid;
border-color: #555 transparent transparent transparent;
}
/* Toggle this class - hide and show the popup */
.popupD4S .show {
visibility: visible;
-webkit-animation: fadeIn 1s;
animation: fadeIn 1s;
}
/* Add animation (fade in the popup) */
@-webkit-keyframes fadeIn {
from {opacity: 0;}
to {opacity: 1;}
}
@keyframes fadeIn {
from {opacity: 0;}
to {opacity:1 ;}
}
/*====================================
D4S PACKAGE
======================================*/
.graphic-preview-style {
text-align: center;
border-top: 1px dotted #DDD;
padding-top: 10px;
padding-bottom: 0px;
margin-top: 15px;
}
.graphic-preview-style a{
font-size: 13px;
}
.graphic-preview-style img{
max-width: 100% !important;
height: auto;
}
.graphic-preview-style #graphic-title{
font-size: 13px;
}
.nav-item{
word-wrap:break-word;
}
/*====================================
RESOURCE_LIST RESOURCE_ITEM INTO PACKAGE
======================================*/
.required-access {
font-style: italic;
font-weight: bold;
padding: 5px;
}
/*====================================
LINK TO RESOURCES FROM PACKAGE LIST
======================================*/
.dataset-resources li a {
background-color: #187794;
}
.label[data-format="csw"], .label[data-format*="csw"] {
background-color: #e6b800;
}
/*====================================
CSS APPLIED TO Similar GRSF Records
======================================*/
.my-grsf-table{
word-break: break-all;
}
.my-grsf-table tr td{
width: inherit;
}
.my-grsf-table tr td:first-child{
width: 82px !important;
}
/*====================================
CSS APPLIED in base.html
======================================*/
#ckan-page-loading {
display: none;
position: fixed;
top: 50%;
left: 50%;
margin-top: -130px;
margin-left: -130px;
width: 260px;
height: 260px;
z-index: 100000;
background-image: url("/pageloading.gif");
background-repeat: no-repeat;
background-position: center;
}
/*====================================
CSS APPLIED in search_for_location.html
======================================*/
div#search-for-location {
}
div#search-for-location #dataset-map {
position: relative !important;
top: +0px !important;
}
div#search-for-location #dataset-map-container {
height: 300px;
}
div#search-for-location .module-heading {
display: none;
}
div#search-for-extent{
padding-top: 10px;
}
/*====================================
CSS APPLIED in additional_info.html
======================================*/
.qr-code-table {
width: 100%;
}
.qr-code-table td {
width: 85%;
border: 1px solid #e3e3e3;
}
.qr-code-table td:first-child {
padding-left: 10px;
border-right-style: none;
}
.qr-code-table td:last-child {
width: 105px;
text-align: center;
border-left-style: none;
}
/* MAX-WITH APPIED TO QR_CODE */
.qr-code-table img {
max-width: 100px;
height: auto;
}
/*====================================
CSS APPLIED FROM JSON TO HTML TABLE
======================================*/
.json-to-html-table-column{
word-break: break-all;
}
.json-to-html-table-column tr td{
width: inherit;
}
.json-to-html-table-column tr td:first-child{
font-weight: bold;
color: #5a5a5a;
}
/*====================================
CSS APPLIED into custom_form_fields
======================================*/
.disabled-div{
pointer-events: none;
opacity: 0.5;
}
.disabled-div input[type="text"]{
background: #f1f1f1;
}
/*====================================
CSS APPLIED into extra_table.html
======================================*/
.read-more-state {
display: none;
}
.read-more-target {
opacity: 0;
max-height: 0;
font-size: 0;
transition: .25s ease;
}
.read-more-state:checked ~ .read-more-wrap .read-more-target {
opacity: 1;
font-size: inherit;
max-height: 999em;
content: "";
}
.read-more-state ~ .read-more-trigger:before {
content: 'Show more';
}
.read-more-state:checked ~ .read-more-trigger:before {
content: 'Show less';
}
.read-more-state:checked ~ .read-more-wrap::after {
content: "";
}
.read-more-trigger {
cursor: pointer;
display: inline-block;
padding: 0 .5em;
color: #187794;
font-size: .9em;
line-height: 2;
border: 1px solid #ddd;
border-radius: .25em;
font-weight: normal;
}
.read-more-trigger::after {
content: "";
}
.read-more-wrap {
margin-bottom: 2px;
}
.read-more-wrap::after{
content: " ...";
}

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/* =====================================================
JavaScript used by CKAN plugin: 'd4science_theme'
Created by Francesco Mangiacrapa ISTI-CNR Pisa, Italy
===================================================== */
//old script starts
CKAN_D4S_Breadcrumb_Manager = {
breadcrumbShow : function (show) {
var breadcrumb = document.getElementById('ckan-breadcrumb');
console.log('breadcrumb is '+breadcrumb)
if(breadcrumb){
if(show){
breadcrumb.style.display = 'block';
this.organizationTreeShow(true);
} else{
breadcrumb.style.display = 'none';
this.organizationTreeShow(false);
}
}
//var elements = document.getElementsByTagName('a');
//for(var i = 0, len = elements.length; i < len; i++) {
// elements[i].onclick = function () {
// //alert("You clicked an external link to: " + this.href);
// //window.parent.add_hide_breadcrumb_to_dom(false);
// this.add_hide_breadcrumb_to_dom(false);
// }
//}
},
organizationTreeShow : function (show) {
var trees = document.getElementsByClassName("hierarchy-tree-top");
if (trees){
for (i = 0; i < trees.length; i++) {
if(show){
trees[i].style.display = 'block';
} else{
trees[i].style.display = 'none';
}
}
}
},
checkBreadcrumbShow : function () {
var showBdc = this.getSessionStorageItem("showbreadcrumb")
//console.log("showBdc is: "+showBdc)
if(showBdc != undefined && showBdc=="false"){
console.log("Show breadcrumb false");
this.breadcrumbShow(false);
}else{
console.log("Show breadcrumb true");
this.breadcrumbShow(true);
}
},
setSessionStorageItem : function (item_key, item_value) {
// Check browser support
if (typeof(Storage) !== "undefined") {
// Store
sessionStorage.setItem(item_key, item_value);
return true;
} else {
console.log("Sorry, your browser does not support Web Storage...");
return false;
}
},
getSessionStorageItem : function (item_key) {
// Check browser support
if (typeof(Storage) !== "undefined") {
// Store
return sessionStorage.getItem(item_key);
} else {
console.log("Sorry, your browser does not support Web Storage...");
return undefined;
}
}
}
CKAN_D4S_Functions_Util = {
getPosition : function(canvas, event){
var x = new Number();
var y = new Number();
try {
if (event.clientX != undefined && event.clientY != undefined)
{
x = event.clientX;
y = event.clientY;
}
else // Firefox method to get the position
{
x = event.clientX + document.body.scrollLeft +
document.documentElement.scrollLeft;
y = event.clientY + document.body.scrollTop +
document.documentElement.scrollTop;
}
x -= canvas.offsetLeft;
y -= canvas.offsetTop;
}catch (err) {
//silent error
}
return '{"posX": "'+x+'", "posY": "'+y+'"}';
},
// When the user clicks on div, open the popup
showPopupD4S : function(event, my_div, my_popup_left_position) {
var popup = document.getElementById(my_div);
var clickPosition = this.getPosition(my_div, event)
var myPosition = JSON.parse(clickPosition);
this.closePopups(my_div);
// When the user clicks anywhere outside of the modal, close it
/*window.onclick = function(event) {
if (event.target != popup) {
popup.style.display = "none";
}
}*/
popup.classList.toggle("show");
if(my_popup_left_position){
popup.style.left = my_popup_left_position;
}
else if (myPosition.posX){
popup.style.left = myPosition.posX + "px";
}
},
closePopups : function ($target) {
var popups = document.getElementsByClassName('popuptext');
for (i = 0; i < popups.length; i++) {
if (popups[i].getAttribute('id') != $target) {
popups[i].classList.remove('show');
}
}
},
checkURL : function (url) {
//console.log('checking url: '+url)
var regex = new RegExp('^(http:\/\/www\.|https:\/\/www\.|http:\/\/|https:\/\/|www\.|ftp:\/\/)+[^ "]+$');
if (regex.test(url)) {
return true;
}
return false;
}
}
CKAN_D4S_HTMLMessage_Util = {
postHeightToPortlet : function (selectedProduct, product) {
var h = document.body.scrollHeight + "px";
var p = "";
var msg = "";
//WORK AROUND IF TWO MESSAGES ARE SENT FROM A PAGE OF A PRODUCT
//THE MESSAGE WITH 'NULL' PRODUCT IS SKIPPED
//console.log("window.location.pathname? "+window.location.pathname);
var pathArray = window.location.pathname.split('/');
var productContext = "dataset";
if(pathArray.length>1){
//console.log("pathArray is: "+pathArray);
var secondLevelLocation = pathArray[1]; //it is the second level location
//console.log("secondLevelLocation is: "+secondLevelLocation);
//console.log("h is: "+h);
if(secondLevelLocation == productContext){ //is it product context?
if(product !== 'undefined' && product !== null){
p = product;
//console.log("product selected is: "+p);
}else{
//console.log("product is null or undefined, passing only height");
msg = "{\"height\": \""+h+"\"}";
//window.postMessage(msg,'*');
this.postMessageToParentWindow(msg);
return;
}
}
}
//msg = "{'height': '"+h+"', 'product': '"+p+"'}";
msg = "{\"height\": \""+h+"\", \"product\": \""+p+"\"}";
//window.postMessage(msg,'*');
//console.log("posting message in the window: "+msg);
this.postMessageToParentWindow(msg);
},
postMessageToParentWindow : function (msg) {
//window.postMessage(msg,'*');
//console.log("posting message in the window: "+msg);
if(window.parent!=null){
console.log("posting message in the parent window: "+msg);
window.parent.postMessage(msg,'*');
}
return;
}
}
CKAN_D4S_JSON_Util = {
//ADDED by Francesco Mangiacrapa
appendHTMLToElement : function(containerID, elementHTML){
var divContainer = document.getElementById(containerID);
divContainer.innerHTML = "";
divContainer.appendChild(elementHTML);
},
//ADDED by Francesco Mangiacrapa
jsonToHTML : function(containerID, cssClassToTable) {
try
{
var jsonTxt = document.getElementById(containerID).innerHTML;
var jsonObj = JSON.parse(jsonTxt);
//console.log(jsonObj.length)
if(jsonObj.length==undefined)
jsonObj = [jsonObj]
//console.log(jsonObj.length)
// EXTRACT VALUE FOR HTML HEADER.
var col = [];
for (var i = 0; i < jsonObj.length; i++) {
for (var key in jsonObj[i]) {
//console.log('key json' +key)
if (col.indexOf(key) === -1) {
col.push(key);
}
}
}
// CREATE DYNAMIC TABLE.
var table = document.createElement("table");
var addDefaultCss = "json-to-html-table-column";
if(cssClassToTable){
addDefaultCss = cssClassToTable;
}
try{
table.classList.add(addDefaultCss);
}catch(e){
console.log('invalid css add', e);
}
// ADD JSON DATA TO THE TABLE AS ROWS.
for (var i = 0; i < col.length; i++) {
tr = table.insertRow(-1);
var firstCell = tr.insertCell(-1);
//firstCell.style.cssText="font-weight: bold; text-align: center; vertical-align: middle;";
firstCell.innerHTML = col[i];
for (var j = 0; j < jsonObj.length; j++) {
var tabCell = tr.insertCell(-1);
var theValue = jsonObj[j][col[i]];
/* console.log(theValue + ' is url? '+isUrl);*/
if(CKAN_D4S_Functions_Util.checkURL(theValue)){
theValue = '<a target="_blank" href='+theValue+'>'+theValue+'</a>';
}
tabCell.innerHTML = theValue;
}
}
// FINALLY ADD THE NEWLY CREATED TABLE WITH JSON DATA TO A CONTAINER.
this.appendHTMLToElement(containerID, table);
}
catch(e){
console.log('invalid json', e);
}
}
}
//Task #8032
window.addEventListener("message",
function (e) {
var curr_loc = window.location.toString()
var orgin = e.origin.toString()
if(curr_loc.startsWith(orgin)){
//alert("ignoring message from myself");
return;
}
//console.log("origin: "+e.data)
if(e.data == null)
return;
var pMess = JSON.parse(e.data)
//console.log(pMess.explore_vres_landing_page)
window.linktogateway = pMess.explore_vres_landing_page;
},false);
//old script ends

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d4science-js:
filter: rjsmin
output: ckanext-d4science_theme/ckanext/d4science_theme/assets/js/d4science_scripts.js
contents:
- js/d4science_scripts.js
extra:
preload:
- base/main
d4science-css:
filter: cssrewrite
output: ckanext-d4science_theme/ckanext/d4science_theme/assets/css/d4science_theme.css
contents:
- css/d4science_theme.css

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#The __init__.py files are required to make Python
#treat the directories as containing packages; this is done to prevent directories with a common name, such as string, from unintentionally hiding valid modules that occur later on the module search path.
#See: https://docs.python.org/3/tutorial/modules.html#packages

83
compose/2.10/src/ckanext-d4science_theme/ckanext/d4science_theme/controllers/home.py Normal file
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import logging
# from ckan.controllers.home import HomeController
import ckan.plugins as p
from ckan.common import _, g, c
from collections import OrderedDict
import ckan.lib.search as search
import ckan.model as model
import ckan.logic as logic
import ckan.lib.maintain as maintain
import ckan.lib.base as base
import ckan.lib.helpers as h
from flask import render_template
# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
class d4SHomeController():
#Overriding controllers.HomeController.index method
def index(self):
try:
# package search
context = {'model': model, 'session': model.Session,'user': c.user, 'auth_user_obj': c.userobj}
facets = OrderedDict()
default_facet_titles = {
'organization': _('Organizations'),
'groups': _('Groups'),
'types':_('Types'),
'tags': _('Tags'),
'res_format': _('Formats'),
'license_id': _('Licenses'),
}
for facet in g.facets:
if facet in default_facet_titles:
facets[facet] = default_facet_titles[facet]
else:
facets[facet] = facet
# Facet titles
for plugin in p.PluginImplementations(p.IFacets):
facets = plugin.dataset_facets(facets, 'dataset')
c.facet_titles = facets
data_dict = {
'q': '*:*',
'facet.field': list(facets.keys()),
'rows': 4,
'start': 0,
'sort': 'views_recent desc',
'fq': 'capacity:"public"'
}
query = logic.get_action('package_search')(context, data_dict)
c.search_facets = query['search_facets']
c.package_count = query['count']
c.datasets = query['results']
#print "c.search_facets: "
#print " ".join(c.search_facets)
except search.SearchError:
c.package_count = 0
if c.userobj and not c.userobj.email:
url = h.url_for(controller='user', action='edit')
msg = _('Please <a href="%s">update your profile</a>'
' and add your email address. ') % url + \
_('%s uses your email address'
' if you need to reset your password.') \
% g.site_title
h.flash_notice(msg, allow_html=True)
#return base.render('home/index.html', cache_force=True)
#ckan 2.10 :
return render_template('home/index.html')

134
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# encoding: utf-8
import re
#import ckan.controllers.group as group
import ckan.plugins as plugins
import logging
import datetime
from urllib.parse import urlencode
import ckan.plugins.toolkit as toolkit
import ckan.lib.base as base
import ckan.lib.helpers as h
import ckan.lib.maintain as maintain
import ckan.lib.navl.dictization_functions as dict_fns
import ckan.logic as logic
import ckan.lib.search as search
import ckan.model as model
import ckan.authz as authz
import ckan.lib.plugins
import ckan.plugins as plugins
from ckan.common import c, request, _
'''
Created by Francesco Mangiacrapa, see: #8964
'''
class OrganizationVREController(plugins.toolkit.DefaultOrganizationForm): #changed for 2.10 : GroupController -> defaultOrganizationForm
''' The organization controller is for Organizations, which are implemented
as Groups with is_organization=True and group_type='organization'. It works
the same as the group controller apart from:
* templates and logic action/auth functions are sometimes customized
(switched using _replace_group_org)
* 'bulk_process' action only works for organizations
Nearly all the code for both is in the GroupController (for historical
reasons).
'''
group_types = ['organization']
def _guess_group_type(self, expecting_name=False):
return 'organization'
def _replace_group_org(self, string):
''' substitute organization for group if this is an org'''
return re.sub('^group', 'organization', string)
def _update_facet_titles(self, facets, group_type):
for plugin in plugins.PluginImplementations(plugins.IFacets):
facets = plugin.organization_facets(
facets, group_type, None)
def index(self):
group_type = self._guess_group_type()
page = h.get_page_number(request.args) or 1
items_per_page = 21
context = {'model': model, 'session': model.Session,
'user': c.user, 'for_view': True,
'with_private': False}
q = c.q = request.args.get('q', '')
sort_by = c.sort_by_selected = request.args.get('sort')
try:
logic.check_access('site_read', context)
logic.check_access('group_list', context)
except ckan.plugins.toolkit.NotAuthorized:
abort(403, _('Not authorized to see this page'))
# pass user info to context as needed to view private datasets of
# orgs correctly
if c.userobj:
context['user_id'] = c.userobj.id
context['user_is_admin'] = c.userobj.sysadmin
data_dict_global_results = {
'all_fields': False,
'q': q,
'sort': sort_by,
'type': group_type or 'group',
}
global_results = toolkit.get_action('group_list')(context,
data_dict_global_results)
data_dict_page_results = {
'all_fields': True,
'q': q,
'sort': sort_by,
'type': group_type or 'group',
'limit': items_per_page,
'offset': items_per_page * (page - 1),
}
page_results = toolkit.get_action('group_list')(context,
data_dict_page_results)
c.page = h.Page(
collection=global_results,
page=page,
url=h.pager_url,
items_per_page=items_per_page,
)
c.page.items = page_results
return base.render('organization_vre/index.html',
extra_vars={'group_type': group_type})
def read(self, id, limit=20):
group_type = self._ensure_controller_matches_group_type(
id.split('@')[0])
context = {'model': model, 'session': model.Session,
'user': c.user,
'schema': self._db_to_form_schema(group_type=group_type),
'for_view': True}
data_dict = {'id': id, 'type': group_type}
# unicode format (decoded from utf8)
c.q = request.args.get('q', '')
try:
# Do not query for the group datasets when dictizing, as they will
# be ignored and get requested on the controller anyway
data_dict['include_datasets'] = False
c.group_dict = toolkit.get_action('group_show')(context, data_dict)
c.group = context['group']
except (NotFound, NotAuthorized, ckan.logic.NotFound):
abort(404, _('Group not found'))
self._read(id, limit, group_type)
return base.render('organization_vre/read.html',
extra_vars={'group_type': group_type})

96
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import logging
import ckan.plugins as p
from ckan.common import _, g, c
import ckan.lib.search as search
import ckan.model as model
import ckan.logic as logic
import ckan.lib.maintain as maintain
import ckan.lib.base as base
import ckan.lib.helpers as h
from urllib.parse import urlencode
import ckan.lib.base as base
import ckan.lib.helpers as h
import ckan.lib.maintain as maintain
import ckan.lib.navl.dictization_functions as dict_fns
import ckan.logic as logic
import ckan.lib.search as search
import ckan.model as model
import ckan.authz as authz
import ckan.lib.plugins
import ckan.plugins as plugins
from ckan.common import c, g, request, _
from collections import OrderedDict
from flask import render_template
# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
class d4STypeController():
#Overriding controllers.HomeController.index method
def index(self):
try:
# package search
context = {'model': model, 'session': model.Session,'user': c.user, 'auth_user_obj': c.userobj}
facets = OrderedDict()
default_facet_titles = {
'organization': _('Organizations'),
'groups': _('Groups'),
'types':_('Types'),
'tags': _('Tags'),
'res_format': _('Formats'),
'license_id': _('Licenses'),
}
for facet in g.facets:
if facet in default_facet_titles:
facets[facet] = default_facet_titles[facet]
else:
facets[facet] = facet
# Facet titles
for plugin in p.PluginImplementations(p.IFacets):
facets = plugin.dataset_facets(facets, 'dataset')
c.facet_titles = facets
data_dict = {
'q': '*:*',
'facet.field': list(facets.keys()),
'rows': 4,
'start': 0,
'sort': 'views_recent desc',
'fq': 'capacity:"public"'
}
query = logic.get_action('package_search')(context, data_dict)
c.search_facets = query['search_facets']
c.package_count = query['count']
c.datasets = query['results']
#print "c.search_facets: "
#print " ".join(c.search_facets)
except search.SearchError:
c.package_count = 0
if c.userobj and not c.userobj.email:
url = h.url_for(controller='user', action='edit')
msg = _('Please <a href="%s">update your profile</a>'
' and add your email address. ') % url + \
_('%s uses your email address'
' if you need to reset your password.') \
% g.site_title
h.flash_notice(msg, allow_html=True)
# return base.render('type/index.html', cache_force=True)
return render_template('type/index.html')

0
compose/2.10/src/ckanext-d4science_theme/ckanext/d4science_theme/d4sdiscovery/__init__.py Normal file
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import datetime
import logging
import os
import tempfile
import csv
from .icproxycontroller import NAMESPACE_ID_LABEL
log = logging.getLogger(__name__)
CATALINA_HOME = 'CATALINA_HOME'
temp_dir = None
namespaces_dir = None
NAMESPACES_DIR_NAME = "namespaces_for_catalogue"
NAMESPACES_CACHE_FILENAME = "Namespaces_Catalogue_Categories.csv"
# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
# D4S_Cache_Controller
class D4S_Cache_Controller():
namespaces_cache_path = None
__scheduler = None
def __init__(self):
""" Virtually private constructor. """
log.debug("__init__ D4S_Cache_Controller")
self._check_cache()
def _check_cache(self):
if self.namespaces_cache_path is None:
self.init_temp_dir()
self.namespaces_cache_path = os.path.join(namespaces_dir, NAMESPACES_CACHE_FILENAME)
log.info("The namespaces cache is located at: %s" % self.namespaces_cache_path)
if not os.path.exists(self.namespaces_cache_path):
log.info("File does not exists creating it")
try:
with open(self.namespaces_cache_path, mode='w') as namespaces_file:
csv.writer(namespaces_file, delimiter=',', quotechar='"', quoting=csv.QUOTE_MINIMAL)
log.info("Cache created at %s" % self.namespaces_cache_path)
except Exception as e:
print(e)
''' Write the list of dictionary with namespaces'''
def write_namespaces(self, namespace_list_of_dict):
# Insert Data
with open(self.namespaces_cache_path, 'w') as namespaces_file:
writer = csv.writer(namespaces_file, delimiter=',', quotechar='"', quoting=csv.QUOTE_MINIMAL)
writer.writerow([NAMESPACE_ID_LABEL, 'name', 'title', 'description'])
for namespace_dict in namespace_list_of_dict:
#print("namespace %s" % namespace_dict)
writer.writerow([namespace_dict[NAMESPACE_ID_LABEL], namespace_dict['name'], namespace_dict['title'], namespace_dict['description']])
log.info("Inserted %d namespaces in the Cache" % len(namespace_list_of_dict))
'''Returns the list of dictionary with namespaces'''
def read_namespaces(self):
# Read Data
namespace_list_of_dict = []
try:
with open(self.namespaces_cache_path, 'r') as namespaces_file:
reader = csv.DictReader(namespaces_file)
for row in reader:
#print("read namespace %s" % row)
namespace_list_of_dict.append(dict(row))
log.debug("from Cache returning namespace_list_of_dict %s: " % namespace_list_of_dict)
log.info("from Cache read namespace_list_of_dict with %d item/s " % len(namespace_list_of_dict))
return namespace_list_of_dict
except Exception as e:
print(e)
log.info("no namespace in the Cache returning empty list of dict")
return namespace_list_of_dict
@property
def get_namespaces_cache_path(self):
return self.namespaces_cache_path
@classmethod
def init_temp_dir(cls):
global temp_dir
global NAMESPACES_DIR_NAME
global namespaces_dir
try:
temp_dir = str(os.environ[CATALINA_HOME])
temp_dir = os.path.join(temp_dir, "temp")
except KeyError as error:
log.error("No environment variable for: %s" % CATALINA_HOME)
if temp_dir is None:
temp_dir = tempfile.gettempdir() # using system tmp dir
log.debug("Temp dir is: %s" % temp_dir)
namespaces_dir = os.path.join(temp_dir, NAMESPACES_DIR_NAME)
if not os.path.exists(namespaces_dir):
os.makedirs(namespaces_dir)

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# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
import logging
log = logging.getLogger(__name__)
class D4S_Extras():
def __init__(self, category_dict={}, extras=[]):
self._category = category_dict
self._extras = extras
def append_extra(self, k, v):
#print ("self._extras: %s" %self._extras)
if k is not None:
self._extras.append({k:v})
@property
def category(self):
return self._category
@property
def extras(self):
return self._extras
def __repr__(self):
return 'category: %s'%self._category+' ' \
'extras: %s'%self._extras

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# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
#OrderedDict([(u'@id', u'extra_information'), (u'name', u'Extra Information'), (u'title', u'Extras'), (u'description', u'This section is about Extra(s)')]), u'contact': OrderedDict([(u'@id', u'contact'), (u'name', u'Contact'), (u'title', u'Contact Title'), (u'description', u'This section is about Contact(s)')]), u'developer_information': OrderedDict([(u'@id', u'developer_information'), (u'name', u'Developer'), (u'title', u'Developer Information'), (u'description', u'This section is about Developer(s)')])}
import logging
log = logging.getLogger(__name__)
class D4S_Namespaces():
def __init__(self, id=None, name=None, title=None, description=None):
self._id = id
self._name = name
self._title = title
self._description = description
@property
def id(self):
return self._id
@property
def name(self):
return self._name
@property
def title(self):
return self._title
@property
def description(self):
return self._description
def __repr__(self):
return '{id: %s'%self.id+', ' \
'name: %s'%self.name+ ', ' \
'title: %s'%self.title+ ', ' \
'description: %s'%self.description+ '}'

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import logging
import time
from .d4s_cache_controller import D4S_Cache_Controller
from .icproxycontroller import D4S_IS_DiscoveryCatalogueNamespaces
from threading import Event, Thread
CATEGORY = 'category'
NOCATEOGORY = 'nocategory'
log = logging.getLogger(__name__)
cancel_future_calls = None
# Refreshing time for namespaces cache in secs.
NAMESPACES_CACHE_REFRESHING_TIME = 60 * 60
# Funtion to call repeatedly another function
def call_repeatedly(interval, func, *args):
log.info("call_repeatedly called on func '{}' with interval {} sec".format(func.__name__, interval))
stopped = Event()
def loop():
while not stopped.wait(interval): # the first call is in `interval` secs
func(*args)
th = Thread(name='daemon_caching_namespaces', target=loop)
th.setDaemon(True)
th.start()
return stopped.set
def reload_namespaces_from_IS(urlICProxy, resourceID, gcubeToken):
log.info("_reload_namespaces_from_IS called")
try:
discovery_ctg_namespaces = D4S_IS_DiscoveryCatalogueNamespaces(urlICProxy, resourceID, gcubeToken)
namespaces_list_of_dict = discovery_ctg_namespaces.getNamespacesDictFromResource()
if namespaces_list_of_dict is not None and len(namespaces_list_of_dict) > 0:
log.debug("namespaces read from IS are: %s" % namespaces_list_of_dict)
D4S_Cache_Controller().write_namespaces(namespaces_list_of_dict)
else:
log.info("namespaces list read from IS is empty. Skipping caching update")
except Exception as e:
print("Error occurred on reading namespaces from IS and refilling the cache!")
print(e)
# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
# D4S_IS_DiscoveryCatalogueNamespacesController is used to discovery namespaces for Catalogue Categories (implemented as a Singleton)
# @param: urlICProxy is the URI of IC proxy rest-full service provided by IS
# @param: resourceID is the resource ID of the Generic Resource: "Namespaces Catalogue Categories"
# @param: gcubeToken the gcube token used to contact the IC proxy
class D4S_Namespaces_Controller():
__instance = None
@staticmethod
def getInstance():
""" Static access method. """
if D4S_Namespaces_Controller.__instance is None:
D4S_Namespaces_Controller()
return D4S_Namespaces_Controller.__instance
def __init__(self):
""" Virtually private constructor. """
log.debug("__init__ D4S_Namespaces_Controller")
if D4S_Namespaces_Controller.__instance is not None:
raise Exception("This class is a singleton!")
else:
D4S_Namespaces_Controller.__instance = self
self._d4s_cache_controller = D4S_Cache_Controller()
self._urlICProxy = None
self._resourceID = None
self._gcubeToken = None
def load_namespaces(self, urlICProxy, resourceID, gcubeToken):
log.debug("readNamespaces called")
self._urlICProxy = urlICProxy
self._resourceID = resourceID
self._gcubeToken = gcubeToken
return self._check_namespaces()
def _read_namespaces(self):
return self._d4s_cache_controller.read_namespaces()
def _check_namespaces(self):
log.debug("_check_namespaces called")
if self._d4s_cache_controller is None:
self._d4s_cache_controller = D4S_Cache_Controller()
namespace_list = self._read_namespaces()
# when the Cache is empty
if namespace_list is None or not namespace_list:
# reading namespaces from IS and filling the DB
log.info("The Cache is empty. Reading the namespace from IS and filling the Cache")
reload_namespaces_from_IS(self._urlICProxy, self._resourceID, self._gcubeToken)
# reloading the namespaces from the cache
namespace_list = self._read_namespaces()
# starting Thread daemon for refreshing the namespaces Cache
global cancel_future_calls
if cancel_future_calls is None:
cancel_future_calls = call_repeatedly(NAMESPACES_CACHE_REFRESHING_TIME, reload_namespaces_from_IS,
self._urlICProxy,
self._resourceID,
self._gcubeToken)
return namespace_list
def get_dict_ctg_namespaces(self):
log.debug("get_dict_ctg_namespaces called")
namespace_list_of_dict = self._check_namespaces()
return self.convert_namespaces_to_d4s_namespacedict(namespace_list_of_dict)
# Private method
@staticmethod
def convert_namespaces_to_d4s_namespacedict(namespace_list_of_dict):
log.debug("convert_namespaces_to_d4s_namespacedict called on %s" % namespace_list_of_dict)
return D4S_IS_DiscoveryCatalogueNamespaces.to_namespaces_dict_index_for_id(namespace_list_of_dict)

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import logging
import collections
from .d4s_extras import D4S_Extras
CATEGORY = 'category'
NOCATEOGORY = 'nocategory'
log = logging.getLogger(__name__)
# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
# D4S_Namespaces_Extra_Util is used to get the extra fields indexed for D4Science namespaces
# @param: namespace_dict is the namespace dict of D4Science namespaces (defined in the Generic Resource: "Namespaces Catalogue Categories")
# @param: extras is the dictionary of extra fields for a certain item
class D4S_Namespaces_Extra_Util():
def get_extras_indexed_for_namespaces(self, namespace_dict, extras):
extras_for_categories = collections.OrderedDict()
# ADDING ALL EXTRAS WITH NAMESPACE
for namespaceid in list(namespace_dict.keys()):
dict_extras = None
nms = namespaceid + ":"
#has_namespace_ref = None
for key, value in extras:
k = key
v = value
# print "key: " + k
# print "value: " + v
if k.startswith(nms):
if namespaceid not in extras_for_categories:
extras_for_categories[namespaceid] = collections.OrderedDict()
dict_extras = extras_for_categories[namespaceid]
log.debug("dict_extras %s "%dict_extras)
if (dict_extras is None) or (not dict_extras):
dict_extras = D4S_Extras(namespace_dict.get(namespaceid), [])
log.debug("dict_extras after init %s " % dict_extras)
#print ("dict_extras after init %s " % dict_extras)
log.debug("replacing namespace into key %s " % k +" with empty string")
nms = namespaceid + ":"
k = k.replace(nms, "")
dict_extras.append_extra(k, v)
extras_for_categories[namespaceid] = dict_extras
log.debug("adding d4s_extra: %s " % dict_extras+ " - to namespace id: %s" %namespaceid)
#has_namespace_ref = True
#break
#ADDING ALL EXTRAS WITHOUT NAMESPACE
for key, value in extras:
k = key
v = value
has_namespace_ref = None
for namespaceid in list(namespace_dict.keys()):
nms = namespaceid + ":"
#IF KEY NOT STARTING WITH NAMESPACE
if k.startswith(nms):
has_namespace_ref = True
log.debug("key: %s " % k + " - have namespace: %s" % nms)
break
if has_namespace_ref is None:
log.debug("key: %s " % k + " - have not namespace")
if NOCATEOGORY not in extras_for_categories:
extras_for_categories[NOCATEOGORY] = collections.OrderedDict()
dict_extras_no_cat = extras_for_categories[NOCATEOGORY]
#print ("dict_extras_no_cat %s " % dict_extras_no_cat)
if (dict_extras_no_cat is None) or (not dict_extras_no_cat):
dict_extras_no_cat = D4S_Extras(NOCATEOGORY, [])
#print ("adding key: %s "%k+" - value: %s"%v)
log.debug("NOCATEOGORY adding key: %s " % k + " - value: %s" % v)
dict_extras_no_cat.append_extra(k, v)
log.debug("dict_extras_no_cat %s " % dict_extras_no_cat)
extras_for_categories[NOCATEOGORY] = dict_extras_no_cat
log.debug("extras_for_categories NOCATEOGORY %s " % extras_for_categories)
return extras_for_categories

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import logging
import urllib.request, urllib.error, urllib.parse
from lxml import etree
import xmltodict
import collections
from .d4s_namespaces import D4S_Namespaces
XPATH_NAMESPACES = "/Resource/Profile/Body/namespaces"
gcubeTokenParam = "gcube-token"
NAMESPACE_ID_LABEL = '@id'
log = logging.getLogger(__name__)
# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
def getResponseBody(uri):
req = urllib.request.Request(uri)
try:
resp = urllib.request.urlopen(req, timeout=20)
except urllib.error.HTTPError as e:
log.error("Error on contacting URI: %s" % uri)
log.error("HTTPError: %d" % e.code)
return None
except urllib.error.URLError as e:
# Not an HTTP-specific error (e.g. connection refused)
log.error("URLError - Input URI: %s " % uri + " is not valid!!")
return None
else:
# 200
body = resp.read()
return body
# D4S_IS_DiscoveryCatalogueNamespaces is used to discovery namespaces for Catalogue Categories.
# @param: urlICProxy is the URI of IC proxy rest-full service provided by IS
# @param: resourceID is the resource ID of the Generic Resource: "Namespaces Catalogue Categories"
# @param: gcubeToken the gcube token used to contact the IC proxy
class D4S_IS_DiscoveryCatalogueNamespaces():
def __init__(self, urlICProxy, resourceID, gcubeToken):
self.urlICProxy = urlICProxy
self.resourceID = resourceID
self.gcubeToken = gcubeToken
def getNamespacesDictFromResource(self):
doc = {}
namespace_list = []
try:
# print("proxy: "+self.urlICProxy)
# print("resourceID: " + self.resourceID)
# print("gcubeTokenParam: " + gcubeTokenParam)
# print("gcubeToken: " + self.gcubeToken)
uri = self.urlICProxy + "/" + self.resourceID + "?" + gcubeTokenParam + "=" + self.gcubeToken
log.info("Contacting URL: %s" % uri)
theResource = getResponseBody(uri)
log.debug("Resource returned %s " % theResource)
theResourceXML = etree.XML(theResource)
theNamespaces = theResourceXML.xpath(XPATH_NAMESPACES)
log.debug("The body %s" % etree.tostring(theNamespaces[0]))
if theNamespaces is not None and theNamespaces[0] is not None:
bodyToString = etree.tostring(theNamespaces[0])
doc = xmltodict.parse(bodyToString)
else:
log.warn("No Namespace for Catalogue Categories found, returning None")
except Exception as inst:
log.error("Error on getting catalogue namespaces: " + str(inst))
log.info("Returning empty list of namespaces")
return namespace_list
log.debug("IS namespaces resource to dict is: %s" % doc)
if ('namespaces' in doc):
# log.debug('Namespaces obj %s:' % doc['namespaces'])
namespaces = doc['namespaces']
if doc is not None and 'namespace' in namespaces:
namespace_list = namespaces['namespace']
log.info("Loaded %d namespaces from IS resource" % len(namespace_list))
return namespace_list
@staticmethod
def to_namespaces_dict_index_for_id(namespace_list):
namespace_dict = collections.OrderedDict()
log.debug("namespaces to dict: %s" % namespace_list)
try:
if namespace_list is not None and len(namespace_list) > 0:
for namespace in namespace_list:
try:
if NAMESPACE_ID_LABEL in namespace:
namespace_dict[namespace[NAMESPACE_ID_LABEL]] = D4S_Namespaces(
namespace[NAMESPACE_ID_LABEL],
namespace['name'],
namespace['title'],
namespace['description'])
except Exception as inst:
log.error("Error on converting catalogue namespaces: " + str(inst))
except Exception as inst:
log.error("Error on checking namespace_list: " + str(inst))
# print "namespace_dict to Nam: %s"%namespace_dict
return namespace_dict

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/* =====================================================
JavaScript used by CKAN plugin: 'd4science_theme'
Created by Francesco Mangiacrapa ISTI-CNR Pisa, Italy
===================================================== */
CKAN_D4S_Breadcrumb_Manager = {
breadcrumbShow : function (show) {
var breadcrumb = document.getElementById('ckan-breadcrumb');
console.log('breadcrumb is '+breadcrumb)
if(breadcrumb){
if(show){
breadcrumb.style.display = 'block';
this.organizationTreeShow(true);
} else{
breadcrumb.style.display = 'none';
this.organizationTreeShow(false);
}
}
//var elements = document.getElementsByTagName('a');
//for(var i = 0, len = elements.length; i < len; i++) {
// elements[i].onclick = function () {
// //alert("You clicked an external link to: " + this.href);
// //window.parent.add_hide_breadcrumb_to_dom(false);
// this.add_hide_breadcrumb_to_dom(false);
// }
//}
},
organizationTreeShow : function (show) {
var trees = document.getElementsByClassName("hierarchy-tree-top");
if (trees){
for (i = 0; i < trees.length; i++) {
if(show){
trees[i].style.display = 'block';
} else{
trees[i].style.display = 'none';
}
}
}
},
checkBreadcrumbShow : function () {
var showBdc = this.getSessionStorageItem("showbreadcrumb")
//console.log("showBdc is: "+showBdc)
if(showBdc != undefined && showBdc=="false"){
console.log("Show breadcrumb false");
this.breadcrumbShow(false);
}else{
console.log("Show breadcrumb true");
this.breadcrumbShow(true);
}
},
setSessionStorageItem : function (item_key, item_value) {
// Check browser support
if (typeof(Storage) !== "undefined") {
// Store
sessionStorage.setItem(item_key, item_value);
return true;
} else {
console.log("Sorry, your browser does not support Web Storage...");
return false;
}
},
getSessionStorageItem : function (item_key) {
// Check browser support
if (typeof(Storage) !== "undefined") {
// Store
return sessionStorage.getItem(item_key);
} else {
console.log("Sorry, your browser does not support Web Storage...");
return undefined;
}
}
}
CKAN_D4S_Functions_Util = {
getPosition : function(canvas, event){
var x = new Number();
var y = new Number();
try {
if (event.clientX != undefined && event.clientY != undefined)
{
x = event.clientX;
y = event.clientY;
}
else // Firefox method to get the position
{
x = event.clientX + document.body.scrollLeft +
document.documentElement.scrollLeft;
y = event.clientY + document.body.scrollTop +
document.documentElement.scrollTop;
}
x -= canvas.offsetLeft;
y -= canvas.offsetTop;
}catch (err) {
//silent error
}
return '{"posX": "'+x+'", "posY": "'+y+'"}';
},
// When the user clicks on div, open the popup
showPopupD4S : function(event, my_div, my_popup_left_position) {
var popup = document.getElementById(my_div);
var clickPosition = this.getPosition(my_div, event)
var myPosition = JSON.parse(clickPosition);
this.closePopups(my_div);
// When the user clicks anywhere outside of the modal, close it
/*window.onclick = function(event) {
if (event.target != popup) {
popup.style.display = "none";
}
}*/
popup.classList.toggle("show");
if(my_popup_left_position){
popup.style.left = my_popup_left_position;
}
else if (myPosition.posX){
popup.style.left = myPosition.posX + "px";
}
},
closePopups : function ($target) {
var popups = document.getElementsByClassName('popuptext');
for (i = 0; i < popups.length; i++) {
if (popups[i].getAttribute('id') != $target) {
popups[i].classList.remove('show');
}
}
},
checkURL : function (url) {
//console.log('checking url: '+url)
var regex = new RegExp('^(http:\/\/www\.|https:\/\/www\.|http:\/\/|https:\/\/|www\.|ftp:\/\/)+[^ "]+$');
if (regex.test(url)) {
return true;
}
return false;
}
}
CKAN_D4S_HTMLMessage_Util = {
postHeightToPortlet : function (selectedProduct, product) {
var h = document.body.scrollHeight + "px";
var p = "";
var msg = "";
//WORK AROUND IF TWO MESSAGES ARE SENT FROM A PAGE OF A PRODUCT
//THE MESSAGE WITH 'NULL' PRODUCT IS SKIPPED
//console.log("window.location.pathname? "+window.location.pathname);
var pathArray = window.location.pathname.split('/');
var productContext = "dataset";
if(pathArray.length>1){
//console.log("pathArray is: "+pathArray);
var secondLevelLocation = pathArray[1]; //it is the second level location
//console.log("secondLevelLocation is: "+secondLevelLocation);
//console.log("h is: "+h);
if(secondLevelLocation == productContext){ //is it product context?
if(product !== 'undefined' && product !== null){
p = product;
//console.log("product selected is: "+p);
}else{
//console.log("product is null or undefined, passing only height");
msg = "{\"height\": \""+h+"\"}";
//window.postMessage(msg,'*');
this.postMessageToParentWindow(msg);
return;
}
}
}
//msg = "{'height': '"+h+"', 'product': '"+p+"'}";
msg = "{\"height\": \""+h+"\", \"product\": \""+p+"\"}";
//window.postMessage(msg,'*');
//console.log("posting message in the window: "+msg);
this.postMessageToParentWindow(msg);
},
postMessageToParentWindow : function (msg) {
//window.postMessage(msg,'*');
//console.log("posting message in the window: "+msg);
if(window.parent!=null){
console.log("posting message in the parent window: "+msg);
window.parent.postMessage(msg,'*');
}
return;
}
}
CKAN_D4S_JSON_Util = {
//ADDED by Francesco Mangiacrapa
appendHTMLToElement : function(containerID, elementHTML){
var divContainer = document.getElementById(containerID);
divContainer.innerHTML = "";
divContainer.appendChild(elementHTML);
},
//ADDED by Francesco Mangiacrapa
jsonToHTML : function(containerID, cssClassToTable) {
try
{
var jsonTxt = document.getElementById(containerID).innerHTML;
var jsonObj = JSON.parse(jsonTxt);
//console.log(jsonObj.length)
if(jsonObj.length==undefined)
jsonObj = [jsonObj]
//console.log(jsonObj.length)
// EXTRACT VALUE FOR HTML HEADER.
var col = [];
for (var i = 0; i < jsonObj.length; i++) {
for (var key in jsonObj[i]) {
//console.log('key json' +key)
if (col.indexOf(key) === -1) {
col.push(key);
}
}
}
// CREATE DYNAMIC TABLE.
var table = document.createElement("table");
var addDefaultCss = "json-to-html-table-column";
if(cssClassToTable){
addDefaultCss = cssClassToTable;
}
try{
table.classList.add(addDefaultCss);
}catch(e){
console.log('invalid css add', e);
}
// ADD JSON DATA TO THE TABLE AS ROWS.
for (var i = 0; i < col.length; i++) {
tr = table.insertRow(-1);
var firstCell = tr.insertCell(-1);
//firstCell.style.cssText="font-weight: bold; text-align: center; vertical-align: middle;";
firstCell.innerHTML = col[i];
for (var j = 0; j < jsonObj.length; j++) {
var tabCell = tr.insertCell(-1);
var theValue = jsonObj[j][col[i]];
/* console.log(theValue + ' is url? '+isUrl);*/
if(CKAN_D4S_Functions_Util.checkURL(theValue)){
theValue = '<a target="_blank" href='+theValue+'>'+theValue+'</a>';
}
tabCell.innerHTML = theValue;
}
}
// FINALLY ADD THE NEWLY CREATED TABLE WITH JSON DATA TO A CONTAINER.
this.appendHTMLToElement(containerID, table);
}
catch(e){
console.log('invalid json', e);
}
}
}
//Task #8032
window.addEventListener("message",
function (e) {
var curr_loc = window.location.toString()
var orgin = e.origin.toString()
if(curr_loc.startsWith(orgin)){
//alert("ignoring message from myself");
return;
}
//console.log("origin: "+e.data)
if(e.data == null)
return;
var pMess = JSON.parse(e.data)
//console.log(pMess.explore_vres_landing_page)
window.linktogateway = pMess.explore_vres_landing_page;
},false);

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/* =====================================================
The "account masthead" bar across the top of the site
===================================================== */
.account-masthead {
background-color: #ccc;
}
/* The "bubble" containing the number of new notifications. */
.account-masthead .account .notifications a span {
background-color: #9fa0a2;
}
/* The text and icons in the user account info. */
.account-masthead .account ul li a {
color: rgba(255, 255, 255, 0.6);
}
/* The user account info text and icons, when the user's pointer is hovering
over them. */
.account-masthead .account ul li a:hover {
color: rgba(255, 255, 255, 0.7);
/* background-color: black;*/
}
/* ========================================================================
The main masthead bar that contains the site logo, nav links, and search
======================================================================== */
.masthead {
background: #eee url("/bg-noise.png") repeat scroll 0 0;
border-top: 1px solid #555;
padding-top: 5px;
padding-bottom: 15px !important;
border-bottom: 1px solid #999;
/* background-image: url("/bg-pattern.min.svg") !important; */
}
.masthead .navigation .nav-pills li a{
color: #187794;
}
a.logo > img{
margin-bottom: 5px;
}
/* The "navigation pills" in the masthead (the links to Datasets,
Organizations, etc) when the user's pointer hovers over them. */
.masthead .navigation .nav-pills li a:hover {
/* background-color: rgb(48, 48, 48);*/
color: white;
}
/* The "active" navigation pill (for example, when you're on the /dataset page
the "Datasets" link is active). */
.masthead .navigation .nav-pills li.active a {
background-color: #d2d2d5;
}
/* The "box shadow" effect that appears around the search box when it
has the keyboard cursor's focus. */
.masthead input[type="text"]:focus {
-webkit-box-shadow: inset 0px 0px 2px 0px rgba(0, 0, 0, 0.7);
box-shadow: inset 0px 0px 2px 0px rgba(0, 0, 0, 0.7);
}
/* ===========================================
The content in the middle of the front page
=========================================== */
/* Remove the "box shadow" effect around various boxes on the page. */
.box {
box-shadow: none;
}
.hero {
background: #FEFEFE repeat scroll 0 0 !important;
}
/* Remove the borders around the "Welcome to CKAN" and "Search Your Data"
boxes. */
.hero .box {
/*border: none;*/
margin-top: 10px !important;
}
/* Change the colors of the "Search Your Data" box. */
.homepage .module-search .module-content {
color: rgb(68, 68, 68);
background-color: white;
}
/* Change the background color of the "Popular Tags" box. */
.homepage .module-search .tags {
background-color: #fcfcfc;
}
.homepage-title{
font-size: 20px;
font-weight: bold;
color: #202020;
margin-bottom: 20px;
}
/* Change the background color of the "Popular Tags" box. */
.homepage .module-search h3{
color: #444;
}
/* Remove some padding. This makes the bottom edges of the "Welcome to CKAN"
and "Search Your Data" boxes line up. */
.module-content:last-child {
/*padding-bottom: 0px;*/
}
.homepage .module-search {
padding: 0px;
}
/* Add a border line between the top and bottom halves of the front page. */
.homepage [role="main"] {
border-bottom: 1px solid #bbb;
padding: 10px 0;
}
.homepage .stats ul li a b{
font-size: 30px !important;
}
[role="main"], .main {
/* background: #f5f6fa url("/bg-pattern.min.svg") repeat; scroll 0 0;*/
/*background: #fafafa url("/bg-pattern.svg") repeat; scroll 0 0;*/
background: #fdfdfd none repeat scroll 0 0;
min-height: 0px !important;
}
.media-item-homepage {
background-color: white;
border-radius: 3px;
float: left;
margin: 15px 0 0 15px;
overflow: hidden;
padding-left: 10px;
padding-right: 10px;
position: relative;
text-align: center;
width: 150px;
}
.media-heading-homepage {
font-size: 16px;
hyphens: auto;
line-height: 1.3;
margin: 5px 0;
}
.media-grid-homepage {
-moz-border-bottom-colors: none;
-moz-border-left-colors: none;
-moz-border-right-colors: none;
-moz-border-top-colors: none;
/* background: #fbfbfb url("../../../base/images/bg.png") repeat scroll 0 0;
border-color: #dddddd;
border-image: none;
border-style: solid;
border-width: 1px 0;*/
list-style: outside none none;
margin: 0 -10px;
padding-bottom: 15px;
}
.media-grid-homepage::before, .media-grid::after {
content: "";
display: table;
line-height: 0;
}
.media-grid-homepage::after {
clear: both;
}
.background-circle{
padding: 10px 10px;
display: inline-block !important;
-webkit-border-radius: 90px;
-moz-border-radius: 90px;
border-radius: 90px;
background-color: #4679b2;
text-decoration: none !important;
}
.color-white{
color: white !important;
}
.badge-circle {
border-radius: 50% 50% 50% 50% !important;
height: 60px;
text-align: center;
vertical-align: middle;
width: 65px;
background-color: #4679b2;
display: inline-block !important;
padding-top: 5px;
text-decoration: none !important;
}
/* ====================================
The footer at the bottom of the site
==================================== */
.site-footer, body {
background-color: #bbb;
font-family: "Lato","Helvetica Neue",Helvetica,Arial,sans-serif;
font-size: 16px;
}
/* The text in the footer. */
.site-footer,
.site-footer label,
.site-footer small {
color: rgba(255, 255, 255, 0.6);
}
/* The link texts in the footer. */
.site-footer a {
color: rgba(255, 255, 255, 0.6);
}
.site-footer-internal{
min-height: 10px;
padding: 2px 0;
font-size: 12px;
}
.site-footer-internal {
/*background-color: rgba(255, 255, 255, 0.6);*/
text-align: center;
/*display: inline-block;*/
}
.site-footer-internal,
.site-footer-internal label,
.site-footer-internal small {
}
.site-footer-internal a {
display: inline-block;
}
.d4s-hide-text {
background-color: transparent;
border: 0 none;
color: transparent;
font: 0px/0 a;
text-shadow: none;
}
.d4science-footer-logo {
background: url("/gCube_70.png") no-repeat scroll left top rgba(0, 0, 0, 0);
height: 32px;
margin-top: 2px;
text-indent: -900em;
width: 75px;
}
.d4s-ckan-footer-logo {
background: rgba(0, 0, 0, 0) url("/ckan-logo-footer.png") no-repeat scroll left top;
height: 21px;
margin-top: 2px;
text-indent: -900em;
width: 69px;
}
.site-footer-d4science {
font-size: 14px;
color: #f5f5f5;
text-align: center;
height: 25px;
padding-top: 5px;
background-color: #7F7F7F;
}
.site-footer-d4science a {
font-weight: bold;
text-decoration: none;
color: white;
}
/* ====================================
Base elements of the site
==================================== */
div .principaltitle {
color: inherit;
font-family: "Helvetica Neue",Helvetica,Arial,sans-serif;
font-size: 20px;
font-weight: bold;
line-height: 1.2;
margin: 15px 0;
text-rendering: optimizelegibility;
word-break: break-all;
padding-bottom: 10px;
padding-top: 5px;
border-bottom: 1px solid #eee;
}
div .notes {
color: #444444;
font-family: "Helvetica Neue",Helvetica,Arial,sans-serif;
font-size: 14px;
line-height: 1.3;
text-align: justify;
word-break: break-all;
}
div .infotitle {
font-size: 15px;
hyphens: auto;
line-height: 1.3;
word-break: break-all;
font-weight: bold;
}
.toolbar .breadcrumb{
font-size: 16px !important;
}
.box{
border: 0px !important;
}
div .sectiontitle{
color: #9F9F9F;
font-family: "Helvetica Neue",Helvetica,Arial,sans-serif;
font-size: 17px;
font-weight: bold;
margin: 20px 0;
margin-top: 20px;
margin-bottom: 10px;
text-rendering: optimizelegibility;
}
section .well {
background-color: #fdfdfd !important;
border: 1px solid #e3e3e3;
border-radius: 4px;
box-shadow: none !important;
margin-bottom: 20px;
min-height: 20px;
}
.page-heading {
font-size: 18px;
line-height: 1.2;
margin-top: 20px;
margin-bottom: 0px;
}
#dataset-resources .resource-list{
background-color: #fdfdfd !important;
border: 1px solid #e3e3e3;
border-radius: 4px;
box-shadow: none !important;
margin: -1px 0 !important;
}
.wrapper{
border: 1px solid #d0d0d0;
box-shadow: 0 0 0 2px rgba(0, 0, 0, 0.05);
border-radius: 3px
}
.home-popular{
padding-top: 25px;
}
.logo-homepage{
max-height: 60px;
}
.statistics-show{
-webkit-border-radius: 5px;
-moz-border-radius: 5px;
border-radius: 5px;
color: #444444;
text-decoration: none;
}
.d4s-center-cropped{
text-align: center;
background-color: #eee;
border: 1px solid #ddd;
padding-bottom: 10px;
padding-top: 10px;
}
.tag-list {
font-size: 14px;
}
/* ====================================
Acquired Dataset
==================================== */
.label-acquired {
background-color: #55a1ce;
}
.label-owner {
background-color: #e0051e;
}
.divider {
margin-left:10px;
height:auto;
display:inline-block;
}
/* ====================================
List Dataset
==================================== */
/*LEFT
.show_meatadatatype {
color: white;
display: inline-block; // Inline elements with width and height. TL;DR they make the icon buttons stack from left-to-right instead of top-to-bottom
position: relative; // All 'absolute'ly positioned elements are relative to this one
margin-bottom: 20px;
margin-left: 25px;
}
*/
/*RIGHT*/
.show_meatadatatype {
color: white;
display: inline-block;
float: right;
margin-right: 2px;
margin-top: -20px;
position: relative;
}
/* LEFT
* Position the badge within the relatively positioned button
.button__badge {
background-color: #fa3e3e;
border-radius: 2px;
color: white;
padding: 1px 6px;
font-size: 10px;
position: absolute;
top: 0;
right: 0;
}*/
/* RIGTH */
.button__badge {
color: #808080;
padding: 0px 2px;
font-size: 10px;
top: 0;
right: 0;
font-family: sans-serif, times, georgia;
}
/* ====================================
Modal Popup
==================================== */
/* Popup container - can be anything you want */
/* The Modal (background) */
.d4s_modal {
display: none; /* Hidden by default */
position: fixed; /* Stay in place */
z-index: 10001; /* Sit on top (NB. At 1000 there is the zoom in/out of the Map Widget)*/
/*padding-top: 100px;*/ /* Location of the box */
left: 0;
top: 0;
width: 100%; /* Full width */
height: 100%; /* Full height */
overflow: auto; /* Enable scroll if needed */
background-color: rgb(0,0,0); /* Fallback color */
background-color: rgba(0,0,0,0.4); /* Black w/ opacity */
}
/* Modal Content */
.d4s_modal-content {
background-color: #fefefe;
/*margin: auto;*/
padding: 20px;
border: 1px solid #888;
-webkit-border-radius: 5px;
-moz-border-radius: 5px;
border-radius: 5px;
position: absolute;
left: 50%;
margin-left: -225px;
width: 450px;
}
/* The Close Button */
.d4s_close {
color: #aaaaaa;
float: right;
font-size: 28px;
font-weight: bold;
padding-left: 20px;
}
.d4s_close:hover,
.d4s_close:focus {
color: #000;
text-decoration: none;
cursor: pointer;
}
.d4s_div_clickable{
cursor: pointer;
}
/*====================================
D4S POPUP
======================================*/
/* Popup container - can be anything you want */
.popupD4SNoArrow {
position: relative;
cursor: pointer;
-webkit-user-select: none;
-moz-user-select: none;
-ms-user-select: none;
user-select: none;
}
/* The actual popup */
.popupD4SNoArrow .popuptext {
visibility: hidden;
width: 300px;
background-color: #555;
color: #fff;
text-align: center;
border-radius: 6px;
padding: 8px;
position: absolute;
z-index: 1;
bottom: 125%;
left: 50%;
margin-left: -150px;
}
/* Toggle this class - hide and show the popup */
.popupD4SNoArrow .show {
visibility: visible;
-webkit-animation: fadeIn 1s;
animation: fadeIn 1s;
}
/* Popup container - can be anything you want */
.popupD4S {
position: relative;
cursor: pointer;
-webkit-user-select: none;
-moz-user-select: none;
-ms-user-select: none;
user-select: none;
}
/* The actual popup */
.popupD4S .popuptext {
visibility: hidden;
width: 300px;
background-color: #555;
color: #fff;
text-align: center;
border-radius: 6px;
padding: 8px;
position: absolute;
z-index: 1;
bottom: 125%;
left: 50%;
margin-left: -150px;
}
/* Popup arrow */
.popupD4S .popuptext::after {
content: "";
position: absolute;
top: 100%;
left: 50%;
margin-left: -5px;
border-width: 5px;
border-style: solid;
border-color: #555 transparent transparent transparent;
}
/* Toggle this class - hide and show the popup */
.popupD4S .show {
visibility: visible;
-webkit-animation: fadeIn 1s;
animation: fadeIn 1s;
}
/* Add animation (fade in the popup) */
@-webkit-keyframes fadeIn {
from {opacity: 0;}
to {opacity: 1;}
}
@keyframes fadeIn {
from {opacity: 0;}
to {opacity:1 ;}
}
/*====================================
D4S PACKAGE
======================================*/
.graphic-preview-style {
text-align: center;
border-top: 1px dotted #DDD;
padding-top: 10px;
padding-bottom: 0px;
margin-top: 15px;
}
.graphic-preview-style a{
font-size: 13px;
}
.graphic-preview-style img{
max-width: 100% !important;
height: auto;
}
.graphic-preview-style #graphic-title{
font-size: 13px;
}
.nav-item{
word-wrap:break-word;
}
/*====================================
RESOURCE_LIST RESOURCE_ITEM INTO PACKAGE
======================================*/
.required-access {
font-style: italic;
font-weight: bold;
padding: 5px;
}
/*====================================
LINK TO RESOURCES FROM PACKAGE LIST
======================================*/
.dataset-resources li a {
background-color: #187794;
}
.label[data-format="csw"], .label[data-format*="csw"] {
background-color: #e6b800;
}
/*====================================
CSS APPLIED TO Similar GRSF Records
======================================*/
.my-grsf-table{
word-break: break-all;
}
.my-grsf-table tr td{
width: inherit;
}
.my-grsf-table tr td:first-child{
width: 82px !important;
}
/*====================================
CSS APPLIED in base.html
======================================*/
#ckan-page-loading {
display: none;
position: fixed;
top: 50%;
left: 50%;
margin-top: -130px;
margin-left: -130px;
width: 260px;
height: 260px;
z-index: 100000;
background-image: url("/pageloading.gif");
background-repeat: no-repeat;
background-position: center;
}
/*====================================
CSS APPLIED in search_for_location.html
======================================*/
div#search-for-location {
}
div#search-for-location #dataset-map {
position: relative !important;
top: +0px !important;
}
div#search-for-location #dataset-map-container {
height: 300px;
}
div#search-for-location .module-heading {
display: none;
}
div#search-for-extent{
padding-top: 10px;
}
/*====================================
CSS APPLIED in additional_info.html
======================================*/
.qr-code-table {
width: 100%;
}
.qr-code-table td {
width: 85%;
border: 1px solid #e3e3e3;
}
.qr-code-table td:first-child {
padding-left: 10px;
border-right-style: none;
}
.qr-code-table td:last-child {
width: 105px;
text-align: center;
border-left-style: none;
}
/* MAX-WITH APPIED TO QR_CODE */
.qr-code-table img {
max-width: 100px;
height: auto;
}
/*====================================
CSS APPLIED FROM JSON TO HTML TABLE
======================================*/
.json-to-html-table-column{
word-break: break-all;
}
.json-to-html-table-column tr td{
width: inherit;
}
.json-to-html-table-column tr td:first-child{
font-weight: bold;
color: #5a5a5a;
}
/*====================================
CSS APPLIED into custom_form_fields
======================================*/
.disabled-div{
pointer-events: none;
opacity: 0.5;
}
.disabled-div input[type="text"]{
background: #f1f1f1;
}
/*====================================
CSS APPLIED into extra_table.html
======================================*/
.read-more-state {
display: none;
}
.read-more-target {
opacity: 0;
max-height: 0;
font-size: 0;
transition: .25s ease;
}
.read-more-state:checked ~ .read-more-wrap .read-more-target {
opacity: 1;
font-size: inherit;
max-height: 999em;
content: "";
}
.read-more-state ~ .read-more-trigger:before {
content: 'Show more';
}
.read-more-state:checked ~ .read-more-trigger:before {
content: 'Show less';
}
.read-more-state:checked ~ .read-more-wrap::after {
content: "";
}
.read-more-trigger {
cursor: pointer;
display: inline-block;
padding: 0 .5em;
color: #187794;
font-size: .9em;
line-height: 2;
border: 1px solid #ddd;
border-radius: .25em;
font-weight: normal;
}
.read-more-trigger::after {
content: "";
}
.read-more-wrap {
margin-bottom: 2px;
}
.read-more-wrap::after{
content: " ...";
}

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from multiprocessing import context
import ckan.authz as authz
import ckan.model as model
from webhelpers2.html import literal
from webhelpers2.text import truncate
import ckan.lib.helpers as h
import ckan.logic as logic
from ckan.common import config
from ckanext.d4science_theme.d4sdiscovery.d4s_namespaces_controller import D4S_Namespaces_Controller
from ckanext.d4science_theme.d4sdiscovery.d4s_namespaces_extras_util import D4S_Namespaces_Extra_Util
from ckanext.d4science_theme.qrcodelink.generate_qrcode import D4S_QrCode
import urllib.request, urllib.error, urllib.parse
from ckan.common import (
_, g, c, request, session
)
import random
from operator import itemgetter
from logging import getLogger
import base64
import sys, os, re
import configparser
import collections
import ckan.plugins.toolkit as tk
import ckan.logic as logic
log = getLogger(__name__)
systemtype_field = 'systemtypefield'
systemtype_field_default_value = 'system:type'
ic_proxy_url_field = 'ic_proxy_url'
ic_proxy_url_field_default_value = "https://registry.d4science.org/icproxy/gcube/service"
application_token_field = 'application_token'
namespaces_generic_resource_id_default_value = "23d827cd-ba8e-4d8c-9ab4-6303bdb7d1db"
namespaces_gr_id_fieldname = "namespaces_generic_resource_id"
namespaceseparator_field = 'namespace_separator'
namespaceseparator_field_default_value = ':'
systemtype_rgb_colors = ['#c0392b ', '#585858', '#04407C', '#9b59b6', '#2ecc71', '#16a085', '#7f8c8d ', '#2ecc71',
'#FA8072', '#00FFFF', '#C76611', '#f39c12', '#800000']
systemtype_field_colors = 'systemtype_field_colors'
systemtype_cms_fields_placeholders = {'prefix': 'system:cm_', 'item_status': 'system:cm_item_status'}
NOCATEOGORY = 'nocategory'
TRANSLATE_OF_ = 'translate_of_'
ctg_namespace_ctrl = None
# def get_tag_list()
# return logic.get_action('tag_list')
# ADDED BY FRANCESCO.MANGIACRAPA, related to Task #5196
def get_user_role_for_group_or_org(group_id, user_name):
''' Returns the user's role for the group. (Ignores privileges that cascade
in a group hierarchy.)'''
return authz.users_role_for_group_or_org(group_id, user_name)
# ADDED BY FRANCESCO.MANGIACRAPA, related to breadcrumb for Group
def get_parents_for_group(group_name_or_id):
''' Returns the user's role for the group. (Ignores privileges that cascade
in a group hierarchy.)'''
group = model.Group.get(group_name_or_id)
if group:
return model.Group.get_parent_group_hierarchy(group)
else:
return None
# ADDED BY FRANCESCO.MANGIACRAPA
def get_header_param(parameter_name, default=None):
''' This function allows templates to access header string parameters
from the request. '''
return request.headers.get(parameter_name, default)
# ADDED BY FRANCESCO.MANGIACRAPA
def get_request_param(parameter_name, default=None):
''' This function allows templates to access query string parameters
from the request. '''
return request.args.get(parameter_name, default)
# ADDED BY FRANCESCO.MANGIACRAPA
def get_cookie_value(cookie_name, default=None):
''' This function allows templates to access cookie by cookie_name parameter
from the request. '''
value = request.cookies.get(cookie_name)
if value is None:
print(('cookie: ' + cookie_name + ', has value None'))
else:
print(('cookie: ' + cookie_name + ', has value ' + value))
return value
# Updated BY FRANCESCO.MANGIACRAPA, added allow_html
def markdown_extract_html(text, extract_length=190, allow_html=False):
''' Returns the plain text representation of markdown encoded text. That
is the texted without any html tags. If extract_length is 0 then it
will not be truncated.'''
if not text:
return ''
if allow_html:
plain = h.markdown(text.strip())
else:
plain = h.RE_MD_HTML_TAGS.sub('', h.markdown(text))
if not extract_length or len(plain) < extract_length:
return literal(plain)
return literal(str(truncate(plain, length=extract_length, indicator='...', whole_word=True)))
def get_systemtype_field_dict_from_session():
'''Return the value of 'ckan.d4science_theme.metadatatypefield'
read from production.ini'''
systemtype_fieldname = session.get(systemtype_field)
if systemtype_fieldname is None:
log.info(systemtype_field + " not found in session, loading from config")
else:
log.debug(systemtype_field + " found in session having value: %s" % systemtype_fieldname)
return systemtype_fieldname
systemtype_fieldname = config.get('ckan.d4science_theme.' + systemtype_field)
if systemtype_fieldname is None:
log.info(
systemtype_field + " field does not exist in production.ini, returning default value %s" % systemtype_field_default_value)
systemtype_fieldname = systemtype_field_default_value
separator = get_namespace_separator_from_session()
log.debug("Replacing %s" % separator + " with empty string for key %s" % systemtype_field)
systemtype_fieldname_name = systemtype_fieldname.replace(separator, "")
purgedfieldname = purge_namespace_to_fieldname(systemtype_fieldname)
log.debug("Setting %s" % systemtype_fieldname + " in session for key %s" % systemtype_field)
session[systemtype_field] = {'id': systemtype_fieldname, 'name': systemtype_fieldname_name,
'title': purgedfieldname}
session.save()
return session[systemtype_field]
def get_d4s_namespace_controller():
'''Instance the D4S_Namespaces_Controller and check that the namespaces are not empty reading it from IS and/or using a Caching system.
The ic-proxy-url is built by reading the configurations from production.ini'''
d4s_extras_controller = D4S_Namespaces_Controller.getInstance()
global ctg_namespace_ctrl
if ctg_namespace_ctrl is not None:
log.info("ctg_namespace_ctrl with configurations is NOT None")
the_namespaces = d4s_extras_controller.load_namespaces(ctg_namespace_ctrl['ic_proxy_url'],
ctg_namespace_ctrl['resource_id'],
ctg_namespace_ctrl['application_token'])
log.debug("the_namespaces are %s" % the_namespaces)
if the_namespaces is None or len(the_namespaces) == 0:
log.info("D4S_Namespaces_Controller obj with none or empty namespaces, going to read them")
else:
log.info("d4s_namespaces_controller found and the namespaces property is not empty: %s" % d4s_extras_controller)
return d4s_extras_controller
else:
log.info("ctg_namespace_ctrl with configurations is None, instancing it")
ic_proxy_url_value = config.get('ckan.d4science_theme.' + ic_proxy_url_field)
if ic_proxy_url_value is None:
log.info(
"ckan.d4science_theme." + ic_proxy_url_field + " field does not exist in production.ini, returning default value %s" % ic_proxy_url_field_default_value)
ic_proxy_url_value = ic_proxy_url_field_default_value
application_token_fieldname = config.get('ckan.d4science_theme.' + application_token_field)
if application_token_fieldname is None:
log.error("ckan.d4science_theme." + application_token_field + " field does not exist in production.ini!!!")
application_token_fieldname = None
namespaces_gr_id_fieldname_value = config.get('ckan.d4science_theme.' + namespaces_gr_id_fieldname)
if namespaces_gr_id_fieldname_value is None:
log.error("ckan.d4science_theme." + application_token_field + " field does not exist in production.ini!!!")
namespaces_gr_id_fieldname_value = namespaces_generic_resource_id_default_value
# filling the ctg_namespace_ctrl with IS configurations to perform the query for loading the namespaces from IS
ctg_namespace_ctrl = {'ic_proxy_url': ic_proxy_url_value,
'application_token': application_token_fieldname,
'resource_id': namespaces_gr_id_fieldname_value}
d4s_extras_controller.load_namespaces(ctg_namespace_ctrl['ic_proxy_url'], ctg_namespace_ctrl['resource_id'],
ctg_namespace_ctrl['application_token'])
return d4s_extras_controller
def get_extras_indexed_for_namespaces(extras):
namespace_dict = get_namespaces_dict()
# log.info("my_namespace_dict %s" % namespace_dict)
my_extra = get_extras(extras)
# log.info("my_extra is %s" % my_extra)
# d4s_extras_controller = D4S_Namespaces_Controller.getInstance()
# extras_indexed_for_categories = d4s_extras_controller.get_extras_indexed_for_namespaces(namespace_dict, my_extra)
extras_indexed_for_categories = D4S_Namespaces_Extra_Util().get_extras_indexed_for_namespaces(namespace_dict,
my_extra)
return extras_indexed_for_categories
def get_namespaces_dict():
d4s_extras_controller = get_d4s_namespace_controller()
if d4s_extras_controller is not None:
return d4s_extras_controller.get_dict_ctg_namespaces()
else:
log.info("local_extras_controller is null, returning empty dictionary for namespaces")
return {}
def get_extra_for_category(extras_indexed_for_categories, key_category):
if key_category in extras_indexed_for_categories:
catalogue_namespace = extras_indexed_for_categories[key_category]
return catalogue_namespace.extras
return []
def get_systemtype_value_from_extras(package, extras=None):
'''Returns the value of metadata fied read from key 'metadatatype'
stored into extra fields if it exists, 'No Type' otherwise'''
systemtype_dict = get_systemtype_field_dict_from_session()
no_type = 'No Type'
if extras is None:
return no_type
for extra in extras:
k, v = extra['key'], extra['value']
log.debug("key is %s" % k)
log.debug("value is %s" % v)
if k == str(systemtype_dict['id']):
return v
return no_type
def get_namespace_separator_from_session():
'''Returns the character used to separate namespace from fieldname'''
separator = session.get(namespaceseparator_field)
if separator is None:
log.info(namespaceseparator_field + " not found in session, loading from config")
else:
log.debug(namespaceseparator_field + " found in session: %s" % separator)
return separator
namespace_sep = config.get('ckan.d4science_theme.' + namespaceseparator_field)
if namespace_sep is None:
log.info(
namespaceseparator_field + " field does not exist in production.ini, returning default value %s" % namespaceseparator_field_default_value)
namespace_sep = namespaceseparator_field_default_value
log.debug("Setting %s" % namespace_sep + " in session for key %s" % namespaceseparator_field)
session[namespaceseparator_field] = namespace_sep
return namespace_sep
def get_extras(package_extras, auto_clean=False, subs=None, exclude=None):
''' Used for outputting package extras
:param package_extras: the package extras
:type package_extras: dict
:param auto_clean: If true capitalize and replace -_ with spaces
:type auto_clean: bool
:param subs: substitutes to use instead of given keys
:type subs: dict {'key': 'replacement'}
:param exclude: keys to exclude
:type exclude: list of strings
'''
# If exclude is not supplied use values defined in the config
if not exclude:
exclude = g.package_hide_extras
output = []
for extra in package_extras:
if extra.get('state') == 'deleted':
continue
k, v = extra['key'], extra['value']
if k in exclude:
continue
if subs and k in subs:
k = subs[k]
elif auto_clean:
k = k.replace('_', ' ').replace('-', ' ').title()
if isinstance(v, (list, tuple)):
v = ", ".join(map(str, v))
output.append((k, v))
return output
def purge_namespace_to_fieldname(fieldname):
separator = get_namespace_separator_from_session()
if fieldname is None:
return ""
if separator not in fieldname:
return fieldname
end = fieldname.index(separator) + 1
max_l = len(fieldname)
if end < max_l:
return fieldname[end:max_l]
return fieldname
def purge_namespace_to_string(facet):
if not c.search_facets or \
not c.search_facets.get(facet) or \
not c.search_facets.get(facet).get('items'):
return ""
facet_name = c.search_facets.get(facet)
print(("facet_name " + str(facet_name)))
end = str(facet_name).index(":")
if end <= len(facet_name):
return facet_name[:end]
return facet_name
def count_facet_items_dict(facet, limit=None, exclude_active=False):
if not c.search_facets or \
not c.search_facets.get(facet) or \
not c.search_facets.get(facet).get('items'):
return 0
facets = []
for facet_item in c.search_facets.get(facet)['items']:
if not len(facet_item['name'].strip()):
continue
if not (facet, facet_item['name']) in list(request.args.items()):
facets.append(dict(active=False, **facet_item))
elif not exclude_active:
facets.append(dict(active=True, **facet_item))
# for count,
# print "facets " + str(facets)
total = len(facets)
log.debug("total facet: %s" % facet + " are %d" % total)
return total
def random_color():
rgbl = [255, 0, 0]
random.shuffle(rgbl)
return tuple(rgbl)
def check_url(the_url):
try:
urllib.request.urlopen(the_url)
return True
except urllib.error.HTTPError as e:
# print(e.code)
return False
except urllib.error.URLError as e:
# print(e.args)
return False
except Exception as error:
# print(error)
return False
def get_color_for_type(systemtype_field_value):
'''Return a color assigned to a system type'''
systemtypecolors = session.get(systemtype_field_colors)
# log.info("color: getting color for type: %s" %systemtype_field_value)
if systemtypecolors is None:
log.info("color: " + systemtype_field_colors + " not found in session, creating new one")
systemtypecolors = {}
session[systemtype_field_colors] = systemtypecolors
else:
log.debug("color: " + systemtype_field_colors + " found in session having value: %s" % systemtypecolors)
e_color = systemtypecolors.get(systemtype_field_value)
if e_color is None:
usedcolorsLen = len(systemtypecolors)
colorsLen = len(systemtype_rgb_colors)
index = usedcolorsLen if usedcolorsLen < colorsLen else random.randint(0, colorsLen - 1)
e_color = systemtype_rgb_colors[index]
# log.debug("color: adding color %s" %e_color +" index is: "+str(index))
systemtypecolors[systemtype_field_value] = e_color
session[systemtype_field_colors] = systemtypecolors
session.save()
# log.debug("color: returning color %s" %e_color +" for type: "+systemtype_field_value)
return e_color
def ordered_dictionary(list_to_be_sorted, property='name', ordering="asc"):
# print ("dict %s" %list_to_be_sorted)
ord = False if ordering == "asc" else True
if list_to_be_sorted:
return sorted(list_to_be_sorted, key=itemgetter(property), reverse=ord)
return list_to_be_sorted
def qrcode_for_url(url):
if url:
try:
qr_code = D4S_QrCode(url)
image_path = qr_code.get_qrcode_path()
with open(image_path, "rb") as image_file:
return base64.b64encode(image_file.read())
return ""
except Exception as error:
log.error("Error on getting qrcode for url: " + url + "error: %s" % error)
return ""
def get_list_of_organizations(limit=10, sort='packages'):
to_browse_organizations = []
try:
data = {}
if sort:
data['sort'] = sort
data['limit'] = limit
data['all_fields'] = True
ordered_organizations = []
ordered_organizations = logic.get_action('organization_list')({}, data)
for organization in ordered_organizations:
try:
to_browse_obj = {}
if not organization['name']:
continue
to_browse_obj['name'] = organization['name']
if 'package_count' in organization:
to_browse_obj['package_count'] = organization['package_count']
if 'display_name' in organization:
to_browse_obj['display_name'] = organization['display_name']
image_url = get_url_to_icon_for_ckan_entity(organization['name'], 'organization', False)
# Using ICON as first option
if image_url:
to_browse_obj['url'] = image_url
# Using object image_url as second one
elif 'image_url' in organization and organization['image_url']:
to_browse_obj['url'] = organization['image_url']
# Default placeholder
else:
to_browse_obj['url'] = h.url_for_static('/images/organisations/icon/placeholder-organization.png')
to_browse_organizations.append(to_browse_obj)
except (logic.NotFound, logic.ValidationError, logic.NotAuthorized) as error:
# SILENT
log.warn("Error on putting organization: %s" % error)
log.info("browse %d" % len(ordered_organizations) + " organisation/s")
except (logic.NotFound, logic.ValidationError, logic.NotAuthorized) as error:
log.error("Error on getting organizations: %s" % error)
return []
return to_browse_organizations
def get_list_of_groups(limit=10, sort='package_count'):
to_browse_groups = []
try:
data = {}
if sort:
data['sort'] = sort
data['limit'] = limit
data['all_fields'] = True
ordered_groups = []
ordered_groups = logic.get_action('group_list')({}, data)
for group in ordered_groups:
# print "\n\ngroup %s" %group
try:
to_browse_obj = {}
if not group['name']:
continue
to_browse_obj['name'] = group['name']
if 'package_count' in group:
to_browse_obj['package_count'] = group['package_count']
if 'display_name' in group:
to_browse_obj['display_name'] = group['display_name']
if 'image_url' in group and group['image_url']:
to_browse_obj['url'] = group['image_url']
else:
to_browse_obj['url'] = get_url_to_icon_for_ckan_entity(group['name'], 'group')
to_browse_groups.append(to_browse_obj)
except (logic.NotFound, logic.ValidationError, logic.NotAuthorized) as error:
# SILENT
log.warn("Error on putting group: %s" % error)
log.info("browse %d" % len(ordered_groups) + " organisation/s")
except (logic.NotFound, logic.ValidationError, logic.NotAuthorized) as error:
log.error("Error on getting group: %s" % error)
return []
return to_browse_groups
def get_browse_info_for_organisations_or_groups(type='organization', limit=10, sort_field=None):
sort = None
if sort_field:
sort = sort_field
if type == 'organization':
if sort:
return get_list_of_organizations(limit, sort)
else:
return get_list_of_organizations(limit)
elif type == 'group':
if sort:
return get_list_of_groups(limit, sort)
else:
return get_list_of_groups(limit)
return []
def get_image_display_for_group(item_id):
if item_id:
try:
item_obj = model.Group.get(item_id)
if item_obj and item_obj.image_url:
return item_obj.image_url
else:
return h.url_for_static('/images/groups/icon/placeholder-group.png')
except Exception as error:
log.error("Error on getting item obj: %s" % item_id + "error: %s" % error)
def get_application_path():
if getattr(sys, 'frozen', False):
# If the application is run as a bundle, the pyInstaller bootloader
# extends the sys module by a flag frozen=True and sets the app
# path into variable _MEIPASS'.
application_path = sys._MEIPASS
else:
application_path = os.path.dirname(os.path.abspath(__file__))
return application_path
'''
Get icon url for input entity type
@:param default_placeholder if True returns the URL of default image, otherwise None.
'''
def get_url_to_icon_for_ckan_entity(item_name, entity_type=None, default_placeholder=True):
if not entity_type or not item_name:
return None
dir_images_full_path = get_application_path() + "/public/images"
dir_images_relative_path = "/images"
if entity_type == 'group':
dir_images_full_path += "/groups"
dir_images_relative_path += "/groups"
placeholder_icon = "placeholder-group.png"
elif entity_type == 'organization':
dir_images_full_path += "/organisations"
dir_images_relative_path += "/organisations"
placeholder_icon = "placeholder-organization.png"
elif entity_type == 'type':
dir_images_full_path += "/types"
dir_images_relative_path += "/types"
placeholder_icon = "placeholder-type.png"
else:
return None
icon_path = dir_images_full_path + "/icon/" + item_name.lower() + ".png"
if os.path.isfile(icon_path):
return h.url_for_static(dir_images_relative_path + "/icon/" + item_name.lower() + ".png")
elif default_placeholder:
return h.url_for_static(dir_images_relative_path + "/icon/" + placeholder_icon)
return None
def get_user_info(user_id_or_name):
if user_id_or_name:
try:
item_obj = model.User.get(user_id_or_name)
if item_obj:
return item_obj
return None
except Exception as error:
log.error("Error on getting item obj: %s" % user_id_or_name + "error: %s" % error)
return None
'''
Search the value of my_search_string into input file {ckan_po_file} or the default file ckan.po provided as CKAN language
and returns its translate
'''
def get_ckan_translate_for(ckan_po_file, my_search_string):
my_translate = session.get(TRANSLATE_OF_ + my_search_string)
if not my_search_string:
return ""
if my_translate:
log.info("Translate of '%s' " % my_search_string + " found in session as: %s" % my_translate)
return my_translate
if not ckan_po_file:
ckan_po_file = "/usr/lib/ckan/default/src/ckan/ckan/i18n/en_GB/LC_MESSAGES/ckan.po"
numlines = 0
numfound = 0
found = 0
line_text = ""
try:
infile = open(ckan_po_file, "r")
for line in infile:
numlines += 1
if found > 0:
numfound += 1
line_text += str(line)
found = 0 # reset found
# found += line.upper().count(my_search_string.upper())
found += line.count(my_search_string)
if found > 0:
log.debug("The search string '%s'" % my_search_string + " was found. Read the line: %s" % str(line))
infile.close()
except Exception as e:
print(("Exception during parsing the file %s" % ckan_po_file, e))
log.info("Recap: '%s' was found" % my_search_string + " %i times " % numfound + "in %i lines" % numlines)
log.debug("Line text is: %s" % line_text)
pattern = '"([A-Za-z0-9_ \./\\-]*)"'
m = re.search(pattern, line_text)
try:
my_translate = m.group()
except Exception as e:
print(("Pattern %s" % my_search_string + " not found ", e))
if my_translate:
log.debug("Replacing quotas...")
my_translate = my_translate.replace("\"", "")
log.info("Found the string '%s'" % my_translate + " that translating '%s'" % my_search_string)
session[TRANSLATE_OF_ + my_search_string] = my_translate
session.save()
return my_translate
def get_location_to_bboxes():
config = configparser.ConfigParser()
config.optionxform = str
location_to_bboxes = {}
try:
bboxes_file = get_application_path() + "/public/location_to_bboxes.ini"
log.debug("bboxes_file is: '%s'" % bboxes_file)
config.read(bboxes_file)
for section_name in config.sections():
log.debug('Location to bboxes Section: ' + section_name)
# print ' Options:', parser.options(section_name)
for name, value in config.items(section_name):
location_to_bboxes[name] = value.replace(",", "%2C")
ordDictBboxes = collections.OrderedDict(sorted(location_to_bboxes.items()))
log.debug("Ordered 'bboxes_file' dict: '%s'" % ordDictBboxes)
return ordDictBboxes
except Exception as error:
log.error("Error on reading file: %s" % bboxes_file + "error: %s" % error)
def get_content_moderator_system_placeholder():
return systemtype_cms_fields_placeholders

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compose/2.10/src/ckanext-d4science_theme/ckanext/d4science_theme/plugin.py Normal file
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@ -0,0 +1,460 @@
# encoding: utf-8
from logging import getLogger
import ckan.plugins as plugins
from ckanext.d4science_theme import helpers
import ckan.plugins.toolkit as toolkit
import ckan.lib.dictization.model_save as model_save
import ckan.model as model
import ckan.lib.helpers as h
import sqlalchemy as sa
from ckanext.d4science_theme.controllers.organization import OrganizationVREController
from ckanext.d4science_theme.controllers.home import d4SHomeController
from ckanext.d4science_theme.controllers.systemtype import d4STypeController
from ckanext.d4science_theme.controllers.organization import OrganizationVREController
#from ckan.controllers.home import HomeController
from ckan.config.middleware.common_middleware import TrackingMiddleware
#from ckan.plugins import IRoutes
from flask import Blueprint, render_template
from ckan.common import (
g
)
from flask import Flask, g
from ckan.lib.app_globals import app_globals
import ckan.plugins.toolkit as toolkit
# Created by Francesco Mangiacrapa
# francesco.mangiacrapa@isti.cnr.it
# ISTI-CNR Pisa (ITALY)
log = getLogger(__name__)
d4s_ctg_namespaces_controller = None
def remove_check_replicated_custom_key(schema):
if schema is not None:
schema.pop('__before', None)
return schema
#CREATED BY FRANCESCO MANGIACRAPA FOR OVERRIDING THE package_extras_save FROM dictization.model_save.py
def _package_extras_save(extra_dicts, obj, context):
''' It can save repeated extras as key-value '''
allow_partial_update = context.get("allow_partial_update", False)
if extra_dicts is None and allow_partial_update:
return
model = context["model"]
session = context["session"]
#ADDED BY FRANCESCO MANGIACRAPA
log.debug("extra_dicts: "+ str(extra_dicts))
#print "extra_dicts: "+str(extra_dicts)
extras_list = obj.extras_list
#extras = dict((extra.key, extra) for extra in extras_list)
old_extras = {}
extras = {}
for extra in extras_list or []:
old_extras.setdefault(extra.key, []).append(extra.value)
extras.setdefault(extra.key, []).append(extra)
#ADDED BY FRANCESCO MANGIACRAPA
#print "old_extras: "+str(old_extras)
new_extras = {}
for extra_dict in extra_dicts or []:
#print 'extra_dict key: '+extra_dict["key"] + ', value: '+extra_dict["value"]
#new_extras.setdefault(extra_dict["key"], []).append(extra_dict["value"])
if extra_dict.get("deleted"):
log.debug("extra_dict deleted: "+str(extra_dict["key"]))
#print 'extra_dict deleted: '+extra_dict["key"]
continue
#if extra_dict['value'] is not None and not extra_dict["value"] == "":
if extra_dict['value'] is not None:
new_extras.setdefault(extra_dict["key"], []).append(extra_dict["value"])
#ADDED BY FRANCESCO MANGIACRAPA
log.debug("new_extras: "+str(new_extras))
#print "new_extras: "+str(new_extras)
#new
for key in set(new_extras.keys()) - set(old_extras.keys()):
state = 'active'
log.debug("adding key: "+str(key))
#print "adding key: "+str(key)
extra_lst = new_extras[key]
for extra in extra_lst:
extra = model.PackageExtra(state=state, key=key, value=extra)
session.add(extra)
extras_list.append(extra)
#deleted
for key in set(old_extras.keys()) - set(new_extras.keys()):
log.debug("deleting key: "+str(key))
#print "deleting key: "+str(key)
extra_lst = extras[key]
for extra in extra_lst:
state = 'deleted'
extra.state = state
extras_list.remove(extra)
#changed
for key in set(new_extras.keys()) & set(old_extras.keys()):
#for each value of new list
for value in new_extras[key]:
old_occur = old_extras[key].count(value)
new_occur = new_extras[key].count(value)
log.debug("value: "+str(value) + ", new_occur: "+str(new_occur)+ ", old_occur: "+str(old_occur))
#print "value: "+str(value) + ", new_occur: "+str(new_occur) + ", old_occur: "+str(old_occur)
# it is an old value deleted or not
if value in old_extras[key]:
if old_occur == new_occur:
#print "extra - occurrences of: "+str(value) +", are equal into both list"
log.debug("extra - occurrences of: "+str(value) +", are equal into both list")
#there is a little bug, this code return always the first element, so I'm fixing with #FIX-STATUS
extra_values = get_package_for_value(extras[key], value)
#extras_list.append(extra)
for extra in extra_values:
state = 'active'
extra.state = state
session.add(extra)
#print "extra updated: "+str(extra)
log.debug("extra updated: "+str(extra))
elif new_occur > old_occur:
#print "extra - a new occurrence of: "+str(value) +", is present into new list, adding it to old list"
log.debug("extra - a new occurrence of: "+str(value) +", is present into new list, adding it to old list")
state = 'active'
extra = model.PackageExtra(state=state, key=key, value=value)
extra.state = state
session.add(extra)
extras_list.append(extra)
old_extras[key].append(value)
log.debug("old extra values updated: "+str(old_extras[key]))
#print "old extra values updated: "+str(old_extras[key])
else:
#remove all occurrences deleted - this code could be optimized, it is run several times but could be performed one shot
countDelete = old_occur-new_occur
log.debug("extra - occurrence of: "+str(value) +", is not present into new list, removing "+str(countDelete) + " occurrence/s from old list")
#print "extra - occurrence of: "+str(value) +", is not present into new list, removing "+str(countDelete)+" occurrence/s from old list"
extra_values = get_package_for_value(extras[key], value)
for idx, extra in enumerate(extra_values):
if idx < countDelete:
#print "extra - occurrence of: "+str(value) +", is not present into new list, removing it from old list"
log.debug("pkg extra deleting: "+str(extra.value))
#print "pkg extra deleting: "+str(extra.value)
state = 'deleted'
extra.state = state
else:
#print "pkg extra reactivating: "+str(extra.value)
log.debug("pkg extra reactivating: "+str(extra.value))
state = 'active'
extra.state = state
session.add(extra)
else:
#print "extra new value: "+str(value)
log.debug("extra new value: "+str(value))
state = 'active'
extra = model.PackageExtra(state=state, key=key, value=value)
extra.state = state
session.add(extra)
extras_list.append(extra)
#for each value of old list
for value in old_extras[key]:
#if value is not present in new list
if value not in new_extras[key]:
extra_values = get_package_for_value(extras[key], value)
for extra in extra_values:
#print "not present extra deleting: "+str(extra)
log.debug("not present extra deleting: "+str(extra))
state = 'deleted'
extra.state = state
#ADDED BY FRANCESCO MANGIACRAPA
def get_package_for_value(list_package, value):
''' Returns a list of packages containing the value passed in input
'''
lst = []
for x in list_package:
if x.value == value:
lst.append(x)
else:
return lst
return lst
#OVERRIDING BASE SQL ALCHEMY ENGINE INSTANCE
def _init_TrackingMiddleware(self, app, config):
self.app = app
log.debug('TrackingMiddleware d4Science instance')
sqlalchemy_url = config.get('sqlalchemy.url')
log.debug('sqlalchemy_url read: '+str(sqlalchemy_url))
sqlalchemy_pool = config.get('sqlalchemy.pool_size')
if sqlalchemy_pool is None:
sqlalchemy_pool = 5
log.debug('sqlalchemy_pool read: '+str(sqlalchemy_pool))
sqlalchemy_overflow = config.get('sqlalchemy.max_overflow')
if sqlalchemy_overflow is None:
sqlalchemy_overflow = 10;
log.debug('sqlalchemy_overflow read: '+str(sqlalchemy_overflow))
try:
self.engine = sa.create_engine(sqlalchemy_url, pool_size=int(sqlalchemy_pool), max_overflow=int(sqlalchemy_overflow))
except TypeError as e:
log.error('pool size does not work: ' +str(e.args))
self.engine = sa.create_engine(sqlalchemy_url)
class D4Science_ThemePlugin(plugins.SingletonPlugin, toolkit.DefaultDatasetForm):
plugins.implements(plugins.IConfigurer)
plugins.implements(plugins.IDatasetForm)
plugins.implements(plugins.ITemplateHelpers)
plugins.implements(plugins.IFacets)
#plugins.implements(IRoutes, inherit=True)
#ckan 2.10
plugins.implements(plugins.IBlueprint)
# IConfigurer
def update_config(self, config_):
# Add this plugin's templates dir to CKAN's extra_template_paths, so
# that CKAN will use this plugin's custom templates.
toolkit.add_template_directory(config_, 'templates')
# Add this plugin's public dir to CKAN's extra_public_paths, so
# that CKAN will use this plugin's custom static files.
toolkit.add_public_directory(config_, 'public')
# Register this plugin's fanstatic directory with CKAN.
# Here, 'fanstatic' is the path to the fanstatic directory
# (relative to this plugin.py file), and 'example_theme' is the name
# that we'll use to refer to this fanstatic directory from CKAN
# templates.
toolkit.add_resource('assets', 'd4science_theme')
# toolkit.add_resource('assets', 'd4science_scripts')
#IDatasetForm
def create_package_schema(self):
# let's grab the default schema in our plugin
schema = super(D4Science_ThemePlugin, self).create_package_schema()
schema = remove_check_replicated_custom_key(schema)
#d.package_dict_save = _package_dict_save
return schema
#IDatasetForm
def update_package_schema(self):
schema = super(D4Science_ThemePlugin, self).update_package_schema()
schema = remove_check_replicated_custom_key(schema)
return schema
#IDatasetForm
def show_package_schema(self):
schema = super(D4Science_ThemePlugin, self).show_package_schema()
schema = remove_check_replicated_custom_key(schema)
return schema
#IDatasetForm
def is_fallback(self):
# Return True to register this plugin as the default handler for package types not handled by any other IDatasetForm plugin
return False
#IDatasetForm
def package_types(self):
# This plugin doesn't handle any special package types, it just
# registers itself as the default (above).
return []
#ITemplateHelpers
def get_helpers(self):
log.info("get_helpers called...")
'''Register functions as a template
helper function.
'''
# Template helper function names should begin with the name of the
# extension they belong to, to avoid clashing with functions from
# other extensions.
return {
'd4science_theme_get_user_role_for_group_or_org': helpers.get_user_role_for_group_or_org,
'd4science_theme_get_parents_for_group': helpers.get_parents_for_group,
'get_header_param': helpers.get_header_param,
'get_request_param': helpers.get_request_param,
'get_cookie_value': helpers.get_cookie_value,
'd4science_theme_markdown_extract_html' : helpers.markdown_extract_html,
'd4science_theme_get_systemtype_value_from_extras' : helpers.get_systemtype_value_from_extras,
'd4science_theme_get_systemtype_field_dict_from_session' : helpers.get_systemtype_field_dict_from_session,
'd4science_theme_get_namespace_separator_from_session' : helpers.get_namespace_separator_from_session,
'd4science_theme_get_extras' : helpers.get_extras,
'd4science_theme_count_facet_items_dict' : helpers.count_facet_items_dict,
'd4science_theme_purge_namespace_to_facet': helpers.purge_namespace_to_fieldname,
'd4science_get_color_for_type': helpers.get_color_for_type,
'd4science_get_d4s_namespace_controller': helpers.get_d4s_namespace_controller,
'd4science_get_extras_indexed_for_namespaces': helpers.get_extras_indexed_for_namespaces,
'd4science_get_namespaces_dict': helpers.get_namespaces_dict,
'd4science_get_extra_for_category' : helpers.get_extra_for_category,
'd4science_get_ordered_dictionary': helpers.ordered_dictionary,
'd4science_get_qrcode_for_url': helpers.qrcode_for_url,
'd4science_get_list_of_organizations': helpers.get_list_of_organizations,
'd4science_get_image_display_for_group': helpers.get_image_display_for_group,
'd4science_get_list_of_groups': helpers.get_list_of_groups,
'd4science_get_browse_info_for_organisations_or_groups': helpers.get_browse_info_for_organisations_or_groups,
'd4science_get_user_info': helpers.get_user_info,
'd4science_get_url_to_icon_for_ckan_entity' : helpers.get_url_to_icon_for_ckan_entity,
'd4science_get_ckan_translate_for' : helpers.get_ckan_translate_for,
'd4science_get_location_to_bboxes' : helpers.get_location_to_bboxes,
'd4science_get_content_moderator_system_placeholder': helpers.get_content_moderator_system_placeholder,
}
#Overriding package_extras_save method
model_save.package_extras_save = _package_extras_save
#Overriding index home controller - rimosso in ckan 2.10
#d4sHC = d4SHomeController()
# HomeController.index = d4sHC.index
#OVERRIDING BASE SQL ALCHEMY ENGINE INSTANCE
TrackingMiddleware.__init__ = _init_TrackingMiddleware
global d4s_ctg_namespaces_controller
#if d4s_ctg_namespaces_controller is None:
# log.info("d4s_ctg_namespaces_controller instancing...")
# d4s_ctg_namespaces_controller = helpers.get_d4s_namespace_controller()
# log.info("d4s_ctg_namespaces_controller instancied %s" % d4s_ctg_namespaces_controller)
#IFacets
def dataset_facets(self, facets_dict, package_type):
facets_dict = self._update_facets(facets_dict)
return facets_dict
def group_facets(self, facets_dict, group_type, package_type):
# facets_dict = self._update_facets(facets_dict)
return facets_dict
def organization_facets(self, facets_dict, organization_type, package_type):
# facets_dict = self._update_facets(facets_dict)
return facets_dict
def _update_facets(self, facets_dict):
'''Add 'metadatatype' to facets if not already present.'''
log.debug("facets_dict: ")
log.debug(', '.join(facets_dict))
metadatatype = helpers.get_systemtype_field_dict_from_session()
'''Adding system:type'''
facet_title = helpers.purge_namespace_to_fieldname(str(metadatatype['id']))
facet_title = plugins.toolkit._(facet_title.capitalize() + 's')
facets_dict = self._add_or_update_facet(metadatatype['name'],facet_title, facets_dict)
log.info("facets dict after update: " + ', '.join(facets_dict))
log.info("site_url is: " + g.site_url)
#ADD IT IN THE CUSTOMIZATION?
if g.site_url:
dev_sites = ['https://ckan-d-d4s.d4science.org']
#GRSF Catalogues. 'Status of the Record' must be distributed everywhere, see #23398
grsf_sites = ['https://ckan-grsf-admin2.d4science.org', 'https://ckan-grsf.pre.d4science.org', 'https://ckan-grsf.d4science.org', 'https://ckan-grsf-pre.d4science.org']
sbd_sites = ['https://ckan.sobigdata.d4science.net', 'https://ckan-sobigdata.d4science.org',
'https://ckan-sobigdata2.d4science.org']
if g.site_url in dev_sites:
'''Adding Status of the GRSF record'''
facets_dict = self._add_or_update_facet("StatusoftheRecord", "Status of the Record", facets_dict,
display_after_facet='groups')
facets_dict = self._add_or_update_facet("Anno", "Anno", facets_dict,
display_after_facet='groups')
elif g.site_url in grsf_sites:
'''Adding Status of the GRSF record'''
# facets_dict = self._add_or_update_facet("StatusoftheGRSFrecord", "Status of the GRSF record", facets_dict, display_after_facet='groups')
# Fixing #23348
facets_dict = self._add_or_update_facet("StatusoftheRecord", "Status of the Record", facets_dict,
display_after_facet='groups')
elif g.site_url in sbd_sites:
'''Adding the field Availability '''
facets_dict = self._add_or_update_facet("Availability", "Availability", facets_dict,
display_after_facet='groups')
return facets_dict
def init_template_globals(app):
from ckan.lib.app_globals import app_globals
app.jinja_env.globals.update(g=app_globals)
#changed to migrate to ckan 2.10:
def get_blueprint(self):
d4sHC = d4SHomeController()
d4sTC = d4STypeController()
d4sOC = OrganizationVREController()
blueprint = Blueprint('d4s', self.__module__)
rules = [
('/', 'index', d4sHC.index),
('/type', 'type', d4sTC.index),
('/organization_vre', 'organization_vre', d4sOC.index),
]
for rule in rules:
blueprint.add_url_rule(*rule)
return blueprint
# def before_map(self, map):
# """This IRoutes implementation overrides the standard
# ``/user/register`` behaviour with a custom controller. You
# might instead use it to provide a completely new page, for
# example.
# Note that we have also provided a custom register form
# template at ``theme/templates/user/register.html``.
# """
# # Hook in our custom user controller at the points of creation
# # and edition.
# #
# #map.connect('/type', controller='ckanext.d4science_theme.controllers.type::d4STypeController', action='index')
# map.connect('/type', controller='ckanext.d4science_theme.controllers.systemtype:d4STypeController', action='index')
# ''' Added by Francesco Mangiacrapa, see: #8964 '''
# organization_vre = OrganizationVREController()
# map.connect('/organization_vre', controller='ckanext.d4science_theme.controllers.organization:OrganizationVREController', action='index')
# map.connect('/organization_vre/{id}', controller='ckanext.d4science_theme.controllers.organization:OrganizationVREController', action='read')
# map.redirect('/types', "/type")
# return map
def _add_or_update_facet(self, facet_key, facet_value, facets_dict, display_after_facet='organization'):
#Updating ordering of facets_dict OrderedDict
if str(facet_key) not in facets_dict:
new_orderded_facets_dict=facets_dict.__class__()
for key, value in list(facets_dict.items()):
new_orderded_facets_dict[key]=value
# #the field 'metadatatype' will be inserted after following key
if key==display_after_facet:
new_orderded_facets_dict[facet_key]=facet_value
facets_dict.clear()
facets_dict.update(new_orderded_facets_dict)
log.debug("facets_dict ordered: ")
log.debug(', '.join(facets_dict))
return facets_dict

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<svg xmlns="http://www.w3.org/2000/svg" height="385.2" width="845.7" viewBox="0 0 845.7 385.2"><g stroke="#fff" stroke-miterlimit="10" fill="none"><path d="M179.2 85.2L0 170.5l28.1-85.3L137 12.4z"/><path d="M219.9 150l-40.7-64.8L137 12.4 219.9 50zM304 75l-84.1 75V50l150-25.3z"/><path d="M448 124.8L304 75l65.9-50.3 50 25.3zM759.2 98.4L619.9 150V50l70.3-50z"/><path d="M800 170.5l-40.8-72.1-69-98.4 137.9 85.2zM569.9 91.4L448 124.8 419.9 50l100-37.6z"/><path d="M619.9 150l-50-58.6-50-79 100 37.6zM89.6 200l-43.9 50L0 170.5l179.2-85.3z"/><path d="M294.9 282.9L89.6 200l89.6-114.8 40.7 64.8z"/><path d="M319.9 250l-25 32.9-75-132.9L304 75z"/><path d="M464.9 158.2l-145 91.8L304 75l144 49.8zM697.5 217.9l-50.9-8.8-26.7-59.1 139.3-51.6z"/><path d="M845.7 250l-148.2-32.1 61.7-119.5 40.8 72.1zM519.9 250l-55-91.8-16.9-33.4 121.9-33.4zM646.6 209.1L519.9 250l50-158.6 50 58.6zM137 312.4L28.1 385.2 45.7 250l43.9-50z"/><path d="M219.9 350L137 312.4 89.6 200l205.3 82.9z"/><path d="M369.9 324.7l-150 25.3 75-67.1 25-32.9z"/><path d="M419.9 350l-50-25.3-50-74.7 145-91.8zM690.2 300l-70.3 50 26.7-140.9 50.9 8.8z"/><path d="M828.1 385.2L690.2 300l7.3-82.1L845.7 250zM519.9 312.4l-100 37.6 45-191.8 55 91.8zM619.9 350l-100-37.6V250l126.7-40.9z"/></g></svg>
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/*!
* d4s_tagcloud.js
* D4science Tag Cloud which using Tag Cloud Plugin for JQuery
*
* jquery.tagcloud.js
* created by Francesco Mangiacrapa francesco.mangiacrapa@isti.cnr.it
*/
loadTagCloudJS = function (elementIDtoCloud, rgb_start, rgb_end) {
//console.log('start: '+rgb_start)
//console.log('end: '+rgb_end)
if(!rgb_start)
rgb_start = '#C0C0C0';
if(!rgb_end)
rgb_end = '#000066';
var script = document.createElement('script');
script.onload = function() {
/*console.log("TagCloud json loaded and ready");*/
$.fn.tagcloud.defaults = {
size: {start: 13, end: 20, unit: 'px'},
color: {start: rgb_start, end: rgb_end}
}
$('#'+elementIDtoCloud +' a').tagcloud();
};
script.type = "text/javascript";
script.src = "jquery.tagcloud.js";
document.getElementsByTagName('head')[0].appendChild(script);
}
loadCloud = function (elementIDtoCloud, rgb_start, rgb_end) {
if(!window.jQuery){
var script = document.createElement('script');
script.onload = function() {
/*console.log("JQuery loaded and ready");*/
loadTagCloudJS(elementIDtoCloud,rgb_start,rgb_end);
};
script.type = "text/javascript";
script.src = "https://code.jquery.com/jquery-1.11.0.min.js";
document.getElementsByTagName('head')[0].appendChild(script);
}else {
loadTagCloudJS(elementIDtoCloud,rgb_start,rgb_end);
}
/*SHUFFLE TAGS*/
var cloud = document.querySelector('#'+elementIDtoCloud);
if (cloud == null)
return;
for (var i = cloud.children.length; i >= 0; i--) {
cloud.appendChild(cloud.children[Math.random() * i | 0]);
}
}

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